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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1721 |
| Cds size | 1107 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12950.1844.1 >prot_H-paniculata_contig12950.1844.1 ID=prot_H-paniculata_contig12950.1844.1|Name=mRNA_H-paniculata_contig12950.1844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp
MHNPDTYCSPRLLYCGLPAGSTLQYHPPAWATLPSPRRSNRRSNRKARLT
HRDLLRIVTCRKGDLNGDGNLTLTQGIEVDCACIDASYTSCFENGAGVYV
DSALIYVGQSIGGCYRETTFGTGGDRIFTPTGTWEPVIGYIYISQSFITA
PAYSGYGWSFTLVEEYDAGTGMTRERLLCYVLMEGAEEPTDPILAGRWQC
DDPNNLETGMHLLKNSDFHAVECGCPTGDGSEAVVPRATPTNISPPTGSS
VMKTPIATGPEEAPTWPPFMFSPPGMEASGSTNNVDAEDNDSGDADVTVG
IIVGIAIGATIIVLGVGTMLMAEWRRKQEADSSATGPTQDMAERRNLQVI
RHSMERQEPFRGMPGGRA* back to topmRNA from alignment at H-paniculata_contig12950:1105..5679- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12950.1844.1 ID=mRNA_H-paniculata_contig12950.1844.1|Name=mRNA_H-paniculata_contig12950.1844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4575bp|location=Sequence derived from alignment at H-paniculata_contig12950:1105..5679- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TAAACGTATTCATGGCATGTGCAGGCAGATTTTTGCCATTTTCATATGTG
AACAATATACAGTCAGAAGGAGCGTTTGATAAGCCTAGAGCACGAAGACT
CTGCCGAAATAGTTTGGGTTGATTGATCGTCTTGGTTGTGACAGTACGTT
GATTCAATGGTGTCAGACAGCCAAGCAGTAGTCGACCGTGCATCAGCTTG
GGTTCGATTCAACAATACATATTTTGTGGGGATGCATGCATAATCCAGAT
ACTTACTGTTCGCCGCGACTACTCTACTGCGGTCTGCCTGCGGGATCTAC
GCTACAGTATCATCCTCCTGCGTGGGCAACGCTTCCCAGCCCTCGCCGTT
CCAATCGACGCTCAAACCGAAAGGCAAGACTCACACACCGGGATTTGCTT
CGAATCGTCACTTGCCGTAAAGGTGACCTGAACGGGGACGGCAATCTGAC
CCTGACACAGGGTATCGAGGTCGACTGCGCATGTATAGACGCTTCCTACA
CGTCGTGTTTCGAAAATGTGAGCTTTGTAAAGCATGACAGAATAATTATA
GGGTAGGTAGGTATAAGGATAAAACACGTGAATGCTCACGACCCTCCCCT
ATTCTCCCAACCTCGTCGTAAAACCGAGATATCGATAGCTAGGTCGTATG
GATTGCTTCGTAAATGGATGCTTTACAAAGGCCCAGCCGTACTCCCACGG
CAGCCTGAAGGCGTCCTTGACGCGTAGCGCAAACAGCTGATCTACTCTAG
ACAACTGAACAAAGTCGTGCGGCCTTGTAGTTGATACGGTACTGTATTTT
ATGTTGTTCTCCAGCCTGCACAACATTTCTCCATCATAACCCTACATGTC
ACATGAGCCAAAACTGGCAGTACCCGGAATGAGTGTAATTAATAGATCGG
TGGCCTTTATTCGTGTGTATGCTTTTGTCTCTCTTTTTCCCTCACTTCTT
TTCGTCCGTCTGTTTGGTGGCCATCATGCGGTGGACATTTTTTGCGCCAC
AGAGATATTCGAATAATTCTCGCCACTACTATAGAGTATCAAAATCATGC
TAGCCTCTCACATGGCTATTGTTGCGTATGCACTGTGATTCGTCCGGAGT
TTCTATCTACTGTTGGCAGCCGTTGCGCGACTTGGAACGGAACACATGCA
GTGATTGCCGTAGGCACAGCGAACTTGTGGTAGCCTGTTCAAGCGTAATT
CGACGATTCTAGTATTCCCCATTCCCCAACTCTTGGTGGCTTGGTTGTGG
CATCGTTCAGACCAGGGGCTGCCCAGCGGGTACGTTTGTATGTTAACGAG
ACCTGAGAAGGAGGTCGAGATATGTTGTATTGTATGTTTCGCACATTCGC
ATATGCAAGCACGAATCTACTGGAGATGATGCCCAAGCTTTGATAAAAAG
GCATGGTCAATAGTTCACCTAGAACTTGTGTTGGTCAATCCTTGCTCCAA
TGGCCTTCTGCGACCCGTGATAGCACTCTGGGATCTATTTCTGCTAAGTT
CTACATGACAACTTTCAAGACTCTTATCATATTTTGTGAACCGGGATTGA
GTTACATTGTTCCACTCTTCGAAAAATTGTAAGCTACTGCACCCCCCCCC
CTTGCGTACCGTGTTACTTCAGTAACCCTCTTCACCCTGTCCCTTCCCCA
CCGACCACAGGGAGCTGGTGTCTACGTAGATTCTGCCCTAATCTACGTAG
GCCAATCCATCGGAGGCTGCTACCGAGAGACCACATTTGGGACAGGGGGC
GACCGTATCTTCACCCCAACGGGAACTTGGGAACCAGTAATCGGGTACAT
ATACATTTCCCAGTCATTTATCACGGTGAGCCCGGGTTGAGTAAATGTTT
CAAATTTCAAACATGGGATGTGACAGAGATGAGCCTGCCAGTTTACTCTC
AGTGAGAGGGATTTAGACCAACGTTTTTTGCTCCACCTCAGGTTGGGACT
ATGGTGTCATTATACCGGGCTAGATCAAATGATTTTGTCGCCCAGTGTGT
TTCCAGCCTCCCAACCCCTTTCCCTCAGCGACGTACCCATCGTTGCTACC
GTCGTCTCGATGTACCCCATCGCATAATGGTCAGGCACCGGCGTATTCTG
GGTATGGCTGGTCCTTCACACTCGTCGAAGAATACGATGCCGGTACAGGA
ATGACCCGAGAAAGGCTGTTGTGCTATGTTCTGATGGAGGGAGCTGAAGA
GCCCACCGACCCCATCCTCGCGGGAAGGTGGCAATGTGAGTTTCCCCCGG
GATATTCGTGGCGCCGAATGTTCGTATGTTAATCAAACAAACAAAATCCA
ATATTTGGGAACATCGGACAGACGAACGCCACACGTGCCATGATATGATT
ACAAGCTGAGGCCATCAGTAACAGTAAACATATACTCTTCTATTGCAAAA
ACCTAGGCCATTACTTATATCCTCTGATGCAGGTCGAGAAATGGACCTCT
AAACATGCATAATGTCTGTTTTTGGGATGTCCATTTTGCCAAAATCGGCC
AAAATCAGCAAAAGCAAGTCACATGGTGGTGTGTCGGCAATAAGTTCGCA
ACGAGACGTCCGACGAAGAAACCGTTTCTTCATCGGGCATTGTGTTGGCG
TGGTATGGCGATGTAACCAACATCCAAATCCCCTTGTGTGTCATTAATGT
TTGAGCATTGTTTTGCATGTCAAAATTGGGATCAAGGCTTACTCCAAGAG
GCGGTTGGTAGTTTAATCTTGAGGAGGATGATGAAAGAGGATGGAGAACT
AGATTTTAACGGAGAATACAACCCAAAAATCGTTCCGTCATCGGTGGTCT
CGTTGCGACGTTATTGTGGAAACACCATCATGTGACATGAGTGTGCCGAT
TCTAGCAGATTTTCGACAAAGAGGACATCCGAAAAACAGACAAGTGTATG
TTTAGAGGACTATTCCTCGATCATTTTGTATTGAAAACGTAGTCTGAGGG
CATGTACGTGCAAGCTGATATTGTGGGCTGTCTGTCCAATGATGTGCTTG
GTTTCCAGGAGTACTTCATACATGAAAAATTATGAGATTTTTCCCCTGAT
CGCCTAGACTCATGAAATAGAGGAGTACGTGTGGTATCTGGATGGGTATA
TCATGCCATCGTTGTTATTTGTCGCTAAGGACGTTTTATTGGTGAGGAAG
GATTAGGGGGGAAGAAATATAGCTCCTCTGTTGATTGACTTCGACACGGC
GGTTCTCCCAACTGGATTCTGTTCTGCATATTCCGAACAGGCGACGATCC
GAATAATCTAGAGACGGGTATGCATTTACTCAAGAACTCTGATTTTCACG
CCGTCGAATGCGGCTGCCCCACCGGCGACGGCAGTGAAGCCGTCGTGCCG
CGAGCTACACCGACAAATATCTCGCCGCCCACTGGCAGTAGCGTCATGAA
AACACCGATAGCCACCGGACCAGAAGAGGCGCCAACATGGCCTCCATTTA
TGTTTAGTCCTCCGGGGATGGAAGCTTCAGGCTCGACCAACAATGTGGAT
GCGGAGGATAATGACTCGGGAGACGCAGACGTCACAGTGGGTATCATTGT
GGGAATCGCCATTGGGGCGACCATTATTGTGCTTGGTGTAGGGACCATGT
TGATGGCGGAATGGAGGAGGAAACAGGAAGCGGACAGTTCCGCTACAGGA
CCAAGTGAGTGCGTTACGTTCTTATATGAGGAGCGTAAGAATAATTTGAC
GTCATCTTCTTCTCCGATTACCAGGCGAAATTGTTTCCCTGGTTCCATTT
TTTTGTAAAATGCGTCGTAAACACGACTACTGTCTTCGACGTTTCTCAAG
ATATGGCGCTGTGCCGAAGTATATCTATTTAGTGGAGACCGAACGCGTCG
AAGTCATGCGACAGGAAGCTAGTGCCTAGGATACCCACCAGACCCGCGTT
GCCTGAGCACAACATATCCAAACCCATGCAACAGGTGGGCGCTATATGAC
GTCATTTTTAGTGTTACTTCTGCTGGTCCATCAATTTCACGTTGCGTGTG
ACGACTACTGCTGCTTTTCCCTCCTCCTTTGTTGGAAAGGCAGCGACGCA
TCTAATCTTGCTCACTCATATCTTCTTCCCTGTGCGTCTTGTTGAGAACA
GCGCAAGACATGGCGGAGCGACGAAACCTTCAGGTTATACGACATTCAAT
GGAAAGGCAGGAGCCGTTCCGAGGCATGCCGGGCGGACGAGCATAGCAAT
GTGACCATGTCCACCCGTCCCGAAGCAGACGAAGCCTTTTAAGTCATCAA
CTATTAGTCGGTCACCGGTTGTCGCATTCCGTGTATTTATTTGCGTACAG
ACTTTCCGACGGTAGGTGACGCCAGTACTCAGACAGTGCATTTACTTGGT
ACGGGGGTAATCTATTCATACAATAGTTTTCAAAGGCGGTATTTTTAACC
CATTAAAAACGTGCCTATTAGTAGGCAAAGAGTGTGTATATTTTTTATCA
TCTGTAGCTTAAGGCGGCGCCTTCTAAGAATGCAAGTGCTTGCAAAAAAG
TAAAGTTTATGGTGTCCTATTCACTACCCAAAGTCGTCCCGCATGGCCCA
CTCGCTGCCTCGTTGCCATATCAAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig12950:1105..5679- >mRNA_H-paniculata_contig12950.1844.1 ID=mRNA_H-paniculata_contig12950.1844.1|Name=mRNA_H-paniculata_contig12950.1844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2214bp|location=Sequence derived from alignment at H-paniculata_contig12950:1105..5679- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATAATCCAGATACTTACTGTTCGCCGCGACTACTCTACTGCGGTCT
GCCTGCGGGATCTACGCTACAGTATCATCCTCCTGCGTGGGCAACGCTTC
CCAGCCCTCGCCGTTCCAATCGACGCTCAAACCGAAAGGCAAGACTCACA
CACCGGGATTTGCTTCGAATCGTCACTTGCCGTAAAGGTGACCTGAACGG
GGACGGCAATCTGACCCTGACACAGGGTATCGAGGTCGACTGCGCATGTA
TAGACGCTTCCTACACGTCGTGTTTCGAAAATATGCATAATCCAGATACT
TACTGTTCGCCGCGACTACTCTACTGCGGTCTGCCTGCGGGATCTACGCT
ACAGTATCATCCTCCTGCGTGGGCAACGCTTCCCAGCCCTCGCCGTTCCA
ATCGACGCTCAAACCGAAAGGCAAGACTCACACACCGGGATTTGCTTCGA
ATCGTCACTTGCCGTAAAGGTGACCTGAACGGGGACGGCAATCTGACCCT
GACACAGGGTATCGAGGTCGACTGCGCATGTATAGACGCTTCCTACACGT
CGTGTTTCGAAAATGGAGCTGGTGTCTACGTAGATTCTGCCCTAATCTAC
GTAGGCCAATCCATCGGAGGCTGCTACCGAGAGACCACATTTGGGACAGG
GGGCGACCGTATCTTCACCCCAACGGGAACTTGGGAACCAGTAATCGGGT
ACATATACATTTCCCAGTCATTTATCACGGGAGCTGGTGTCTACGTAGAT
TCTGCCCTAATCTACGTAGGCCAATCCATCGGAGGCTGCTACCGAGAGAC
CACATTTGGGACAGGGGGCGACCGTATCTTCACCCCAACGGGAACTTGGG
AACCAGTAATCGGGTACATATACATTTCCCAGTCATTTATCACGGCACCG
GCGTATTCTGGGTATGGCTGGTCCTTCACACTCGTCGAAGAATACGATGC
CGGTACAGGAATGACCCGAGAAAGGCTGTTGTGCTATGTTCTGATGGAGG
GAGCTGAAGAGCCCACCGACCCCATCCTCGCGGGAAGGTGGCAATGCACC
GGCGTATTCTGGGTATGGCTGGTCCTTCACACTCGTCGAAGAATACGATG
CCGGTACAGGAATGACCCGAGAAAGGCTGTTGTGCTATGTTCTGATGGAG
GGAGCTGAAGAGCCCACCGACCCCATCCTCGCGGGAAGGTGGCAATGCGA
CGATCCGAATAATCTAGAGACGGGTATGCATTTACTCAAGAACTCTGATT
TTCACGCCGTCGAATGCGGCTGCCCCACCGGCGACGGCAGTGAAGCCGTC
GTGCCGCGAGCTACACCGACAAATATCTCGCCGCCCACTGGCAGTAGCGT
CATGAAAACACCGATAGCCACCGGACCAGAAGAGGCGCCAACATGGCCTC
CATTTATGTTTAGTCCTCCGGGGATGGAAGCTTCAGGCTCGACCAACAAT
GTGGATGCGGAGGATAATGACTCGGGAGACGCAGACGTCACAGTGGGTAT
CATTGTGGGAATCGCCATTGGGGCGACCATTATTGTGCTTGGTGTAGGGA
CCATGTTGATGGCGGAATGGAGGAGGAAACAGGAAGCGGACAGTTCCGCT
ACAGGACCAAGCGACGATCCGAATAATCTAGAGACGGGTATGCATTTACT
CAAGAACTCTGATTTTCACGCCGTCGAATGCGGCTGCCCCACCGGCGACG
GCAGTGAAGCCGTCGTGCCGCGAGCTACACCGACAAATATCTCGCCGCCC
ACTGGCAGTAGCGTCATGAAAACACCGATAGCCACCGGACCAGAAGAGGC
GCCAACATGGCCTCCATTTATGTTTAGTCCTCCGGGGATGGAAGCTTCAG
GCTCGACCAACAATGTGGATGCGGAGGATAATGACTCGGGAGACGCAGAC
GTCACAGTGGGTATCATTGTGGGAATCGCCATTGGGGCGACCATTATTGT
GCTTGGTGTAGGGACCATGTTGATGGCGGAATGGAGGAGGAAACAGGAAG
CGGACAGTTCCGCTACAGGACCAACGCAAGACATGGCGGAGCGACGAAAC
CTTCAGGTTATACGACATTCAATGGAAAGGCAGGAGCCGTTCCGAGGCAT
GCCGGGCGGACGAGCATAGCGCAAGACATGGCGGAGCGACGAAACCTTCA
GGTTATACGACATTCAATGGAAAGGCAGGAGCCGTTCCGAGGCATGCCGG
GCGGACGAGCATAG back to top
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