mRNA_H-paniculata_contig1291.1826.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: A0A6H5KFS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS5_9PHAE) HSP 1 Score: 235 bits (600), Expect = 9.300e-69 Identity = 182/441 (41.27%), Postives = 226/441 (51.25%), Query Frame = 2 Query: 227 RPIGKRYKLIVASNRDEVLDRPTAAMSFWEEGASNILAG--------RDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAV--------------------------------------------PVIGRQTSEVAAASRSSGLALAMGMLCA--GLVTAS---VGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDALADERFLPPAVNSYGDWPSSLLPAWNRESQRVCIPPT----RMRCLWSKLGY-----GTRSQTVVLVHKSGRMKVVERNLC----GDGQQQADP------------------------IRSASRNTFEFCDI 1267 R I RYKLIVASNRDE L RPTA + FW++ SN+LAG RDL AGGTWLGV+R GKFA+LTNV S W+ + + + A+ P +G T A +S SS L + LCA GLVTA+ + +A AR +A R+SRG LV +FLK +E+AE YC RL KER R+ GFNLVL+D SGAW++SN D AG+TRLP G YGI N TLD P+ K+LHGKSRVL LLR+ +DP L+E+ LVDLLMD LADE L GD Q VC+PPT ++ W+K GTRS TVVLV +GR +VVERNL G G++ +R A R + EFCD+ Sbjct: 17 RGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGEYPKARPRRDLVAGGTWLGVSRSGKFATLTNVFSTWESMLEVVALGGWANKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLGFSTP--AGSSSSSSLLGWLYALCAAAGLVTAASVPLAVAVARIKA-RKSRGGLVADFLK--GDEDAETYCARLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMLHGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADETPLLA-----GD-----------PCQCVCMPPTVWLLGLKLPWAKSPSRPPMRGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEXXXXXXXXXXXXXXXXXXXXXXXAEICRMRDADRTSVEFCDV 436
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: D8LBN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN3_ECTSI) HSP 1 Score: 173 bits (438), Expect = 1.900e-46 Identity = 122/272 (44.85%), Postives = 148/272 (54.41%), Query Frame = 2 Query: 227 RPIGKRYKLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVP------------------------------------------------VIGRQTSEVAAASRSSGLALAMGMLCA--GLVTAS---VGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPK 883 R I RYKLIVASNRDE L RPTA + FW++ SN+LAGRDL AGGTWLGV+R GKFA+LTNV S W+ + + T+ A +AA A V S A +S SS + LCA GLVTA+ + +A AR +A R+SRG LV +FLK +E+AE YC RL KER RY GFNLVL+D SGAW++SN D AG+TRLP G YGI N TLD P+ K Sbjct: 17 RGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWENVL-------EDVTLGGWANKVAAVAXXXXXXXXXXXXXXXXXRAGHENGISXXXXXXXXXXXXXXXXXXXXXXXXVSSLGLSRPAGSSLSSSSLGWLYALCAAAGLVTAASVPLAVAVARAKA-RKSRGGLVADFLK--GDEDAETYCSRLSKERRRYAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAK 278
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: A0A848Y2H2_9BACT (NRDE family protein n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848Y2H2_9BACT) HSP 1 Score: 126 bits (316), Expect = 1.260e-29 Identity = 104/340 (30.59%), Postives = 143/340 (42.06%), Query Frame = 2 Query: 242 RYKLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVPVIGRQTSEVAAASRSSGLALAMGMLCAGLVTASVGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDAL-ADERFLPPAVNSYGDWPSSLLPAWNRESQRVCIPPTRMRCLWSKLGYGTRSQTVVLVHKSGRMKVVERNLCGDGQQQADPIRSASRNTFEF 1258 RY+L+ A+NRDE RPTA ++W+E +LAGRDL AGGTW+GVTR G++ +LTNV + H + +SRG+L FL G E AEQY R++ ER RYN FNL++ D W VS+ A RL PG+YG+ NATL VP+PK+ G + AL +P +A + L D A + LP + + AW R + I + YGTR+ V+L+ G VER A +A+ TF+F Sbjct: 13 RYRLVFAANRDEAYARPTAPSAWWDE-CPGVLAGRDLNAGGTWMGVTRTGRWTALTNVRDV--------QAHHEGA------------------------------------------------------------QSRGDLTRAFLCGG--EAAEQYAARVFAERARYNPFNLLVGDGEAVWTVSSHTEA-PERLAPGVYGLSNATLQVPWPKVTRGLAAFEQALAVEKPEP----EAFFEFLRDETRAPDEVLPE---------TGVGRAWERVLSPLFI---------TSADYGTRASMVLLLDAEGSGAFVERTF-------APGTLAATTRTFDF 251
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: A0A7C3TTJ4_9DELT (NRDE family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3TTJ4_9DELT) HSP 1 Score: 124 bits (312), Expect = 5.720e-29 Identity = 101/320 (31.56%), Postives = 138/320 (43.12%), Query Frame = 2 Query: 242 RYKLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVPVIGRQTSEVAAASRSSGLALAMGMLCAGLVTASVGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDALADERFLPPAVNSYGDWPSSLLPAWNRESQRVCIPPTRMRCLWSKLGYGTRSQTVVLVHKSGRMKVVERNLCG 1201 RY+LI A+NRDE DRPT FW++ A ++LAGRDL+ GGTWLG+TR GKFA++TN AS+ A SRG+LV +FL +A Y +++ + RYNGFNL+ D S + SN + RL PG+YG+ NA LD P+PK+L GK + AL + AL + L LAD + PP + + P W + V I YGTRS TV+ ++G + VER+ G Sbjct: 13 RYRLIAAANRDEFFDRPTLPAQFWDD-APHVLAGRDLKEGGTWLGITRQGKFAAVTNFRD-------------------------------------------------------------PASIKPDAP-------SRGQLVADFLTGRV--SAATYMEKVSRIGHRYNGFNLICGDPSDLFYYSNR--GDLRRLSPGVYGLSNALLDSPWPKVLKGKKAMEAALQHKGT-------ALEEQLFHMLADRKTAPPHRLPQ----TGVTPEWEKVLSAVFIQSPN---------YGTRSSTVIRFAQNGWVTFVERSFNG 239
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: A0A8D3XY39_9PSED (Uncharacterized protein n=10 Tax=Pseudomonas TaxID=286 RepID=A0A8D3XY39_9PSED) HSP 1 Score: 122 bits (307), Expect = 2.370e-28 Identity = 104/326 (31.90%), Postives = 146/326 (44.79%), Query Frame = 2 Query: 236 GKRYKLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVPVIGRQTSEVAAASRSSGLALAMGMLCAGLVTASVGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDALADERFLPPAVNSYGDWPSSLLPA-WNRESQRVCIPPTRMRCLWSKLGYGTRSQTVVLVHKSGRMKVVERNLCGDGQ 1210 G L+VA+NRDE +RP+ A+ WE+ A I+AGRDL+AGGTW+G+T G+FA+LTN+ IG Q A +RSRGEL FL+ E E + + L Y GFNL++ D W + NS + V RLP G+YG+ NA LD P+PKL ++ LL +P + +AL++LL D A +S + PS+ +P W R + I + GYGTR+ T +L H GR+ VVER+ DG+ Sbjct: 11 GHPLPLVVAANRDEFHERPSLALGRWED-APEIIAGRDLQAGGTWMGITETGRFAALTNIR---------------------------------IGGQP------------------------------------AGKRSRGELPEAFLR--GEAAPESFLRALCGRLQDYAGFNLLVGDRDELWHL-NSHSGTVQRLPGGVYGLSNADLDSPWPKLERARAAFTHCLL----EP--TPEALLELLADRQR-------AADS--ELPSTGVPLEWERLLSSIFI---------ASPGYGTRASTALLHHADGRLVVVERSYAADGR 239
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: A0A0M3QGR7_9DELT (Uncharacterized protein n=1 Tax=Desulfuromonas soudanensis TaxID=1603606 RepID=A0A0M3QGR7_9DELT) HSP 1 Score: 122 bits (306), Expect = 3.880e-28 Identity = 110/332 (33.13%), Postives = 143/332 (43.07%), Query Frame = 2 Query: 245 YKLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVPVIGRQTSEVAAASRSSGLALAMGMLCAGLVTASVGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDALADERFLPPAVNSYGDWPSSLLP--AWNRESQRVCIPPTRMRCLWSKLGYGTRSQTVVLVHKSGRMKVVERNLC-GDGQQQADPIR 1231 Y LI+A+NRDE DRPTA FW E + +LAGRDLR GGTWLGVTR G+++++TNV DR T + G RSRGELV FL EE+ E + +L E Y GFNL+ W +SN GV L PGLYG+ NA LD P+PK++ + + AL LS +L L LAD R +PP S LP + +R+ PP + YGTRS TV++V G+ ++ER G+G IR Sbjct: 14 YPLILAANRDEFYDRPTAPARFWPE-SPRLLAGRDLRRGGTWLGVTRDGRWSAVTNVREA-DR---------------------------------------------------------TMTGG----------RSRGELVKGFL--AGEESPEDFLSQLNAEAGTYPGFNLLAGTPENLWYLSNR-VDGVRLLSPGLYGLSNALLDTPWPKVVRCRRALASALA-------LSGSSLEADLFALLAD-RNVPP---------DSELPDTGFGLPWERLLSPPFIL-----SPAYGTRSSTVLMVSGDGQASLIERTFSPGEGPDHFKEIR 251
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: A0A841GYF6_9BACT (Uncharacterized protein with NRDE domain n=1 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841GYF6_9BACT) HSP 1 Score: 121 bits (303), Expect = 1.120e-27 Identity = 98/324 (30.25%), Postives = 139/324 (42.90%), Query Frame = 2 Query: 242 RYKLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVPVIGRQTSEVAAASRSSGLALAMGMLCAGLVTASVGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDALADERFLPPAVNSYGDWPSSLLPAWNRESQRVCIPPTRMRCLWSKL----GYGTRSQTVVLVHKSGRMKVVERNLCG 1201 RY+LIVA+NRDE RPTA +W++ A +LAGRDLR GGTW+G+TR G+FA++TNV T V T SRGELV+ FL+ +AE Y + + + GFNL++AD W V+N AA +L PG+YG+ NATLD P+PK++ + + AL A+D R L +L D +A A + + + R R L S YGTR+ T++ + + G + VER + G Sbjct: 13 RYRLIVAANRDEFYARPTAPAGWWDD-APGLLAGRDLRGGGTWMGITRGGRFAAITNVRDM---------TAVPPGTP-----------------------------------------------------------SRGELVSGFLRGSA--SAEAYAREVAVRGRDHAGFNLLVADGESMWYVTNR-AADAVQLAPGVYGLSNATLDTPWPKVVRARDAMRSAL--EAADDREWNAGLWSMLTDRVA---------------------AADHDLPDTGVGAVRERVLSSPFIASDEYGTRASTLLTISREGEVHFVERTVAG 241
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: A0A2T2S3X0_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium QH_10_64_37 TaxID=1919091 RepID=A0A2T2S3X0_9BACT) HSP 1 Score: 120 bits (302), Expect = 1.340e-27 Identity = 100/321 (31.15%), Postives = 141/321 (43.93%), Query Frame = 2 Query: 245 YKLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVPVIGRQTSEVAAASRSSGLALAMGMLCAGLVTASVGIAAARRRATRRSRGELVTEFLKKGTEENA-EQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTR-LPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDA--LADERFLPPAVNSYGDWPSSLLPAWNRESQRVCIPPTRMRCLWSKLGYGTRSQTVVLVHKSGRMKVVERNL 1195 Y L+ A NRDE+ +RP+A ++W++ A ++L GRDL+AGGTWLGVTR G +A++TNV R R SRG LV E+L TEE A E Y + + E RYNGFNL++ G + SN D G R + G++G+ NA LD P+PK+ G A LR D ++ D L+D+L D D++ V + +++R+ PP YGTRS TV+L+H+SG + VERN Sbjct: 14 YPLVFAGNRDELYERPSAPAAYWDD-APHVLGGRDLKAGGTWLGVTRHGHWATVTNVRDQMPR--------------------------------------------------------------------RDDAPSRGHLVAEYL---TEEPAPETYLETVEAEADRYNGFNLLVGTPDGTFYFSNRD--GTPRSVEAGVHGMSNAQLDDPWPKVERGT-----AALRAVLDGEVTPDPLLDILHDRRPAPDDQLPDTGVGT--------------DTERMLSPP-----FVETKEYGTRSSTVILMHRSGTVTFVERNF 236
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: UPI000E2F576F (NRDE family protein n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI000E2F576F) HSP 1 Score: 120 bits (302), Expect = 1.540e-27 Identity = 97/325 (29.85%), Postives = 139/325 (42.77%), Query Frame = 2 Query: 245 YKLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVPVIGRQTSEVAAASRSSGLALAMGMLCAGLVTASVGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDALADERFLPPAVNSYGDWPSSLLPAWNRE--SQRVCIPPTRMRCLWSKLGYGTRSQTVVLVHKSGRMKVVERNLCGDGQQ 1213 Y L++A+NRDE RPTAA FW ++LAGRDL+AGGTW+G+TR G+FA++TN R S A A R SRGEL ++L +E Q+ R ++ +Y GFNL+ D W SN+ G L PGLYG+ NA+LD P+PK+ GK R+ + L+R + E L + L D + D R P + P L A + + +Q +C YGTR+ T + V ++G M E + G++ Sbjct: 14 YPLLMAANRDEFHARPTAASGFWPA-RPHLLAGRDLQAGGTWMGITRGGRFAAITNF------------------------------------RDPSRSAPAPR--------------------------------SRGELPLDWL--DGQEPPRQWLARRAEQAGQYAGFNLLFGDRHALWYWSNAGGGGQRALAPGLYGLSNASLDTPWPKVELGKQRLQNLLVRGNKVGKKGELQLHEALQDIVQDRRLAAPDALA----PLGLGEAMDEQLSAQFICTS-----------AYGTRATTTLAVSRAGTMDWRETSFDASGRE 252
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Match: A0A2N6EAJ6_9DELT (Uncharacterized protein n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6EAJ6_9DELT) HSP 1 Score: 119 bits (297), Expect = 6.530e-27 Identity = 103/318 (32.39%), Postives = 136/318 (42.77%), Query Frame = 2 Query: 248 KLIVASNRDEVLDRPTAAMSFWEEGASNILAGRDLRAGGTWLGVTRCGKFASLTNVPSCWDRLFLLAETHVKSTTIASAAMVIAAAAVPVIGRQTSEVAAASRSSGLALAMGMLCAGLVTASVGIAAARRRATRRSRGELVTEFLKKGTEENAEQYCKRLYKERWRYNGFNLVLADSSGAWVVSNSDAAGVTRLPPGLYGIGNATLDVPYPKLLHGKSRVLDALLRVASDPRLSEDALVDLLMDA--LADERFLPPAVNSYGDWPSSLLPAWNRE-SQRVCIPPTRMRCLWSKLGYGTRSQTVVLVHKSGRMKVVERN 1192 +L++A+NRDE RPTA +FWEE A +L+GRDL+ GG+W G+TRCG+ A++TN R E+ S GL LV+++L EE Y +R+ + Y GFNL+ D G W SN V RLPPGLYG+ N LD P+PK+ GK L A L DP +AL LL D +AD LP +G P W R S R P YGTRS +V+LV + GR++ ER+ Sbjct: 15 RLVMAANRDEFFARPTAPAAFWEE-APGVLSGRDLQGGGSWFGITRCGRLAAVTNF------------------------------------RDRGELQEGGTSRGL--------------------------------LVSDYLL--GEEPPGDYLRRVARRGAEYKGFNLLAGDGEGLWYYSNRQGR-VRRLPPGLYGLSNHLLDTPWPKVAGGKV-ALAAALDGTPDP----EALFALLADTTRVADAE-LPDT--GFG-------PEWERILSSRFIAGPD----------YGTRSSSVLLVGREGRVEFTERS 235 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1291.1826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1291.1826.1 >prot_H-paniculata_contig1291.1826.1 ID=prot_H-paniculata_contig1291.1826.1|Name=mRNA_H-paniculata_contig1291.1826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=411bp MPLEQRRGVEIMCLLFLYHALEHPDDGNASGEKLDLNYQPHRSTTSTSSTback to top mRNA from alignment at H-paniculata_contig1291:9393..15233+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1291.1826.1 ID=mRNA_H-paniculata_contig1291.1826.1|Name=mRNA_H-paniculata_contig1291.1826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5841bp|location=Sequence derived from alignment at H-paniculata_contig1291:9393..15233+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1291:9393..15233+ >mRNA_H-paniculata_contig1291.1826.1 ID=mRNA_H-paniculata_contig1291.1826.1|Name=mRNA_H-paniculata_contig1291.1826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2466bp|location=Sequence derived from alignment at H-paniculata_contig1291:9393..15233+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |