mRNA_H-paniculata_contig12913.1830.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12913.1830.1
Unique NamemRNA_H-paniculata_contig12913.1830.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: D8LB53_ECTSI (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB53_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 4.600e-166
Identity = 219/251 (87.25%), Postives = 233/251 (92.83%), Query Frame = 1
Query:    1 QANTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDP-TKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVCREQGVIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNEV 750
            QANTPTDFCFSFRGFRERGG T RHVDGWGV FFEGKGFRNF D+LPS LSP+A+LIC YPIKTRTVIAHVR+ATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDP T+  F +TKS RYTPVGDTDSE VFC+FLN LLD FP+ PP+MADVFVELKRLW+E+C E GVIFNFLLGQ GDTLFAGCWPGARPGSEVWNSLY+TVREFPFTTCQL+DDDCEVDFNTVT+PSDRVAVIATAPLTTNEV
Sbjct:    8 QANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPIANLICNYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPATRALFLQTKSKRYTPVGDTDSEAVFCFFLNRLLDAFPHAPPNMADVFVELKRLWKELCSESGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLIDDDCEVDFNTVTTPSDRVAVIATAPLTTNEV 258          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: A0A7S1J865_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J865_9EUGL)

HSP 1 Score: 300 bits (768), Expect = 6.600e-99
Identity = 143/249 (57.43%), Postives = 179/249 (71.89%), Query Frame = 1
Query:    7 NTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNG-PPSMADVFVELKRLWEEVC-REQGVIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 747
            NTPTDFCFSFRGF ER G TD H DGWGV F+EG+G R+F+D LP+  SPVA L+  YPIKT  +I+H+R AT G + L NVHPF+RELWG YW FAHNGD+     P  + F     + Y  VGDTDSE  F Y LN L+ ++PNG PP+ AD+++ ++ L+ ++C RE+G IFNFLL    D L  GCWPG+RPGS V+N L++ VRE+PF+  QL D DC +DF+ VT+P DRVAVIAT PLT NE
Sbjct:   24 NTPTDFCFSFRGFAERAGHTDVHKDGWGVAFYEGRGLRSFLDVLPAASSPVAKLVRDYPIKTLNMISHIRYATCGSLDLHNVHPFNRELWGKYWTFAHNGDL----GPETRRFLAKSVSPYRAVGDTDSEAAFVYILNELVKLYPNGTPPTTADLYLSVQSLFRQICEREEGCIFNFLLCDGVD-LIVGCWPGSRPGSTVYNGLHYIVREYPFSHAQLADCDCGIDFSEVTTPDDRVAVIATKPLTENE 267          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: A0A7S3PDV2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDV2_9STRA)

HSP 1 Score: 271 bits (692), Expect = 3.030e-86
Identity = 136/249 (54.62%), Postives = 167/249 (67.07%), Query Frame = 1
Query:   13 PTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVP-----SAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVCREQG--VIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLT 738
            PTDF FS +GF  RGG TD+H  GWG   +EG+G R F DTLP+  SP+A LI  Y I+T  ++AH+R ATQG+V LENVHPFSRELWG  W FAHNG+VP     SA +    G+ K K   ++PVGDTDSE VFC  LN L   FP G P++  +   L  + EE+  +     IFNFLLG    T+FA  WPGARPGSEVWN L++ +RE PF+T +L+D D  +DF TVT+P DRVAVI T PLT
Sbjct:   12 PTDFSFSLKGFCRRGGATDKHSHGWGTAIYEGRGLRCFHDTLPACKSPIAELIQNYSIRTYNMMAHIRYATQGEVSLENVHPFSRELWGIQWSFAHNGEVPMFTNVSADNVPLLGWTKCKDLHFSPVGDTDSEAVFCAILNALKAEFPEGLPTLPVLHEFLSYVCEEITHDHSNDTIFNFLLGCGQYTMFAYSWPGARPGSEVWNGLHYIIREPPFSTAKLLDVDYTIDFRTVTTPQDRVAVITTKPLT 260          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: A0A7S2UCJ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCJ0_9STRA)

HSP 1 Score: 271 bits (694), Expect = 4.360e-85
Identity = 137/253 (54.15%), Postives = 168/253 (66.40%), Query Frame = 1
Query:   10 TPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPS-----AKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVC--REQGVIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 747
            TPTDF FSFRGF +RGG TD+H  GWG+  +EG+G R F+D LP+  SPVA L+  YP+KT  ++AH+R ATQG V LENVHPF RE+WG  W FAHNG+VP       KD    G    + T Y PVGDTDSE  FC  LN L   F   P ++  ++  ++R   E+    E+  I NFLLG    TLFA  WPGARPGS+VWN LY+T+R  PF+T +L D D  VDF+ VT+P DRVAVIAT+PLT NE
Sbjct:   11 TPTDFTFSFRGFAKRGGETDKHEHGWGLAVYEGRGLRTFLDPLPAAKSPVAELVERYPMKTLNMLAHIRYATQGGVNLENVHPFQREMWGIQWSFAHNGEVPKYVNKECKDYPLLGRTNRRQTFYHPVGDTDSEATFCAILNGLRAEFTTLP-TLPVLYETIQRFCSEIVSDNEESTILNFLLGCGQYTLFAYSWPGARPGSQVWNGLYYTIRRPPFSTAKLTDVDYAVDFSQVTTPKDRVAVIATSPLTVNE 262          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: A0A3B9PL65_9RHOO (Class II glutamine amidotransferase n=2 Tax=Rhodocyclales TaxID=206389 RepID=A0A3B9PL65_9RHOO)

HSP 1 Score: 244 bits (623), Expect = 2.040e-77
Identity = 132/249 (53.01%), Postives = 157/249 (63.05%), Query Frame = 1
Query:    7 NTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVCREQGVI--FNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 747
            N PTD CFSF GFR RGG TD H DGWG+ FFEGKG R F+D  PS  SPVA L+  YPI++  VIAH+R ATQG+VRLEN HPF RELWG YWIFAHNG++        K F    S R+ PVG TDSE  FCY L+ L D FP G P+ A++   L+ L  E+    G +  FNFLL  +GD LFA C           + L + +R+ PF    L D+D  +DFN VT P+DRVAVIAT  LT NE
Sbjct:   10 NVPTDICFSFTGFRARGGLTDHHRDGWGIAFFEGKGARVFLDPAPSAQSPVAELVKHYPIRSLNVIAHIRKATQGEVRLENTHPFQRELWGRYWIFAHNGNL--------KHFAPPLSGRFLPVGTTDSERAFCYILDTLADRFPLGTPTAAELHAALRELAAEI----GALGEFNFLLS-DGDWLFAHCS----------SRLSYIIRQAPFPVAHLSDEDLALDFNRVTQPNDRVAVIATTALTDNE 235          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: A0A2P6ARF4_9GAMM (Class II glutamine amidotransferase n=1 Tax=Amnimonas aquatica TaxID=2094561 RepID=A0A2P6ARF4_9GAMM)

HSP 1 Score: 244 bits (623), Expect = 3.090e-77
Identity = 130/251 (51.79%), Postives = 157/251 (62.55%), Query Frame = 1
Query:    4 ANTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVCREQGVIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNEVRN 756
            AN PTD CFSF GFR RGG TD H DGWG+GFFE +G R F+DT  S  SP+A L+  YPI++R V+AH+R ATQG++RL+N HPF RE+ G YW+FAHNGD+   KD      F+ +  R  PVGDTDSE  FC+ LN +L   P+G P  A +   ++R+  EV R     FNFLL  NG+ L A C             L + VRE PF+   L DDD  VDF   T P DRVAVIATAPLT NE  N
Sbjct:    9 ANVPTDICFSFTGFRRRGGDTDHHADGWGIGFFEDQGCRVFIDTEASVNSPIAELVSAYPIRSRHVVAHIRKATQGQIRLQNTHPFQREIGGRYWLFAHNGDL---KD------FRGRPGRILPVGDTDSEEAFCHLLNQVLADHPDGRPDEAGLLASVQRVAREVSRHG--TFNFLLS-NGEWLLAHCS----------TQLAWIVREAPFSVAHLSDDDVSVDFRQQTGPDDRVAVIATAPLTDNEAWN 237          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: UPI00140836A3 (class II glutamine amidotransferase n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI00140836A3)

HSP 1 Score: 243 bits (620), Expect = 3.480e-77
Identity = 126/247 (51.01%), Postives = 154/247 (62.35%), Query Frame = 1
Query:    7 NTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVCREQGVIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 747
            N PTD CFSF GF  RGG TD H DGWG+ FFEG G R F+D  PST SPVA+L+  YPIK++ VIAH+R AT G V LEN HPF RELWG YW+FAHNGD+P        GF       Y PVG TDSE  FC  LN L  +FP G P + D++  L+ + + + R+   IFN+LL  +G+ LFA C             L + VR+ PF    L+D+D  VDF  +T+PSDRVA+IAT  LT NE
Sbjct:   10 NVPTDICFSFEGFSARGGKTDEHKDGWGIAFFEGAGCRLFLDDAPSTTSPVAALLREYPIKSKNVIAHIRKATVGAVGLENCHPFQRELWGHYWVFAHNGDLPHLSQQAP-GF-------YQPVGQTDSEQAFCQILNRLRQVFPLGKPDLPDLYPVLQDITQAIARQD--IFNYLLS-DGEHLFAHCS----------TKLCYLVRQAPFAAAHLIDEDLTVDFQELTTPSDRVAIIATTGLTDNE 235          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: A0A4T0UTE4_9NEIS (Class II glutamine amidotransferase n=2 Tax=Crenobacter TaxID=1654931 RepID=A0A4T0UTE4_9NEIS)

HSP 1 Score: 243 bits (619), Expect = 4.930e-77
Identity = 135/247 (54.66%), Postives = 156/247 (63.16%), Query Frame = 1
Query:    7 NTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVCREQGVIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 747
            NTPTD  FSF GF  RGG TD H DGWG+ FFEG G R F+D  PS+ SPVA L+  YPIK+  VIAH+R ATQG++RLEN HPF RE+WG YWIFAHNGD+ S   P   G F      Y PVG TDSE  FC+ L  L   +    P    ++ EL RL  E+ R  GV FNF+L  NG+ LFA C             L+F VR+ PF T  LVDDD  VDF TVT+P+DRVAVIAT PLT NE
Sbjct:   10 NTPTDILFSFEGFHRRGGLTDHHADGWGIAFFEGPGVRVFLDDKPSSESPVADLVRRYPIKSENVIAHIRKATQGEIRLENCHPFVREMWGRYWIFAHNGDLKSFAPPA--GHF------YRPVGGTDSERAFCHILETLRHKW-GAMPETGALYAELDRLAREI-RAFGV-FNFMLS-NGELLFAHCS----------THLHFIVRQAPFNTAHLVDDDVSVDFATVTTPNDRVAVIATQPLTDNE 234          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: A0A127K7L8_9RHOO (Class II glutamine amidotransferase n=3 Tax=Thauera TaxID=33057 RepID=A0A127K7L8_9RHOO)

HSP 1 Score: 243 bits (620), Expect = 6.000e-77
Identity = 132/247 (53.44%), Postives = 155/247 (62.75%), Query Frame = 1
Query:    7 NTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVCREQGVIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 747
            N PTD CFSF GFR RGG TD H DGWG+ FFEG G R F+D  PS  SPVA L+  YPI++  VIAH+R ATQG+VRLEN HPF RELWG YWIFAHNG++        K F  T + R+ PVG TDSE  FCY L+ L   FP G   +A++  EL+ L  E+       FNFLL  +GD LFA C           + L + VR+ PF    L D+D  VDFN VT+P DRVAVIAT PLT NE
Sbjct:   10 NVPTDICFSFAGFRARGGLTDHHRDGWGIAFFEGAGARVFLDPSPSADSPVAELVKHYPIRSLNVIAHIRKATQGEVRLENTHPFQRELWGRYWIFAHNGNL--------KNFAPTLTGRFLPVGTTDSELAFCYLLDRLAQRFPQGTRDIAELHAELRVLAIEIGSHGE--FNFLLS-DGDQLFAHCS----------SRLCYIVRKAPFPVAHLADEDLTVDFNEVTTPLDRVAVIATTPLTDNE 235          
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Match: H0PYP2_9RHOO (Glutamine amidotransferases class II n=1 Tax=Azoarcus sp. KH32C TaxID=748247 RepID=H0PYP2_9RHOO)

HSP 1 Score: 242 bits (618), Expect = 1.060e-76
Identity = 127/249 (51.00%), Postives = 159/249 (63.86%), Query Frame = 1
Query:    4 ANTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTLSPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGPPSMADVFVELKRLWEEVCREQGVIFNFLLGQNGDTLFAGCWPGARPGSEVWNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNEV 750
            +N PTD CFSF GFR RGG TD H DGWG+ FFEG+G R F+D  PS  SP+A L+ +YPI++  VIAH+R ATQG V L+N HPF RELWG YWIFAHNG++     P   G       R+ PVG+TDSE+ FC  L +L D FP+GPPS + +   L+RL   +       FNFLL  NG+ LFA C             L + +R+ PFT   L D+D  VDF+ +T+P+DRVA+IAT PLT NEV
Sbjct:    9 SNVPTDICFSFAGFRVRGGATDEHRDGWGIAFFEGRGVRVFLDPQPSIESPIAELVRSYPIRSLNVIAHIRKATQGTVTLDNTHPFQRELWGQYWIFAHNGNLADYT-PAFNG-------RFLPVGNTDSESAFCDILQHLADAFPDGPPSASALHEALRRLAIRIGHHGP--FNFLLS-NGERLFAHCA----------TRLAYIIRQAPFTVAHLSDEDLTVDFSQLTTPADRVAIIATTPLTDNEV 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12913.1830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB53_ECTSI4.600e-16687.25Glutamine amidotransferase type-2 domain-containin... [more]
A0A7S1J865_9EUGL6.600e-9957.43Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3PDV2_9STRA3.030e-8654.62Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2UCJ0_9STRA4.360e-8554.15Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A3B9PL65_9RHOO2.040e-7753.01Class II glutamine amidotransferase n=2 Tax=Rhodoc... [more]
A0A2P6ARF4_9GAMM3.090e-7751.79Class II glutamine amidotransferase n=1 Tax=Amnimo... [more]
UPI00140836A33.480e-7751.01class II glutamine amidotransferase n=1 Tax=Aphano... [more]
A0A4T0UTE4_9NEIS4.930e-7754.66Class II glutamine amidotransferase n=2 Tax=Crenob... [more]
A0A127K7L8_9RHOO6.000e-7753.44Class II glutamine amidotransferase n=3 Tax=Thauer... [more]
H0PYP2_9RHOO1.060e-7651.00Glutamine amidotransferases class II n=1 Tax=Azoar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12913contigH-paniculata_contig12913:443..3203 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score471.5
Seed ortholog evalue2.6e-130
Seed eggNOG ortholog2880.D8LB53
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glutamine amidotransferases class-II
EggNOG OGs2RXQT@2759,COG0121@1
Ec32 ortholog descriptionPutative glutamine amidotransferase type 2
Ec32 orthologEc-27_005170.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size777
Cds size777
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12913.1830.1prot_H-paniculata_contig12913.1830.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12913 443..3203 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929017.780086-CDS-H-paniculata_contig12913:442..5171622929017.780086-CDS-H-paniculata_contig12913:442..517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 443..517 -
1691480701.054749-CDS-H-paniculata_contig12913:442..5171691480701.054749-CDS-H-paniculata_contig12913:442..517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 443..517 -
1622929017.7905312-CDS-H-paniculata_contig12913:1000..11371622929017.7905312-CDS-H-paniculata_contig12913:1000..1137Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 1001..1137 -
1691480701.0705023-CDS-H-paniculata_contig12913:1000..11371691480701.0705023-CDS-H-paniculata_contig12913:1000..1137Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 1001..1137 -
1622929017.8038735-CDS-H-paniculata_contig12913:1646..17661622929017.8038735-CDS-H-paniculata_contig12913:1646..1766Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 1647..1766 -
1691480701.0805557-CDS-H-paniculata_contig12913:1646..17661691480701.0805557-CDS-H-paniculata_contig12913:1646..1766Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 1647..1766 -
1622929017.8138826-CDS-H-paniculata_contig12913:2317..24811622929017.8138826-CDS-H-paniculata_contig12913:2317..2481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 2318..2481 -
1691480701.0898497-CDS-H-paniculata_contig12913:2317..24811691480701.0898497-CDS-H-paniculata_contig12913:2317..2481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 2318..2481 -
1622929017.8259535-CDS-H-paniculata_contig12913:2922..32031622929017.8259535-CDS-H-paniculata_contig12913:2922..3203Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 2923..3203 -
1691480701.1012938-CDS-H-paniculata_contig12913:2922..32031691480701.1012938-CDS-H-paniculata_contig12913:2922..3203Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12913 2923..3203 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12913.1830.1

>prot_H-paniculata_contig12913.1830.1 ID=prot_H-paniculata_contig12913.1830.1|Name=mRNA_H-paniculata_contig12913.1830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=259bp
QANTPTDFCFSFRGFRERGGGTDRHVDGWGVGFFEGKGFRNFVDTLPSTL
SPVASLICTYPIKTRTVIAHVRLATQGKVRLENVHPFSRELWGSYWIFAH
NGDVPSAKDPTKKGFFKTKSTRYTPVGDTDSETVFCYFLNNLLDIFPNGP
PSMADVFVELKRLWEEVCREQGVIFNFLLGQNGDTLFAGCWPGARPGSEV
WNSLYFTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNEV
RNSEIRID*
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mRNA from alignment at H-paniculata_contig12913:443..3203-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12913.1830.1 ID=mRNA_H-paniculata_contig12913.1830.1|Name=mRNA_H-paniculata_contig12913.1830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2761bp|location=Sequence derived from alignment at H-paniculata_contig12913:443..3203- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCCAACACCCCAACGGACTTTTGTTTCTCCTTTCGGGGTTTCCGTGA GCGAGGAGGCGGGACCGACCGCCACGTGGATGGATGGGGCGTTGGATTTT TTGAGGGCAAGGGATTTAGGAACTTCGTGGACACGCTGCCCAGTACGCTC AGTCCTGTGGCGTCTCTGATCTGTACATATCCGATCAAGACTCGCACGGT TATTGCGCACGTCCGGCTGGCCACGCAGGGCAAGGTTAGACTCGAGAATG TCCACCCCTTTTCCAGGGAGCTATGGGGCAGGTGAGTTGGCGGGGCTGAC GTGGGTCTGTAGTGGCGCGACGTGATGGTGGCTGTCTGTCTATTGTCAGT TAGCCTCGGTTGCTTGTACGTGTTTTAGATGCTGATTGGAGGGTTTGCCG GTCGGGTTGAGCGTGGAACCGTTCACCAGAGGGAGTAGTTGTAATTCGTT TCTTATGCCTTGAGCGGTCGTGCTTGAATGAATGCAGAAAGGGGTTCACA CAGGACATGTTTTCGCGTTAGTTGTCGTGAATCTCTTGCCGAGTAACATG TGTGACCCCTCCACAGTATTGGATCATTTTCCAGGGTCATGATCGTATTG ATTATACATGTGTGAAACCTTTCGTGTGTCCTATCTCACGAACGTATTGC CTGTTTTGCCGCACGACACCGCATACACATACACACATACGCACACACAC ACTTGGATTTATGGGACTACAGCTATTGGATATTTGCGCATAACGGTGAC GTACCTTCGGCTAAAGATCCGACGAAGAAAGGATTTTTCAAGACAAAAAG CACGCGATACACGCCAGTAGGAGACACGGACAGCGAGACGGTATTCTGCT ACTTCCTCAACAATCTTTTGGATATTTTCCCGAACGGTGTGTGTGTGTGT TTGTGTGTGTGGTACCCTCTTTAGTACAGCATTGAACATTTGTTTTTAAA CGCGGGCGGTTTTGCCCTCTATATCGTGTTGTGTTCCTCCTCGGATTTCG TCCATCAGACTACTACGGGTTTTGCCTCGCGTTCGTTTGCTTTGCCTCCT TCGATCCTGTTTTTTTTTCGTGTATCGCCGACGTGGAGAACTTGCTAGTG ATGGGTAGTTTGCCGTGAACGCCCGAAATACCGTTCCTCTTTAGCATGTC GTGATACACCTCCGGCTTGTCCGCACGCATCCTTTCGACGTAGGTCGCGT CTTCCTCTATGAGTGCATCGCATCTCTTATGTAGAGCATCGAAGCAACGA ACTGCTCTTCCTTTTATTGCGTTCGACTACTCGTCGTTAAAGACTCCTCC ACGCGAAATGCCGATGGGTCTATACATTCTAGGGACGCTTGTGACGAGAA GCCAACTCGCACGCGCAAGCCCCTCCTCACACACCTATCGATAGCTTTCA TTCGGTGCCTCGGTATTCTCTTTGCGCTGCTCTGCAGGACCGCCGAGTAT GGCCGACGTGTTCGTGGAGTTGAAACGGTTGTGGGAAGAGGTGTGCCGCG AGCAGGGAGTGATATTCAACTTTTTGCTCGGGCAGAACGGAGACACGTTG TTCGCAGGTCAGTCTATTTGTTCACAAGACGTGATGTGCGGAGAATAAAT ATCGTATTTACTCTACGGATGTTGTATCGTAGGGTTTCCGACTGGGGGCT CGAGTGAAGCGTTTTGCCTCGTGGAAGGAGGTCGCTTGAGAGGTGATCGC TCACCGAGAAGACCAACTCGGTGTGGGTGATGGTACTAGAGCACCGGTCG TTTATCGAGGAGCTGTAAAACGCTCCAGCGTCCTGTAAAAACTGACAGCG CTCGTGGTTTGATTGGGGCGTTTTCAGGCATTGCAACATGTTGTCTACAG AGCGGACGTGAACATGTCCGAATCCACCTGGAAAATAGAAATGTACCAGA TAGTCTATCGCCCGCTGTGAAGCATGTTGAAAGGGGGGTAGACTTGTTTT TCGTTTGCCGTCTTTATTAACCTCGGTATATCGCTGCGATATGTTTTGAA TATTTGTGTTTACTTTTGTCGCTGCCCTCCCCCTCCCTAACTCTAACCCA TGCCATTGTTGTGTAGGGTGTTGGCCTGGAGCAAGGCCGGGCTCCGAGGT GTGGAACAGTCTTTACTTCACCGTCAGAGAGTTTCCTTTTACTACGTGCC AGCTAGTTGATGACGACTGTGAAGTGGATTTCAACACGGTGACTTCGCCG AGTGTGAGTAACAAGGGCGAGCGATACTCGCGGGATGTGGTTCCGTGCTC ATGTTGGCGTGGTGATTTTTGTGTACTTTTCGATTCTTGTCCAGTTGTGC TTTCACTTCGTCGTTCTTTCTATATGCATGGCTTGGCACTGTCGTGTAAT TTTTTATGTCATTTTTTGGGGGGGAAATTGAGTTGCGACAAATCGCGCAA TATACTGCCGTTGTACTCGTTATCACTGCGTCATGAGCGCTACCGTATGG GTCATAATGCTTGATCTTGTTGAACGGAAGGGGATCAAACGCAGGAGACG CAATGATTTACCACGAAAAACAATGAGGCGTGCATGCAGCCGTCGATTCT TGTACTCGTGCGATATTATCTTTGATATTTTTTGATCGCACTGTTTCCTG TCCCCCTAAAACTCAACCCCCCTCCCACCCTTGTTCGTTGATGGGATGTC CCACACGTCCATCTTTGTGCGCGCCATGCCGTTTAGGATCGCGTGGCCGT CATCGCTACTGCTCCGCTGACCACCAATGAGGTCAGGAATTCCGAGATTC GAATCGATTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig12913:443..3203-

>mRNA_H-paniculata_contig12913.1830.1 ID=mRNA_H-paniculata_contig12913.1830.1|Name=mRNA_H-paniculata_contig12913.1830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1554bp|location=Sequence derived from alignment at H-paniculata_contig12913:443..3203- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCCAACACCCCAACGGACTTTTGTTTCTCCTTTCGGGGTTTCCGTGA
GCGAGGAGGCGGGACCGACCGCCACGTGGATGGATGGGGCGTTGGATTTT
TTGAGGGCAAGGGATTTAGGAACTTCGTGGACACGCTGCCCAGTACGCTC
AGTCCTGTGGCGTCTCTGATCTGTACATATCCGATCAAGACTCGCACGGT
TATTGCGCACGTCCGGCTGGCCACGCAGGGCAAGGTTAGACTCGAGAATG
TCCACCCCTTTTCCAGGGAGCTATGGGGCAGCAGGCCAACACCCCAACGG
ACTTTTGTTTCTCCTTTCGGGGTTTCCGTGAGCGAGGAGGCGGGACCGAC
CGCCACGTGGATGGATGGGGCGTTGGATTTTTTGAGGGCAAGGGATTTAG
GAACTTCGTGGACACGCTGCCCAGTACGCTCAGTCCTGTGGCGTCTCTGA
TCTGTACATATCCGATCAAGACTCGCACGGTTATTGCGCACGTCCGGCTG
GCCACGCAGGGCAAGGTTAGACTCGAGAATGTCCACCCCTTTTCCAGGGA
GCTATGGGGCAGCTATTGGATATTTGCGCATAACGGTGACGTACCTTCGG
CTAAAGATCCGACGAAGAAAGGATTTTTCAAGACAAAAAGCACGCGATAC
ACGCCAGTAGGAGACACGGACAGCGAGACGGTATTCTGCTACTTCCTCAA
CAATCTTTTGGATATTTTCCCGAACGCTATTGGATATTTGCGCATAACGG
TGACGTACCTTCGGCTAAAGATCCGACGAAGAAAGGATTTTTCAAGACAA
AAAGCACGCGATACACGCCAGTAGGAGACACGGACAGCGAGACGGTATTC
TGCTACTTCCTCAACAATCTTTTGGATATTTTCCCGAACGGACCGCCGAG
TATGGCCGACGTGTTCGTGGAGTTGAAACGGTTGTGGGAAGAGGTGTGCC
GCGAGCAGGGAGTGATATTCAACTTTTTGCTCGGGCAGAACGGAGACACG
TTGTTCGCAGGACCGCCGAGTATGGCCGACGTGTTCGTGGAGTTGAAACG
GTTGTGGGAAGAGGTGTGCCGCGAGCAGGGAGTGATATTCAACTTTTTGC
TCGGGCAGAACGGAGACACGTTGTTCGCAGGGTGTTGGCCTGGAGCAAGG
CCGGGCTCCGAGGTGTGGAACAGTCTTTACTTCACCGTCAGAGAGTTTCC
TTTTACTACGTGCCAGCTAGTTGATGACGACTGTGAAGTGGATTTCAACA
CGGTGACTTCGCCGAGTGGTGTTGGCCTGGAGCAAGGCCGGGCTCCGAGG
TGTGGAACAGTCTTTACTTCACCGTCAGAGAGTTTCCTTTTACTACGTGC
CAGCTAGTTGATGACGACTGTGAAGTGGATTTCAACACGGTGACTTCGCC
GAGTGATCGCGTGGCCGTCATCGCTACTGCTCCGCTGACCACCAATGAGG
TCAGGAATTCCGAGATTCGAATCGATTGAGATCGCGTGGCCGTCATCGCT
ACTGCTCCGCTGACCACCAATGAGGTCAGGAATTCCGAGATTCGAATCGA
TTGA
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