mRNA_H-paniculata_contig13042.1907.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 154 bits (388), Expect = 3.050e-42 Identity = 73/180 (40.56%), Postives = 115/180 (63.89%), Query Frame = 1 Query: 1 LAAEFGVRERYPRKVWANLKEQLDRGHTISLRSARRSGRSSDFTPTKQVRIREINANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVARDRRKFKTGFNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 + +GV ++YP ++W +K Q+D + L + RSGR S TP+K ++ +N+ NR+ T++Q+S +L +LGLE G + W +GAA+ RI PSLS K++R+DFI D+V ++ N +H+DE+WFYL+ +KEKVR+F GE+ G +V H+SH+ K+M I A +RP Sbjct: 24 ICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARP 203
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: W2YNB0_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2YNB0_PHYPR) HSP 1 Score: 75.1 bits (183), Expect = 7.940e-13 Identity = 57/177 (32.20%), Postives = 92/177 (51.98%), Query Frame = 1 Query: 40 KVWANLKEQLDRGHTISLRSAR--RSGRSSDFTPTKQVRIRE----INANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVAR---DRRKFKTGFNTIHVDEAWFYLIHDKEKVRMFPGE-EKVGSIKVQHKSHILKVMFICAVSRP 540 ++W + + G I S R RSGR S T +V++ E I +R ++ L+S L + S LH++ +A + P L+ + RV+F V R +R F + + +H+DE WF+L DK+ R + GE E+V I V++K++I+KVMF+CAV+RP Sbjct: 57 RLWRRSVKAIQAGAPIDYESGRKGRSGRKSRLTSEFRVQLNEAIELIPLEDRA-DIRTLASSLG-----IAKSTLHDYYQAGAFRSHSAHVKPLLTDKQRAARVEFAAGFVHRGFGERLTFNSMMDFVHLDEKWFFLKKDKQ--RFYLGENEEVPHITVKNKNYIIKVMFLCAVTRP 225
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: A0A397ATC7_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ATC7_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.710e-12 Identity = 60/186 (32.26%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 1 LAAEFGVRERYPRKVWANLKEQLDRG----HTISLRSARRSGRSSDFTPTKQVRIREINANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVAR-DRRKFKTG-FNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 +A FG R++W L H++ R +SGR +T Q RI+ I + R S LG+ +S LH + K A+ + P L+ +K R+++ LDQV D KF ++T+HVDE WF++ + KV PGE K+ + K H+LKVMF+ AV+RP Sbjct: 40 VAEMFGCTPTTVRRIWKRASVDLSGNKTICHSVGQRKKGKSGRKQLYTDLPQ-RIQTIPQSRRYC----FRSVAHALGMP--TSTLHTYYKRGVIAKYSSVVKPLLTDSNKVCRLNWALDQVRDIDGEKFIDAMYDTVHVDEKWFFMTRLQRKVIGAPGE-KIKQRTCKSKQHLLKVMFLSAVARP 217
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: A0A3L6VAL4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VAL4_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 3.070e-12 Identity = 60/186 (32.26%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 1 LAAEFGVRERYPRKVWANLKEQLDRG----HTISLRSARRSGRSSDFTPTKQVRIREINANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVAR-DRRKFKTG-FNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 +A FG R++W L H++ R +SGR +T Q RI+ I + R S LG+ +S LH + K A+ + P L+ +K R+++ LDQV D KF ++T+HVDE WF++ + KV PGE K+ + K H+LKVMF+ AV+RP Sbjct: 40 VAEMFGCTPTTVRRIWKRASVDLSGNKTIFHSVGQRKKGKSGRKQLYTDLPQ-RIQTIPQSRRYC----FRSVAHALGMP--TSTLHTYYKRGVIAKYSSVVKPLLTDSNKVCRLNWALDQVRDIDGEKFIDAMYDTVHVDEKWFFMTRLQRKVIGAPGE-KIKQRTCKSKQHLLKVMFLSAVARP 217
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: A0A1R3I5M9_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I5M9_9ROSI) HSP 1 Score: 72.0 bits (175), Expect = 1.630e-11 Identity = 53/180 (29.44%), Postives = 89/180 (49.44%), Query Frame = 1 Query: 1 LAAEFGVRERYPRKVWANLKEQLDRGHTISLRSARRSGRSSDFTPTKQVRIREINANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVARDRRKFKTGFNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 LA+ FGV + +++W KE G+ +++ + GR K++++ L+ + +A+ L++ S LH LK R + P+L+F +K R+ F L + + FK ++TIH+DE WFYLI + P EE+ + K+ I KVMF+ AV+RP Sbjct: 54 LASSFGVCTKSIQRLWKRAKET---GNVYHMKT-KNCGR-------KRIQLDSDQFCEIPLSRRSTLRSMAD-ALKISKSTLHRLLKIGAILRHSSPLRPNLTFENKIARLRFCLKMLESNDSTFKGMYDTIHIDEKWFYLIRKSVNYYLLPDEEEPHRT-CKSKNFIPKVMFLAAVARP 220
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: UPI0006A6D7E0 (uncharacterized protein LOC106302859 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6D7E0) HSP 1 Score: 70.1 bits (170), Expect = 1.690e-11 Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 217 LGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVARD----RRKFKTGFNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 +GL + +S LH +K R I P LS + + R+ F L + +D KF +N++H+DE WFY+ EK + P EE+V Q K+HI KVMF+ A++RP Sbjct: 1 MGLGIATSTLHKRVKEGILRRHFNAIKPGLSDENMRARLKFCLSMLEKDSLAHEPKFVDMYNSVHIDEKWFYMTKKTEKYYVVP-EEEVPHRTCQSKNHITKVMFLAAMARP 111
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 72.0 bits (175), Expect = 1.730e-11 Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 1 Query: 4 AAEFGVRERYPRKVWANLKEQLD-----RGHTISLRSARRSGRSSDFTPTKQVRIREINANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVARDRRKFKTGFNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 AA FGV R +VW E +D G + R + GR S F ++ +++++ +R+ L + A G + + L N++K R + P L+ +KK RV+F L + D KF+ ++TIH+DE WFYL +K + GE + S + K I KVMF+CAV+RP Sbjct: 108 AALFGVTARTCSRVWKMYLETVDPETCPAGDVSTNR--KNCGRKSTFAAVEEA-VKKVSYKDRS----DLRTLSAASG--IARTTLGNYVKKGQILRHSGAVKPFLTEKNKKARVEFALSLIKPDG-KFEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARP 280
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: A0A1R3G118_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3G118_9ROSI) HSP 1 Score: 68.6 bits (166), Expect = 2.350e-10 Identity = 53/180 (29.44%), Postives = 88/180 (48.89%), Query Frame = 1 Query: 1 LAAEFGVRERYPRKVWANLKEQLDRGHTISLRSARRSGRSSDFTPTKQVRIREINANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVARDRRKFKTGFNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 LA+ FGV + + +W KE G+ +++ + GR + Q REI + R+ T++ ++ L++ S LH LK R + P+L+ K R+ F L ++ + FK ++TIH+DE WFYL + P EE+ + K+ I KVMF+ A++RP Sbjct: 146 LASSFGVCTKSIQCLWKRAKET---GNVYHMKT-KNCGRKRIQLDSDQ--FREIPLSRRS-TLRSMAD-----ALKISKSTLHRLLKIGAILRHSSPLRPNLTLEKKITRLRFCLKKLESNDSTFKDMYDTIHIDEKWFYLTKKSVNYYLLPDEEEPHR-NCKSKNFIPKVMFLAALARP 312
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: UPI00053F8527 (uncharacterized protein LOC104897330 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F8527) HSP 1 Score: 68.6 bits (166), Expect = 2.770e-10 Identity = 57/187 (30.48%), Postives = 88/187 (47.06%), Query Frame = 1 Query: 1 LAAEFGVRERYPRKVWANLKEQLDRGHTISLRS--ARRSGRSSDFTPTKQVRIREINANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRIT-PSLSFHHKKNRVDFILDQVARDRR----KFKTGFNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 +A + G+ ++W + K+Q + GH I +R+ A R GR K ++ + N RT S + L++ S +++ LK G R T P L+ HK R+ ++L + R KF N +H+DE WFYL D + + P E+ S Q K +KVMF+CA SRP Sbjct: 116 IAKKHGISRMTLDRIWKDAKKQREAGHAIDVRNKKAGRCGRKLKVYDDKW--LQSVPLNLRT------SIRAFAGYLKIPPSTVYSLLKR-GKLRSHTSSTHPKLTEDHKIQRMKWVLQHILPATRTQPPKFVDMQNVVHIDEKWFYLSPDMRRFYLLPAEDDPYSC-CQSKRFKIKVMFMCATSRP 292
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Match: A0A1R3HLY9_COCAP (Urease domain-containing protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3HLY9_COCAP) HSP 1 Score: 68.6 bits (166), Expect = 2.790e-10 Identity = 54/180 (30.00%), Postives = 89/180 (49.44%), Query Frame = 1 Query: 1 LAAEFGVRERYPRKVWANLKEQLDRGHTISLRSARRSGRSSDFTPTKQVRIREINANNRTLTVQQLSSKLAELGLEVGSSKLHNWLKAMGAARVQRRITPSLSFHHKKNRVDFILDQVARDRRKFKTGFNTIHVDEAWFYLIHDKEKVRMFPGEEKVGSIKVQHKSHILKVMFICAVSRP 540 LAA FGV + +++W KE G+ +++ + GR + Q R+I + R+ T++ ++ L++ S LH LK R + P+L+ +K R+ F L + D FK ++TIH+DE WFYL + EE+ + + K+ I KVMF+ AV+RP Sbjct: 196 LAASFGVCTKTIQRLWKRAKET---GNVFHMKT-KNCGRKRIQLDSDQ--FRQIPLSRRS-TLRSMAD-----ALKISKSTLHRLLKIGAILRHSSSLRPNLTPENKVVRLRFCLKMLESDDSTFKGMYDTIHIDEKWFYLTRKSVNYYLLLDEEEPHRM-CKSKNFIPKVMFLTAVARP 362 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13042.1907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13042.1907.1 >prot_H-paniculata_contig13042.1907.1 ID=prot_H-paniculata_contig13042.1907.1|Name=mRNA_H-paniculata_contig13042.1907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp LAAEFGVRERYPRKVWANLKEQLDRGHTISLRSARRSGRSSDFTPTKQVRback to top mRNA from alignment at H-paniculata_contig13042:2878..3417+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13042.1907.1 ID=mRNA_H-paniculata_contig13042.1907.1|Name=mRNA_H-paniculata_contig13042.1907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=540bp|location=Sequence derived from alignment at H-paniculata_contig13042:2878..3417+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13042:2878..3417+ >mRNA_H-paniculata_contig13042.1907.1 ID=mRNA_H-paniculata_contig13042.1907.1|Name=mRNA_H-paniculata_contig13042.1907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig13042:2878..3417+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |