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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1927 |
| Cds size | 1191 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1293.1837.1 >prot_H-paniculata_contig1293.1837.1 ID=prot_H-paniculata_contig1293.1837.1|Name=mRNA_H-paniculata_contig1293.1837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=397bp
MMRRRDRERRLGRAPRLRSPMKNIVQKTITAAASPEDMSLDVNKDQPGAG
NCGNEMREIPRRSPVYSIFTAATDICSVGTKKHKQIDSVRFNEVVRVRFI
PTRCEMRAKGILQDVYWSKDDFRGFQNDFLELAWAVGIVPPGGGACMLRL
DSAALDLTAEAEAREPEKNNPDVESARKLSGVWRHSMGDGFANGGVDSAL
QGKGHQNVPVFRSCFATGYHSRASSAAAGGEDVTSTTPGLPDTSVSTTSY
DGPSDDSGLVTANTTANNSLLCTNNGPGHDDAAPAVQEKNTLNKNARSDD
DRNAINPAVDRQLRKNAAAVARGFSVAGANEGLAKDKISVSDQVRWCRFE
EGASTLVPRSSIDSRRWETQTGPKRGRGAPLPLQLSVLPWHRFCMP* back to topmRNA from alignment at H-paniculata_contig1293:14413..17474- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1293.1837.1 ID=mRNA_H-paniculata_contig1293.1837.1|Name=mRNA_H-paniculata_contig1293.1837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3062bp|location=Sequence derived from alignment at H-paniculata_contig1293:14413..17474- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGATGCTCGCAGCACAGTAGTGTCATACTGAACCAACCCACGTACCTGTT
GAAAAACCAGTTGGACTTAGACAGTTGAGCGGTCGTGGGATCGGGGTGCC
ATTGAGCAGATGATGCGGAGACGAGACAGAGAGCGGAGGCTCGGTAGAGC
CCCTAGGCTCCGCTCGCCTATGAAGAATATAGTCCAAAAGACAATAACGG
CAGCCGCATCACCTGAAGACATGTCCTTGGACGTCAACAAGGACCAGCCT
GGCGCGGGCAACTGTGGGAACGAGATGAGAGAGATACCGAGGAGATCTCC
AGTTTATTCTATCTTCACAGCGGCAACTGATATTTGCTCAGGTACGCGCC
TGCTTGCTAGCTCTAAATCGAGAGGTTCTCTGTGATAGAATACAATTAGA
GCGGGTTTATGGGTAGTTCAACCCGTCGTTTTCGTAATTTTTGCAACAAG
ATACCAGCTCCAACCTCCAACTTACGGTCCGCCCTTTGGGAGCCGGGACT
TCACAGAACTCCCGCCAAATTATTGCCTGAAAAACAGGGAACAGCAGTCC
CTATAGCATATTTTCGGAGCCGCTGCTGTCCAGACAGACAGCAGGTCGCT
ACGGACAGTTTATATGTAGCACAAACAGGAACCTGACAAGAATTCTGCGC
ACAACCAGGGCAGTACTAAAATATATTTTAGTTCCGAAATAGCCCATCGC
ACATGGCACCCAAAGGATCGCGAATGAAACGCACGTGCCACTACGATCCG
TAACTATATGATAGCTATCTAGTAGTAACTTCGGTATTGAAGATTGCGCT
CTCGGGTCAGTCAGGCTGACGGGGAAGGGAGTACAGTTAGTCTGAACTTA
CAGAATGAATCTGAATCACGTCCCGAAATATTTTAGCGGATACGACTTTA
GATACGACTGCTGTAAAATCAGTAGAGTGGGTTGCTCCCGTACTCTCGTG
CTTCTCCTAGATTAGTTGCGAGTGCCCGTTGTATCTTGTGTCTAGTGTCT
CTTGAGTATCTTTGTTCCGTATCTAGCTGTTCATAATCTGTCTATCTGTC
CGGTTCGAAAACAAAGAGTGCACATGTCATGCAGGCGGGTAGGTAGTCTC
TTCAGTAACAATTTGGGATAAGGATAGGGAGCTTTCCGAAAAGCGCTGTC
ATATCTGCAGGCAGTACTGTACTTTGTTATACCATATATTTACCACGTCA
CTGTCTGTATTAATAGTAACATTCGAAAGCAAAGGTATTGTTGCATGCCG
GGGGTCTCTCCGAAGTAGGTTCTAGTCCGCCACGCCACCCAGTCACCCCG
TGGGCAATAGTGCACAATCTGCCCGTGAGACAGCAGCAATGAGTTGACTT
GCAGTGGATCGAATTGCTGATCGGACTGTTGATCGAAATAATCAAAGGAG
AATAAAGACAGTTTGCCGACGCGAGAATCATGATCGTATTCTTTCCTTTT
TCGTTGGGCATTTTGTTGTATCACAGTAGGCACAAAAAAGCACAAACAGA
TCGATTCCGTGCGGTTCAACGAGGTGGTGCGGGTGCGATTCATCCCAACG
AGGTGTGAAATGCGGGCGAAGGGGATACTGCAGGACGTTTACTGGTCCAA
AGACGATTTTCGCGGGTTTCAGAACGATTTCTTGGAGCTTGCCTGGGCTG
TGGGGATCGTACCACCCGGTGGTGGAGCATGCATGCTTCGCTTGGATTCT
GCGGCGCTCGACTTGACTGCGGAGGCCGAGGCGAGGGAACCCGAAAAAAA
CAATCCGGACGTGGAATCCGCCCGCAAGCTTTCTGGCGTTTGGAGACACA
GTATGGGAGACGGTTTCGCCAACGGCGGTGTTGATTCCGCGCTCCAAGGA
AAGGGTCATCAGAACGTTCCTGTTTTCCGTAGTTGCTTCGCTACCGGCTA
TCATAGCAGAGCTAGTAGCGCGGCGGCGGGCGGTGAGGATGTCACCTCGA
CCACACCGGGGTTGCCTGACACCAGCGTTAGTACGACCTCCTACGACGGA
CCCAGTGACGATAGCGGACTTGTCACTGCCAACACCACCGCCAACAACAG
TCTCCTTTGCACGAACAATGGACCGGGTCACGATGATGCTGCTCCTGCCG
TTCAAGAGAAAAACACCCTCAACAAAAACGCCCGTTCTGACGATGACAGG
AATGCTATCAACCCCGCCGTCGACCGGCAGTTGAGAAAAAATGCGGCGGC
GGTGGCAAGAGGTTTTTCGGTCGCCGGTGCGAATGAGGGACTCGCCAAGG
ACAAAATAAGTGTTAGTGACCAGGTGCGATGGTGTCGATTTGAAGAGGGA
GCCTCGACGCTAGTGCCTCGATCTAGCATCGACTCTCGGAGGTGGGAGAC
CCAGACAGGTCCAAAGAGAGGCAGGGGTGCGCCGCTGCCTCTGCAGCTAT
CTGTACTGCCGTGGCACAGGTTTTGCATGCCATAGAGTAAAGGAGAACAA
GCGGGATAATGTCCGAGGTTATTGTGTTGCAATCATAAGAGAAACATTCA
GTTGGGCAAGCGGTGAAAGACAGAGTGTGGCATCTATTGCAGGATTGTGA
GTCATGGTGAGTCATGGTGAGACCGATAGTGGCGATTGTTGTTTGTATAA
TCGTGAAATCACATAAGGTTGTGCCAAAATTTCCCCAAATTGCAATGTCT
TCACTATTACTAAAATGAGCAAAATTATTTTTCCAACATTTTTGTTTTTA
CCCAGTTATGAAAGGGGGCAGGAAGTATCGTGTGTTCCACGGATGTGCGC
TTTGGTATACCCTCGGTATGTGCGATGTGAATCTCGCGAGGTGGGTGTGG
TAGGTATGCTCAAGCAACGACGAATACACCTAGAGATTTGCGGCGGGGAT
TGTTTTTGCGATATTTTTTTAACCTGAATACATGATAGCCTATTGTTTCC
CCGTGCTGAATGGGGGTACATGCTGGCATACATTTTGTATCATCTTTAGC
GGTTTATTGGGGGGGGTATGCTTGTACGTGAAGTATACGACTGAAAATTC
GTGTACTAAGAGATCACACGGAAGGCAGAGCTTAAACCACATCCCAAGAA
GTGCGAAATGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1293:14413..17474- >mRNA_H-paniculata_contig1293.1837.1 ID=mRNA_H-paniculata_contig1293.1837.1|Name=mRNA_H-paniculata_contig1293.1837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2382bp|location=Sequence derived from alignment at H-paniculata_contig1293:14413..17474- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGCGGAGACGAGACAGAGAGCGGAGGCTCGGTAGAGCCCCTAGGCT
CCGCTCGCCTATGAAGAATATAGTCCAAAAGACAATAACGGCAGCCGCAT
CACCTGAAGACATGTCCTTGGACGTCAACAAGGACCAGCCTGGCGCGGGC
AACTGTGGGAACGAGATGAGAGAGATACCGAGGAGATCTCCAGTTTATTC
TATCTTCACAGCGGCAACTGATATTTGCTCAGATGATGCGGAGACGAGAC
AGAGAGCGGAGGCTCGGTAGAGCCCCTAGGCTCCGCTCGCCTATGAAGAA
TATAGTCCAAAAGACAATAACGGCAGCCGCATCACCTGAAGACATGTCCT
TGGACGTCAACAAGGACCAGCCTGGCGCGGGCAACTGTGGGAACGAGATG
AGAGAGATACCGAGGAGATCTCCAGTTTATTCTATCTTCACAGCGGCAAC
TGATATTTGCTCAGTAGGCACAAAAAAGCACAAACAGATCGATTCCGTGC
GGTTCAACGAGGTGGTGCGGGTGCGATTCATCCCAACGAGGTGTGAAATG
CGGGCGAAGGGGATACTGCAGGACGTTTACTGGTCCAAAGACGATTTTCG
CGGGTTTCAGAACGATTTCTTGGAGCTTGCCTGGGCTGTGGGGATCGTAC
CACCCGGTGGTGGAGCATGCATGCTTCGCTTGGATTCTGCGGCGCTCGAC
TTGACTGCGGAGGCCGAGGCGAGGGAACCCGAAAAAAACAATCCGGACGT
GGAATCCGCCCGCAAGCTTTCTGGCGTTTGGAGACACAGTATGGGAGACG
GTTTCGCCAACGGCGGTGTTGATTCCGCGCTCCAAGGAAAGGGTCATCAG
AACGTTCCTGTTTTCCGTAGTTGCTTCGCTACCGGCTATCATAGCAGAGC
TAGTAGCGCGGCGGCGGGCGGTGAGGATGTCACCTCGACCACACCGGGGT
TGCCTGACACCAGCGTTAGTACGACCTCCTACGACGGACCCAGTGACGAT
AGCGGACTTGTCACTGCCAACACCACCGCCAACAACAGTCTCCTTTGCAC
GAACAATGGACCGGGTCACGATGATGCTGCTCCTGCCGTTCAAGAGAAAA
ACACCCTCAACAAAAACGCCCGTTCTGACGATGACAGGAATGCTATCAAC
CCCGCCGTCGACCGGCAGTTGAGAAAAAATGCGGCGGCGGTGGCAAGAGG
TTTTTCGGTCGCCGGTGCGAATGAGGGACTCGCCAAGGACAAAATAAGTG
TTAGTGACCAGGTGCGATGGTGTCGATTTGAAGAGGGAGCCTCGACGCTA
GTGCCTCGATCTAGCATCGACTCTCGGAGGTGGGAGACCCAGACAGGTCC
AAAGAGAGGCAGGGGTGCGCCGCTGCCTCTGCAGCTATCTGTACTGCCGT
GGCACAGGTTTTGCATGCCATAGTAGGCACAAAAAAGCACAAACAGATCG
ATTCCGTGCGGTTCAACGAGGTGGTGCGGGTGCGATTCATCCCAACGAGG
TGTGAAATGCGGGCGAAGGGGATACTGCAGGACGTTTACTGGTCCAAAGA
CGATTTTCGCGGGTTTCAGAACGATTTCTTGGAGCTTGCCTGGGCTGTGG
GGATCGTACCACCCGGTGGTGGAGCATGCATGCTTCGCTTGGATTCTGCG
GCGCTCGACTTGACTGCGGAGGCCGAGGCGAGGGAACCCGAAAAAAACAA
TCCGGACGTGGAATCCGCCCGCAAGCTTTCTGGCGTTTGGAGACACAGTA
TGGGAGACGGTTTCGCCAACGGCGGTGTTGATTCCGCGCTCCAAGGAAAG
GGTCATCAGAACGTTCCTGTTTTCCGTAGTTGCTTCGCTACCGGCTATCA
TAGCAGAGCTAGTAGCGCGGCGGCGGGCGGTGAGGATGTCACCTCGACCA
CACCGGGGTTGCCTGACACCAGCGTTAGTACGACCTCCTACGACGGACCC
AGTGACGATAGCGGACTTGTCACTGCCAACACCACCGCCAACAACAGTCT
CCTTTGCACGAACAATGGACCGGGTCACGATGATGCTGCTCCTGCCGTTC
AAGAGAAAAACACCCTCAACAAAAACGCCCGTTCTGACGATGACAGGAAT
GCTATCAACCCCGCCGTCGACCGGCAGTTGAGAAAAAATGCGGCGGCGGT
GGCAAGAGGTTTTTCGGTCGCCGGTGCGAATGAGGGACTCGCCAAGGACA
AAATAAGTGTTAGTGACCAGGTGCGATGGTGTCGATTTGAAGAGGGAGCC
TCGACGCTAGTGCCTCGATCTAGCATCGACTCTCGGAGGTGGGAGACCCA
GACAGGTCCAAAGAGAGGCAGGGGTGCGCCGCTGCCTCTGCAGCTATCTG
TACTGCCGTGGCACAGGTTTTGCATGCCATAG back to top
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