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Homology
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: D8LCF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF4_ECTSI) HSP 1 Score: 501 bits (1291), Expect = 2.940e-162 Identity = 399/790 (50.51%), Postives = 461/790 (58.35%), Query Frame = 2
Query: 329 QQWWLARISPLRFMVGCVLYILHNTLTFLYVSGSLPQAE----------GV-AEGDASVTQIEILLPYVIGALFGVGYGSVVAARGGVXXXXXXXXXXXXGHHMNGSTADGTNEE---MQMRMQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALNRDPSTADSRSCIDSRTGXXXXXIGAAVVTNGNHASNGVDGEQRLPATVAAEAGAEAAAAGRVEEREPRVSSVATRETSASRVTFEDGANRLGMGSRSGERLSS---------SLSPTRFALLQAPETGTG-----------EXXXXXXXXXXXXXXGGVVG-PKIPLPLLSQVPSFDWSAASDADXXXXXXXXGGWGQ-VVVKPVKVARYDKETRRWSKTMLSLPELRKIILTRAEKTPQKVTYRRAATLGLFATTLLPVVFTIFKMVATAWANTDSDEDSTLGSMDNYQPPEAPLSFSSDTVAAAVAAAAAVLPGEAAGSD---PISSMLGGGAAGAEGAKLEAWTWMALERAVRAGATLIMRGLRPASGDGAAMAIAAVSACSVTFLAWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAILSEVVSRDARFLSSLVHWELLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKVISFK 2581
Q+ +++I L+F +GC LY+LHN +LYV G LP A+ G+ AEG V +EILLPYVIG LFG+GYGSVVAA G G GS D T + XXXXXXXXXXX XXXX XXXXX + + E A GRV R ++ +E + S G N +G G SG ++ + P R + G+G XXXXXXXXXXXXXX V G P L L+ Q +D + A D + GWGQ VVVKPVKV+ +DK R SK +LSL +LR I+ RAE TPQK TY RAA LG+FAT LPV+FT+ VA AW N + + G T +A+ A A L G G GGGAA +LE AL R A L R LRP +GD AA A+A VS CSV+F A PTFRAL DAERTYQRRYMYSKYFCALTSSQRARKHR+P FSLKNVANIRVWLALRAGKTWLRRHRRER ADAVVS +FFLSLAL+AAILSE +SR++RFLS++VHWELLVWCC ISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLR+LQN +E+ K KRERL VS+NVLKLATKLLKE+ GP+KLSGL+MNPVLYNVTRVVLVSALSGVMSDTLGF++KLWKVISFK
Sbjct: 30 QRQRISQIPRLQFFLGCALYVLHNACAWLYVRGCLPPAQWRLQQQPSWGGLGAEGGNHVMHVEILLPYVIGFLFGIGYGSVVAAGGWEALRVPADPSDTAGP--TGSAGDRTGGDGXXXXXXXXXXXXXXXXXXXXKTEFSFAAQVCAWDSRAEEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSKEGAGTTARGGRV--TRSRARNIGFKEVADS----GGGENTVGGGGASGSAPAALDPVGDAARASGPVRCDKPGSSTEGSGGTATTSXXXXXXXXXXXXXXXXXXXXXSVSGEPLRRLSLVHQPTRYDGTEAEDDEDDEEGGY--GWGQQVVVKPVKVSLWDKRGLR-SKALLSLNQLRACIIERAESTPQKATYHRAAKLGVFATVCLPVLFTLCTTVAYAWINAGAADGGGGG-----------------TASASQACATPSLVGPEEGESFEGECGVYHGGGAAACGRLRLEELALAALWRTAAAVWALASRALRPEAGDWAAAAVAVVSLCSVSFFAVPTFRALEDAERTYQRRYMYSKYFCALTSSQRARKHRIPHFSLKNVANIRVWLALRAGKTWLRRHRRERKADAVVSSAFFLSLALLAAILSEAISRESRFLSTVVHWELLVWCCFISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRVLQNTSNKEA-SKKVIKRERLGVSTNVLKLATKLLKELDGPNKLSGLSMNPVLYNVTRVVLVSALSGVMSDTLGFSVKLWKVISFK 790
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: A0A6H5KWE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE6_9PHAE) HSP 1 Score: 417 bits (1073), Expect = 3.900e-135 Identity = 251/398 (63.07%), Postives = 281/398 (70.60%), Query Frame = 2
Query: 1463 GLFATTLLPVVFTIFKMVATAWANTDSDEDSTLGSMDNYQPPEAPLSFSSDTVAAAVAAAAAVLPGEAAGSDPISSMLGGGAAGAEGA-KLEAWTWMALERAVRAGATLIMRGLRPASGDGAAMAIAAVSACSVTFLAWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAILSEVVSRDARFLSSLVHWE------------------------LLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKVISFK 2581
G+FAT LPV+FT+ A AW N + + G+ T + A A V P E + + GG A A G +LE AL RA A L R LRP +G+ AA A+A VS CSV+F A PTFRAL DAERTYQRRYMYSKYFCALTSSQRARKHR+P FSLKNVANIRVWLALRAGKTWLRRHRRER ADAVVS +FFLSLAL+AAILSE +SR++RFLS++VHWE LLVWCC ISFFLLRYLTLGSNTNNRYRDTSVLLTE INVQLRILQN +E+ K KRERL VS+NVLKLATKLLKE+ GP+KLSGL+MNPVLYNVTRVVLVSALSGVMSDTLGF++KLWKVISFK
Sbjct: 20 GVFATVFLPVLFTLCTTAAYAWINAGAADGDGGGTA---------------TASQACATPPLVGPEEVESFEGECGVYHGGGATACGRLRLEELALAALWRAAAALCALASRALRPEAGEWAAAAVAVVSLCSVSFFAVPTFRALEDAERTYQRRYMYSKYFCALTSSQRARKHRIPHFSLKNVANIRVWLALRAGKTWLRRHRRERKADAVVSSAFFLSLALLAAILSEAISRESRFLSTVVHWEVGALVEALGRKLCACFYFSGCCFELLVWCCFISFFLLRYLTLGSNTNNRYRDTSVLLTELINVQLRILQNTSNKEA-SKKVMKRERLGVSTNVLKLATKLLKELDGPNKLSGLSMNPVLYNVTRVVLVSALSGVMSDTLGFSVKLWKVISFK 401
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: A0A067CBV3_SAPPC (Phtf-FEM1B_bdg domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBV3_SAPPC) HSP 1 Score: 239 bits (611), Expect = 3.790e-65 Identity = 129/251 (51.39%), Postives = 179/251 (71.31%), Query Frame = 2
Query: 1832 AIAAVSACSVTF-LAWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAI----LSEVVSRDARFLSSLVHWELLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKV 2569
A+AA+S TF LA F ALADAE TY RR++Y+K F ALTS++R+R LP F LKNV NI+ WL+LR G++WL+R R+R+AD +VS SF + L +A + +SE + A S+LVH E+ +WC SFFLLR++ LGSN N +Y++TS+LLTEQ+NV L++L K+E+LL+S+NVLKLA+KLLKE++ P+K+SGL MNP+LYN+TRVV++SA S +S+ GF +KLWK+
Sbjct: 380 AVAALSCTVATFILASLIFSALADAEVTYHRRFLYAKCFTALTSARRSRASHLPHFRLKNVVNIKAWLSLRGGRSWLKRQGRQRAADEIVSTSFLIVLLFLAVMGVQAVSETLPSSASLFSTLVHTEVTLWCLLSSFFLLRFMMLGSNINRKYQNTSLLLTEQMNVYLKLLMT----------PHKKEKLLISNNVLKLASKLLKELNSPNKISGLTMNPLLYNITRVVVLSAFSSALSEMFGFKLKLWKM 620
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: A0A5D6XT79_9STRA (Phtf-FEM1B_bdg domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XT79_9STRA) HSP 1 Score: 237 bits (605), Expect = 3.370e-64 Identity = 131/258 (50.78%), Postives = 182/258 (70.54%), Query Frame = 2
Query: 1811 SGDGAAMAIAAVSACSVTFL-AWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAILSEVVSRDARFLS--SLVHWELLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKVIS 2575
+G A I AVS T+L A+ F ALADAE TY RR++Y+K F ALTSS+R+R +LP F LKNV NI+ W+ALR G+TWL+R R+R+AD +VS SF ++L ++ + + VS + + SL+H E+ +WC S F+LR++ LGSN N +Y++TS+LLTEQ+NV LR+L K K+E+LLVS+NVLKLA+KLLKE++ P+K+SGL MNP+LYN+TRVV++SA S S+ GF +KLWK+ S
Sbjct: 387 TGVNAGPVIVAVSCMLSTYLLAFIIFSALADAEVTYHRRFLYAKCFTALTSSRRSRLMKLPHFRLKNVVNIKAWIALRGGRTWLKRQGRQRAADEIVSTSFLINLVMLVVMGMQAVSEGSGTIQQQSLIHIEVTMWCLLSSVFMLRFMMLGSNINKKYQNTSLLLTEQMNVYLRLL----------VKPHKKEKLLVSNNVLKLASKLLKELNSPNKVSGLTMNPLLYNITRVVVLSAFSSTASEFFGFKLKLWKMKS 634
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: W2JSV7_PHYPR (Phtf-FEM1B_bdg domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2JSV7_PHYPR) HSP 1 Score: 236 bits (603), Expect = 3.680e-64 Identity = 127/240 (52.92%), Postives = 173/240 (72.08%), Query Frame = 2
Query: 1856 SVTFLAWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAILSEVVSRDARFLS--SLVHWELLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKV 2569
S +LA F ALADAE TY RR++Y+K F ALTSS+R+R +LP F LKNV NI+ W++LR G+TWL+R R+R+AD +VS SF + L L+ + + VS + LS S+VH E+ +WC S F+LR++ LGSN N +Y++TS+LLTEQ+NV LR+L +K K+E+LLVS+NVLKLA KLLKE++ P+K+SGL MNP+LYN+TRVV++SA S SD GF +KLWK+
Sbjct: 377 STYYLASIIFAALADAEVTYHRRFLYAKCFTALTSSRRSRLAKLPHFRLKNVVNIKAWISLRGGRTWLKRQGRQRAADEIVSTSFLIILVLLVVMGMQAVSDGSGSLSPESIVHIEVAIWCMLSSVFMLRFMMLGSNINKKYQNTSLLLTEQMNVYLRLL----------AKPHKKEKLLVSNNVLKLACKLLKELNSPNKVSGLTMNPLLYNITRVVVLSAFSSTASDFFGFKLKLWKL 606
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: K3WL33_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL33_GLOUD) HSP 1 Score: 233 bits (593), Expect = 4.230e-64 Identity = 127/254 (50.00%), Postives = 180/254 (70.87%), Query Frame = 2
Query: 1820 GAAMAIAAVSACSVTFLAWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAILSEVVSRDARFLSS--LVHWELLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKVIS 2575
GA++ + C+ T LA+ F ALADAE TY RR++Y+K F LTSS+R+R +LP F LKNV NI+ W++LR G+TWL+R R+R+AD +VS SF ++L L+ + + VS +A + L+H E+ +WC S F+LR++ LGSN N +Y++TS+LLTEQ+NV LR+L K K+E+LLVS+NVLKLA+KLLKE++ P+K+SGL MNP+LYN+TRVV++SA S S+ GF +KLWK+ S
Sbjct: 231 GASIIALSCMLCTYT-LAFIIFSALADAELTYHRRFLYAKCFTGLTSSRRSRLMKLPHFRLKNVVNIKAWISLRGGRTWLKRQGRQRAADEIVSTSFLINLVLLVIMGMQAVSENAGTMQQQKLIHVEVTMWCLLSSAFMLRFMMLGSNINKKYQNTSLLLTEQMNVYLRLL----------VKPHKKEKLLVSNNVLKLASKLLKELNPPNKVSGLTMNPLLYNITRVVVLSAFSSTASEFFGFKLKLWKMKS 473
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: A0A835ZHP8_9STRA (Phtf-FEM1B_bdg domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP8_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.230e-63 Identity = 131/260 (50.38%), Postives = 179/260 (68.85%), Query Frame = 2
Query: 1838 AAVSACSVTFLAWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAILSEVVSR-DARFLSSLVHWELLVWCCCISFFLLRYLTLGSNTNNR---------------YRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKV 2569
A VS +V +++WP F LA E Y+RRY Y+KY+ ALTSS+RARK+ LP F LK+ A IR WLALRAG++WLRR R +R ADA+VS +F L + L++ I E +++ +A+ + ++HWELL W + +F+LR+ +LGS TN+R Y DTSVLLTEQINVQLRIL N+ E + + K VS+ VL LATKLLKE+ P+K+SG+ MNP+L NV R+VL+SALS +MS+TLGF +K+ K+
Sbjct: 360 AGVSLLAVAYISWPIFLELAATELVYRRRYKYAKYYMALTSSRRARKYGLPHFPLKSPATIRAWLALRAGRSWLRRRREQREADAIVSAAFCLLVGLLSVIAFEALAKPEAKVMGKMLHWELLAWSFPLGYFVLRFASLGSRTNDRRVSQHLAQRVLFVHVYCDTSVLLTEQINVQLRILHNSARPEGPDKQ--KAINYQVSNQVLSLATKLLKELDSPNKISGIRMNPMLVNVIRIVLLSALSAIMSETLGFKLKIVKL 617
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: A0A0P1B782_PLAHL (Homeodomain transcription factor 2 isoform x3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B782_PLAHL) HSP 1 Score: 235 bits (599), Expect = 1.470e-63 Identity = 126/240 (52.50%), Postives = 172/240 (71.67%), Query Frame = 2
Query: 1856 SVTFLAWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAILSEVVSRDARFLS--SLVHWELLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKV 2569
S +LA F ALADAE TY RR++Y+K F ALTSS+R+R +LP F LKNV NI+ W++LR G+TWL+R R+R+AD +VS SF + L L+ + + VS + S S+VH E+ +WC S F+LR++ LGSN N +Y++TS+LLTEQ+NV LR+L +K K+E+LLVS+NVLKLA KLLKE++ P+K+SGL MNP+LYN+TRVV++SA S SD GF +KLWK+
Sbjct: 382 STYYLASIIFAALADAEVTYHRRFLYAKCFTALTSSRRSRLAKLPHFRLKNVVNIKAWISLRGGRTWLKRQGRQRAADEIVSTSFLIILVLLVVMGMQAVSEGSTSPSYESIVHIEVAIWCMLSSVFMLRFMMLGSNINKKYQNTSLLLTEQMNVYLRLL----------AKPHKKEKLLVSNNVLKLACKLLKELNSPNKVSGLTMNPLLYNITRVVVLSAFSSTASDFFGFKLKLWKL 611
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: A0A1V9Z6U2_9STRA (Homeodomain transcription factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6U2_9STRA) HSP 1 Score: 234 bits (596), Expect = 3.670e-63 Identity = 124/245 (50.61%), Postives = 173/245 (70.61%), Query Frame = 2
Query: 1853 CSVTFLAWPT--FRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAI----LSEVVSRDARFLSSLVHWELLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKV 2569
C+ T L + F ALADAE TY RR++Y+K F ALTSS+R+R LP F LKNV NI+ WL+LR G++WL+R R+R+AD +VS SF + L +A + +SE + S+LVH E+ +WC SFFLLR++ LGSN N +Y++TS+LLTEQ+NV L++L K+E+LL+S+NVLKLA+KLLKE++ P+K+SGL MNP+LYN+TRVV++SA S +S+ GF +KLWK+
Sbjct: 375 CTATTLVLASLIFSALADAEVTYHRRFLYAKCFTALTSSRRSRASHLPHFRLKNVGNIKAWLSLRGGRSWLKRQGRQRAADEIVSTSFLIVLLFLAVMGVQAVSETLPNSPSLFSTLVHTEVTLWCLLSSFFLLRFMMLGSNINRKYQNTSLLLTEQMNVYLKLLIT----------PHKKEKLLISNNVLKLASKLLKELNSPNKISGLTMNPLLYNITRVVVLSAFSSALSEMFGFKLKLWKM 609
BLAST of mRNA_H-paniculata_contig1321.2013.1 vs. uniprot
Match: A0A7S2R9Z1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9Z1_9STRA) HSP 1 Score: 236 bits (601), Expect = 7.120e-63 Identity = 128/238 (53.78%), Postives = 173/238 (72.69%), Query Frame = 2
Query: 1868 LAWPTFRALADAERTYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWLRRHRRERSADAVVSMSFFLSLALIAAILSEVVSRD-ARFLSSLVHWELLVWCCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRESKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLVSALSGVMSDTLGFNIKLWKVISF 2578
L+W A DAERT QRR Y+K+F ALTSS RAR+ +LP F+LK++ NI+VWL+LRAG+ +L++ R+R DAVV+++F+ +AL+ ++ E S + F S+LVHWELL W IS +LLR++ LG N RYR+ SVLLTEQ+NVQLRIL SR + KRERL +SS VL+LA KLLKE P+++SGLAM+PV+YNVTRV+L SALS MS+ +GF++K+WK+ F
Sbjct: 502 LSWVILSAFTDAERTLQRRLAYAKFFTALTSSGRARRLQLPHFTLKHIHNIKVWLSLRAGRDYLKQFWRQRVTDAVVTLTFYGFIALMVVVVVEFFSTENPHFPSTLVHWELLTWWLVISVYLLRFMMLGIRINRRYRNFSVLLTEQMNVQLRILA------SRPEEKEKRERLAISSKVLELAIKLLKEFESPNQISGLAMDPVVYNVTRVILFSALSAAMSELMGFDVKMWKLKGF 733
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 506.9 |
| Seed ortholog evalue | 1.8e-140 |
| Seed eggNOG ortholog | 2880.D8LCF4 |
| Preferred name | PHTF1 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005794,GO:0005801,GO:0006355,GO:0006357,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0012505,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046983,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 |
| EggNOG free text desc. | transcription, DNA-templated |
| EggNOG OGs | 28I6J@1,2QQGQ@2759 |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-26_004810.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 9 |
| Model size | 2600 |
| Cds size | 2475 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1321.2013.1 >prot_H-paniculata_contig1321.2013.1 ID=prot_H-paniculata_contig1321.2013.1|Name=mRNA_H-paniculata_contig1321.2013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=825bp
MFAHKHSGTSGAKDGSRQQDEPMPPSSPPLRAADSEYFDLNVIQGVVSTN
TKPFKDRVLVWIGFWKVLLLPLYQQWWLARISPLRFMVGCVLYILHNTLT
FLYVSGSLPQAEGVAEGDASVTQIEILLPYVIGALFGVGYGSVVAARGGV
APGMITGAAGGAGHHMNGSTADGTNEEMQMRMQEEEDRHMSDDDYDEEEE
EEMGLSGSSIEYGGGGGGGGALNRDPSTADSRSCIDSRTGGGGGGIGAAV
VTNGNHASNGVDGEQRLPATVAAEAGAEAAAAGRVEEREPRVSSVATRET
SASRVTFEDGANRLGMGSRSGERLSSSLSPTRFALLQAPETGTGEGSSGG
GGGGGSGWGGGVVGPKIPLPLLSQVPSFDWSAASDADDEDDDEDDGGWGQ
VVVKPVKVARYDKETRRWSKTMLSLPELRKIILTRAEKTPQKVTYRRAAT
LGLFATTLLPVVFTIFKMVATAWANTDSDEDSTLGSMDNYQPPEAPLSFS
SDTVAAAVAAAAAVLPGEAAGSDPISSMLGGGAAGAEGAKLEAWTWMALE
RAVRAGATLIMRGLRPASGDGAAMAIAAVSACSVTFLAWPTFRALADAER
TYQRRYMYSKYFCALTSSQRARKHRLPFFSLKNVANIRVWLALRAGKTWL
RRHRRERSADAVVSMSFFLSLALIAAILSEVVSRDARFLSSLVHWELLVW
CCCISFFLLRYLTLGSNTNNRYRDTSVLLTEQINVQLRILQNNRGQESRE
SKASKRERLLVSSNVLKLATKLLKEISGPSKLSGLAMNPVLYNVTRVVLV
SALSGVMSDTLGFNIKLWKVISFK* back to topmRNA from alignment at H-paniculata_contig1321:5358..20356- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1321.2013.1 ID=mRNA_H-paniculata_contig1321.2013.1|Name=mRNA_H-paniculata_contig1321.2013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14999bp|location=Sequence derived from alignment at H-paniculata_contig1321:5358..20356- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATCACTACGCTTGAGAAGTGTTATCATAATTAAATCATTTTTTGTATGT
AACTGTCTGTTGTGTTACATTCTTTTTGGCAACGACCCACGCCACCCCGG
CCAGGCGTCATGTTCGCTCATAAACACTCTGGGACGAGCGGTGCGAAAGA
TGGCTCTCGGCAACAAGACGAACCGATGCCACCATCCTCACCACCTCTCC
GGGCTGCAGATTCCGAGTACTTCGACTTGAACGTGATTCAAGGGTGAGTG
AGAGCGTTGTTGAGAAAAAGCACATTGGTGCTCTGGTAAGTTGTGCGTGG
TAGACACTAAAGCCCATTAGTATCCTATTCCGCGGCTCACTTACCCGACG
AGGGCACCATGCCATGGATTCACAGCGCTGAAAACAAGCAAGTGGTTAGA
TATTGCTGTTTGTCAAATAGAGCGGCTTCCCAAGATGTCATGTGAATTTT
TCGAGATAGATGTTCGCGAAGTGTCGTTGCAGAGTTCACGACAGATCATG
TTACACACAACATGTGCAACTCGATTTGAGTGTGACTCTCCTGCTTTCGC
TCATGCCGTTGTTAATGTGCCCGGGTGCATGATGTCAAGAGTTGTATCAA
CGAACACCAAGCCATTCAAGGACCGGGTGCTCGTCTGGATCGGCTTCTGG
AAGGTCCTCCTGCTCCCATTATACCAACAATGGTGGCTGGCAAGGGTAAG
GTGCTGAAAATGTGGACTTCAACGTGCTTAGTTAACGGAGATAGCACTGT
GTTGCACTGTCTGTAGCAAATCGACGCTTGAATATTATTAGTGACTAACT
GTCCTCTGTTGTACACCTGTTTACAGTACAGATGGATCATATTTGGCCAT
CCTGTCTGTCTCTGCGTGCGAAGTGGCCATGAACAAAGCATTTCTGGTCG
TGGCCAACCGTAGTTGATCCACGCCCCAGACCATGTATCCTCCCTGACTT
GAACTTACTCAAGCAGGATACATCCCTACAAGAAAAGTGCTCCAGGGGCA
ACTGTTTGCCACTTTCATGGTACGTACATTTTTGATAAAGTCACGAAAGG
AAATTCACAGAATGCCTTATGCGGGATCGGTTTGCGAAGACTCTTTCTCT
AGTGTAAGATTGGATTTGCTTGCCAACAGCCAAGTTCGAGTCTGCACATT
GTCGGAAGGCAAACGTAATAAATCAATCCGATGTGCACTTCAATCTTAAG
CAGCTCCTCATCGAGTGGATGTGTATTGTATCGATGCATTCATTTAATAT
ACTGTACAGCAATACGTACGCGCCTACATTTGTACGATATAGCGGTTTCC
AAAAGAGAGCACCACACAGGTGTCGGTTAGAAGAGGGTCGCATTGCAGCA
GAGTGCAGTGCGCAGAGCGAAAATGTGCATTATTTTCAGTCGGAAGAGGC
CCACAGTTTTTCGCGGCATCTTCAGCTGTGGTCAATTGAAGTGAAACAGG
TGAAATACATGGAGATAAATAAATAATACATGCAGAGAAGGTGCAACCGA
CCACCGGCCGTATGACGGATAATCGTGATCTGTGATCAGTCACCTAATAC
AGATCGCGTACATTGGATACAGTATCGCGAATCCTTTTTGTGCGTCTGTT
TTATGTAATTGTTTTCCCACATGCATCATTCACGTGTGCTCTTCTTACGA
AATACGATGAAACACATACATCTTCCACCCGACGAGCAGTGGCTCTTGTG
GCTAGCGTCTGGGGATGCAGGGAGCGAGGACACCGCGTATTGACCTCCTC
GTCCTTACTTGACGCCCTTCGGTATTTCTCGGTTGGTTCCAAACCATCAC
GATTGCCGGTCGAACCTAAAAAATGCTTTGGTGTATGCCATAACCTGTCT
TGACTGACTGTAGTCTTGTTGATTGTCTCCATCTACACATGGTGTACAGG
GATCTTGATCTTAGAAGTCGACGTCAAATCGTGCACATCAATGCATGATA
CGCCGAATGTTTCGTGGGTTTCATTTTGCCGGACCGGAATCTAAGCCGAT
GGTTCATGAGGGGGGGGCAACTTCTGACTCAACTATGACTGCAGAATAAG
TAGTTTCGACAATTTTGAGCTATTTGAAAAAAAAGTCTCAAATCGATACT
AACGGTCTATACATATATAGCATATAGCCAGTGAGAATCTTCGTCTTTCT
TTCGACCCCGGTATATGCAACCTCTGTTTACATACCTCGTAAGCGTTGTG
AGGGAAGGAGCTTAATCCCACGACTAAGTATCAAGTACGAAGCCCCGATT
TAGAATCTTCTTCTCGAGATTCGTATGTATTTATGCACAACAGTTGACAT
GACGATAGTACGATCGTATGCTCTGCTGACCGTTTACATCGGGAATTTTT
CGCGCCTCACGTCACACTAGTTAGTTCTCAGACATTGGATTCGGTTGGTG
AAGATTGAAGACTTGTAATTTAGGCCACATTTAAGCGCTCAGGTACCGAT
ATGTGGTGGTTGACAACCTGTTTTTATTCAAACTTTCCGCTCATCTTGTT
TTAGATTCGAAGGATTCAGGTTGTTGTATTAACCCTTGCCACCTCGGAAT
CCCATCACCTCGAAGACAGCAGGGAAGGACAACGGATACTGTTCATGGCA
TGTTTAAGGAGATAGGGAGCCATCGCTGTTCAGACAGACACATGAAACAC
AGAAATGGTCGGCACCGTTCTGCCCACAACGAATGAGTGCAGTAGCGCTC
GACATTTAATTATTCTCACATGTCATTCTTGTTCTGGAACGGCATGTAGC
GGGGGGGGTAAAAGGGTTGACGGTAAAGGAAAAAATCGAAATTAAATTTG
AAAATTTGAAAATTAGTCAATTTGGCCTCCTCCTCCTCCTCCTCCTCTTC
CTCTGTAACATCTGTGATTGGCCAGTATGCATATGACCACCCCGGTTCCG
AGGTGTGGTCGTATGCGTACTGATCAATCATAAAAGTACTATTATGAGCA
ACGTTTAGTTTTGTCATTGCTTTTCTCTTCCCCTTTTTTGTTCAGTTACG
CTTACATTCATTACTGTCGCTTATGGGGCAAACCAACCGTTGGTCATTTT
AGAGGGGACTAATCACGTCTTCTACGTGATGCGCCTCTACTACCAGTATC
CATTATTTAACTTTGCGCCATAATAAAGAGTGTTCTCGTTTTTTTTGTTT
TTTTTTGTATCTGCATATAAAATGGGTACCATTGAGGAAAGCAGTGTTCT
GAAAGTACCACGATAAAGCGACACTCCTTGGGAACAAGATCTCGGTGGAA
TTTTTTTTCAAAGTCCAAGTGCCCGTTATGTTATTCCCAAAATACCGAAT
ACCGAATACCATTTGTTACCTACCTCTTGGACTTTGAAAAAAAAAAGCCC
AGCTATTGTTCCCATGGAGTCTATAGCTTTATATTGGTACTTGTAGAATT
CTGGTTTCCTCAATGGTACCATTTTTATACGCTGTTAAAAGAAAAAAAAC
GAAAACATTGCTGATAATGTCAAGATTGCATTTAAAAAATAAGACCAAGA
AGCAGGCCCCAGAAAACAGGTTCTCGAGGTGTGAGGCCCCTAAGGGGTTA
TTGTAATGTCTTACGGTTACAGTTGGATACACTGCCCATCAAAAGCTAGA
ACAAAAGAAATCACAATCGTGGACGATTTGCCACGGGTTGGAAGGTAAAG
CGTGTAAGTAGGTATGGGTCAGTCTCTGTCCATTTGTCTATTTGACTGTT
TGAATGGGGGGAGGGGGGTAAAAGACAATTATTTTCACCCCACCCAAGTC
AACCCGCGTGCCATAGTTGGTAGCACTGATCTCTGACTCTCATATAATAA
CTCCACCGTACCCATGTTGAGGTCATGCAGTGCTTCAGTTGTGTACGCCT
GTTAGCAAAATTATACCAACAAGGCGATTGAATTACATTTTATCCCTCTC
GTGGTTCACACATCCTGTTCGCCGTTGCCGTCCGTCCTGCCCCCTTCTGT
TTGTTGTAAGTTTTCCTGTGAGCTAAACAAGTATATGTTTTATTGTTTCA
TACGGTAAAGTGACGGTGGTGGTGATGGTGGTAGTGATCCTCGTCATCGT
TTCGGAACAGCTTGCCAAGCCTTTTCTCAAGGTTAGCTCCTGAAAAACGA
ATTTTCGTGCGAGCGTAGCGAGTGCCTTGCTCCCTCTCCATTTTTCCCGT
TTTTTTTTCGATAGGTATAACTGAGCATGATTGTAGGGAAAATAACCAAC
AGCAGGTGACTTGCTTGTGTGTACGTACTGCAACTTATCATCATCGATAT
GAGTATTCCAACAGAAAAACGACTCTACCGGTCGGTCGGTGAGGGTTCGT
AAGGCAGATTTCATCTTTTTGAGGTAATGTTTCTTGGGCCTTACTTCCCC
GCTATCCCGCGCTTCCTCCCCCCTCTCCCTCCCGTGCTTCAGATATCTCC
GTTGCGGTTCATGGTGGGATGCGTGCTCTACATCCTGCACAACACGTTGA
CGTTCTTGTACGTGAGCGGAAGCCTGCCACAGGCCGAAGGGGTGGCCGAA
GGCGATGCAAGCGTCACACAAATCGAGGCACGAACAAATAGTAGTAGATA
TAGGGGAACAATACGGGCCGGTATGTCCACCTTGAGGCCTGGTTCACACA
GTACATTGTACAGTTAGGGGTGCGCCTAACCCCGATTTGCAGCCAAAATC
TGGTGACAGCGACCACATGGATAAAGCGACGAATAAAGAAAAAAAAAATG
TTTATCCTCTGACAGATAATGCCACCTTCGTCCCACAAAGCATTTGTATT
CAGTGTCGGGTTTCCACGCACTTGTAACCTTAACTACTCGATACAGGTTA
GGAGTTGGCTCGTGAGACTCGACACACACTGGGGTATGTGCCTTATCTAG
AGCTTGATCTTATGGGACATTTAATCCGCGTTATGAGAATTCCAAACGAC
CCAATAAATAGTGGGGTTTTTTGCTACTTTCTCTGTGAAAATGCTCCGTC
ATGACTTGATAAATTCATAAAATAAACCCATAGCTGTGGTTTTCGCGCAC
ATGACGCAAAAAACTGCATCCCAATCGACGACCTTGCTGAGAAGTGTATT
TATTGACAACATAGCCTAACACAAACAATTACCCAAACTACTCGAATTTA
AAGTGGTCAATCAACACCAAAAACGCATCCAACACTTCTCGAATATAGAG
TGCGGGAGAGGTCATCTTTTCGAACGTAAATATTCTTCACACATCTGGTT
GCTAGGGTTACGTTGAGTGGTCGTAGGGACATATTTCGCGTGGCAAATTG
CAATGGTTGTAGCTCGTTATTGTAACCAGCATTCTCTGGGTCCCAAAGCA
CTCGAAACTTAGCTTTGCTCGGCCTTTTTACGGTGTAGCTGTGAGTTGCA
CCAGTACATGATAAAAGGAGACAACGTAGTTAACACAACACCAGCAGCAC
CAGCAGCGCTTCTTTGCGCATCCTACGCCAAACCACCCTTTAATATTATC
AGGTGACGTTGGGTCTCTCCATGGTTGTGTGTGTGTTTTTTGGGGGGGTG
ACGTCAACTATATATTTTCTCTTATTTGGCCCAAACCCTCTAATAAGCCG
GCAAAAGTACGTGGTCGATGCAAAATTTTAGGACACAATTATCGCCTTAT
TCAGGACAATTCAGGAGTTAGGCGCACCCCTAACAGTATTGTCATATATA
TATAATTTGCGGCCATCTGTGCATCGCACGTGGCCATCACAACTTGCCTA
ACCTACCCCAACTCTTACCAACCCTATTTACACATATATATACATAACCC
TGCATGCGCCCCTGCATACACTCCGGCTCGATGCACAGATCCTCCTCCCT
TACGTGATCGGAGCGCTGTTCGGCGTTGGCTACGGCTCGGTCGTGGCCGC
ACGCGGCGGCGTCGCTCCAGGCATGATCACCGGCGCTGCGGGCGGGGCCG
GCCACCACATGAACGGCTCGACGGCGGATGGCACTAACGAGGAGATGCAG
ATGCGCATGCAGGAGGAGGAGGATAGGCACATGAGCGACGACGACTACGA
CGAAGAAGAGGAGGAAGAGATGGGGCTATCAGGAAGCAGTATTGAATACG
GTGGTGGTGGCGGCGGAGGAGGAGCCCTGAACCGTGACCCGAGCACCGCA
GACAGCCGCTCGTGCATTGATAGTCGAACCGGCGGGGGCGGCGGCGGTAT
AGGGGCCGCTGTGGTAACTAATGGAAACCACGCAAGCAATGGTGTTGACG
GGGAACAGAGACTGCCGGCGACAGTGGCCGCCGAGGCTGGGGCGGAAGCA
GCAGCAGCAGGAAGAGTGGAAGAAAGGGAACCGAGGGTATCGTCGGTGGC
GACCCGCGAGACTAGCGCTAGTCGTGTGACGTTCGAGGACGGCGCAAACC
GACTGGGGATGGGCTCGAGGTCTGGAGAAAGACTGTCGTCCTCGCTTTCG
CCTACACGATTCGCGTTGTTGCAAGCTCCCGAGACGGGAACAGGTGAAGG
GAGTTCCGGCGGCGGTGGCGGCGGTGGTAGTGGCTGGGGTGGGGGCGTCG
TAGGTCCGAAGATACCCCTTCCTCTTTTGTCGCAGGTTCCGAGCTTCGAT
TGGTCGGCGGCGTCGGATGCGGACGACGAGGACGACGACGAGGACGATGG
GGGATGGGGTCAGGTGGTGGTGAAACCGGTGAAGGTCGCGCGGTACGACA
AGGAGACGAGGCGGTGGTCCAAGACGATGCTGTCACTGCCGGAGCTGCGG
AAGATTATCTTGACCCGGGCCGAGAAGACCCCGCAGAAGGTCACGTACCG
ACGCGCCGCCACGCTGGTAAGAAGAGAGCAGGCGAGACGAGAGGCAGCGC
GAGAAGATGTGAAAAAACACTCGAGTTTGTCGTGCGCAATGTTTACTGTT
GTTGTTGTTGTTGTTGTTATTATTGTCGTCGTTGTTGTAGTCGTTCTGGC
GAAAGACTACGGCAGCAGGGGAGACCATTGCGGGAGGAGGCCGCTCGTTT
TTCTCTGTTGGTAATTTCCGTAGTGTGTACGGGACGTTCTTCCTGTAAAT
ACTTGCGGGGAGTATAAAGTATGACAAATGTTAGTACCTCCGTTTTTCTC
TAAACTAGATTCCTCCCTAACCCCCCCTGACTTGATGTAATTTTCTTGAT
TTAAGTGTTTACAATTGAGATACGAGGTCAGCTGCACAACCTAAACATGC
GTACATACGATGGAGTTTGTAGTTACATGGGATTTGTAGAGTTACTCACG
AACTGTGGCAGGTAAAGTTGACTCGTGAGTGCGATATGGTGGGTAAGTTT
GTTGTGCTTGTTTTATGTTAGGTGTTGACATGTAAGCAACATCAAGTTTA
CTCACACGCGAGTAATACAGTGGTAATCCCGTGTAAGGTCGCAGACCATT
TCGTACTTCACTGCCCTCTCTCCCCCCTCGTACTCCCTACTCTTTACGAG
TGCTAGTGAAAGTATGCGCAACTTCAACATACAGCCTGCGTAACCTCAGC
ATAACATGAGTAGGTACTAGAGTAAAGGACTGAAAATACTTATGTCGTTG
GTTCAAGTCCCACTCTAGACAAACGCAGAGGAATAAATAACTCTGTTCTG
TTGAAGGAAATGTAGACATACTTTGGTAAAATACTCAAGTATGAAAGCAT
CCGTACAGGTGTTTGCCTCAGCCTTCCGAAGGTTAAAAAACACACGAATG
CTTCCAAGTTTGATTTATCGATTACGAAATGGGTTAATGGCTAATCATGT
TAGTGTACCTAATTGAAGAGGCTCGTTTTTGTATTCAGTTTTTTAGTGTT
TTTTATGGGATGAAGGATGAATTCGAGGTTGTAAAAAAAATGGATAATGG
AATTAGTATTTTATTTTTCTTCTTATATTGCGGCGGGGGGTATTCTCAAA
TACAGCGTTTAATCCATCTTGTCCAAACCGAGTTGTCCCCTTTTATTTCT
TATTAAGTGTTGGGGTTATTTTTATACTACACACGATAGAGCCACGAATT
TTCTCTCGGGCTGTATCATACAGTACAGCAGTATTGCAGGTCTCCTATTC
CATCTAGCGTCGTTGAGACTAGACACAGACGGACATTACAACGTCATATG
ATCTCCGAATAACCAGCACTTTGTAATCACCCCCGTGGCTGTTCCCATCT
CGTCGTCAGCCCGTGCCTCCTGTCCCACTCCCGCCCCCTCGCTTTTTTTT
TGCTTTTTTTTACTATTGTTATGAGATGTTAATACCGGGACGTGACAGTC
ATTGTCTAAAGTGACGGTTCCGTCCCCAATCCCCGGGGTTGTGTAATGTA
GCCTCCATTGGAGTTGGAAGCGGCAAGCAAACAGTGTACCGCCCTCTCTC
GCAGCTGCCAGACTTGCCTCAACCCAAGACTGACACTGAAGAGTGCAGCA
ATAGCCAACTAATACAAGAGACCAGACCACTGAAAGGACTACAGTTACCA
CTCCAATATAACTATTCTAAGAGTACCGTACAACATAGTCAGTAACAGGA
TACAGTAACCTACGTGTGTGAGATAATCCGCAGGCCCAATTTTAGTTATC
ATGAGACTATTACGTGTAATGCCTGCACTGTTTATATGTTATCCACCAAG
TAAAACACACACCTGAACGCCGCACTTCTCGAGTTAATACTTGGAGACAG
CTATTATTAGCACACGAAAATATTTCTCCCTTCCCTCGCCTCCCCTCCCC
CCCCCTCTCCTCCTCCCAAAGGGCCTGTTCGCGACAACGCTCCTACCCGT
TGTATTCACAATCTTCAAAATGGTCGCAACAGCCTGGGCCAATACCGACA
GCGATGAGGACTCCACTTTAGGTAGTATGGATAACTACCAGCCCCCCGAA
GCACCTCTATCATTTTCGTCAGACACCGTGGCGGCGGCGGTGGCGGCAGC
GGCGGCGGTGCTACCGGGCGAGGCCGCGGGCAGCGACCCAATATCTTCCA
TGCTGGGCGGGGGCGCCGCCGGCGCGGAGGGAGCGAAGCTAGAGGCCTGG
ACTTGGATGGCATTGGAGCGGGCGGTGAGGGCCGGGGCGACGCTAATCAT
GCGCGGCTTGCGGCCGGCCTCGGGGGACGGGGCCGCGATGGCGATCGCCG
CGGTGAGTGCGTGCTCCGTGACGTTTCTGGCGTGGCCGACGTTTCGAGCG
CTGGCGGACGCGGAGCGGACGTATCAGGTGCAGTAGGAGTGGGGCAAGTA
GGGCACTCTGGATATACTCTGTGAATGTGCGAAGTGGTTGGACGCCGGGC
GGGAGGGCAGGAGGGCGGGAGGGGTCTTGTGTATTAGTTTGGGGCGAGGT
TTTTTGTTTTCTATGCAGGAATACTGTGTTCTTTTTGCCCCCCCGAGAAT
AACATTTGTTTTGTTTTGCAAGCAATAGGGGGTTCGTGTGTTTTGTATTT
TTTTTTAAAGTGAACAATGCTTGCACGATCGATGTCCACGTTGTCGCCAT
CGTTCCTCTTTCTTTTCATGTGTATGTGTGTACGGTATGCGAAAGCTGTT
TTGCTAGAGTGCGGTGCACTTGTTGTCAGCGTTGTTTTTGTTTTTTTCCC
TGGTTCACAAGAGCAGTGTTGTGGGGTTTCGCTGTGACTGTCGATGGTTT
AGATCGCTCGCGCTCTCGAGTATGTACTTGATGCTTTTAGGGCTCGTGTC
CGCTACTGGCCTTTGGTGCTCGGTTGCTCTCTGTCCCCTAACGGCGGACA
AACTAAGGTGCAGTAGCTTACGACCACATCGTACATACGGTTAGGGTACA
CCCCTCTGTCGTAGCGTTGAACGCGTTGTTTTTCTACCCACTCTGTCCAT
AAGTATAGGTACCACATTGGGAAAAACAATCCTCACGAGGCAGCACTTCG
GCTTCTCCAAAGGAGCATCAAACTGCGTTGCATATTGTGTGTTTTTTGGG
TTCGGCAGACGGGTATTCGTCGTAATCCAGCCCATTTCCCATAAAAGAAT
AAATACCTAAAAAAAACTCGTCATCCGGCAGAAGGTACGCCCCAAGAAAA
AAAACGAGATCTATATGTCCGGACAGAGTGGTATGTCTTACGAACATGTC
GGAGTTTGCAGGATTTACCTGTAATGATACCCTCGACGACGAAGGGTTTT
CTTGAACACCACGATCGGTCGGTGCCCCCATGTGACATCCATGACCTCGT
GTCTTAGGACATATCTTGTAGACGAGATCGGCCAGTCGATAGACGGGTGT
ACTCATGGTCGAGATCATACGGGTTTGAATTTGTAGAGGAAACAGAGCTT
GGGCAACAAAAAAATGTAACTCGTCGTTGGTTTCAATGTACTTCGAGTTA
TCATTTTTTTATTTCACTCCCCCACTTCGTTGGTAGACCAACCCCCCTTC
CTCTCCCCCCCCCCACCCCCCTCACACACATTGTACCCCCCTTCCAATTC
CCTGAATAGATTTGAATCTCGTTTCCCTCCCATGCGTGTAAAAATATCCC
AACGACAGCGCCGGTACATGTACTCCAAGTACTTCTGCGCGCTGACGTCC
TCTCAGCGCGCTCGCAAGCACCGTCTGCCGTTCTTCTCTCTAAAGAACGT
AGCCAACATCAGGGTGTGGCTGGCACTGCGGGCTGGGAAGACGTGGCTGC
GGCGCCACCGGAGGGAGAGGAGTGCTGACGCGGTCGTGTCCATGTCCTTC
TTCTTGTCGCTGGCGCTCATTGCTGCCATCCTCTCGGAGGTGACTTTTTC
TTTTTTTTTTGCTCCTTGCTCAATAATAGTATTCGTGTTAATATTGTACT
CCGTATAGTAATAAGGAATGTGGAGAATACGGTAAATACGTTGAATGTAG
GAAAGGATAGATAAAGATATATTCTGAATTTTCTTGCTTGAGTTATTTTT
TGTTCATGATTTTACACAATGTACTTACTTGTATAATAACGAAAAGGGAC
GATTGCCGTGAAGCGCCTGTAGAGGGGGCGCTGCAAACCTTATTTTCACA
GTTGTTTAGATAACAGATAGGGTCGGAACCCTCCGTAGCAGTAGGAATAA
TATAGTAGTGGTTGAGTGGGAACAGCGGTCTTGTTTTGTGTTCCCACCCT
GCTCGTCTGTTCGTCGTGTGTATCTGTGCGTGTGTATATGTGTGTGTGTG
TGTACCTCTGTGCGTCTGTGCATCCATGTGACGTTCTGCCTGTCTGCGTG
TCTAACTCGGCCATCATGGTTGATTTTATCATCCACTATATGTTTGCGTG
TGCATTGCCGGCATGGAGGCTTTATTCCATCATTGTTATTTGTTATTAAT
ACAATTATTATTATTTTCGAGTACTGTTTTCTTTCGTGGTCTTGTTCTTT
TTCTTCTTGTGTCTGCGTCTTTTTTTTTTTTGTACTCTTTTCCTCCACTT
GTTTTCACGATCTACTTGATTGATGACTTCGTTCTTGGCTTGCACCAGTA
CCAAGTACTCGTTGAGGTGGTGACTATGTAGACGTACATATATGCGGGAA
AACACTGGGCAAAAGCGTGCTTGAAAGTATCCCGAAAAACGAGCACCGCC
ATCATCATGGAAACACTTTACACCCCCCCCCCCCCCCCCAAGAAATACGA
ATACCTGTAAATGGTGTTAACAAAAAACGGAGAAGTGTTCGCCTGAGTTT
CAGAATGAGCGGACACATGAAATAAAATGCCCACCCCTGTCTGTTCGATT
TACGAGTATTACTAGCAATCGTGGGTGGTCCGGGGGGCACATAGAATACA
CGAGCTCATTCTGGAATTCAGGCGAATAGCCTCATTTTTTTTTGTGAAAA
CCATTTGCAGGCGTTTGTATTTGTCCGGGGGGGGTGAAAAACTTGGATAT
AGTATAGTCAGTTATACGGTCCAAATATACCACCTATCTCCTTTTCGACT
TTTATTGCAACAGATTTTTTTGTTTCCCCCCTTGTTTCCAATCTGAAGAG
AAGGACTGTTTCTTTCCCGTGCGTCCACATCATCGTTTTTTCCTGGAAAT
TTTTCAGGTGGTGAGCAGAGATGCTCGCTTCCTCTCCAGCCTTGTGCATT
GGGAGGTGAGAAAGAGCTTGCTATGTAAACAATAGTACTGTACAAGTTTT
TGTCATGTTGGATTTTAAAATATATAGAATGGATGAATATGAGGTATCCC
TTTCGCATGATATGCTGAGGTCATCGGCGTCGTTGTCGCCATTTCAGAAT
AAATTGCTCAAGCCTGTCGTCAGCAAGTAATTCCCAACGAAGCCATTTGT
GCGTGGGTCATCCATGGATTTTGATACGAAAAAAGGGGGCGTGAAGACCA
CAGTGTATGAGCTCTCCGGGCGGGTACAGTAACGGTTGACGGTATATTCG
TTGGAATCTGGCCTATTAGATTACATGCCGTTTTTTTTTTTTTTTCAGGA
ATTTCGTTTTCTGATCTCTTTTGGTACTCAGGATTTAATAGCCATCTTGC
GTTTTTATGATTTTACGGATTTCAGTACTACAAGAACAAAGTGACGTAAC
TGTGTCGCTATCTGTATTTTCTGTCGGCAGTTGGCACACTCGAGCTCTGG
AGGTGGTTGTTATAAATCGTGGTTAAGAAATAGAATGAATGGCCTCGTTT
AATGCCATCGCTGTCCTCTTTTTTGTGTGCTCACATTTTGTTGTGTATTG
CTGTTGCTGATGATGACTGGCCCAATCTGATCTGATCTGATCTGATCTGA
TCTGATGACTATTTTTCAGATGCGCGGTGTTGAAGTATAAAGCGAAATAA
CTGCATTAGTAACGTCTCAGCGCGATGAGTGAGCATCCATGCATGAGGAA
AATATCCTAATTTTCCTTTCCATATAAAAATTTATCCCCAGAGGTGGTAC
TCCTCCCTCTCTCTTGGTGTGGTTGTTTCACAGTTACTACGGTATGGTGG
TGCTGGTCGTCTTTTCGGAACATATTTTTAAATTATTTACTCTAGTAACT
TGTGGATAGTGAATCTTCTGCGCGCGAGCGCAACGAACCGTTGTGTGCAG
GTTAGAGTGTGACAGCACGGTGGTAGCCGTGGTCATACTCCATGACTCGT
GTATGTGTCTAAATACATAAGTAACCAAGTGTACATTATCCGTGTACTAC
ATATACTTATACTTAATACGTCATGTTTTTTTGTTTTTTTTATGGTTTGG
TTTTCTGCACAACAATGGGATTGAGGTCAGCACTGCTGACTGTATTATTA
TTTGCAGTATTTTTTTACGCGAGAGACAGAGTGGCATGGTGACACTCTCT
CCCCCCTCTTGTCAGGTCCAGTAAATAGTTGAATAGTTCCAGCTGACTGA
CTTTTTCCATGTCAGTAAGGGGTGTGAAGGGACGTCCGGGTATTTGTTCG
GTTTTGTGGGTGGGATGAGAGCCGTAGTACCGGAATACAAACGGTAGCCC
TCATTTCGCCCCCCCCCCTCTACTCCCCCTATTGATCCAGTTTTGCTGGC
AAGTGTACATAAGTGAAGGTTAAAGCTAGCTGCATAACCTCAATACGAGT
AAAATGGAGTTATTATATAAGTGTCAGAGCTCTAATTCAACTAAGTCGTG
GCAAGGTGTCGTCCATGTCGTGGATGTATGCCCTCCGCCCTCCTCCCTCC
AACCCGCACACACACATGCACACACACCTACCTTGAAATTTGGTCGGTTT
GTGTATGAATAGATTGGTCAGTCAGCAGTATTCTTGAAATACATGAGCCC
ATTTACGTTCTATTCTTGCTTTGACGGCTGTTGCTGTGGCGTATTTTATG
ATTTTTTAGCTACGTTGATCCCCATTCACGATATTCCAAACAGTTTTCCC
TTGGGTATGCTTTTTAGCCTAGAGTAAACCATACATTTATTGTAAGGCAA
AACAGGTTGAGCACCAACAGATACATTCTGATGCAGCGAAAAACAGGGTG
AGGAACTACACCAGCCAGTGAGGGGCTCTCCCATCTAGAAAAAGCGATGC
GGTTTGGGGGGTTTTCAAGGCCACGGGGCCACAAGGTCCATTCTTTTTGA
GCATCCGGGCCCTGCCCCCCCCCCCCCCCCCCCCCCACCCTCCCCCGCCC
AACTCCCCTTCCCATCCTTCCTCCGGCCCTGGCTTCGCTTGGCGCGTCTC
TTACTGTACACTATTTCGTGGCTCTTCGTGATGGCATTGGATGTCAATCG
CGCAAAAACATCACCTCCATGACCATCACCGTGAATAACAACAACGGAAT
CAGCTGCTGGTGTGGTGCTGCTGTATCAGCTTCTTCCTTCTTAGGTACCT
TACGCTAGGATCGAACACGAACAACAGGTATCGGGATACCAGCGTGCTGC
TCACGGAGCAGATCAACGTACAGCTCCGGATCCTGCAGAATAACCGGGGC
CAGGAGTCGAGAGAATCCAAGGTGAGACGAACAAATGAAGAATGAGAAAT
GATTGGATATATGGCATTTTGTGGGGAGTTCTTTTGGCTGTCTGGTTTTT
GAGATACGTCGCAATCCTTATTAATTAACACGGGAGTGCATTAAGTGTGG
TGGTCGTTTCGGAACATTTTTTCGAGTATTGTACTCGAGTAACTCCTGGA
AAATGAATCTTTGTGCGAGCGTAGTGAGCCACTGCGAGGGCAGCCCGTGG
GTAAAGGGCAACCACGAATTGCTCAGGGGTAGCCGTGGCTGCTCCACCAT
CTGTTGGTTCTTTCATGAGGTACTCGTGGATCGTGGTGATGATGGCGATA
TGCGCGAGCGTAGCGTAACTTGGGGATTACATGCGCCAGTGTCTCGTCAC
CATGAAGCAGCAAGTTGTCCTTTTTTCTCTTTTTTCCTTGTTATTAATTT
TCACTGTAGTAAATTACACACATGTTGCCAAATTCACTACTCACTCGAAC
GAAAACAAACGCAGGCAAGCAAGCGGGAGCGTCTGCTGGTGTCAAGCAAC
GTGCTCAAGCTGGCGACGAAGCTCTTGAAAGAGATCTCCGGCCCCAGCAA
ACTCTCGGGCCTCGCCATGAACCCAGTCCTCTACAACGTCACGCGGGTGG
TTCTCGTCTCCGCGCTGTCGGGGGTAATGAGTGACACGCTGGGCTTCAAC
ATCAAACTTTGGAAAGTTATATCATTCAAGTGATTCACCGCTTCCCATC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1321:5358..20356- >mRNA_H-paniculata_contig1321.2013.1 ID=mRNA_H-paniculata_contig1321.2013.1|Name=mRNA_H-paniculata_contig1321.2013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4950bp|location=Sequence derived from alignment at H-paniculata_contig1321:5358..20356- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCGCTCATAAACACTCTGGGACGAGCGGTGCGAAAGATGGCTCTCG
GCAACAAGACGAACCGATGCCACCATCCTCACCACCTCTCCGGGCTGCAG
ATTCCGAGTACTTCGACTTGAACGTGATTCAAGGATGTTCGCTCATAAAC
ACTCTGGGACGAGCGGTGCGAAAGATGGCTCTCGGCAACAAGACGAACCG
ATGCCACCATCCTCACCACCTCTCCGGGCTGCAGATTCCGAGTACTTCGA
CTTGAACGTGATTCAAGGAGTTGTATCAACGAACACCAAGCCATTCAAGG
ACCGGGTGCTCGTCTGGATCGGCTTCTGGAAGGTCCTCCTGCTCCCATTA
TACCAACAATGGTGGCTGGCAAGGAGTTGTATCAACGAACACCAAGCCAT
TCAAGGACCGGGTGCTCGTCTGGATCGGCTTCTGGAAGGTCCTCCTGCTC
CCATTATACCAACAATGGTGGCTGGCAAGGATATCTCCGTTGCGGTTCAT
GGTGGGATGCGTGCTCTACATCCTGCACAACACGTTGACGTTCTTGTACG
TGAGCGGAAGCCTGCCACAGGCCGAAGGGGTGGCCGAAGGCGATGCAAGC
GTCACACAAATCGAGATATCTCCGTTGCGGTTCATGGTGGGATGCGTGCT
CTACATCCTGCACAACACGTTGACGTTCTTGTACGTGAGCGGAAGCCTGC
CACAGGCCGAAGGGGTGGCCGAAGGCGATGCAAGCGTCACACAAATCGAG
ATCCTCCTCCCTTACGTGATCGGAGCGCTGTTCGGCGTTGGCTACGGCTC
GGTCGTGGCCGCACGCGGCGGCGTCGCTCCAGGCATGATCACCGGCGCTG
CGGGCGGGGCCGGCCACCACATGAACGGCTCGACGGCGGATGGCACTAAC
GAGGAGATGCAGATGCGCATGCAGGAGGAGGAGGATAGGCACATGAGCGA
CGACGACTACGACGAAGAAGAGGAGGAAGAGATGGGGCTATCAGGAAGCA
GTATTGAATACGGTGGTGGTGGCGGCGGAGGAGGAGCCCTGAACCGTGAC
CCGAGCACCGCAGACAGCCGCTCGTGCATTGATAGTCGAACCGGCGGGGG
CGGCGGCGGTATAGGGGCCGCTGTGGTAACTAATGGAAACCACGCAAGCA
ATGGTGTTGACGGGGAACAGAGACTGCCGGCGACAGTGGCCGCCGAGGCT
GGGGCGGAAGCAGCAGCAGCAGGAAGAGTGGAAGAAAGGGAACCGAGGGT
ATCGTCGGTGGCGACCCGCGAGACTAGCGCTAGTCGTGTGACGTTCGAGG
ACGGCGCAAACCGACTGGGGATGGGCTCGAGGTCTGGAGAAAGACTGTCG
TCCTCGCTTTCGCCTACACGATTCGCGTTGTTGCAAGCTCCCGAGACGGG
AACAGGTGAAGGGAGTTCCGGCGGCGGTGGCGGCGGTGGTAGTGGCTGGG
GTGGGGGCGTCGTAGGTCCGAAGATACCCCTTCCTCTTTTGTCGCAGGTT
CCGAGCTTCGATTGGTCGGCGGCGTCGGATGCGGACGACGAGGACGACGA
CGAGGACGATGGGGGATGGGGTCAGGTGGTGGTGAAACCGGTGAAGGTCG
CGCGGTACGACAAGGAGACGAGGCGGTGGTCCAAGACGATGCTGTCACTG
CCGGAGCTGCGGAAGATTATCTTGACCCGGGCCGAGAAGACCCCGCAGAA
GGTCACGTACCGACGCGCCGCCACGCTGATCCTCCTCCCTTACGTGATCG
GAGCGCTGTTCGGCGTTGGCTACGGCTCGGTCGTGGCCGCACGCGGCGGC
GTCGCTCCAGGCATGATCACCGGCGCTGCGGGCGGGGCCGGCCACCACAT
GAACGGCTCGACGGCGGATGGCACTAACGAGGAGATGCAGATGCGCATGC
AGGAGGAGGAGGATAGGCACATGAGCGACGACGACTACGACGAAGAAGAG
GAGGAAGAGATGGGGCTATCAGGAAGCAGTATTGAATACGGTGGTGGTGG
CGGCGGAGGAGGAGCCCTGAACCGTGACCCGAGCACCGCAGACAGCCGCT
CGTGCATTGATAGTCGAACCGGCGGGGGCGGCGGCGGTATAGGGGCCGCT
GTGGTAACTAATGGAAACCACGCAAGCAATGGTGTTGACGGGGAACAGAG
ACTGCCGGCGACAGTGGCCGCCGAGGCTGGGGCGGAAGCAGCAGCAGCAG
GAAGAGTGGAAGAAAGGGAACCGAGGGTATCGTCGGTGGCGACCCGCGAG
ACTAGCGCTAGTCGTGTGACGTTCGAGGACGGCGCAAACCGACTGGGGAT
GGGCTCGAGGTCTGGAGAAAGACTGTCGTCCTCGCTTTCGCCTACACGAT
TCGCGTTGTTGCAAGCTCCCGAGACGGGAACAGGTGAAGGGAGTTCCGGC
GGCGGTGGCGGCGGTGGTAGTGGCTGGGGTGGGGGCGTCGTAGGTCCGAA
GATACCCCTTCCTCTTTTGTCGCAGGTTCCGAGCTTCGATTGGTCGGCGG
CGTCGGATGCGGACGACGAGGACGACGACGAGGACGATGGGGGATGGGGT
CAGGTGGTGGTGAAACCGGTGAAGGTCGCGCGGTACGACAAGGAGACGAG
GCGGTGGTCCAAGACGATGCTGTCACTGCCGGAGCTGCGGAAGATTATCT
TGACCCGGGCCGAGAAGACCCCGCAGAAGGTCACGTACCGACGCGCCGCC
ACGCTGGGCCTGTTCGCGACAACGCTCCTACCCGTTGTATTCACAATCTT
CAAAATGGTCGCAACAGCCTGGGCCAATACCGACAGCGATGAGGACTCCA
CTTTAGGTAGTATGGATAACTACCAGCCCCCCGAAGCACCTCTATCATTT
TCGTCAGACACCGTGGCGGCGGCGGTGGCGGCAGCGGCGGCGGTGCTACC
GGGCGAGGCCGCGGGCAGCGACCCAATATCTTCCATGCTGGGCGGGGGCG
CCGCCGGCGCGGAGGGAGCGAAGCTAGAGGCCTGGACTTGGATGGCATTG
GAGCGGGCGGTGAGGGCCGGGGCGACGCTAATCATGCGCGGCTTGCGGCC
GGCCTCGGGGGACGGGGCCGCGATGGCGATCGCCGCGGTGAGTGCGTGCT
CCGTGACGTTTCTGGCGTGGCCGACGTTTCGAGCGCTGGCGGACGCGGAG
CGGACGTATCAGGGCCTGTTCGCGACAACGCTCCTACCCGTTGTATTCAC
AATCTTCAAAATGGTCGCAACAGCCTGGGCCAATACCGACAGCGATGAGG
ACTCCACTTTAGGTAGTATGGATAACTACCAGCCCCCCGAAGCACCTCTA
TCATTTTCGTCAGACACCGTGGCGGCGGCGGTGGCGGCAGCGGCGGCGGT
GCTACCGGGCGAGGCCGCGGGCAGCGACCCAATATCTTCCATGCTGGGCG
GGGGCGCCGCCGGCGCGGAGGGAGCGAAGCTAGAGGCCTGGACTTGGATG
GCATTGGAGCGGGCGGTGAGGGCCGGGGCGACGCTAATCATGCGCGGCTT
GCGGCCGGCCTCGGGGGACGGGGCCGCGATGGCGATCGCCGCGGTGAGTG
CGTGCTCCGTGACGTTTCTGGCGTGGCCGACGTTTCGAGCGCTGGCGGAC
GCGGAGCGGACGTATCAGCGCCGGTACATGTACTCCAAGTACTTCTGCGC
GCTGACGTCCTCTCAGCGCGCTCGCAAGCACCGTCTGCCGTTCTTCTCTC
TAAAGAACGTAGCCAACATCAGGGTGTGGCTGGCACTGCGGGCTGGGAAG
ACGTGGCTGCGGCGCCACCGGAGGGAGAGGAGTGCTGACGCGGTCGTGTC
CATGTCCTTCTTCTTGTCGCTGGCGCTCATTGCTGCCATCCTCTCGGAGC
GCCGGTACATGTACTCCAAGTACTTCTGCGCGCTGACGTCCTCTCAGCGC
GCTCGCAAGCACCGTCTGCCGTTCTTCTCTCTAAAGAACGTAGCCAACAT
CAGGGTGTGGCTGGCACTGCGGGCTGGGAAGACGTGGCTGCGGCGCCACC
GGAGGGAGAGGAGTGCTGACGCGGTCGTGTCCATGTCCTTCTTCTTGTCG
CTGGCGCTCATTGCTGCCATCCTCTCGGAGGTGGTGAGCAGAGATGCTCG
CTTCCTCTCCAGCCTTGTGCATTGGGAGGTGGTGAGCAGAGATGCTCGCT
TCCTCTCCAGCCTTGTGCATTGGGAGCTGCTGGTGTGGTGCTGCTGTATC
AGCTTCTTCCTTCTTAGGTACCTTACGCTAGGATCGAACACGAACAACAG
GTATCGGGATACCAGCGTGCTGCTCACGGAGCAGATCAACGTACAGCTCC
GGATCCTGCAGAATAACCGGGGCCAGGAGTCGAGAGAATCCAAGCTGCTG
GTGTGGTGCTGCTGTATCAGCTTCTTCCTTCTTAGGTACCTTACGCTAGG
ATCGAACACGAACAACAGGTATCGGGATACCAGCGTGCTGCTCACGGAGC
AGATCAACGTACAGCTCCGGATCCTGCAGAATAACCGGGGCCAGGAGTCG
AGAGAATCCAAGGCAAGCAAGCGGGAGCGTCTGCTGGTGTCAAGCAACGT
GCTCAAGCTGGCGACGAAGCTCTTGAAAGAGATCTCCGGCCCCAGCAAAC
TCTCGGGCCTCGCCATGAACCCAGTCCTCTACAACGTCACGCGGGTGGTT
CTCGTCTCCGCGCTGTCGGGGGTAATGAGTGACACGCTGGGCTTCAACAT
CAAACTTTGGAAAGTTATATCATTCAAGTGAGCAAGCAAGCGGGAGCGTC
TGCTGGTGTCAAGCAACGTGCTCAAGCTGGCGACGAAGCTCTTGAAAGAG
ATCTCCGGCCCCAGCAAACTCTCGGGCCTCGCCATGAACCCAGTCCTCTA
CAACGTCACGCGGGTGGTTCTCGTCTCCGCGCTGTCGGGGGTAATGAGTG
ACACGCTGGGCTTCAACATCAAACTTTGGAAAGTTATATCATTCAAGTGA back to top
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