mRNA_H-paniculata_contig13173.1987.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: D7FZ64_ECTSI (Long chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ64_ECTSI) HSP 1 Score: 437 bits (1124), Expect = 8.050e-147 Identity = 213/276 (77.17%), Postives = 246/276 (89.13%), Query Frame = 1
Query: 1 IIIQIACNSFDRSEGQPLDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
++ Q++ NSFDRSEG P++PWVGDVFVSILPCWHIFERTAEYF ++RGVTM YSNVRNFKSDLK+++PHFLIVVPRLLETIWKGVQTQL AKSKGAQKAAGALT +S++RM+A R F VIRDS P E+ALS +M + +PLKLAA+KLVW KIR+GVGGRVK+VVSGGSSLPSFLEDFFEMAG+RV+VGYGLTETSPVI+NRVA +N +GT GKP PG+EVKI DQETG +V +G TGKILIRGPQVM+GYQNNP ATAAVIDKDG+FDTG+
Sbjct: 269 LLHQVSQNSFDRSEGSPMNPWVGDVFVSILPCWHIFERTAEYFTLTRGVTMGYSNVRNFKSDLKKFKPHFLIVVPRLLETIWKGVQTQLEAKSKGAQKAAGALTRVSSLRMKAARRFSGTVIRDSKPKGPEKALSAVLMGVTLPLKLAAEKLVWGKIRDGVGGRVKVVVSGGSSLPSFLEDFFEMAGVRVLVGYGLTETSPVIANRVATENTKGTTGKPVPGSEVKIADQETGQQVAVGQTGKILIRGPQVMSGYQNNPEATAAVIDKDGYFDTGD 544
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: A0A7S2Y0I5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0I5_9STRA) HSP 1 Score: 317 bits (813), Expect = 5.980e-102 Identity = 155/276 (56.16%), Postives = 202/276 (73.19%), Query Frame = 1
Query: 1 IIIQIACNSFDRSEGQPLDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
++ Q+ NSF+R+ + DPWVGDVFVSILPCWHIFERTAEY+ +SRG +VYSN+RNFK+DL +Y+PHFLI VPRL ETI+KGVQ +++ +K TA + M+A RV VIR P E+A + + + PL + ADK+VWSK+REG+GGR+K++VSGGSSL LEDF+EM G RV+VGYGLTETSPVI+NRVA N+ G+VGKP P T++K+VD ET ++P+G G IL RGPQ+M Y +NP AT ID +GFF+TG+
Sbjct: 112 LLHQVHNNSFNRANNRKYDPWVGDVFVSILPCWHIFERTAEYYTLSRGAKLVYSNIRNFKTDLVKYKPHFLIAVPRLFETIYKGVQQNFSSQKGIKKKLVTFFTASCMLYMKAKRVVTNMVIRQKAPDILEKAWAALTLAVTWPLAMLADKMVWSKVREGLGGRMKVMVSGGSSLSPVLEDFYEMIGGRVIVGYGLTETSPVIANRVAEHNLVGSVGKPPPNTQIKVVDVETRKELPIGEKGLILARGPQIMREYMSNPEATREAIDDEGFFNTGD 387
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: A0A836C922_9STRA (Long-chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C922_9STRA) HSP 1 Score: 319 bits (817), Expect = 1.200e-100 Identity = 155/276 (56.16%), Postives = 196/276 (71.01%), Query Frame = 1
Query: 1 IIIQIACNSFDRSEGQPLDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
++ QI NSF+R+ G DPWVGD FVSILPCWHIFERTAEYFM++RGV MVYSN+RNFK+DL +YRPHFL+ VPRL ETI+KG QT A++ K QK TAIS ++M+ V V+ D P + ++ + L+ P ADKLVWSK+R G+GGR+K +VSGGSSL +LEDFF+M G RVVVGYGLTETSPVI NR+ N++G+VG P GT +K+V+ ET VP G G + +GPQ+M GY N AT V+D +GFFDTG+
Sbjct: 291 MVHQILENSFNRANGGKYDPWVGDTFVSILPCWHIFERTAEYFMLARGVEMVYSNIRNFKNDLVKYRPHFLVAVPRLYETIYKGAQTNFASQPKSKQKLVAIFTAISTLQMKLRSVVTGMVVGDKPPSPLRQLMAAVALALVSPFHKVADKLVWSKVRAGMGGRIKCLVSGGSSLAGYLEDFFDMIGHRVVVGYGLTETSPVILNRLVEHNLKGSVGLPPGGTTIKLVNPETREPVPAGEIGVVCAKGPQIMAGYNRNEEATRQVMDSEGFFDTGD 566
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: W7T8D8_9STRA (Amp-dependent synthetase and ligase (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8D8_9STRA) HSP 1 Score: 288 bits (737), Expect = 5.350e-91 Identity = 142/278 (51.08%), Postives = 202/278 (72.66%), Query Frame = 1
Query: 1 IIIQIACNSF-DRSEGQPL-DPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
++ Q+ NSF D +P +P +GDV VS+LPCWHIFERTAEY+M S+G+ +VYSNV+NFK+DL +++P F++ VPRLLETI++GV + AA+ +K T + + ++A RV R V+R P ER L++ + ++ PL DKLVWSK+R G+GGR+K++V+GGSS+P LEDFFE+ V+VGYG+TETSPVI+NRVA N+ G+VG+ A TEVKIVD E+G ++P G G +L+RGPQ+M GY++N A+ AV+D++GF DTG+
Sbjct: 76 LLHQVNYNSFTDSPSKEPAYNPVLGDVLVSVLPCWHIFERTAEYWMFSKGIHVVYSNVKNFKADLAKHQPQFIVAVPRLLETIYRGVLQKFAAEKGAKKKIIEFFTRVGSAWVKAWRVARGLVLRSRAPNPIERLLALVLALVLSPLAAVGDKLVWSKVRAGLGGRIKVLVAGGSSMPLVLEDFFELLRTPVIVGYGMTETSPVITNRVAEKNLAGSVGRTARDTEVKIVDPESGARLPEGQPGLVLMRGPQMMAGYKSNAEASKAVLDQEGFLDTGD 353
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: A0A4D9CQD3_9STRA (AMP-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQD3_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.220e-87 Identity = 142/278 (51.08%), Postives = 200/278 (71.94%), Query Frame = 1
Query: 1 IIIQIACNSF-DRSEGQPL-DPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
++ Q+ NSF D +P +P +GDV VS+LPCWHIFERTAEY+M S+G+ +VYSNV+NFK+DL ++RP F++ VPRLLETI++GV + AA+ +K T + ++A RV R V+R P ER L++ + ++ PL DKLVWSK+R G+GGR+K++V+GGSS+P LEDFFE+ V+VGYG+TETSPVI+NRVA N+ G+VG+ A T VKIVD E+G ++P G G +L+RGPQ+M GY++N A+ AV+D++GF DTG+
Sbjct: 320 LLHQVNYNSFTDSPSKEPAYNPVLGDVLVSVLPCWHIFERTAEYWMFSKGIHVVYSNVKNFKADLAKHRPQFIVAVPRLLETIYRGVLQKFAAEKGAKKKIIDFFTRTGSAWVKAWRVARGLVLRSRAPNPIERLLALVLALVLSPLAAVGDKLVWSKVRAGLGGRIKVLVAGGSSMPLVLEDFFELLRTPVIVGYGMTETSPVITNRVAEKNLAGSVGRTARDTVVKIVDPESGARLPEGQPGLVLMRGPQMMAGYKSNAEASKAVLDQEGFLDTGD 597
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: UPI001685F2A6 (long-chain fatty acid--CoA ligase n=1 Tax=unclassified Planktothrix TaxID=2648599 RepID=UPI001685F2A6) HSP 1 Score: 256 bits (653), Expect = 4.850e-77 Identity = 123/262 (46.95%), Postives = 179/262 (68.32%), Query Frame = 1
Query: 43 GQPLDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
G + P GD+ +SILP WH +ER AEYF++S+GVT +Y+N+R+ KSDLK+++PH+++ VPRL E+I++GVQ Q + Q+ L IS + A R+ R ++ P E+ L+ A + P++ AD+LV+ ++R+ GGR+K V+SGG SL + L++FFE+ G+ V+VGYGLTETSPV R N+RG+ G+P P TE KIVD ET +P+G G +L+RGPQVM GY +NP+ATA ID +G+FDTG+
Sbjct: 248 GSVIQPQPGDIVLSILPTWHAYERAAEYFIISQGVTQIYTNLRHVKSDLKQFKPHYMVGVPRLWESIYEGVQKQFREQPANKQRLINTLLGISQKYIEARRIVRGLKLQPFPPSPAEKLLAAAQTIALTPIQAIADRLVYQQVRQATGGRLKYVLSGGGSLATHLDNFFEIVGVEVLVGYGLTETSPVTHARRPWHNLRGSAGQPIPLTECKIVDPETRQTLPVGQRGLVLVRGPQVMGGYYHNPTATAKAIDPEGWFDTGD 509
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: UPI00202288DE (long-chain fatty acid--CoA ligase n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI00202288DE) HSP 1 Score: 252 bits (644), Expect = 1.220e-75 Identity = 121/262 (46.18%), Postives = 175/262 (66.79%), Query Frame = 1
Query: 43 GQPLDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
G + P GD +S+LP WH++ER AEYF++S+G T +Y+N+R K DLKE++PHF++ VPRL E+I++GVQ Q + Q+ +L +S ++A R+ + + + P G+R + + PL AD+LV+ K+RE GG +K V+SGG SL LE+FFE+ GI ++VGYGLTETSPV + R N+RG+ G+P PGTE++IVD ET +P+G G +L+RGPQ+M GY NP ATA ID +G+FDTG+
Sbjct: 240 GVVVQPQKGDRILSLLPTWHVYERAAEYFLLSQGCTQIYTNIRQVKRDLKEFKPHFMVGVPRLWESIYEGVQKQFREQPANKQRLVDSLLDLSQRYIKARRIMQGLSLDNLHPSVGQRLKAEVQTAALAPLHALADRLVYRKVREATGGNIKQVISGGGSLAMHLENFFEIVGIEILVGYGLTETSPVTNARRPWRNLRGSSGQPIPGTEIRIVDPETRQPLPIGQRGLVLVRGPQIMQGYYQNPEATAKAIDSEGWFDTGD 501
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: UPI001ABBD8DA (AMP-binding protein n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABBD8DA) HSP 1 Score: 251 bits (641), Expect = 2.220e-75 Identity = 120/265 (45.28%), Postives = 176/265 (66.42%), Query Frame = 1
Query: 34 RSEGQPLDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
+ G + P VGD+ +SILP WH++ERT EYF+ S+G T VY+N+R+ K DLKE++PH+++ VPRLLE+I++GVQ Q + Q+ L +IS ++A R+ + + + P G+R + + P + ++LV++K+RE GGR+K SGG +LP ++DFFE+ ++++ GYGLTETSPV R NVRG+ G+P PGTE KIVD ET +P G +L+RGPQ+M GY +NP ATA IDKDG+FD+G+
Sbjct: 229 NTVGVVVQPQVGDIVLSILPTWHVYERTCEYFLFSQGCTQVYTNLRSVKRDLKEFKPHYMMCVPRLLESIYEGVQKQFREQPASKQRLINNLVSISEKYIKARRIVQGLSLDNLNPSVGDRLAASIQTVALFPFHMLGERLVYNKVREATGGRIKQFFSGGGALPKHIDDFFEIINVQILQGYGLTETSPVTHGRRQWQNVRGSSGQPIPGTETKIVDPETRKPLPPRERGLVLLRGPQIMQGYYHNPEATAKAIDKDGWFDSGD 493
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: A0A8J7F3H1_9CYAN (Long-chain fatty acid--CoA ligase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7F3H1_9CYAN) HSP 1 Score: 250 bits (639), Expect = 4.200e-75 Identity = 119/259 (45.95%), Postives = 178/259 (68.73%), Query Frame = 1
Query: 52 LDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
+ P +GDV +SILP WH+FERT EYF++S+G T VY+N+R+ K+DLK+++PH++I VPR+ E+I++GVQ Q + Q IS ++A R+ ++ + + PG GER + T++ PL+ A+K+V+SK+RE GGRVK ++SGG +L ++DF+E+ G+ +VVGYGLTETSPV R N+RG+ G P PGT+ KIVD ET ++P G G +L++GPQ+M GY NP AT ID +G+F++G+
Sbjct: 236 VQPELGDVVLSILPTWHVFERTGEYFLLSQGCTQVYTNLRSIKNDLKQFKPHYMIGVPRIWESIYEGVQKQFREQPASKQALINRFLGISNKYIKARRIAQQLDLENLNPGMGERITANIQATVLSPLQALAEKIVYSKVREATGGRVKQLISGGGALAKHIDDFYEIVGVSIVVGYGLTETSPVTHARRHWSNLRGSAGLPIPGTQAKIVDLETRKELPTGEKGLVLLKGPQIMQGYYKNPEATQTAIDAEGWFNSGD 494
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Match: A0A654SBG5_9CYAN (AMP-dependent synthetase and ligase n=1 Tax=Chrysosporum ovalisporum TaxID=75695 RepID=A0A654SBG5_9CYAN) HSP 1 Score: 248 bits (633), Expect = 3.020e-74 Identity = 119/265 (44.91%), Postives = 179/265 (67.55%), Query Frame = 1
Query: 34 RSEGQPLDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTMVYSNVRNFKSDLKEYRPHFLIVVPRLLETIWKGVQTQLAAKSKGAQKAAGALTAISAVRMRAGRVFRKDVIRDSVPGKGERALSVAMMTLMVPLKLAADKLVWSKIREGVGGRVKIVVSGGSSLPSFLEDFFEMAGIRVVVGYGLTETSPVISNRVAADNVRGTVGKPAPGTEVKIVDQETGTKVPLGTTGKILIRGPQVMTGYQNNPSATAAVIDKDGFFDTGE 828
R+ G + P GD+ +SILP WH +ER+ EYF++S+G T +Y+N+R+ K DLK+++PH++I VPRL E+I++GVQ Q + Q+ L A+S + + R+ + + E+ +S M ++PL ++LV+ K+RE GGR+K V+SGG +LP ++DFFE+ + ++ GYGLTETSPV + R N+RG+ G+P PGTEVKIVD ET T +PLG G +L++GPQVM+GY NP ATA VID +G+F++G+
Sbjct: 229 RTLGTVVQPQPGDIILSILPSWHSYERSGEYFLLSQGCTQIYTNLRSVKQDLKKFKPHYMIAVPRLWESIYEGVQKQFREQPANKQRLIKFLLAVSEIHIAKQRIAQGLSLNHLHASTLEKFISGMMALALLPLHTLGERLVYGKVREATGGRIKQVISGGGALPRHIDDFFEIIAVEILQGYGLTETSPVTNARRPWHNLRGSSGQPIPGTEVKIVDPETKTPLPLGKGGLVLLKGPQVMSGYYQNPEATAKVIDAEGWFNSGD 493 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13173.1987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13173.1987.1 >prot_H-paniculata_contig13173.1987.1 ID=prot_H-paniculata_contig13173.1987.1|Name=mRNA_H-paniculata_contig13173.1987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp IIIQIACNSFDRSEGQPLDPWVGDVFVSILPCWHIFERTAEYFMVSRGVTback to top mRNA from alignment at H-paniculata_contig13173:2726..6534- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13173.1987.1 ID=mRNA_H-paniculata_contig13173.1987.1|Name=mRNA_H-paniculata_contig13173.1987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3809bp|location=Sequence derived from alignment at H-paniculata_contig13173:2726..6534- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13173:2726..6534- >mRNA_H-paniculata_contig13173.1987.1 ID=mRNA_H-paniculata_contig13173.1987.1|Name=mRNA_H-paniculata_contig13173.1987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig13173:2726..6534- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |