mRNA_H-paniculata_contig1307.1921.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: D8LRI3_ECTSI (200 kDa antigen p200 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI3_ECTSI) HSP 1 Score: 416 bits (1068), Expect = 4.620e-122 Identity = 363/890 (40.79%), Postives = 463/890 (52.02%), Query Frame = 1
Query: 1 MDAGRRKRRAIPAGGRRRPRLGDSLKNEENRPE-----------VPTPTAQGPVLTP----TTVANAAAVTGRKEGALHTEVASVAERTHDISPG-----PGHSRSLPLESTVHSSPYNGLAVDKDVPATSMMPAGGVANSLPAVTLGRPTGTVEKKSSPNVTGGXXXXXXXSATG----GEKTQADPSPY------TSRPRKYTTGEAGTVDASVLSSLERQLILLTNEREATAARFLREEQRLELEATASKVAGXXXXXXXXXXXXXXXXXXXXXXQLEAEAVGHKATVAALESKSASDLGAEQASSIRKMGDAETRHHADLRTALERHEEALSELKRLHREELEDVRRRSADSQTLETLAGQVQASAGALKLLQADMVERRGAAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMDQVMRGLRGQNAGERERLRHEHLRLDALQASMVAEVEAMRKGIDMEQKRLAERSVALDRQKKEADLAARADIDRLAEERLKLKMERKTFADCLVSASQAAEETAKRHAEEEQRLNLARQSLEKEAMHLEARLTTARADLRKAEDVRVALDGAREQDELERRRLKRMAAELERAFEDVRIRGSQIEERWLETENARVQAIESSREVXXXXXXXXXXXXXXXXAARRQDEERTLIAQARAQSATELSTSRRLKSELARAVTAHEKQRWRSNQPTLLSSDVHANAMSTAEVSMPCNRISHPPASHQGWRASAEFGNAIVVKPNENAKECNTHQPSRHPGPPGTVAIPNTGLAAAEATLQAAASAPPFAGLDVGKELTRLAQRATDIRQCTREQRAFLSNARVTTALCPTSLASPATPEYLSFTGDHRTMHTSMHGRSGGDGSAAAPLFLSSRVDSVIRGSGSS 2580
M+ R+ RR +PAG RRR R G+S + E P+ P+ T TT GR + A + VA ER D PG S +LP + G P T+ G S P+ P+ + S G G K + S R + E+ VD SVL+SLERQL+LL +E+EA A + R+EQRL+ +A ++ A XXXXXXXX S+SA DL AEQ S ++K+ DAE R DL RRR++DS+TLETLA QVQASAGA+KLL+++M+ER+ +EVSREG MDARERLI+ELE SA+RAQQTAEDEVQRLQGTLMAMDQVM LRGQNAGERERLR EHLR++ALQ +MVAEVE++RK ++ E++RLA R+KL+ +R++FA +SAS+AAEE A++HA+EE RLNLARQSLEKEA EARL+ ARADL KA+ VR LD R+QDE+ERRRLK +A ELERAFE+VR + + ER E E ++ A+ +S+ AARR + ER+ IAQARAQSATELSTSRRLK+EL+RA ++Q+ + + MS E + S +G VV T + +P G + +P TG+AAAEATLQA +SAPPF GLD+G+EL RLA+RA DIR+CTREQ FL ++R P L P+ D M G G A FLSS RGSGSS
Sbjct: 823 MEGSRKPRRTLPAGRRRRSRRGESSTVADGEMEHAGVSIANTSLASMPSTASPLATAMLAETTFERTTLSVGRADDA-GSGVAGTGERAGDNGSSRSTLAPGVSPTLPAAVREPTKSSTGATAFGITPVTAAATKGTGTESTPSSAERVPSAALPGSESDRALDTRALIDSRGTLGPLDHGSKNGSSNRDLLSGVAAASSSRSENSAESRGVDVSVLASLERQLVLLASEKEAVATKVARDEQRLQRDADLARDATAAAQARAFESEAALXXXXXXXXXXXXXXXXXXXXXXXXXSRSARDLRAEQESCLKKISDAEARRQEDLCKXXXXXXXXXXXXXXXXXXXXXXTRRRNSDSKTLETLAEQVQASAGAVKLLRSEMIERKNVSEVSREGHMDARERLIKELEQSARRAQQTAEDEVQRLQGTLMAMDQVMSALRGQNAGERERLRQEHLRMEALQGAMVAEVESVRKSVEEERQRLA---------------------------RVKLETDRESFAALQISASKAAEEMARQHADEEGRLNLARQSLEKEASSFEARLSCARADLHKADHVRETLDRLRDQDEVERRRLKAVARELERAFEEVRAKTDESIERQREAEAMKMGALAASKTAAEEREAAQLRYIRTEEAARRLEAERSSIAQARAQSATELSTSRRLKAELSRAFAIQQRQQAKGKSAAAADIALSHRNMSPGEQA----------GSGRGXXXXXXXXXXSVVAKMPGLPTEATLGLAGNPTSTGGIGLPFTGIAAAEATLQAISSAPPFPGLDMGRELGRLARRAADIRECTREQSVFLMSSRAA-RFSPAPLTVSDNPQESKIASD-------MGGLEGPGRFPGAQAFLSS----TRRGSGSS 1662
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: A0A6H5KKS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS5_9PHAE) HSP 1 Score: 349 bits (895), Expect = 1.030e-98 Identity = 337/864 (39.00%), Postives = 431/864 (49.88%), Query Frame = 1
Query: 1 MDAGRRKRRAIPAGGRRRPRLGDSL-----KNEE------NRPEVPTPTAQGPVLTP----TTVANAAAVTGRKEGALHTEVASVAERTHDISPG-----PGHSRSLPLESTVHSSPYNGLAVDKDVPATSMMPAGGVANSLPAVTLGRPTGTVEKKSSPNVTGGXXXXXXXSATG----------GEKTQADPSPYTSRPRKYTTGEAGTVDASVLSSLERQLILLTNEREATAARFLREEQRLELEATASKVAGXXXXXXXXXXXXXXXXXXXXXXQLEAEAVGHKATVAALESKSASDLGAEQASSIRKMGDAETRHHA-----------DLRTALERHEEALSELKRLHREELEDVRRRSADSQTLETLAGQV-----------------QASAGALKLLQADMVERRGAAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMDQVMRGLRGQNAGERERLRHEHLRLDALQASMVAEVEAMRKGIDMEQKRLAERSVALDRQKKEADLAARADIDRLAEERLKLKMERKTFADCLVSASQAAEETAKRHAEEEQRLNLARQSLEKEAMHLEARLTTARADLRKAEDVRVALDGAREQDEL--------ERRRLKRMAAELERAFEDVRIRGSQIEERWLETENARVQAIESSREVXXXXXXXXXXXXXXXXAARRQDEERTLIAQARAQSATELSTSRRLKSELARAVTAHEKQRWRSNQPTLLSSDVHANAMSTAEVSMPCNRISHPPASHQGWRASAEFGNAIVVKPNENAKECNTHQPSRHPGPPGTVAIPNTGLAAAEATLQAAASAPPFAGLDVGKELTRLAQRATDIRQCTREQRAFLSNAR 2394
M+ R+ RR +PAG RRR R G+S +NE N P+ P+ T TT GR + A + VA + ER D PG S +LP++ + G P T+ G S P+ P+ + S A G K + S R + E+ VD SVL+SLERQL LL +E+EA AA+ R+EQR + +A ++ A XXXXXXXX S+SASDL AEQ S ++K+ DAE RH A DLR A R EEALSELKRLHREELED RRR++ S+TLETLA QV QASAGA+KLLQ++M+ER+ +EVSREG MDARERLI+ELE SA+RAQQTAEDEVQRLQGTLMAMDQ +MVAEV+++RK ++ E++RLAER AL+R K+EAD ARA+ DRLAE QAAEE A+RHA+EE RLNLARQSLEKEA EARL+ ARADL KA+ VR LD R+QDE+ ERRRLK +A ELERAFE+VR + + ER E E +++A+ +S+ EER A +L R+V ++ H N S A++S + S + ++VVK E T + +P G + +P TG+AAAEATLQA SAPPF GLD+G+EL RLA+RA DIR+CTREQ +FL ++R
Sbjct: 823 MEGSRKPRRTLPAGRRRRSRRGESSTAADGENEHAGVSVANSSLASMPSIAIPMATARPAETTFERTTLSVGRADDA-GSGVAGIGERAGDNGSSRSTLAPGVSPTLPVDVREPTKSSTGATAFGKTPVTAAATKGTGMESTPSSAERVPSAALPGSESDRALDTRALTDSRGALGPFDHGSKNGSSNKDRLSGVAAASSSRSENSAESRGVDVSVLASLERQLALLASEKEAVAAKVARDEQRFQRDADLARDATAAAQTRAFESEAALXXXXXXXXXXXXXXXXXXXXXXXXXSRSASDLRAEQESCLKKISDAEARHQASAGSAGAAAAEDLRKAERRQEEALSELKRLHREELEDTRRRNSASKTLETLAEQVSFTPLLSCNVSGVCDKVQASAGAVKLLQSEMIERKNVSEVSREGHMDARERLIKELEQSARRAQQTAEDEVQRLQGTLMAMDQ---------------------------GAMVAEVDSVRKSVEEERQRLAERGAALERDKREADATARAESDRLAE--------------------QAAEEMARRHADEEGRLNLARQSLEKEASSFEARLSCARADLHKADHVRKTLDRLRDQDEVGGWVGRWVERRRLKAVAGELERAFEEVRAKTDESIERQREAEAMKMEALAASKTAA---------------------EERE---------AAQL-----------RSVRTEXXXXXXXXXXXXIAQASH-NLQSCADMS-----LGEQAGSGRXXXXXXXXXXSVVVKVPGLPTEA-TLGLAGNPTSTGGIGLPFTGIAAAEATLQAICSAPPFPGLDMGRELGRLARRAADIRECTREQSSFLLSSR 1590
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: A0A835YM98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM98_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.310e-17 Identity = 55/99 (55.56%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 907 EALSELKRLHREELEDVRRRSADSQTLETLAGQVQASAGALKLLQADMVERRGAAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMD 1203
EA++ LKR+H +E++ V+RR+ D++ LE LA Q+Q+SAGAL LQ ++E+R A+V+R GQ++ARERL+ ELEGSA+R+Q AE EV RL G L AMD
Sbjct: 691 EAIAALKRVHADEMDAVKRRAGDARALEGLAQQIQSSAGALTQLQGQVLEQRRGADVARTGQLEARERLVGELEGSARRSQLAAEQEVTRLHGVLAAMD 789
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: A0A067BDW4_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BDW4_SAPPC) HSP 1 Score: 76.6 bits (187), Expect = 1.420e-10 Identity = 64/205 (31.22%), Postives = 105/205 (51.22%), Query Frame = 1
Query: 931 LHREELEDVRRRSADSQTLETLAGQVQASAGALKLLQADMVERRGAAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMDQVMRGLRGQNAGERERLRHEHLRLDALQASMVAEVEAMRKGIDMEQKRLAERSVALDRQKKEADLAARADIDRLAEERLKLKMERKTFADCLVSASQAAEETAKRHAEEEQRLN 1545
L ++ D R A+ + +E L QV+A+ LK+LQ +V + A+V G+ ++R RL+ E+EGS K ++E QRLQ L A++ MR LRG++ E+ERLR E RL+ L ++ +++ D K +++ + + + A+ ++L EE L M R FA A + +RH E QR+N
Sbjct: 565 LQQQRWRDEESRHAEKEAVERLLTQVRAAVSNLKVLQEHVVFGKSEADVRSMGENESRSRLLLEMEGSCKAYMSRTQEECQRLQSLLSALETTMRSLRGEHMEEKERLRSEQARLEELALHFKSQTTLLQERTDTNTKVVSQTLASYIQDIRIAEARMHKRREQLQEEERSLHMARAAFAAQQEEALRDQRIVQERHQAEAQRVN 769
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: A0A067BXX0_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BXX0_SAPPC) HSP 1 Score: 76.6 bits (187), Expect = 1.790e-10 Identity = 64/205 (31.22%), Postives = 105/205 (51.22%), Query Frame = 1
Query: 931 LHREELEDVRRRSADSQTLETLAGQVQASAGALKLLQADMVERRGAAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMDQVMRGLRGQNAGERERLRHEHLRLDALQASMVAEVEAMRKGIDMEQKRLAERSVALDRQKKEADLAARADIDRLAEERLKLKMERKTFADCLVSASQAAEETAKRHAEEEQRLN 1545
L ++ D R A+ + +E L QV+A+ LK+LQ +V + A+V G+ ++R RL+ E+EGS K ++E QRLQ L A++ MR LRG++ E+ERLR E RL+ L ++ +++ D K +++ + + + A+ ++L EE L M R FA A + +RH E QR+N
Sbjct: 785 LQQQRWRDEESRHAEKEAVERLLTQVRAAVSNLKVLQEHVVFGKSEADVRSMGENESRSRLLLEMEGSCKAYMSRTQEECQRLQSLLSALETTMRSLRGEHMEEKERLRSEQARLEELALHFKSQTTLLQERTDTNTKVVSQTLASYIQDIRIAEARMHKRREQLQEEERSLHMARAAFAAQQEEALRDQRIVQERHQAEAQRVN 989
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: T0PQ39_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PQ39_SAPDV) HSP 1 Score: 75.5 bits (184), Expect = 4.080e-10 Identity = 64/205 (31.22%), Postives = 104/205 (50.73%), Query Frame = 1
Query: 931 LHREELEDVRRRSADSQTLETLAGQVQASAGALKLLQADMVERRGAAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMDQVMRGLRGQNAGERERLRHEHLRLDALQASMVAEVEAMRKGIDMEQKRLAERSVALDRQKKEADLAARADIDRLAEERLKLKMERKTFADCLVSASQAAEETAKRHAEEEQRLN 1545
L ++ D R A+ + +E L QV+A+ LK+LQ ++V + A+V G+ ++R RL+ E+EGS K ++E QRLQ L A++ MR LRG++ E+ERLR E RL+ L ++ +++ D K +++ + + + A+ ++ EE L M R FA A + RH E QRLN
Sbjct: 808 LQQQRWRDEENRHAEKEAVERLLTQVRAAVSNLKVLQENVVFGKSEADVRSMGENESRSRLLLEMEGSCKAYMSRTQEECQRLQSLLSALETTMRSLRGEHMEEKERLRSEQARLEELALHFKSQTTLLQERTDTNTKVVSQTLASYIQDIRIAEARMHKRREQHQEEERSLHMARAAFAAQQEEALRDQRIVQDRHQAEAQRLN 1012
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: A0A662X029_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X029_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.270e-5 Identity = 70/205 (34.15%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 964 RSADSQTLETLAGQVQASAGALKLLQ----ADMVERRGAAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMDQVMRGLRGQNAGERERLRHEHLRLDALQASMVAEVEAMRKGIDMEQKRLAERSVALDRQKKEADLAARADIDRLAEERLKLKMERKTFADCLVSASQAAEETAKRHAEEEQRLNLARQSLE 1566
R + + LE L Q+Q + L L Q AD AA V+ E +AR R+I LEGS+KRA Q AE E +L L ++ R R ++ERLR E RLDAL A + A+ A+R D E A + + +Q EA AR RLA RL+L+ + + + + E+TA E+++L +R +LE
Sbjct: 859 RHREKRALEALTAQLQRALARLTLSQQVQEADGGAEHSAARVAAED--EARLRVIASLEGSSKRAAQQAEQERVKLTELLRELESGARSARQGALEDKERLRQEQQRLDALSAHLQAQSTALR---DQE----AAHAAHMGQQLAEARQDARVGEARLATRRLQLERDERALYEARADFAAFREQTALEIEREQEQLRTSRLTLE 1054
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: A0A6A3KDR9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KDR9_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 6.540e-5 Identity = 96/301 (31.89%), Postives = 135/301 (44.85%), Query Frame = 1
Query: 814 LGAEQASSIRKMGDAETRHHADLRTALERH-EEALSELKR--------LHREELE----DVRRRSADSQTLETLAGQVQASAGALKLLQADMVERRG----AAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMDQVMRGLRGQNAGERERLRHEHLRLDALQASMVAEVEAMRKGIDMEQKRLAERSVALDRQKKEADLAARADIDRLAEERLKLKMERKTFADCLVSASQAAEETAKRHAEEEQRLNLARQSLEKEAMHLEARLTTARADLRKAEDVRVALDGAREQ 1665
L A QA++ K A +H A+L A R E LS KR L RE + D R + + LE L+ Q+Q + L + E G AA V+ E +AR R+I LEGS+KRA Q AE E +L L ++ R R ++ERLR E RLDAL A + A+ A+R D E A + + +Q EA AR RLA R +L+ + + + + E+TA E + L +R LE L A A+L ED AL+ R++
Sbjct: 800 LEAHQAAAASKENAASFQHRAELLEAEVRSLREELSRSKRAVQDAELALAREIAQHDEVDQLERHREKRALEALSAQMQRALARLTISHQVQEEGSGYDNSAARVAAED--EARLRVIASLEGSSKRAAQHAEQERTKLAELLRELEAGARNARQGALEDKERLRQEQQRLDALSAHLQAQAAALR---DQE----AAHAGYMGKQLAEAREDARVYEARLATRRTQLERDERALYEARAEFAAFREQTALEIEREHEELRRSRLKLEDAWRELRADREDLEAELASHEDEFQALESVRQE 1091
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Match: A0A662WVJ1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVJ1_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 6.540e-5 Identity = 70/205 (34.15%), Postives = 100/205 (48.78%), Query Frame = 1
Query: 964 RSADSQTLETLAGQVQASAGALKLLQ----ADMVERRGAAEVSREGQMDARERLIQELEGSAKRAQQTAEDEVQRLQGTLMAMDQVMRGLRGQNAGERERLRHEHLRLDALQASMVAEVEAMRKGIDMEQKRLAERSVALDRQKKEADLAARADIDRLAEERLKLKMERKTFADCLVSASQAAEETAKRHAEEEQRLNLARQSLE 1566
R + + LE L Q+Q + L L Q AD AA V+ E +AR R+I LEGS+KRA Q AE E +L L ++ R R ++ERLR E RLDAL A + A+ A+R D E A + + +Q EA AR RLA RL+L+ + + + + E+TA E ++L +R +LE
Sbjct: 862 RHREKRALEALTAQLQRALARLTLSQQVQEADGGVEHSAARVAAED--EARLRVIASLEGSSKRAAQQAEQERVKLTELLRELETGARTARQGALEDKERLRQEQQRLDALSAHLQAQSTALR---DQE----AAHAAHMGQQLAEARQDARVGEARLATRRLQLERDERALYEARADFAAFREQTALEIEREREQLQTSRLALE 1057 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1307.1921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1307.1921.1 >prot_H-paniculata_contig1307.1921.1 ID=prot_H-paniculata_contig1307.1921.1|Name=mRNA_H-paniculata_contig1307.1921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=880bp MDAGRRKRRAIPAGGRRRPRLGDSLKNEENRPEVPTPTAQGPVLTPTTVAback to top mRNA from alignment at H-paniculata_contig1307:2664..11330- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1307.1921.1 ID=mRNA_H-paniculata_contig1307.1921.1|Name=mRNA_H-paniculata_contig1307.1921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8667bp|location=Sequence derived from alignment at H-paniculata_contig1307:2664..11330- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1307:2664..11330- >mRNA_H-paniculata_contig1307.1921.1 ID=mRNA_H-paniculata_contig1307.1921.1|Name=mRNA_H-paniculata_contig1307.1921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5280bp|location=Sequence derived from alignment at H-paniculata_contig1307:2664..11330- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |