mRNA_H-paniculata_contig13.1887.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: D7FJM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM0_ECTSI) HSP 1 Score: 378 bits (971), Expect = 5.200e-118 Identity = 236/450 (52.44%), Postives = 305/450 (67.78%), Query Frame = 2
Query: 347 LSNPCPICR---EGTLAGSRCPIAADWGDGERMSFLTSHVSLEDLSDHQSHAREQIVEFWSKALGHAFECSSGLSLDLEAVVKGPLAWYGAVAPGLELAVRSMTSSGKLVYREEI-EAEKGLARQLVETPLVYLFSMLRLDGRKRNVPTGQYVHKGVLESVADQLVQHCQNLPEEERTVYLNAAPQHGDALGQAVQQQQTMPPWSFQQLCAAAATHPGAHGRKCDPASGNSGISTPSNVSA----LLSKLSGDDLELLAQHLVRTKHAVKDTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVL-RDPDEEAELE 1669
+ + CPIC G CP+AAD D ERM FLTSHV+ D+ AR+++VEFWS+ + HAFE ++ LSLD + + L W G VAPGL+LA+ M SSG+L+ R EI EAE GLAR+LV P++YL M+ L G GQY ++ VLE +A+Q+V +CQ+LP +ERTVYL AA A + V Q + PW+F+QLC AAA+ A ASG + TP S+ +L+++S DD+ L A++LVRTK AV T+G +LKVL+RGG R A A ++SE +KDLLRLRCTV+SL+A+ S L R+ ++QDAL N+ GQK+ ALVH+RRMKQ QAARD RLS+L TLE AL QV +LR+DKQVLEAHEAAT ALK+CRE GLTVERVENTLDALAEEMA+ +A+G+AL Q +L +D E AELE
Sbjct: 1 MPSSCPICAVSGAGAELAPACPLAADLEDEERMEFLTSHVAPGDVD-----ARDEMVEFWSRVVAHAFEKAACLSLDSKVLATSSLDWGGVVAPGLDLAMSHMVSSGELLERSEIVEAETGLARRLVMAPIMYLAGMVGLGGXXXX---GQYANRNVLEDLAEQVVGYCQHLPPDERTVYLLAAVHSETAASRPVAQHAS--PWNFEQLCRAAASEAAATTTATRVASGRA-PPTPEKCSSAVPRMLARISSDDVALFAKYLVRTKRAV--TEGGLLKVLSRGG----GSRVAAAAATVSETEKDLLRLRCTVASLEASASDLGLRIQRVQQDALMENRRGQKQAALVHLRRMKQYQAARDKRLSSLLTLETALDQVKQLRLDKQVLEAHEAATSALKACRETQGLTVERVENTLDALAEEMAEAEAVGTALGQDGALLGQDEGETAELE 433
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: A0A6H5L709_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L709_9PHAE) HSP 1 Score: 342 bits (877), Expect = 2.450e-104 Identity = 233/456 (51.10%), Postives = 290/456 (63.60%), Query Frame = 2
Query: 359 CPICREGTLAGS---RCPIAADWGDGERMSFLTSHVSLEDLSDHQSHAREQIVEFWSKALGHAFECSSGLSLDLEAVVKGPLAWYGAVAPGLELAVRSMTSSGKLVYREEIEAE--KGLARQLVETPLVYLFSMLRLDGRKRNVPTGQYVHKGVLESVADQLVQHCQNLPEEERTVYLNAAPQHGDALGQAVQQQQTMPPWSFQQLC--AAAATHPGAHGRKCDPASGNSGISTPSNVSA----LLSKLSGDDLELLAQHLVRTKHAVKDTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVL-RDPDEEAELEKELKDLL 1690
CPIC A CP+AAD GD ERM FLTSHV+ D+ AR+++VEFWS+ + HAFE ++ LSLD + +V L W G VAPGL+LA+ M SSG+L+ R EI K V T V + LR+ G+ RNV LE +A+Q+V +CQ+LP E TVYL AA H +A Q P W+F+QLC AAAA A ASG G TP S +L+ +S DD+ L A++LVRTK AV T+G +LKVL RGG A GA ++SE +KDLLRLRCTV+SL+A+ S L R+ ++QDAL N+ GQKR ALVH+RRMKQ QAARD RLS+L TLE AL QV +LR+DKQVLEAHEAAT ALK+CRE GLTVERVE+TLDALA EMA+ +A+G+AL Q +L +D E AELE EL LL
Sbjct: 5 CPICAVSGAAAELAPACPLAADLGDEERMEFLTSHVAPGDVD-----ARDEMVEFWSRVIAHAFEKAACLSLDSKVLVTSSLDWGGVVAPGLDLAMSHMVSSGELLERSEIVVFMWKVKGSFAVVTFFVLMLRPLRI-GKNRNV----------LEDLAEQVVGYCQHLPPNESTVYLLAAG-HSEASASCPVAQHASP-WNFEQLCRTAAAAAEDAATATATRVASGR-GPPTPEKCSVAAPRMLAHMSSDDVALFAKYLVRTKRAV--TEGGLLKVLFRGGGNRVAAAGA----TVSETEKDLLRLRCTVASLEASASDLGLRIQRVQQDALMENRRGQKRAALVHLRRMKQYQAARDKRLSSLLTLETALDQVKQLRLDKQVLEAHEAATNALKACRETQGLTVERVEDTLDALAGEMAEAEAVGAALGQEGALLGQDEGETAELEAELDALL 435
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: A0A8H8MSP8_9AGAM (Vacuolar-sorting protein SNF7 n=3 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MSP8_9AGAM) HSP 1 Score: 82.0 bits (201), Expect = 1.550e-12 Identity = 69/211 (32.70%), Postives = 108/211 (51.18%), Query Frame = 2
Query: 1070 LSGDDLELLAQHLVRTKHAVK-DTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVLRDPDEEAELEKELKDLLQEN 1699
LS D+ +L +HL R + V D D++K + G + A IS +DK +L + TV+ LQ + +R+ E + ++ Q AL +R KQ ++ RL L T++ AL +V D +++A+E +T LK L ERV+ T+D +AE +AD + I A+A G L DP E+ EL KEL+ L++EN
Sbjct: 215 LSETDVRVLVRHLERDRSCVVVDGQADIIKFIEEGQSEHEA---------ISNIDKGILEMSNTVNKLQEQVDEIHRRIEERAEKINAMLRKKQNDLALSLLRSRKQLESLLKLRLGALETVQTALMKVETAAGDVAIMKAYETSTATLKELLADPRLRRERVDQTMDNMAEALADHKEIEDAIALGG-ALSDPAEDEELAKELQALVEEN 415
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: A0A8H7IFR2_9AGAM (SNF7 family n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7IFR2_9AGAM) HSP 1 Score: 79.7 bits (195), Expect = 5.390e-12 Identity = 62/215 (28.84%), Postives = 112/215 (52.09%), Query Frame = 2
Query: 1070 LSGDDLELLAQHLVRTKHA-VKDTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVLRDPDEEAELEKELKDLLQENNNVA 1711
LS D+ +L +HL R ++ V D DV+K + G +G I+ +DK +L + T++ LQ +++R+ E + ++ QK AL +R K+ +A RL L T++ AL ++ D +++A+E +T LK L E ++ T++ +A+ +AD + + A+A G + DP E+ EL +EL++L++EN A
Sbjct: 149 LSEADVRVLVKHLERDRNCIVVDRQVDVIKFVEEGSSGREG---------ITSVDKGILEMSVTLTKLQEQVDEIQKRIEERSEKISALLRKKQKELALSMLRSRKELEALLKLRLGALETVQTALMKIETAAGDIAIMKAYETSTATLKELLADPRLQREHIDQTMENMADALADHKEVEEAIALGG-LPSDPTEDEELARELQELVEENEREA 353
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: L8X8S5_THACA (Snf7 domain-containing protein n=5 Tax=Rhizoctonia solani TaxID=456999 RepID=L8X8S5_THACA) HSP 1 Score: 78.2 bits (191), Expect = 2.660e-11 Identity = 62/215 (28.84%), Postives = 110/215 (51.16%), Query Frame = 2
Query: 1070 LSGDDLELLAQHLVRTKHA-VKDTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVLRDPDEEAELEKELKDLLQENNNVA 1711
LS D +L +HL R ++ V D DV+K + G +G I+ +DK +L + T++ LQ +++R+ E + ++ QK AL +R K+ +A RL L T++ AL ++ D +++A+E +T LK L E ++ T++ +A+ +AD + + A+A G + DP E+ EL EL++L++EN A
Sbjct: 228 LSEADARVLVKHLERDRNCIVVDRQVDVIKFVEEGSSGREG---------ITSVDKGILEMSVTLTKLQEQVDEIQKRIEERSEKISALLRKKQKELALSMLRSRKELEALLKLRLGALETVQTALMKIETAAGDIAIMKAYETSTATLKELLADPRLQREHIDQTMENMADALADHKEVEEAIALGG-IPSDPTEDEELAGELQELVEENEREA 432
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: A0A165KX28_EXIGL (Uncharacterized protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165KX28_EXIGL) HSP 1 Score: 75.9 bits (185), Expect = 1.390e-10 Identity = 61/209 (29.19%), Postives = 109/209 (52.15%), Query Frame = 2
Query: 1070 LSGDDLELLAQHLVRTKHAVKDTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVLRDPDEEAELEKELKDLLQE 1696
LS D+++L ++L R K + D +V+K + TA SI+E+D+ +L ++ V L+ + +++++ + A + QK A+ ++R KQ + RL L TL+ L + R D ++++A+E + + L++ + L ERV+ TLD +AE +AD + I A+ G + D DE+ EL KEL L+ E
Sbjct: 216 LSDTDIKVLIRYLSRDKRCIV-ADKEVVKFV----------EVDSTATSITEVDRGVLEMQMAVERLETQVEDIRKQIAQRTERIATALRAAQKTLAMSYLRSRKQLEDLLSKRLGALDTLQSQLSAIERAVGDAEIMQAYETSARTLRTALQNPLLQRERVDATLDDMAEALADQREIDDAIRAGEAGVVDADED-ELAKELAGLVDE 412
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: A0A8H3D9P4_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3D9P4_9AGAM) HSP 1 Score: 75.1 bits (183), Expect = 2.160e-10 Identity = 62/212 (29.25%), Postives = 107/212 (50.47%), Query Frame = 2
Query: 1067 KLSGDDLELLAQHLVRTKHAVK-DTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVLRDPDEEAELEKELKDLLQEN 1699
+LS D +L +HL R + V D DV+K + G +G I+ +DK +L + T++ LQ +++R+ E + + QK AL +R K+ +A RL L T++ AL ++ D +++A+E +T LK L E ++ T++ +A+ +AD + A+A G V DP E+ EL +EL+ L++EN
Sbjct: 192 ELSETDARVLVKHLERDRGCVVVDRQEDVIKFVEEGSSGREG---------ITSVDKGILEMSVTLAKLQEQVDEIQKRIEERVEKINTLLHKKQKELALSMLRSRKELEALLKLRLGALETVQTALMKIETAAGDIAIMKAYETSTATLKELLADPRLQREHIDQTMENMADTLADHNEVEEAIALGT-VPSDPAEDDELARELQQLVEEN 393
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: A0A167NM73_CALVF (Uncharacterized protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167NM73_CALVF) HSP 1 Score: 75.1 bits (183), Expect = 2.390e-10 Identity = 96/377 (25.46%), Postives = 164/377 (43.50%), Query Frame = 2
Query: 698 LARQLVETPLVYLFSMLRLDG----------RKRNVPTGQYVHKGVLESVADQLVQHCQNLPEEERTVYLNAAPQHGDALGQAVQQQQTMPPWSFQQLCAAAATHPGAHGRKCDPASGNSGISTPSNVSALLSKLSGDDLELLAQHLVRTKHAVKDTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVLRDPD----EEAELEKELKDLLQENNNVAGTPTPVVVASATDSGPGGQEIVARP 1786
+A LV PL YL S LRL G + G+Y+ K LE AD ++ H ER+ NA D L P SFQ+ A PG LS D ++L +HL R + A+ T +++K L S+ I+++D+ +L ++ + L+ S +++R++E ++ + Q+ TAL ++R +Q + R S+L TL+ L ++ D +V++A+E ++ L++ L ERV+ T++++AE +AD + I A+ G E R +E E+EKEL+++++E V + P G+ ARP
Sbjct: 127 IASTLVGQPLWYLLSQLRLVGDPLPAEESTAARWKRAKGKYILKANLEKAADAVLNH-------ERS---NAHVSITDRL---------YTPASFQKEFGDLAL-PGV-------------------------TLSATDTKVLLKHLERDRRAIV-TSNEIIKFLDEHEPESTT---------ITQVDRGVLEMKLAIQRLEEQISEIDRRITERTSKVKESLGKKQQETALSYLRSRRQLEEVLAKRTSSLETLQTVLLRIEAAAGDVEVMKAYETSSATLRTLLRDPRLQRERVDQTMESMAEALADHREIERAVEMGGEDARAAAGLEIDEREIEKELEEIVREXXXXXXXXREVRLPQPPSGMPTGERESARP 448
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: A0A0B7F270_THACB (Uncharacterized protein n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=A0A0B7F270_THACB) HSP 1 Score: 73.6 bits (179), Expect = 7.260e-10 Identity = 62/211 (29.38%), Postives = 108/211 (51.18%), Query Frame = 2
Query: 1070 LSGDDLELLAQHLVRTKHA-VKDTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVLRDPDEEAELEKELKDLLQEN 1699
LS D+ L +HL R + V D DV+K + G SS G I+ +D+ +L + T++ LQ +++R+ ++ QK AL +R K+ +A RL L T++ AL ++ D +++A+E +T LK L E ++ T++++A+ +AD + + A+A G V DP E+ EL +EL+ L++EN
Sbjct: 212 LSETDVRALVRHLERDRSCMVVDRQADVIKFVEEG---SSDREG------ITSVDRGILEMNVTLNKLQEQVEEIQKRIXXXXXXISALLRKKQKELALSMLRSRKELEALLKLRLGALETVQTALMKIETAAGDIAIMKAYETSTATLKELLADPRLQREHIDQTMESMADALADHKEVEEAIALGG-VPSDPTEDDELARELQQLVEEN 412
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Match: A0A4Q1B9S4_TREME (Uncharacterized protein n=2 Tax=Tremella mesenterica TaxID=5217 RepID=A0A4Q1B9S4_TREME) HSP 1 Score: 72.0 bits (175), Expect = 2.970e-9 Identity = 58/215 (26.98%), Postives = 111/215 (51.63%), Query Frame = 2
Query: 1067 KLSGDDLELLAQHLVRTKHAVKDTDGDVLKVLARGGAGSSAGRGAGTAGSISEMDKDLLRLRCTVSSLQANTSSLEQRVSELRQDALKANKEGQKRTALVHMRRMKQCQAARDNRLSTLYTLEGALGQVNRLRVDKQVLEAHEAATKALKSCREKHGLTVERVENTLDALAEEMADTQAIGSALAQGNEVL-RDPDEEAELEKELKDLLQENNNV 1708
KLS D+++L + L R V TDG+V+K+L+ G S I+E D+ L++ T+ + LE+ + ++ A K GQ+ A+ +R K + + RL L + ++ + D +V+ A++ +T L+ L++++VE T +ALA +AD + + A+A G ++L ++ +E +LEKEL+ ++++ V
Sbjct: 242 KLSDQDMKVLLKWLERDC-GVLVTDGEVIKILSENQIGES----------ITEADRGTLQVLTTLRKVDEQVEKLEEEIQLCQEKAKKYLSSGQRTLAISRLRSKKALEDVLEKRLGAGEKLRAVVRSFDQAQTDVEVMAAYQTSTSTLRQLLSHPSLSLDKVEETTEALASALADQREVDDAMAIGEKILGQNAVDEDDLEKELEAMVRDAEEV 445 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13.1887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13.1887.1 >prot_H-paniculata_contig13.1887.1 ID=prot_H-paniculata_contig13.1887.1|Name=mRNA_H-paniculata_contig13.1887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=519bp MLSNPCPICREGTLAGSRCPIAADWGDGERMSFLTSHVSLEDLSDHQSHAback to top mRNA from alignment at H-paniculata_contig13:53433..64686- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13.1887.1 ID=mRNA_H-paniculata_contig13.1887.1|Name=mRNA_H-paniculata_contig13.1887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11254bp|location=Sequence derived from alignment at H-paniculata_contig13:53433..64686- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13:53433..64686- >mRNA_H-paniculata_contig13.1887.1 ID=mRNA_H-paniculata_contig13.1887.1|Name=mRNA_H-paniculata_contig13.1887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3114bp|location=Sequence derived from alignment at H-paniculata_contig13:53433..64686- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |