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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 575 |
| Cds size | 318 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1303.1899.1 >prot_H-paniculata_contig1303.1899.1 ID=prot_H-paniculata_contig1303.1899.1|Name=mRNA_H-paniculata_contig1303.1899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
NTRSVDYLPQKNTGGRSFLKKLRTIGPSSSSHYLSWSSASARPSSCTIGK
TITTIDQSYHPSTGGNNCRGTASSGVPISGVPANNKPAKRYLWRNSWLRS
RGQTG* back to topmRNA from alignment at H-paniculata_contig1303:3863..11513+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1303.1899.1 ID=mRNA_H-paniculata_contig1303.1899.1|Name=mRNA_H-paniculata_contig1303.1899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7651bp|location=Sequence derived from alignment at H-paniculata_contig1303:3863..11513+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATACTAGGAGCGTAGATTACTTACCGCAGAAAAATACAGGAGGCCGGAG
CTTCCTGAAAAAATTACGAACAATCGGACCATCTTCTAGTAGCCACTACC
TATCTTGGAGTTCTGCGTCTGCAAGGTGCGTGGAAGGTACTGCTTTACAA
CACCCTACAAACGACAAACGGAACCACATATGGGTTACACGATCTTTTCA
TCCCAAATTCATGTTCAAAACGTGACAAAATTTCACTCCTATTAAGGATC
ACACTCCAGTCAGGTGCTTCTCCCATACTGTCTAACGATGCCCTGCAAAC
ACCAACTATTTTGTCCATTGAGAATTTCGCGTTAAAATCAGATATTCGTT
GAAGGTTCACAGTAAACACAGCGCCACCTGTTTCTCTAAGATCGATTTTC
CACACAGTAACGACCTACGATCCGCCTTGCCCCTGATAGCCCTCGAGTTC
TACCCCGTCTCAAGCGCACCATGCCATGACCATGTGCAGCAGCCTGATCT
GTGGCGCTCCACCGCACACCGCCGTCGCTCGAACAACATTTGCTCTCTTG
ACAAACGTTCCTTAACCAATCACAATCAGCTAAAGCACGAGGAAGCTTAC
ACAGCGAGCCATTTCAACGGAAGGGGGGGCAAGTATCCGTTCTCGATGAC
TCTTGGTCTTGATTATTGCTGGGGTTTCGGAACAGTTATATTTTGGCCTT
TGTTATTTGGCGTAGCGAGTTCAATTTCACAGCTTGGTCACACGCAAAAT
TCTTACTCGATGCCTTGGATATGGTGCAATGTGGTGCCAAATGTCAGGCC
CGCACTGGAATTTTTGAGGCATCTAGCTAAAAAAATAGAGTCTACCATCG
TGTTGCCCCGCCCTCCATTTGAAATGGTTCAGTACTAGGTGACATACGGG
ACAAGCGGGTCTCGTAACCTGAAAGAAGGTTCACGCAACACTTGCAGCTT
AACTTCCAAATTTGCTAGGCCACTATATCGACAGGGCTGTATGATATGTG
TTGGCTGCTGCTGACACGGTCAGAATAGTGATGTTGGCCAGTACATCAGC
AACGTTAATTTCAAAGCACGAATGGAGTCATTCCAGGGTAAAGTAGGGGT
ATTTGAACGGAGTCATCCTATGGTACGGGGGGGGAGTATTTGAGCCACTT
TATTTAACGAAGGGGCCACCTCTAAAAGGGGGTCAGGTGCTTGAATTTGT
GTTTTTGGCCTTTATCGACCCCCCTTCAACAGCAATCCTATTTCAACTCG
TGGACTGTGCATCTTTGGGATACACAAACACATGCACTTGACATGGTTTT
GATTGGCGCTATTTTTGCACCGCTTTTGCGACGCGACCTTCGTTACACAC
TTGACCTCCCCCTACCGTGGGATGAGTTAGCCGCTTTGTTTGACGAAGGA
GCCGCTTTGAGAAGGGGATCGGGCAGTGTACTTTCTTTTTTTTGCATTTG
CTGCCCTCCCTTAAACAGAAATCCCATTTCAACTCGTGGACTGTGCACCT
TTAGGGATGTACACATGCAATTGACAAGGTTTTGATTCGCGTTATTTTTG
CACTGATTTTGCGAAGCGGCCTTCGTTAAATAGTTGAGCCCTCCCCTTAC
CGTAGGATGACTCAATGTCAGGCACTCGATAAAAAAACTGATTCACGAAA
TCCGTAAAATACTCTTCGCTTGGACAGCACACATATCATTGCTACTGTTC
ACGACACACAGCGCTATTTACTTCCTCAGTCTCGTAAGTATACTCAGTTA
CGCTGGACTTTTTCTCCAAATCAATGAAAAAAATGGAATTCTACACTTTT
TGGGAGTTGAGCCTCAAATATTAAGTCAAATAGTTTGACTTTTATCACCA
AAGCAGACGCCGTGAAAACAAGTACTTGGCCGAAAAAAGATCGTTTTTTT
GGACTTCTTCTCATAGAACTGGAAAAAAAGCGTACAGTCGGCCGAGTGCT
TTTTTTCGCGGCGTGTGTTTTGGTGTTAAAGGTCAAATATTTGACTCGAC
ATTTTAGGGCTCAATGTCATAAGGGTCAGAGACGGTAGTAGCTAGAGTAG
GATTAAGAGAATGCCAGGGTTCACGCAGGAACTATAATATGTAGCTGTAG
TTCCTGCGTGAGTACGATCGCTCCCCCTTGCTAATCACTGTTACGCATAC
CTTTGGGTTTGGCGTCAAAGAGAACTGGGAGAGCTAATAAACGTGAGTCT
TCGAGGATAACTATAATCAATAATCTACGTGTGAACGATATCACAGAGAG
GTATAGGAGCCTCATCACATCAACCCCAAAACATATAGAATTCCATAAAA
AAAATCGGAGAGTTTTAAGTACCTCTATAATCGTAACTGATCTTACCTAT
GAGACAGGGGAAATATATGTCAGGAAGGATGCATCAAGTACAAGATCTCC
GAAAAATTTCCTCGATGGTGGCACGTGCGTATTTCGTTGTCAGTGAATCA
TGACTATGAGCAGGGCGTCCATGGTAATATACGGTGGTGGCTGTGATGTG
AATGAATTATCAAAATACTGGAGTGGTGGAAATGACCTTAAATAGCTAGT
GCTAGTAGATGCTAGTACCAGTTAGTTGCTACCGCGAGATATCGCGGGCT
GGTAAGTCGTTTCAACTGAAGATGCGGGGGCAAATATTAATTTTTGATGA
CGTTTTGTCTTGATTTTAGTGTGGCATCGTTTTAGAAAAACAATTTTTTG
GCCATTGTTTTTGGGCGTAGCGGATTTATTCTTACATCTTGGTCACATAA
GAGTATATTACTCGATGACTTGGGGCATTTTGCAATTTTGGTCCTCAAAC
TCAGGTCCGCAGTTGCACTATTTAAGCGTCTAGCTCGAAAAGTAGAGCTT
GCCGTCGAGTTGCCCCGCTTCAGTTGAAATTACTCAGTGTCTAGTCCTGA
ACATTTTACATGCTGTAAGTTTCGTACACGGATATGATACCTTCATCAAA
CATGAACCGTACGTTGTTGCTCTTATTCCTTCAATACTGCATGTTTGTGC
CCTCATCTTCTCCTTGGTTCGTGTGGATCCACCACCTGCGGTCAGTGTAC
AATGTAAAAACACGCGGGGCAAATACGTTCTATGGTTAGTATCTGAGAAG
CCATCACAGTTGTGGGCCTGATCCCTTGTCCCTCTCATAAACACCTGGCG
TCTTGTTTTTCTCAACGTTTGTGACCTTGACATACCCCCCCCCACCCCCC
GAATTTTGCTTCGCGCGTTTACTGTTCGGACCAGACCATCTTCATGTACG
ATCGGCAAAACTATCACAACCATTGATCAATCGTATCATCCTAGTACTGG
AGGCAATAACTGTCGCGGAACTGCAAGCAGCGGAGTCCCGATATCAGGGG
TTCCTGCCAACAACAAGCCCGCGAAAAGGTATTTGTGGAGGAATTCCTGG
CTTCGCTCGAGCAGTCGCGTCGCTGCCGAGGACGCTATTACTGGTGCTGA
TGTGCAGACGGGGCAACTGAATTGCGGGGTAACTATTCTTCGGGAAAACT
GATTGCAGGGTAACTGTTTTACGGTGGGTTATATCAAATTGTGTTTCGAT
GATTCCCATGGAGGAGGAAGGCGTTGCTCGGTTTGATAAATTTTTGGACC
GGCTTCCCCTTGAATGTGGATACGGACATCGACTGATGACGCCGATTGGT
TTTCAGTCGATAACCATCTCGGCGCGTGTGCGATTTCTTTTTATCGCTGA
TCGGTGTATCCCTGAATATTGTAGCAACGAATAATCACATGATAGATGAG
ATCAAGAGTGCTCTGAAAACCGAAAATGTACGGCACGTACTCTCGCGAAA
CCAACCAAATATACTCGCTCTCGTCTCGTCTGAGTTCTCGATTGCTTCTG
TGTTGCCAATCAAGCAACGAGTGGCCTTGTTTTGTGTCCTACATACACGT
GAAATCACCAACTTGTTTCTGATTATAGGCTTCGCCACGGCAAAATCTAC
TCACACCTCAAAAACATTATGAAGGCAACCCTTCCACGAGACCATGATTT
TTTCGCTGACCCAGCAAGGCCATAGCACTCAAGGGGAAAGCGGTAGACTG
TTTGCTATGGTAGTAAAAGCAGTATTCCATGATGAAACGCAAGCTGCGGC
GATGAATTTACTTTCGCTATAATTTGAAATAATTTCGCCGTTTGAGAAGC
AAGGTATGGAGGTGGAGGTGTAGACCAAGTTTGCTCTAGCCGCTTGGTGT
GTCTGCCAGCACCTCGAATTTCTAGCGTGAGAAAATGCCCAAGTAGCTTC
GAACCGCGCTCGAAAGAAAAATGAGATTTATCGCACATTGTACCCACACT
ATGTAAAATTCAAACTTGTGACACGTTCACGTGCCGCGTTTTTGGTATCA
ACGTTCCAGGAGGACAAACCGGGTAAAGGAGAGCGATTGGGAAACTCGAG
TGCGCGTTGGCAAAGAATGGCAGGTAAAAATATAGGGATCACGAACGTAA
AACCAAGCAATCGCCTTGCATGCACCTGTGTTATGTACACATCCATGTTG
GTCTCGGCGTTCAAGCAGGAAATAACAGCTAGTGGAGAAAACACATAAGA
ACGCTGCAGACGTCGTCGATAGAAAGCGAAATTTGGCGAGTATTCTAAAA
AGAAAATTCCGACTGCCGCAGGAAACGTTCAGGTTTCATCGAGGCAACTG
CGGCATCCCAAATAATGAATTGCATTCAGCATGTACCAGTCCGTATACGG
CGTTCCTACTACACCCACGACGAATAACTGTATGTGGTATTTTGGTGTTT
GGTTGTCTGAGGACATTCTGAAATATCCAGGGGTTTTCCCTATGGAGACA
TATGTCATATCACGTTGTTTTTTTATCCTCAAGAGTCCAAGGCAAAACCT
TGAACCTTTGCTGATATTTATACAGCACGTTAACGTCACACCTGTCGTGT
ATCGGTTACACTTTGATGTCTTGGTCATCTTTTACTCAACCAGTATCCGA
GCTCCGTATACAACAACCTGGAAGGGGATTGCTGCAAATAGAGGCGGCTA
TGTGCGACTATCAACTAAAGAGGCAATGGGGCACTCGAGTCAGAGAAGCG
ATTCGCATCCAACAAACCTTTCAGACGCCTCCTAGATTTTCGCTGTTCAC
GAGCTACCCTACCCATTTGGTCTTCGGTCCGTATATATTTCGGATCACGT
GTAACGGCAACTGTTGGATGTCGACAACACAGTATGGTACCTTGCGCCCT
AGCCTATGTCGCTTCATCGCATGTACAGATAGGCTGCCCGTCGAGAGTTG
GTGCAATGGTTTTTCAACCAGATGTCGAGTGAAAATCAATGTTAGTTAGC
TACCCGGCGTTGAATTTACTTGATATTTTGTGTCATGCTATAGGAGGAGA
GATTTTCATATTTTTACCTTGATGAACCCCCTCGACGGAGGAAATATACA
TCTTGGCATAAAACTTAATCCCACATCCTAAACCCTAACCCTAGCACTAC
TTATAGCCTGCAAAACGTGTATACAATGTTATCTGCTCTGGGGCTCCTGT
GTATGCTCCAAAGCGCTACAAGGCTACAATTCGTGGGGTATGCTGCTCTC
TTTGAGCCCCGGAATAGAAGCTCACATGGCGCGAAAACATCCCGACAACG
AATCAGCCAAAAACAAAAACAAAATTCTCAATTTTTTTACATGTTGTCTA
GTTTTAGCAGCGAAATTATGCTCAACTGGTTGTCCCCATACTGCCTCCTA
TATAGTGAATACAGGAGATTCATCTTTTGGGAGGGGCAGCAAGTACACCA
AGGTTTTGAGCCTCACCGCAAGTAAAAGCTCCTTGTCAACGGGCCCGTGC
CGTAGTCGAAAAGAGCGCTATAGCTTCATTACGATTACACCGTGGATGAG
TAATCAGTTGGACGTTCTTATATTCACGAAGCACTAGATCTTGGACTATG
AACTGGAGTGACAGTTCAAGGGGGGTCTGCAGGCACTGTCAAATTTACCT
CGATGTTTGATCGCATGTTCCCCTTAGACCGGTATTGGTAAGAGGAAGCA
CAACGGTAGTGCGCTTAGCTGCGAGTTTGAGCTCAACATACGCGTTCATT
TTTTACACACATTTGTTATCACGGGGTTAAGCAAAGGAGAACAATCTAAA
GCTATTCTTATTCTTATCGTGTCTGCAGGCCTACATCTCTCTCTCCTAAC
AAGCAATTGCTTCTTAATTTGCGATGTCGATCGGAGTGGTAGTAGTAATA
ATTGCCTTTAAGACCTATCAGTGGTTCTTGGTTCCGAGTTTCACACAGCA
GGCAATGTTGTTGATGTTTGCTATTTTTTCAAAGCAGGCAGGTGATTGCT
TTTTAGGCGGTAGTTCCTTGAGCCTCCTGCTATTGATGGGTGATATAAAT
GCAAATTATTAGTCATTATCCGTTATGTGAACGGTCTCCGGTCGCCACTC
GTGCGGTACGATTGTGTCATGTTGTGCGTCTGCCTCTCTCACAGCGCTCG
TTAATACATCCTCGGGGGGCAGGAGGACGTCCCCGGGAAAACGGCGACCT
CCTGCGATAACTGTTCCTCAAGATGGCCGCTGGCAGCCTCTCAGTCCCTG
GCAAGTTATCTGCCAGCTCCCTAATGTCCTTGAATTCCCTAGTTTTGTTC
AGTTTGTGGAAATGACAAATAATCCAACAATTTGAAAATGTTGAGCATGC
CTCTATTTTGTTCTACGGTAATTGTCATGTTTCCAAGAGTAATTTTGACA
TATCTTCTCCTACTTGACTTTACTCCCCGCGTCCTTAGTCTGTTAACAAA
GGTGGGAAGTACTGATCAGCCATCGGAGATATATTTGACACGGAGATCAG
AATTCCGTCCTCTCGAGGACGCGTAGTCAATGATCTCTCAACGACGGCAT
GCGAAGCATGAGTAAGCCAACTTTGGAGTCTTGTTTTCGCTTTGTTTCGC
CTTTGTGTTGGTGTAGAACTATATGTATAAGTATTATGTTTGCCTTCTGT
GGCATTGGTTGGATGCCCGTACTCTATGCTGATTGGTTGTGCTCGATTGG
TCGTTGTAGGTTGCTCACTTGAAACCGTCAACATCAGTTGAAACCATAAA
ACAGCGTGTGAATATAGGTTGGGCCTCGTGTTTACGCCCTCCACTTTTGT
GCCCTTGTTCGCTCTTGCCAGAGTTAACTCCGTATCCCCAATTGCTGTTA
GTCATAGGCCATAGCGTGTATTCCGGAAAAAGACTTTAGCATGTGCCAGA
ATTACCTGTGGAAGGCAGAACACACTCTTGAAAGTATGCCACCGTACATT
CCACACACGAACGAGCGAGTGGGACTGCTATCCCCACCGCGCTACAATCC
AAGACAATTACCGAGGCAGTATACGACCAGCTTCGGTCGGGTGGTGTACC
TAGACTTTTGTTTACAAAACATTACAAACTACTTGGATACCTTTCAAAAC
GCTTACAAATCCCCTCCCCTTTCTCGTCACTGTTCCGTCCTCTCTCGGGA
CGTGTGCTTCAACAATCTGACGGCTGAGGCATTCCGAAACACGTCTCCAG
CCCTTATCATACCGCCCAAATCACCCCCTTCCCCCCCTTCATTCAACAGC
ACCGCGGATCGTTTACTGGGCCAGGGTATGGGAAATTACGAGGAGCCCCT
GTCGCCGGGGGGATCTCCCCGGTTTTCTAGCCGAAGGAGGCCGGATTCTA
G back to topCoding sequence (CDS) from alignment at H-paniculata_contig1303:3863..11513+ >mRNA_H-paniculata_contig1303.1899.1 ID=mRNA_H-paniculata_contig1303.1899.1|Name=mRNA_H-paniculata_contig1303.1899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=636bp|location=Sequence derived from alignment at H-paniculata_contig1303:3863..11513+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATACTAGGAGCGTAGATTACTTACCGCAGAAAAATACAGGAGGCCGGAG
CTTCCTGAAAAAATTACGAACAATCGGACCATCTTCTAGTAGCCACTACC
TATCTTGGAGTTCTGCGTCTGCAAGAATACTAGGAGCGTAGATTACTTAC
CGCAGAAAAATACAGGAGGCCGGAGCTTCCTGAAAAAATTACGAACAATC
GGACCATCTTCTAGTAGCCACTACCTATCTTGGAGTTCTGCGTCTGCAAG
ACCATCTTCATGTACGATCGGCAAAACTATCACAACCATTGATCAATCGT
ATCATCCTAGTACTGGAGGCAATAACTGTCGCGGAACTGCAAGCAGCGGA
GTCCCGATATCAGGGGTTCCTGCCAACAACAAGCCCGCGAAAAGGTATTT
GTGGAGGAATTCCTGGCTTCGCTCGAACCATCTTCATGTACGATCGGCAA
AACTATCACAACCATTGATCAATCGTATCATCCTAGTACTGGAGGCAATA
ACTGTCGCGGAACTGCAAGCAGCGGAGTCCCGATATCAGGGGTTCCTGCC
AACAACAAGCCCGCGAAAAGGTATTTGTGGAGGAATTCCTGGCTTCGCTC
GAGAGGACAAACCGGGTAAGAGGACAAACCGGGTAA back to top
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