mRNA_H-paniculata_contig12947.1842.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12947.1842.1
Unique NamemRNA_H-paniculata_contig12947.1842.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: D7FRN4_ECTSI (Putative hydrolase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN4_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 2.380e-110
Identity = 166/242 (68.60%), Postives = 195/242 (80.58%), Query Frame = 1
Query:   97 MILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFESGTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVPDFWCVGTPVQLHTFLDAVRTGKVLPRHKARFCFDLDRTLLSVSSRRGED 822
            M+ WLLDNLK +PEDTLW+G+Q+ L  ++A+ ARLR+EY SLD+R+V +DFQTRGAAETLFIMLQHM+S E++RK+ISLDCDTIYFSD+LG FR  A  CG SFYFED   KPIFSYI FE  T  IV IREK AISR+ANTGAYAFPCG+++R AC EVLDNPVGKAGEFYTS+II+ MI  G+KFVGIHVPDF+CVGTP QL +FL  V+ G V+PR K R  FDLDR+L    S  G D
Sbjct:    1 MLFWLLDNLKLKPEDTLWVGVQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSSAEIRRKSISLDCDTIYFSDVLGSFRACASGCGSSFYFEDEGDKPIFSYIEFEPSTDKIVYIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGKAGEFYTSSIIERMIQAGQKFVGIHVPDFFCVGTPAQLRSFLGLVQKGGVVPRRKTRVFFDLDRSLRMARSATGAD 242          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A818V4J0_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A818V4J0_9BILA)

HSP 1 Score: 270 bits (689), Expect = 8.300e-87
Identity = 138/281 (49.11%), Postives = 184/281 (65.48%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFES-----GTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVP--DFWCVGTPVQLHTFLDAVRTGK-VLPRHKARFCFDLDRTLLSVSSRRGE 819
            MN++IPMGG G RFS E Y  PKP+INIVGRPM+ WLLDNL  + +D +++G+  SL   F +   ++ EY +     V +DF+TRGA ETLFIMLQ +  + L  KTISLDCDTIYF  IL  FR    E   SF+FED   KP+FSY+  +      G  ++ D+REK+ IS +ANTGAYAF     +++ C ++LD  VG +GE+YT+ IIK M+ + ++FVGI V   DF CVG PVQL  FL  ++T +   P  K RFCFDLD TL+S  ++ G+
Sbjct:    1 MNILIPMGGIGHRFSKENYRFPKPLINIVGRPMLFWLLDNLDTKEDDIIYLGLLESLEKQFNLVQTIKMEYPNRKFESVVIDFETRGAVETLFIMLQFLNPDRLDCKTISLDCDTIYFQPILEKFRRLPSEINASFFFEDNGGKPVFSYLKLDENLTDEGYHSVTDVREKIMISTHANTGAYAFRSARILKQYCIQLLDEAVGSSGEYYTTNIIKLMLEDQERFVGIEVNINDFVCVGIPVQLIDFLKKLKTDQHSYPVRKMRFCFDLDNTLVSYPTKYGD 281          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A0D2WPY4_CAPO3 (NTP_transferase domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WPY4_CAPO3)

HSP 1 Score: 275 bits (702), Expect = 3.100e-84
Identity = 134/267 (50.19%), Postives = 182/267 (68.16%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKF-QPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFESGTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVPDFWCVGTPVQLHTFLDAVRTGKVLPRHKARFCFDLDRTLLS 798
            MN++IPMGG GSRF  + Y  PKP+INIVG PM+ WLLDNL   +  D +W+ +  S+   F  + R+ ++Y    + +V LDF+TRG AET+F++LQHM  ++L+R+TI LDCDTIYFSD+L DFR   P    SF FED   +P+FSYI  +   +NI+DI+EK+ IS +ANTGAY F  GE +++ C E LD  V   GE+YTS II+ M+ + + F G++V DF+CVG+P QL  FL  +R GK+      RFCFDLD TLL+
Sbjct:    1 MNIIIPMGGIGSRFERDNYRFPKPLINIVGHPMLYWLLDNLSIDRSNDVIWMAVMTSVENIFHFKKRVCKQYPKHRINVVTLDFETRGPAETVFVVLQHMKPDDLKRRTICLDCDTIYFSDVLADFRRLDPGVNASFCFEDKIGQPVFSYIAMDD-QQNILDIKEKMPISTWANTGAYGFASGELLKQFCVEQLDTSVDSTGEYYTSAIIRLMLSQKQPFKGVNVSDFYCVGSPDQLTDFLHNIRIGKIKSPRTMRFCFDLDNTLLT 266          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A819T6J3_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A819T6J3_9BILA)

HSP 1 Score: 270 bits (689), Expect = 3.840e-82
Identity = 138/281 (49.11%), Postives = 184/281 (65.48%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFES-----GTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVP--DFWCVGTPVQLHTFLDAVRTGK-VLPRHKARFCFDLDRTLLSVSSRRGE 819
            MN++IPMGG G RFS E Y  PKP+INIVGRPM+ WLLDNL  + +D +++G+  SL   F +   ++ EY +     V +DF+TRGA ETLFIMLQ +  + L  KTISLDCDTIYF  IL  FR    E   SF+FED   KP+FSY+  +      G  ++ D+REK+ IS +ANTGAYAF     +++ C ++LD  VG +GE+YT+ IIK M+ + ++FVGI V   DF CVG PVQL  FL  ++T +   P  K RFCFDLD TL+S  ++ G+
Sbjct:    1 MNILIPMGGIGHRFSKENYRFPKPLINIVGRPMLFWLLDNLDTKEDDIIYLGLLESLEKQFNLVQTIKMEYPNRKFESVVIDFETRGAVETLFIMLQFLNPDRLDCKTISLDCDTIYFQPILEKFRRLPSEINASFFFEDNGGKPVFSYLKLDENLTDEGYHSVTDVREKIMISTHANTGAYAFRSARILKQYCIQLLDEAVGSSGEYYTTNIIKLMLEDQERFVGIEVNINDFVCVGIPVQLIDFLKKLKTDQHSYPVRKMRFCFDLDNTLVSYPTKYGD 281          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A815KCG1_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A815KCG1_9BILA)

HSP 1 Score: 265 bits (678), Expect = 2.290e-80
Identity = 135/276 (48.91%), Postives = 186/276 (67.39%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFESGTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVP--DFWCVGTPVQLHTFLDAVRTGK-VLPRHKARFCFDLDRTLLSVSSRRGE 819
            MN++IPMGG G RFS + Y  PKP+I IVGRP++ WLLDNL  + +D  +IG+ ++L   F +   L+ EY     + + +DF+TRGAAETLFI+LQ M+ + L+RKTISLDCDTIY   I+ DFR  +     SF+FED   KPI+SY+ F      I D+ EK+ IS YANTGAYAF     +++ C ++LD+ VG +GE+YT+ IIK M+++ + FVGI V   DF CVGTP QL+ FL+ ++T +  +   K RFCFDLD TL+S   + G+
Sbjct:   35 MNIIIPMGGIGHRFSQQNYRFPKPLIKIVGRPILFWLLDNLDTKDDDITYIGLMKNLEKQFGLTQILKTEYPKRIFQFILIDFETRGAAETLFIILQSMSKDHLERKTISLDCDTIYLKPIIDDFRQLSNNMNASFFFEDNGGKPIYSYLKFNENLF-ITDVCEKIMISTYANTGAYAFRSASILKQYCIQLLDDAVGYSGEYYTTNIIKLMLNKQEIFVGIKVSFDDFVCVGTPDQLNQFLNKLKTQQNSINIRKMRFCFDLDNTLVSYPIKHGD 309          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A7S3G4H6_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H6_9EUKA)

HSP 1 Score: 264 bits (674), Expect = 3.970e-80
Identity = 134/276 (48.55%), Postives = 184/276 (66.67%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQS-LDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSY-ICFESGTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVPDFWCVGTPVQLHTFLDAVRTGK-VLPRHKARFCFDLDRTLLSVSSRRGE 819
            MNV+IPMGG GSRF  +GY+VPKPM+ +VGRPMI WLLDNL  + +DT+W G+ + L  +   + ++    +  + ++ + L+F TRGAAETLF +L  M   EL RKTISLDCDT Y +D+LG FR  AP  G  F FED  + PI+SY +  ESG+   V I EK+ IS +ANTGAYAFP  + ++ +C +V+D+ VG  GE+YTS++++ ++ +G    G+HV DF C+GTP QL  FL  V  G  + PR   RFCFDLD TL++     G+
Sbjct:   14 MNVIIPMGGLGSRFRKKGYNVPKPMVRVVGRPMIFWLLDNLSLEGQDTVWFGLSKELRDEHVFKQQVSNLLKGKVGVKFIDLEFDTRGAAETLFAILSQMDERELSRKTISLDCDTFYVTDVLGKFRQVAPGEGAIFVFEDAGSAPIYSYTVLDESGSA--VRIAEKLKISNHANTGAYAFPSAKSLKDSCEKVIDSSVGNVGEYYTSSVVQQLLKDGIIVRGVHVDDFHCLGTPEQLDAFLALVADGSFIAPRR--RFCFDLDNTLVTAPETPGD 285          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A815X3D1_ADIRI (Hypothetical protein n=4 Tax=Adineta ricciae TaxID=249248 RepID=A0A815X3D1_ADIRI)

HSP 1 Score: 263 bits (673), Expect = 7.880e-80
Identity = 138/282 (48.94%), Postives = 182/282 (64.54%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFESGTKN------IVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVP--DFWCVGTPVQLHTFLDAVRTGKV-LPRHKARFCFDLDRTLLSVSSRRGE 819
            MN++IPMGG G RF+ E Y  PKP+I IVGRPM+ WL+D L  + +D +++GI  +L   FA+   LR EY     + V LDF TRGAAETLFIMLQ +  + ++RKTISLDCDTIYF  IL  FR        SFYFED   KPIFSY+ FE    +      + D+ EK+ IS +ANTGAYAF     ++  C ++LD  VG++GE+YT+ IIK M+ + + FVG+ V   DF CVGTP QL TFL  +++    +   K RFCFDLD TL+S  ++ G+
Sbjct:    1 MNILIPMGGLGQRFTRENYRFPKPLIKIVGRPMLFWLIDYLDLKEDDIIYLGITEALEKQFALTQTLRVEYPKQTFKSVVLDFDTRGAAETLFIMLQSIDDDRVERKTISLDCDTIYFKPILERFRQLPAHLNASFYFEDHGGKPIFSYLKFEHEPSDPEHPPVVTDVAEKIMISTHANTGAYAFSSTSIMKEYCIQLLDEAVGESGEYYTTHIIKLMLTDKEPFVGLPVQTDDFVCVGTPDQLKTFLKRLKSKDTPVQVRKMRFCFDLDNTLVSYPTKYGD 282          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A818PD66_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818PD66_9BILA)

HSP 1 Score: 263 bits (672), Expect = 1.250e-79
Identity = 136/281 (48.40%), Postives = 182/281 (64.77%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFES-----GTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVP--DFWCVGTPVQLHTFLDAVRTGKV-LPRHKARFCFDLDRTLLSVSSRRGE 819
            MN++IPMGG G RFS E Y  PKP+I IVGRPM+ WLLD+L  + +D ++IGI  +L   F +   L+ EY     + +  DF+TRGAAETLFIMLQ M  + L+RKTISLDCDTIYF  I+ +FR        SF+FED   KPI+SY+  E      G   + D+ EK+ IS +ANTGAYAF     +++ C ++LD  VG +GE+YT+ +IK M+   + FVGI V   DF CVGTP QL+ FL  ++T +  +   + RFCFDLD TL+S  S+ G+
Sbjct:    1 MNILIPMGGIGHRFSKENYRFPKPLIKIVGRPMLFWLLDHLNTKEDDIIYIGIMVNLEKQFDLIQTLKMEYPKKTFQGIIFDFETRGAAETLFIMLQSMNEDRLKRKTISLDCDTIYFKPIIEEFRQLPDNLNASFFFEDNGGKPIYSYLKLEEKAPVEGYSFVTDVCEKIMISSHANTGAYAFRSATILKQFCIKILDEAVGHSGEYYTTNVIKLMLDSKELFVGIQVSTDDFVCVGTPDQLNQFLKELKTKESPITIRRMRFCFDLDNTLVSYPSKHGD 281          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A816EGU7_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A816EGU7_9BILA)

HSP 1 Score: 263 bits (671), Expect = 1.750e-79
Identity = 136/281 (48.40%), Postives = 183/281 (65.12%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFESGTKN-----IVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHVP--DFWCVGTPVQLHTFLDAVRTGKV-LPRHKARFCFDLDRTLLSVSSRRGE 819
            MN++IPMGG G RFS E Y  PKP+I IVGRPM+ WLLD+L  + +D ++IGI  +L   F +   L+ EY       + +DF+TRGAAETLFI+LQ M  + L+RKTISLDCDTIYF  I+ DFR        SF+FED   KPI+SY+  +          + D+ EK+ IS +ANTGAYAF     +++ C  +LD  VG +GE+YT++IIK M+  G++FVGIHV   +F CVGTP QL+ FL  ++T +  +P  + RFCFDLD TL+S     G+
Sbjct:    1 MNIVIPMGGIGHRFSKENYRFPKPLIKIVGRPMLFWLLDHLDTKEDDVIYIGILVNLEKQFDIIQTLKMEYPKKTFEGIIIDFETRGAAETLFIILQSMEPDRLRRKTISLDCDTIYFKPIIEDFRRLPGNLNASFFFEDNGGKPIYSYLKLDENINEQACFTVRDVCEKIMISNHANTGAYAFHSASILKQFCIRLLDEAVGHSGEYYTTSIIKLMMDHGERFVGIHVSLDEFTCVGTPDQLNHFLKRLKTKESSIPVPRIRFCFDLDNTLVSHPFEHGD 281          
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Match: A0A819I8J6_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A819I8J6_9BILA)

HSP 1 Score: 267 bits (683), Expect = 2.620e-79
Identity = 135/276 (48.91%), Postives = 186/276 (67.39%), Query Frame = 1
Query:    1 MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLWIGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMTSEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYICFESGTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKAGEFYTSTIIKGMIHEGKKFVGIHV--PDFWCVGTPVQLHTFLDAVRTGK-VLPRHKARFCFDLDRTLLSVSSRRGE 819
            MN++IPMGG G RFS + Y  PKP+I IVGRPM+ WLLDNL  + +D ++IG+  +L   F +   L+ EY     + + +DF+TRGAAETLFI+LQ M+ + L+RKTISLDCDTIY   I+ +FR  +     SF+FED   KPI+SY+ F      I D+ EKV IS +ANTGAYAF     +++ C ++LD+ VG +GE+YT+ IIK M++  + FVGI V   DF CVGTP QL+ FL+ ++T +  +   K RFCFDLD TL+S  ++ G+
Sbjct:  298 MNIIIPMGGIGHRFSQQNYRFPKPLIKIVGRPMLFWLLDNLDTEEDDIIYIGLMETLEKQFDLTQTLKTEYPKRTFQFILIDFETRGAAETLFIILQSMSKDRLERKTISLDCDTIYLKPIIDEFRQLSNNMNASFFFEDNGGKPIYSYLKFNENLF-ITDVCEKVMISTHANTGAYAFRSASILKQYCIQLLDDAVGHSGEYYTANIIKLMLNNQEIFVGIKVNFDDFVCVGTPDQLNQFLNKLKTQQNAINIRKMRFCFDLDNTLVSYPTKHGD 572          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12947.1842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRN4_ECTSI2.380e-11068.60Putative hydrolase (ISS) n=1 Tax=Ectocarpus silicu... [more]
A0A818V4J0_9BILA8.300e-8749.11Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
A0A0D2WPY4_CAPO33.100e-8450.19NTP_transferase domain-containing protein n=1 Tax=... [more]
A0A819T6J3_9BILA3.840e-8249.11Hypothetical protein n=6 Tax=Adineta steineri TaxI... [more]
A0A815KCG1_9BILA2.290e-8048.91Hypothetical protein n=6 Tax=Adineta steineri TaxI... [more]
A0A7S3G4H6_9EUKA3.970e-8048.55Hypothetical protein n=4 Tax=Palpitomonas bilix Ta... [more]
A0A815X3D1_ADIRI7.880e-8048.94Hypothetical protein n=4 Tax=Adineta ricciae TaxID... [more]
A0A818PD66_9BILA1.250e-7948.40Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 ... [more]
A0A816EGU7_9BILA1.750e-7948.40Hypothetical protein n=4 Tax=Rotaria TaxID=231623 ... [more]
A0A819I8J6_9BILA2.620e-7948.91Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12947contigH-paniculata_contig12947:465..3097 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.8
Seed ortholog evalue1.5e-91
Seed eggNOG ortholog2880.D7FRN4
Hectar predicted targeting categoryother localisation
EggNOG OGs28NC4@1,2QUXI@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size822
Cds size822
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12947.1842.1prot_H-paniculata_contig12947.1842.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12947 465..3097 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929020.5118861-CDS-H-paniculata_contig12947:464..6321622929020.5118861-CDS-H-paniculata_contig12947:464..632Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 465..632 -
1691480702.064292-CDS-H-paniculata_contig12947:464..6321691480702.064292-CDS-H-paniculata_contig12947:464..632Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 465..632 -
1622929020.7087917-CDS-H-paniculata_contig12947:942..11641622929020.7087917-CDS-H-paniculata_contig12947:942..1164Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 943..1164 -
1691480702.0760794-CDS-H-paniculata_contig12947:942..11641691480702.0760794-CDS-H-paniculata_contig12947:942..1164Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 943..1164 -
1622929020.7187154-CDS-H-paniculata_contig12947:1744..18851622929020.7187154-CDS-H-paniculata_contig12947:1744..1885Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 1745..1885 -
1691480702.0840597-CDS-H-paniculata_contig12947:1744..18851691480702.0840597-CDS-H-paniculata_contig12947:1744..1885Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 1745..1885 -
1622929020.7304344-CDS-H-paniculata_contig12947:2319..25721622929020.7304344-CDS-H-paniculata_contig12947:2319..2572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 2320..2572 -
1691480702.093545-CDS-H-paniculata_contig12947:2319..25721691480702.093545-CDS-H-paniculata_contig12947:2319..2572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 2320..2572 -
1622929020.7460396-CDS-H-paniculata_contig12947:3059..30971622929020.7460396-CDS-H-paniculata_contig12947:3059..3097Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 3060..3097 -
1691480702.1017406-CDS-H-paniculata_contig12947:3059..30971691480702.1017406-CDS-H-paniculata_contig12947:3059..3097Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12947 3060..3097 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12947.1842.1

>prot_H-paniculata_contig12947.1842.1 ID=prot_H-paniculata_contig12947.1842.1|Name=mRNA_H-paniculata_contig12947.1842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=274bp
MNVMIPMGGRGSRFSSEGYHVPKPMINIVGRPMILWLLDNLKFQPEDTLW
IGIQRSLSADFAVEARLRREYQSLDLRLVFLDFQTRGAAETLFIMLQHMT
SEELQRKTISLDCDTIYFSDILGDFRDGAPECGCSFYFEDGDTKPIFSYI
CFESGTKNIVDIREKVAISRYANTGAYAFPCGEQVRRACCEVLDNPVGKA
GEFYTSTIIKGMIHEGKKFVGIHVPDFWCVGTPVQLHTFLDAVRTGKVLP
RHKARFCFDLDRTLLSVSSRRGED
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mRNA from alignment at H-paniculata_contig12947:465..3097-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12947.1842.1 ID=mRNA_H-paniculata_contig12947.1842.1|Name=mRNA_H-paniculata_contig12947.1842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2633bp|location=Sequence derived from alignment at H-paniculata_contig12947:465..3097- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATGTTATGATACCCATGGGAGGTCGAGGATCCAGGTACAGGGCATT GTGGACTCTACTCTGTCAGTCAAGTGTAGCTGCCGTACTGCATGATACTA TCTCTCGATCACATTTGATATTGGAGATAATTTGATGTATTATATTAACT GCTGTTCGGTGGGAAACAGCTGAATATTCGTATGTGGTGTCGTATAGATA CAAGTACGGTTTATGCGATGTATGAATGATCAGTGACCCTGCTCGTTGTG TTTCAAGCTGCGCCCGCTCTATTTCGAGGGTATCTTGGATTGTCCCATTC TCTCGGTCTCGTTTTGACATGCTCTTCTGCTGTTGACAGCGTGGATGCAG ACACATGACGCAAAAGATCACGTGACATGATATATGTAGATTATCATAGT ATCCCAGGGTATGTCGACAAGCATCCAAACTAGAGAACTAATCGACCATC ACGGCAAATTAGCCTCGAATTATTCCAAGTAACAACGCAGTGGCGGGATT GGACACGGATGCTAAATTCATGCAGGTTTTCAAGTGAGGGCTACCACGTG CCCAAACCAATGATAAATATCGTCGGACGGCCGATGATCCTCTGGCTGTT GGATAATTTGAAGTTTCAACCTGAGGACACGTTATGGATAGGGATTCAGC GGAGCCTGAGCGCAGATTTTGCAGTCGAAGCGCGGCTGCGAAGAGAATAC CAGTCTCTCGACTTACGATTGGTCTTCCTAGACTTTCAGACGAGGGGTGC TGCCGAGACTCTGTTCATCATGCTGCAGGTAAAATTAGCGAAGACAAACA ATACGCGTAGTCTGTTTGCGATGTCGATCGTTTCACAGCAAATGCATTGT TTTCGAGAGGTCGACTTGGAAGTGGGGACTTGAGTGGACTTGGCCAAAGA TATTGCCGCTGTTCGATACCAATGTAGTAGGTACTGTATCATGGACAAGA TTCCGTATTCCATGTAGTTGCACAGCAGCACTATCTTGAGGTATTCATCC TAGCAACTAAGGTCTCATATCACGAGACGAGTAGCACGCGTATATGTGGT GGTAAGATATGTGATCTGCCACATTCCTTCGTAGTTTCATTCCATACTGG CGTTTCGCGGTTGCATCATCGAGTACAATTCGCAGCCACTGCTCTTTCCT CGGGTACTCACAATAACTATATGTAGTTGTACTCGGTGCGATTTTCAACT TACGGTGACCAGCATATGACATCTGAAGAGCTCCAACGCAAGACTATATC ATTGGACTGTGACACAATCTACTTCTCCGACATATTAGGAGACTTTCGAG ATGGCGCACCTGAGTGCGGCTGTAGCTTCTATTTCGAAGATGGGGATACC AAGGTGAGGAACTCTACAGGCTGATCGCCATCATGATGCGGCGTGTTCAG TGTAGTTAGCAGTGGCCGATGCGAACCGAGAGTGGGGGTTTCCTAGATGA CAACATTTCTTCGTGATCAATTGTCCTATTCGCTCCGATGGCTAGGCGAG TTGAGCGTTAGACACCTCCAATATTGGAGGGCAGTTACATTTCTCGCGTC TAACTTCACGCTGATCGTGTTCATTCTCGAGTTATTACTCTTCAGTCTAC GACAGACTGCCTGGTGTGCGAATAGTACGGTGCCTCGTTTGCTGTCCGAA ATTTACCGGAACAACCACATCACCTGACTACCGATGGTCTCATGATATAT GCTCCATTTTAATATTCCACGTGCCCCATGATCGATCGAAAAACCCAGCT GACACGAAAATACCGTGGGGCTGCCTCTTTCTCGAGAATGAACCGGCCAT CGTCCAGTGATGCTCTGATCCAAACTGACTACGTCCTCGTCCAATCCCAC CCCGCCGCCCATTTTTCTTCTAACAACCCCCCTTACCATTACCCATTATA TCCGAAATACCTGCGGGTATTTCTCTCGTCCAGCCCATATTCTCGTACAT TTGTTTCGAATCGGGTACAAAGAACATCGTCGATATCCGGGAGAAGGTGG CCATTTCTCGGTACGCCAACACCGGTGCATATGCATTCCCTTGCGGGGAG CAAGTACGAAGGGCCTGCTGTGAGGTGCTGGACAATCCTGTCGGGAAGGC AGGGGAATTCTACACGTCAACCATTATCAAAGGAATGATACACGAGGGTA AAAAGGTGTGTCGTGTTATCTACTTGTGCCCAACGTAAATCATGTTCCAC GATGTTGGGAGCAGAAACTGTACCGAAGGTCGACTGATCTTTGACACTCC CATCTTGCGAAAGGTGTTTACTGTTGCAGCGACTTTCGTCGTATTCCCTG TCAGGTGATACTGTTTTTCTCGGCTAGCGTTATGGCGAGTTTTGCGTTTT CCAAATTGTTACTTGCCCACGTCTGCTCACCGACAGCAACGCGTGACACA ACTTCGACGAATTCGTGTTGAGCGTTTGGCGTTTTTATCCGATCTCGTGC TGGCGCTTCCATCAGTTTGTCGGCATACACGTGCCTGATTTCTGGTGCGT TGGCACTCCAGTACAGCTCCACACTTTCTTGGATGCAGTCAGGACTGGTA AGGTATTACCAAGGCACAAGGCTCGGTTTTGCTTCGACCTCGATAGGACT CTTCTCAGCGTATCCTCGCGGCGAGGCGAGGAT
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Coding sequence (CDS) from alignment at H-paniculata_contig12947:465..3097-

>mRNA_H-paniculata_contig12947.1842.1 ID=mRNA_H-paniculata_contig12947.1842.1|Name=mRNA_H-paniculata_contig12947.1842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at H-paniculata_contig12947:465..3097- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATGTTATGATACCCATGGGAGGTCGAGGATCCAGATGAATGTTATG
ATACCCATGGGAGGTCGAGGATCCAGGTTTTCAAGTGAGGGCTACCACGT
GCCCAAACCAATGATAAATATCGTCGGACGGCCGATGATCCTCTGGCTGT
TGGATAATTTGAAGTTTCAACCTGAGGACACGTTATGGATAGGGATTCAG
CGGAGCCTGAGCGCAGATTTTGCAGTCGAAGCGCGGCTGCGAAGAGAATA
CCAGTCTCTCGACTTACGATTGGTCTTCCTAGACTTTCAGACGAGGGGTG
CTGCCGAGACTCTGTTCATCATGCTGCAGGTTTTCAAGTGAGGGCTACCA
CGTGCCCAAACCAATGATAAATATCGTCGGACGGCCGATGATCCTCTGGC
TGTTGGATAATTTGAAGTTTCAACCTGAGGACACGTTATGGATAGGGATT
CAGCGGAGCCTGAGCGCAGATTTTGCAGTCGAAGCGCGGCTGCGAAGAGA
ATACCAGTCTCTCGACTTACGATTGGTCTTCCTAGACTTTCAGACGAGGG
GTGCTGCCGAGACTCTGTTCATCATGCTGCAGCATATGACATCTGAAGAG
CTCCAACGCAAGACTATATCATTGGACTGTGACACAATCTACTTCTCCGA
CATATTAGGAGACTTTCGAGATGGCGCACCTGAGTGCGGCTGTAGCTTCT
ATTTCGAAGATGGGGATACCAAGCATATGACATCTGAAGAGCTCCAACGC
AAGACTATATCATTGGACTGTGACACAATCTACTTCTCCGACATATTAGG
AGACTTTCGAGATGGCGCACCTGAGTGCGGCTGTAGCTTCTATTTCGAAG
ATGGGGATACCAAGCCCATATTCTCGTACATTTGTTTCGAATCGGGTACA
AAGAACATCGTCGATATCCGGGAGAAGGTGGCCATTTCTCGGTACGCCAA
CACCGGTGCATATGCATTCCCTTGCGGGGAGCAAGTACGAAGGGCCTGCT
GTGAGGTGCTGGACAATCCTGTCGGGAAGGCAGGGGAATTCTACACGTCA
ACCATTATCAAAGGAATGATACACGAGGGTAAAAAGCCCATATTCTCGTA
CATTTGTTTCGAATCGGGTACAAAGAACATCGTCGATATCCGGGAGAAGG
TGGCCATTTCTCGGTACGCCAACACCGGTGCATATGCATTCCCTTGCGGG
GAGCAAGTACGAAGGGCCTGCTGTGAGGTGCTGGACAATCCTGTCGGGAA
GGCAGGGGAATTCTACACGTCAACCATTATCAAAGGAATGATACACGAGG
GTAAAAAGTTTGTCGGCATACACGTGCCTGATTTCTGGTGCGTTGGCACT
CCAGTACAGCTCCACACTTTCTTGGATGCAGTCAGGACTGGTAAGGTATT
ACCAAGGCACAAGGCTCGGTTTTGCTTCGACCTCGATAGGACTCTTCTCA
GCGTATCCTCGCGGCGAGGCGAGGATTTTGTCGGCATACACGTGCCTGAT
TTCTGGTGCGTTGGCACTCCAGTACAGCTCCACACTTTCTTGGATGCAGT
CAGGACTGGTAAGGTATTACCAAGGCACAAGGCTCGGTTTTGCTTCGACC
TCGATAGGACTCTTCTCAGCGTATCCTCGCGGCGAGGCGAGGAT
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