mRNA_H-paniculata_contig1298.1873.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1298.1873.1
Unique NamemRNA_H-paniculata_contig1298.1873.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: A0A6H5J9S4_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S4_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 8.520e-58
Identity = 101/146 (69.18%), Postives = 115/146 (78.77%), Query Frame = 3 
Query:  879 GNAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAIQFYYDLESLEEEDLPEHLRS 1316
            G A +  V    D++D G K         VWGTF+IK NFPGRCSH CNGGFITDPRRRRRGV + MG AFL+ AKDLGY+ASYFNLVFR+NEASLRLWR LGFTELAVVPKAA LKGI+GLVDA QF+YDL++L +EDLP+ LR 
Sbjct:  152 GKAGSTAVGEEDDERDAGVK---------VWGTFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLVDASQFHYDLDNLRQEDLPQDLRE 288
[Close]
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: A0A7S2XXY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY2_9STRA)

HSP 1 Score: 187 bits (474), Expect = 7.420e-51
Identity = 94/155 (60.65%), Postives = 113/155 (72.90%), Query Frame = 3 
Query:  816 KGLSWPFEDQLDAEGFKSYFLGNAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAIQFYYDLES 1280
            +GL+WPFE+++  EGF+SYFL +AA FVVR   +              SEV G F+IK NFPGRCSH CNGGFIT P  RR G+ K MG  FL++AKDLGYKASYFNLVF TN AS++LW+ LGF  +A VPKAA LKGI+G  DA+QFYYDLE+
Sbjct:  102 EGLAWPFEEKMTMEGFRSYFLSHAA-FVVRKAEEP-------------SEVLGMFYIKPNFPGRCSHICNGGFITLPEYRRLGIAKLMGHNFLRMAKDLGYKASYFNLVFVTNTASIKLWKKLGFRCIARVPKAARLKGIDGCTDALQFYYDLEN 242
[Close]
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: A0A835ZBA6_9STRA (Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA6_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.370e-47
Identity = 93/150 (62.00%), Postives = 103/150 (68.67%), Query Frame = 3 
Query:  846 LDAEGFKSYFLGNAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAIQFYYDLESLEEED 1295
            LD + FK YFL + A FVVRA      D G          V G F+IK NFPGRCSH CNGGFIT+P  R RGVG  M  AFL LA+D+GYKASYFNLVF  N AS  LW  LGFT LAVVPKA  LKG++GLVDAIQ+YYDLESL + D
Sbjct:    2 LDVDAFKGYFLSHNA-FVVRAV-----DSG---------HVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDAD 136
[Close]
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: A0A7S4SMR7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SMR7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.950e-46
Identity = 84/160 (52.50%), Postives = 111/160 (69.38%), Query Frame = 3 
Query:  816 KGLSWPFEDQLDAE-GFKSYFLGNAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAIQFYYDLESLEEE 1292
            +G +WPFE     E  ++SY+L +AA FVVR   D       K       EV GTF++K NFPGRCSH CNGGFITDP+ R  GVG+ MG +FL LA+DL YK++YFNLVF++N  S++LW +LGFT +A +P AA L+G++GL DA  +Y+DL +L EE
Sbjct:  110 EGRAWPFEPTFPTEESYRSYYLSHAA-FVVRCVVDNDASELDKSSSPTHGEVMGTFYVKPNFPGRCSHVCNGGFITDPKFRGSGVGRLMGSSFLALARDLQYKSAYFNLVFKSNPVSIQLWESLGFTRVATIPNAARLEGVDGLDDAYGYYFDLTTLPEE 268
[Close]
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: D7FSN4_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN4_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.670e-45
Identity = 85/122 (69.67%), Postives = 94/122 (77.05%), Query Frame = 3 
Query:  882 NAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLV 1247
            NA +  V    D + D G K        VWG F+IK NFPGRCSH CNGGFITDPRRR+RGV + MG AFL+ AKDLGY+ASYFNLVFR+NEASLRLWR LGFTELAVVPKAA LKGI+GLV
Sbjct:  153 NAGSTAVEEEEDNERDAGMK--------VWGAFYIKPNFPGRCSHVCNGGFITDPRRRQRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLV 266
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BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: A0A7S3M1P3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1P3_9STRA)

HSP 1 Score: 163 bits (412), Expect = 8.170e-43
Identity = 89/162 (54.94%), Postives = 108/162 (66.67%), Query Frame = 3 
Query:  813 VKGLSWPFEDQL-DAEGFKSYFLGNAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAIQFYYDLESLEEED 1295
            V+G +WPF D   D + +KSYF  ++A F V+ F D    G          +V G F+IK NFPGRCSH CNGGFIT+P  R  GVG FMG  F +LAKDLGY+AS FNLVF  N AS++LWR LGFT+LAV+PK A L+G EG VDA QF+ D  + E ED
Sbjct:   64 VEGKTWPFMDVFEDLDSYKSYFHSHSA-FAVK-FQDTAVHG---------DDVLGCFYIKPNFPGRCSHVCNGGFITNPSYRGLGVGAFMGENFKRLAKDLGYRASLFNLVFANNIASVKLWRKLGFTQLAVIPKVAVLEGSEGYVDAYQFHCDFYAEESED 214
[Close]
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: A0A1Z5JQ04_FISSO (N-acetyltransferase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQ04_FISSO)

HSP 1 Score: 157 bits (397), Expect = 7.780e-41
Identity = 83/159 (52.20%), Postives = 106/159 (66.67%), Query Frame = 3 
Query:  816 KGLSWPFEDQLDA-EGFKSYFLGNAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAIQFYYDLESLEE 1289
            +G SWPFE + +  E ++ YFL +AA FVVR            C++    EV G F+IK NFPGRCSH CNGGFIT P  RRRGV   MG  FLK A  LGYK++YFNLVF++NEAS+ LW +LGF  +AV+ +AA LKG++ L  A  + YDLE ++E
Sbjct:   58 EGRSWPFESEFETLEAYRGYFLSHAA-FVVR------------CLET--KEVAGCFYIKPNFPGRCSHICNGGFITHPDYRRRGVAHLMGKVFLKAAHQLGYKSAYFNLVFQSNEASVALWESLGFQRVAVLEQAARLKGLDKLDTAYGYRYDLEKMDE 201
[Close]
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: B8BXU1_THAPS (N-acetyltransferase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU1_THAPS)

HSP 1 Score: 156 bits (394), Expect = 4.390e-40
Identity = 83/164 (50.61%), Postives = 109/164 (66.46%), Query Frame = 3 
Query:  816 KGLSWPFEDQLDA-EGFKSYFLGNAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGI-EGLVDAIQFY-YDLESLEEEDL 1298
            +G SWPFE++  + E +  YFL + A FVVRA  +  D    K     K E+ G F+IK NFPGRCSH CNGGFI  PR R  GVG+ MG  FL+ ++DLGYK+SYFNLVF++N  S+ LW +LGF  +A + KAA L+G+ EG++D    Y YDLE L ++ L
Sbjct:   65 EGRSWPFEEEFSSVEQYSGYFLSHTA-FVVRALNNGMD--ASKRNSSSKGEILGCFYIKPNFPGRCSHICNGGFIVAPRFRGLGVGRLMGNVFLRASRDLGYKSSYFNLVFKSNPGSIHLWESLGFQRVATLEKAARLEGMNEGVLDTAYGYRYDLEELPDDYL 225
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BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: A0A507FPU4_9FUNG (N-acetyltransferase domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FPU4_9FUNG)

HSP 1 Score: 155 bits (391), Expect = 5.790e-40
Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 3 
Query:  816 KGLSWPFEDQLDAEGFKSYFLGNAAAFVVRAFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAIQFYYDLESLEEE 1292
            +G ++P+E  +D + FK+YFL +A+AF++ + PD             +S++ GTF+IK N+PGRCSH CNGGFIT+ + R +GVGK M  AFL LA  LGYKAS FNLVF TN  S+ LWR+LGF E+  +PKA  L G +  VDAI FYYD + +E +
Sbjct:   63 RGDTYPYEFIMDDDAFKAYFL-SASAFMISS-PD-------------RSQIMGTFYIKPNYPGRCSHVCNGGFITNSQFRGKGVGKLMAEAFLTLAPLLGYKASVFNLVFETNTPSVNLWRSLGFKEVGRIPKAGRLNGHDKRVDAIVFYYDFDDVENK 206
[Close]
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Match: A0A7S2H5G4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5G4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.010e-39
Identity = 76/150 (50.67%), Postives = 102/150 (68.00%), Query Frame = 3 
Query:  861 FKSYFLGNAAAFVVR------AFPDQKDDGGKKCVQDIKSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAKDLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAIQFYYDLESLEEE 1292
            ++SYFL +AA FVVR      A      +           ++ GTF++K NFPGRCSH CNGGFITDP+ R  GVG+ MG +FL LA+DL YK++YFNLVF++N  S+RLW +LGFT +A +P AA L+G+EGL DA  +Y+DL  L ++
Sbjct:    1 YRSYFLSHAA-FVVRSVAAGEATTTTAPNNSPSTNIINPGKILGTFYVKPNFPGRCSHVCNGGFITDPQFRSIGVGRLMGSSFLALARDLQYKSAYFNLVFKSNPVSIRLWESLGFTRVATIPNAARLEGVEGLDDAYGYYFDLTGLPDD 149
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1298.1873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9S4_9PHAE8.520e-5869.18N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2XXY2_9STRA7.420e-5160.65Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZBA6_9STRA1.370e-4762.00Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus... [more]
A0A7S4SMR7_9STRA3.950e-4652.50Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
D7FSN4_ECTSI1.670e-4569.67N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S3M1P3_9STRA8.170e-4354.94Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A1Z5JQ04_FISSO7.780e-4152.20N-acetyltransferase domain-containing protein n=2 ... [more]
B8BXU1_THAPS4.390e-4050.61N-acetyltransferase domain-containing protein n=1 ... [more]
A0A507FPU4_9FUNG5.790e-4050.31N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2H5G4_9STRA1.010e-3950.67Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1298contigH-paniculata_contig1298:23118..27558 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.2
Seed ortholog evalue2.1e-40
Seed eggNOG ortholog2880.D7FSN4
Preferred nameSPT10
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000183,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004402,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006520,GO:0006525,GO:0006526,GO:0006560,GO:0006562,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010484,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016053,GO:0016054,GO:0016407,GO:0016410,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0030466,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032931,GO:0033554,GO:0034212,GO:0034641,GO:0036211,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043543,GO:0043565,GO:0043966,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046941,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097043,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1902679,GO:1903506,GO:1903507,GO:1990841,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.N-acetyltransferase activity
EggNOG OGs2QRFX@2759,COG0454@1
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-07_002520.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1916
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1298.1873.1prot_H-paniculata_contig1298.1873.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1298 23715..26752 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929024.6398518-UTR-H-paniculata_contig1298:23117..237141622929024.6398518-UTR-H-paniculata_contig1298:23117..23714Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1298 23118..23714 -
1691480703.8450696-UTR-H-paniculata_contig1298:23117..237141691480703.8450696-UTR-H-paniculata_contig1298:23117..23714Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1298 23118..23714 -
1622929024.7474246-UTR-H-paniculata_contig1298:26752..275581622929024.7474246-UTR-H-paniculata_contig1298:26752..27558Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1298 26753..27558 -
1691480703.9001446-UTR-H-paniculata_contig1298:26752..275581691480703.9001446-UTR-H-paniculata_contig1298:26752..27558Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1298 26753..27558 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929024.6809492-CDS-H-paniculata_contig1298:23714..237891622929024.6809492-CDS-H-paniculata_contig1298:23714..23789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1298 23715..23789 -
1691480703.858007-CDS-H-paniculata_contig1298:23714..237891691480703.858007-CDS-H-paniculata_contig1298:23714..23789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1298 23715..23789 -
1622929024.6977868-CDS-H-paniculata_contig1298:25012..251171622929024.6977868-CDS-H-paniculata_contig1298:25012..25117Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1298 25013..25117 -
1691480703.8714583-CDS-H-paniculata_contig1298:25012..251171691480703.8714583-CDS-H-paniculata_contig1298:25012..25117Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1298 25013..25117 -
1622929024.7180078-CDS-H-paniculata_contig1298:25595..258101622929024.7180078-CDS-H-paniculata_contig1298:25595..25810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1298 25596..25810 -
1691480703.8822234-CDS-H-paniculata_contig1298:25595..258101691480703.8822234-CDS-H-paniculata_contig1298:25595..25810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1298 25596..25810 -
1622929024.7311778-CDS-H-paniculata_contig1298:26634..267521622929024.7311778-CDS-H-paniculata_contig1298:26634..26752Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1298 26635..26752 -
1691480703.8926601-CDS-H-paniculata_contig1298:26634..267521691480703.8926601-CDS-H-paniculata_contig1298:26634..26752Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1298 26635..26752 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1298.1873.1

>prot_H-paniculata_contig1298.1873.1 ID=prot_H-paniculata_contig1298.1873.1|Name=mRNA_H-paniculata_contig1298.1873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MEVKGLSWPFEDQLDAEGFKSYFLGNAAAFVVRAFPDQKDDGGKKCVQDI
KSEVWGTFHIKTNFPGRCSHFCNGGFITDPRRRRRGVGKFMGFAFLKLAK
DLGYKASYFNLVFRTNEASLRLWRTLGFTELAVVPKAASLKGIEGLVDAI
QFYYDLESLEEEDLPEHLRS*
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mRNA from alignment at H-paniculata_contig1298:23118..27558-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1298.1873.1 ID=mRNA_H-paniculata_contig1298.1873.1|Name=mRNA_H-paniculata_contig1298.1873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4441bp|location=Sequence derived from alignment at H-paniculata_contig1298:23118..27558- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCGAGTGGTGCATACAGAGGGTGTACCCTCTGGGGTGGAAAGGCCTCGT
ACGTGCATATATATTCACGGCCGCGTGCGTGTTGCTCCGCTGTCGTTGGA
CCCCTTTTTCGACGACTGCCCCGAAAGGACAGCATCAACACCAGAATTCA
GTCCATCAGGCTATGTACAACGGGCTTCTCCGCATGCGAGTGATGTAATC
ATGTTAAGAAACAGGCGACCTCACTGTACCTTACATTCTAGGATTTTTTA
TTTTTTAAATGGGTCATTTATGCCGAGTAACGACAAAAATATGTGCAATT
TTGTTCGGAATCGGTGCGAAGAGTCCTGTATTGTAAGTTTAGCACCCCAA
TTCTCTTTTCATGCGAAAAATGCACGAAGCAAGTGAGGCGAGATACGTGC
GTTTCTTTTTTCAACGCGCAAGGGAGAGGCCTAACCGGCTAGAGGTGTTC
ATCATACGCTTATTGCCTGGAAAGCCTCTCCCAACTGAGGAAACCAAATC
GGATGAATGAGGCTAACGACCAAGCTGTCGATCCATGATCCACAAAAAGC
ACAGGATATTTATTATCTTTGGGATCCTTTCGCCATGCATACCACCAGAC
CCTCCAATTTAATGGAAATTTTCTGGGCATGGTGATGTCGTTGAGAGGAT
TTCGGAAACGTTGTTTTCGTGTTTACAACTCACTCCCTCTTGCGAAGGAT
GATGACCGATCATAACCGTAGCAACTTTTTATTTCAGTTTTTTTATGGAT
GGTATCACTATTAGCTGTGCTGTATATATGTACTGTGCTTTTCTGTCGCT
GTCTCAATGGAAGTAAAGGGACTCAGCTGGCCGTTTGAGGATCAACTGGA
CGCGGAAGGGTTCAAGTCGTACTTTTTGGGCAACGCGGCAGCCTTCGTTG
TACGTGCCTTTCCCGACCAGAAAGGTGAATACAGCAAATAGGGGACAAGC
AGGCCCGGCGAGTAGACAGTACACAGTGATGAACCCAACCCGAAAGCAGC
TTTCTCCTTATCAGGGTTTGGAGCACCGTTGGCGCTGCTTGACAAGCACC
GGACGAGTAAGTGCGTACTACCGTAATCGACTGCGGGCTTGATGAAAAGT
ACTACGTGGAACGAGCGATCTACTTGCTTTCATGAACAATGACCAGTACA
ATTTTCTCGGTTTGGACCGATCAACACCGGTACGGGTCGACTCATACCTC
AAACGAATCAGTCGTGAACAGACGTGTGCTAACCATCCGTAACGTGCGAA
TCAGAGATAGACAAACAGGTGCTAACGGTTGGTGGTGGTACCGATCACTC
GTGACCACCATGACCACCATGCACAGATCGTACCACTCCTACCGATTGGC
AGTGACAACCATGTACGAATCGTATCGCCCCTACCAACTGTTTTGGACAA
TCGTGTACTTGAGATCGGTAGGGGTACCGATCAGCCATGAAAACCATGTA
CAGATAGTATCGGTCGTACCGATTGTTTTGCACAAATATGTACCGATCAA
AGCTGGTGTACCGACTTTACGATCTATCCCTTCGTCCATCGGTGAAAATG
AATGAGAGATGTGAACGCTGTGATTTAACCGTGCAATTGTTGTCGCCTAC
TTCAGAAAGAAGGTAGTACCCTTGCAGTAAAAGGGGAAACCCCCCCCTCA
CCGTTTAGGGGGGTACCCCCTACCGTACGAAGAGAGAGACAAGTCAACCC
CCTTTCTTTTTGATTTCTTATTCAACCACAACGAAACGGAAAGGCCAGAC
GACGGAGGAAAAAAGTGTGTTCAAGATATTAAGTCGGAGGTGTGGGGTAC
GTTTCACATCAAGACCAACTTCCCGGGGCGATGCTCGCATTTTTGTAACG
GGGGGTTCATCACGGACCCTCGACGTCGGAGGCGCGGAGTGGGAAAGTTC
ATGGGCTTCGCGTTTTTGAAGCTCGCAAAGGACCTCGGGTACAAAGCCAG
CTATTTTAATTTGGTGAGTTCGCAGGTGACCTCAGCACGGATCATTTGGC
AATAGAAGGAATGAAGGGCATGTTTGTTCGCCTCTTCTTTCCCCCACCCC
GCTGCTTGTCGTGTCTCTTGTTTCCGTGGATTTATAACTCAAAGATGTCG
GTTTCGAGTGCGTTTGTTTGTTGGACACGACTGTTTCTTCGTGTCAACAT
CCCATTTGATCGGTAGTTGCAATGTTTTTTCGCGCAATCTGGCTATGATG
TCACCGCCGTTTAGTGCCCTGCACCCCGCGTACAATTTGATTATTTGGGG
ATAAATAACAGAAAGACCTTGCTGTCCACGTCTGGTATCGTACAATAAAC
ACTCATGAACATGTGCGATGTTTCCAGCACGGCCTTGCTGAGTCAATTCG
TTGATATGTGTCCGCTGGGAATGCCTGTGCCGCTAAGATAGCTTGTCGCT
TCAAATGCACCCGTCTTGCGTTGTGTTACCATCCTGGTCAGGTGTTTCGG
ACAAACGAGGCGTCTCTTCGGCTCTGGCGTACCTTAGGCTTCACCGAGCT
AGCGGTGGTACCTAAGGCTGCTAGTCTCAAAGGCATCGAGGGATTGGTGA
GTATTTGATAAAAAAAATCTAGCGCTGAAGTTGACATATGATGTATTGAA
AGCTGTTGAGTACAAGTTACCCTGCAAGTATTGTCATGATCTAAAAGCGG
TTTTGTAGGTTATGAAATCCGTATTTGGTATTCGACATTCAGTTATTTTA
TCGCTACCCTCGTCGCGGCGGCACGCCCTGTCTTAAGGCAAGCGGGAGAG
ATTCTGATACAGAGCAAATTGAGTTGACCTCCAAGTAAGTGCCCAATTGA
GCAGACAGTATCGTCGAATATTCCTGTCAAGTGTCTTGATAAATTATATT
TTTTATCGAGAAATGCGTTTTTTTCGAGGGGTGTCTACCGGATGTTCAAA
ACGATATATCGGCTATGTATCCCTGTGAGAGAAGTGAGCCACCCGCGCGA
AGCGACAGGCGAGCGCTTTCAAGCGAGCCAAAATAGCTGGCTCGTGAGGA
GGGGCTCGCTGGAGGAGTTTGATAATGAACAGAGCAGTGTATAGTCACTG
AGTAAGTTAAATAGCTGACATTTCATCAAATTGACCTCTGATCGATTTAA
ATCTTACCCCATCACCCCATAAACGATACATCATTCATGTATCGGCGCCG
ATACACAACCCCATTTTTTTCGCTTACAACTGCGGTCAAATCACTCCGTG
GGTTTTGATAGTTGTGTTGTCATGGTAGCTTTACGATGCAGCTCATATGC
AACCGAAATATCGAGTCATTGTGCTCAGCCCTCGCGATCACAGAGGTAGC
TTGTGTTTTTGCGGTAACACAAACAGCAATGCCTGCTATCTTTTGTTCCT
TGAAGTCGTTGCCTGTCATTTTCTGGTGGATGGGAGGGAGCGCCTGTTTT
TATCCTCGATCATAGTTGTGCGAACAGCTGGGATTTTAGGGGATCATGGA
GGAATCGTGCGCTAACGAGTACTAATATCTCAAAAATCCCCCCCAGGCTA
TTGCACATTTTATGGCGTGAACGTGTACCAAATTCGTTCCTTTCGACGGT
GCAGCACGCACCGTATCTGTTTCGACTTGAGGCAGTCACGCTCATATTTA
CTAGCAAAATCGCTGTGCTGTGGTGCCAACGGACATGTATATTTCAGTCA
GGTGAACCTCTCATTGTTGAATGAAATGCATACACTGGCAGAAAGATCAA
TGTACAGGCAGGTACGTGTTCATGCATGTTGAATAAAACTTTGTCTCTGT
TCTATATTGCCCCGCACAGGTGGACGCAATCCAATTCTACTACGACCTGG
AGAGTTTGGAGGAAGAAGACTTGCCGGAACACTTGCGCTCCTGAAGCGTG
TATATTGATTTCTTGCAGTTAGTTGCATGAGTACATTTTCTATATGTACA
TGTACACGAAACAAAATGCGTGAAAATACGTATTACAAGAGGCGACCAAA
AGCTATTTTCCTCTTATCTCACAGTATTATTATTACTCTTGAGTGCAGCG
TAGCCAGCTATCTCCGGAGTGTTGTTTTTGTCTTTGAGGTCATCCACTAA
ATGTTCGTTTGAACATTTTACACCATTACCACCTTCCCATCACGTGCAGA
CTCCGATATGGTGTCGTGGAAGCAGCGAGCAAATATGGAATCAGCACGTT
GCCATCAATGCGACGGAGATGTGTTCAAAGGTATTAATTTCCGACTGCTA
TCTGGCGTTTTTGCACCACCGCTGCGAATGTGCGCGTCGATAGGCTATGC
AGGGTCTCCACTCGGTCATGGAGTACAGGTAGGGTATCTCCGCGACGATT
TGAGCGCGCGCGCGGGCGCGCGTGTGTGTAGCAGGGTGGCAAGATCCGAA
AAGCGGAAAATGGGAAATGGAAACAACAACGCAAAAGAACATGCGGAAAG
AAAAGCATGCTCTTGCTCCCAAAATGTGAAACAGTGAGGTC
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Coding sequence (CDS) from alignment at H-paniculata_contig1298:23118..27558-

>mRNA_H-paniculata_contig1298.1873.1 ID=mRNA_H-paniculata_contig1298.1873.1|Name=mRNA_H-paniculata_contig1298.1873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at H-paniculata_contig1298:23118..27558- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGTAAAGGGACTCAGCTGGCCGTTTGAGGATCAACTGGACGCGGA
AGGGTTCAAGTCGTACTTTTTGGGCAACGCGGCAGCCTTCGTTGTACGTG
CCTTTCCCGACCAGAAAGATGGAAGTAAAGGGACTCAGCTGGCCGTTTGA
GGATCAACTGGACGCGGAAGGGTTCAAGTCGTACTTTTTGGGCAACGCGG
CAGCCTTCGTTGTACGTGCCTTTCCCGACCAGAAAGACGACGGAGGAAAA
AAGTGTGTTCAAGATATTAAGTCGGAGGTGTGGGGTACGTTTCACATCAA
GACCAACTTCCCGGGGCGATGCTCGCATTTTTGTAACGGGGGGTTCATCA
CGGACCCTCGACGTCGGAGGCGCGGAGTGGGAAAGTTCATGGGCTTCGCG
TTTTTGAAGCTCGCAAAGGACCTCGGGTACAAAGCCAGCTATTTTAATTT
GACGACGGAGGAAAAAAGTGTGTTCAAGATATTAAGTCGGAGGTGTGGGG
TACGTTTCACATCAAGACCAACTTCCCGGGGCGATGCTCGCATTTTTGTA
ACGGGGGGTTCATCACGGACCCTCGACGTCGGAGGCGCGGAGTGGGAAAG
TTCATGGGCTTCGCGTTTTTGAAGCTCGCAAAGGACCTCGGGTACAAAGC
CAGCTATTTTAATTTGGTGTTTCGGACAAACGAGGCGTCTCTTCGGCTCT
GGCGTACCTTAGGCTTCACCGAGCTAGCGGTGGTACCTAAGGCTGCTAGT
CTCAAAGGCATCGAGGGATTGGTGTTTCGGACAAACGAGGCGTCTCTTCG
GCTCTGGCGTACCTTAGGCTTCACCGAGCTAGCGGTGGTACCTAAGGCTG
CTAGTCTCAAAGGCATCGAGGGATTGGTGGACGCAATCCAATTCTACTAC
GACCTGGAGAGTTTGGAGGAAGAAGACTTGCCGGAACACTTGCGCTCCTG
AGTGGACGCAATCCAATTCTACTACGACCTGGAGAGTTTGGAGGAAGAAG
ACTTGCCGGAACACTTGCGCTCCTGA
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