mRNA_H-paniculata_contig132.2002.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.030e-37 Identity = 75/198 (37.88%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 1 PKSAAEALKSPEADKWRAVM*EEWRALVKKGTWESEGSGRLPVGRKAICTKWIFTRKPKDNGSVAR*EARLMSRGISQVKGGDFFETSAPIVRMSTSRTVFSLAAKHDFELEGKDVDAAYLNTSVEEELFVKLPLEV-----PPFSRDIPFVRRLRKSLYGLKQRGQNWNNSLDDFFVGIEAQRSTTDPCLYFSRDEE 579
P + EA++S A KW+ E ++L+ TW+ LP GRKAI KW+F K K +GS+ + +ARL+++G SQ G D+ ET P+ + ++ R + SLAAKH+ EL+ DV+ A+LN+ ++E++++++P+ + P S+ V +L+KSLYGLKQ + WN ++D F + I +S D C+Y R +E
Sbjct: 45 PSTYQEAMESDNASKWKDACESEIKSLLDNKTWDVV---ELPQGRKAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKP---VLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQDE 236
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: H3GBA2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBA2_PHYRM) HSP 1 Score: 146 bits (368), Expect = 1.400e-35 Identity = 83/210 (39.52%), Postives = 127/210 (60.48%), Query Frame = 2
Query: 581 GETDILVAVHVDDLVIA--GRREKVDEFKHNIGQSYRMKDLCSLSRVLGIEVRCDRPNDTISISPGGYIREVLERFGFDECRGVPTPVEGKVKISAPESADKPSEPKPLGARIVGSLTYASTGTRPDIAYAVYQAARRMQDPRREDFNTCKHIFRYLSTVPDLGITFSDKSNGHD---LEGFFDSDWAEDFEDRKSTTAYVFKLNGGAIS 1195
G+T + V V+VDD+ +A G K + FK ++ +Y +KD L++ LG+E+ ++ +++I IS G Y RE+LE+FG+ + V P+E V++ AP D+ SE +G L Y +T TRPD+A+ + Q +R + +P + K + RYL+ D GIT++ K + D LEG+ DSDWA D E RKSTT +VF L GGAI+
Sbjct: 167 GDTIVYVLVYVDDIFVATNGESYKEELFK-DLNDAYGLKDQGRLTQYLGVEI--EQTHESIKISQGKYAREILEKFGYQDAHAVGNPMETNVRL-APLETDEKSETSFPYREAIGMLMYLATSTRPDLAFTLGQLSRFVANPSAKHVGAVKRVLRYLAGTVDYGITYARKQDEVDEVVLEGYSDSDWANDPEQRKSTTGFVFTLAGGAIT 372
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: A0A6A3ZTI4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZTI4_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.460e-35 Identity = 82/209 (39.23%), Postives = 123/209 (58.85%), Query Frame = 2
Query: 581 GETDILVAVHVDDLVIAGRREKVDE-FKHNIGQSYRMKDLCSLSRVLGIEVRCDRPNDTISISPGGYIREVLERFGFDECRGVPTPVEGKVKISAPESADKPSEPKPLGARIVGSLTYASTGTRPDIAYAVYQAARRMQDPRREDFNTCKHIFRYLSTVPDLGITFSDKSNGHD---LEGFFDSDWAEDFEDRKSTTAYVFKLNGGAIS 1195
GET + V V+VDD+ +A E E ++ +Y +KD L++ LG+EV ++ +++I IS G Y RE+LE+FG+ + V P+E V++ AP D SE +G L Y +T TRPD+A+ + Q +R + +P + K + RYL+ + GIT++ K + D LEG+ DSDWA D E RKSTT +VF L GGAI+
Sbjct: 46 GETIVYVLVYVDDIFVATNDESYKEQLFRDLNDAYGLKDQGRLTQYLGVEV--EQTSESIKISQGKYAREILEKFGYQDAHAVGNPMETNVRL-APLEKDVKSETSFPYREAIGMLMYLATSTRPDLAFTLGQISRFVANPSAKHVGAVKGVLRYLAGTVNYGITYARKQDEVDEVVLEGYSDSDWANDPEQRKSTTGFVFSLAGGAIA 251
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: A0A4Y9ZRJ7_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZRJ7_9AGAM) HSP 1 Score: 147 bits (371), Expect = 6.570e-35 Identity = 82/195 (42.05%), Postives = 117/195 (60.00%), Query Frame = 1
Query: 1 PKSAAEALKSPEADKWRAVM*EEWRALVKKGTWESEGSGRLPVGRKAICTKWIFTRKPKDNGSVAR*EARLMSRGISQVKGGDFFETSAPIVRMSTSRTVFSLAAKHDFELEGKDVDAAYLNTSVEEELFVKLPLEVPPFSRDIPFVRRLRKSLYGLKQRGQNWNNSLDDFFVGIEAQRSTTDPCLYFSRDEEGR 585
PK+ EA+ P+ +KW + M EE+ AL+K GTWE RLP GRKAI W + K NG+ R ARL+++G SQ G DF ET +P+ R + R VF+L A + E DV +AYLN ++++E+F+ P E +I V RL KS+YGLKQ G+ WN LD + I ++S +DPC+Y+ ++ R
Sbjct: 724 PKTYREAVWGPDREKWESAMQEEYDALLKTGTWEKV---RLPAGRKAIGFCWTYKVKHDANGNPVRYRARLVAQGFSQRPGVDFNETHSPVARFESFRLVFALVACFGWLFEQVDVKSAYLNGTLDKEIFMHQP-EGFISPDEIDLVLRLLKSIYGLKQSGRVWNKVLDGELLNIGFKQSNSDPCVYYRVFKDSR 914
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: W4VRQ4_9DIPT (Putative retrovirus-related pol polyprotein from transposon tnt n=1 Tax=Corethrella appendiculata TaxID=1370023 RepID=W4VRQ4_9DIPT) HSP 1 Score: 146 bits (368), Expect = 1.780e-34 Identity = 76/188 (40.43%), Postives = 114/188 (60.64%), Query Frame = 1
Query: 1 PKSAAEALKSPEADKWRAVM*EEWRALVKKGTWESEGSGRLPVGRKAICTKWIFTRKPKDNGSVAR*EARLMSRGISQVKGGDFFETSAPIVRMSTSRTVFSLAAKHDFELEGKDVDAAYLNTSVEEELFVKLPLEVPPFSRDIPFVRRLRKSLYGLKQRGQNWNNSLDDFFVGIEAQRSTTDPCLYF 564
P++ EAL P+ ++W+ M EE+++L+ TWE E LP RK I KW+F K G+V R +A L+ +G SQ KG D+ ET +P+VR S+ R +F+LAAKH+ ++ D A+L + EE++++ P P +S D RL+K+LYGLKQ + WN LD+ + Q+ST D C+YF
Sbjct: 881 PETPEEALSRPDGNRWKMAMEEEYQSLLANDTWELED---LPENRKPIQCKWVFKTKRDATGAVDRYKALLVIKGYSQRKGVDYAETYSPVVRHSSLRYLFALAAKHNLQVHQMDAVTAFLQGDLSEEIYMRQP---PMYSTDNSKCCRLKKALYGLKQASRVWNRKLDEKLKSLGFQQSTYDTCVYF 1062
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: A0A329RB64_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RB64_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.940e-34 Identity = 84/212 (39.62%), Postives = 124/212 (58.49%), Query Frame = 2
Query: 581 GETDILVAVHVDDLVIAGRREKVDEFKHN-IGQSYRMKDLCSLSRVLGIEVRCDRPNDTISISPGGYIREVLERFGFDECRGVPTPVEGKVKI---SAPESADKPSEPKPLGARIVGSLTYASTGTRPDIAYAVYQAARRMQDPRREDFNTCKHIFRYLSTVPDLGITF---SDKSNGHDLEGFFDSDWAEDFEDRKSTTAYVFKLNGGAIS 1195
G T +L+ V+VDD+++A E+ + + + +Y +KD L++ LGIEV + +D+++I+ Y E+LE FG+ + V P+E KVK+ E AD E + + VG L Y +TGTRPD+A+AV Q +R + P + T K I RYL+ GIT+ ++ + LEG+ DSDWA D E RKSTT +VF L GGAIS
Sbjct: 97 GNTTMLILVYVDDIMVATNEEEGKKILFDDLDTAYGIKDQGLLTQYLGIEVA--QTDDSVTINQSKYAHEILETFGYSQAHAVGNPMETKVKLVPLGESEDADTSFEYR----KAVGMLMYLATGTRPDLAFAVEQLSRFVAKPSAKHVGTLKRILRYLAGTVGYGITYERANEVPSSVALEGYCDSDWANDPESRKSTTGFVFTLAGGAIS 302
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 145 bits (366), Expect = 2.020e-34 Identity = 78/192 (40.62%), Postives = 114/192 (59.38%), Query Frame = 1
Query: 1 PKSAAEALKSPEADKWRAVM*EEWRALVKKGTWESEGSGRLPVGRKAICTKWIFTRKPKDNGSVAR*EARLMSRGISQVKGGDFFETSAPIVRMSTSRTVFSLAAKHDFELEGKDVDAAYLNTSVEEELFVKLPLEVPPFSRDIPFVRRLRKSLYGLKQRGQNWNNSLDDFFVGIEAQRSTTDPCLYFSRDE 576
P + EAL SPEAD W+ M EE + TW +LP G++AI TKW+F K G++ R +ARL+ +G SQ +G D+ ET +P+VR ++ R +F++AAKHD + D A+LN ++EE+F+K P +S + V RL KSLYGLKQ + WN+ L++ + + RS D C+YF E
Sbjct: 233 PVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQP---EGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE 418
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: A0A7R9YVL0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YVL0_9CHLO) HSP 1 Score: 141 bits (356), Expect = 2.300e-34 Identity = 83/221 (37.56%), Postives = 116/221 (52.49%), Query Frame = 2
Query: 545 PTHACTSLATKRGETDI-LVAVHVDDLVIAGRREKVDEFKHNIGQSYRMKDLCSLSRVLGIEVRCDRPNDTISISPGGYIREVLERFGFDECRGVPTPVEGKVKISAPESADKPSEPKPLGARIVGSLTYASTGTRPDIAYAVYQAARRMQDPRREDFNTCKHIFRYLSTVPDLGITFSDKSNG---HDLEGFFDSDWAEDFEDRKSTTAYVFKLNGGAIS 1195
P+ A L T+ + + V VDD++IA + + +GQ + + DL + LG++++ +R TI++S Y +VLERFG +C+ P P K+S E K I+GSL Y +T TRPDI++AV AR M P KH+ RY+ + GITF G H L GF DSDW DFE ++STT YVF LNGGAI+
Sbjct: 77 PSDADAGLFTRTASDGVEAILVQVDDMLIACHAGRGADIVRQLGQFFTITDLGEATFFLGLKIKRNRELRTITLSQKRYSTDVLERFGMSDCKPKPQPFSSGTKLSKAAGTPLDPELKLCFMEIIGSLMYLATCTRPDISHAVCTLARFMAAPTYLHLEHAKHVLRYIRSSSSQGITFGVPPGGAGAHSLLGFCDSDWGGDFETKRSTTGYVFILNGGAIA 297
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: A0A034VP70_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034VP70_BACDO) HSP 1 Score: 145 bits (366), Expect = 3.030e-34 Identity = 78/192 (40.62%), Postives = 114/192 (59.38%), Query Frame = 1
Query: 1 PKSAAEALKSPEADKWRAVM*EEWRALVKKGTWESEGSGRLPVGRKAICTKWIFTRKPKDNGSVAR*EARLMSRGISQVKGGDFFETSAPIVRMSTSRTVFSLAAKHDFELEGKDVDAAYLNTSVEEELFVKLPLEVPPFSRDIPFVRRLRKSLYGLKQRGQNWNNSLDDFFVGIEAQRSTTDPCLYFSRDE 576
P + EAL SPEAD W+ M EE + TW +LP G++AI TKW+F K G++ R +ARL+ +G SQ +G D+ ET +P+VR ++ R +F++AAKHD + D A+LN ++EE+F+K P +S + V RL KSLYGLKQ + WN+ L++ + + RS D C+YF E
Sbjct: 752 PVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQP---EGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE 937
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 144 bits (364), Expect = 5.990e-34 Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 1 PKSAAEALKSPEADKWRAVM*EEWRALVKKGTWESEGSGRLPVGRKAICTKWIFTRKPKDNGSVAR*EARLMSRGISQVKGGDFFETSAPIVRMSTSRTVFSLAAKHDFELEGKDVDAAYLNTSVEEELFVKLPLEVPPFSRDIPFVRRLRKSLYGLKQRGQNWNNSLDDFFVGIEAQRSTTDPCLYFSRDEEG 582
P+S AEA SPE +W + E+ L GTWE + LP R A+ KW+F RK G V + +ARL+++G SQ+ G DF ET AP+VR+ + R + +LA +++E+ DV AYLN ++EE++++ P F + RLRK+LYGLKQ G+ WN L + +R DPC+Y +EG
Sbjct: 907 PRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQD---LPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQP---EGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEG 1094 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig132.2002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig132.2002.1 >prot_H-paniculata_contig132.2002.1 ID=prot_H-paniculata_contig132.2002.1|Name=mRNA_H-paniculata_contig132.2002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp MASSSVAKIGITVSTIFLLGLKPNVPLPTHACTSLATKRGETDILVAVHVback to top mRNA from alignment at H-paniculata_contig132:12940..14208+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig132.2002.1 ID=mRNA_H-paniculata_contig132.2002.1|Name=mRNA_H-paniculata_contig132.2002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1269bp|location=Sequence derived from alignment at H-paniculata_contig132:12940..14208+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig132:12940..14208+ >mRNA_H-paniculata_contig132.2002.1 ID=mRNA_H-paniculata_contig132.2002.1|Name=mRNA_H-paniculata_contig132.2002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig132:12940..14208+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |