mRNA_H-paniculata_contig12907.1824.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: J4VU23_BEAB2 (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Beauveria bassiana (strain ARSEF 2860) TaxID=655819 RepID=J4VU23_BEAB2) HSP 1 Score: 85.1 bits (209), Expect = 3.290e-17 Identity = 41/93 (44.09%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 13 SASYLPVEPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETF 291 +A L EPNNR+ AS E +QW++A + E LI N+ W VKRP D+ V+ + ++KR +G +GE+ +HK R V +GF QI GL + ET+ Sbjct: 108 AAIMLGPEPNNRKSALASAEREQWEQAMQEEYNSLIENQTWTVVKRPADRKVLTGRWVFKRKLGSDGEVARHKARFVVRGFSQIYGLDFDETY 200
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A179EXK4_METCM (Retrotransposon protein, Ty1-copia subclass n=2 Tax=Pochonia chlamydosporia 170 TaxID=1380566 RepID=A0A179EXK4_METCM) HSP 1 Score: 84.3 bits (207), Expect = 8.030e-17 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 34 EPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETF 291 EPNNR+ AS E +QW++A + E L+ N+ W VKRP D+ V+ + ++KR +G NGE+ +HK R V +GF QI GL + ET+ Sbjct: 112 EPNNRKSALASAEREQWEQAMQEEYNSLMENQTWRVVKRPADRKVLTGRWVFKRKLGSNGEVARHKARFVVRGFSQIYGLDFDETY 197
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A2S7YPY4_BEABA (Uncharacterized protein n=1 Tax=Beauveria bassiana TaxID=176275 RepID=A0A2S7YPY4_BEABA) HSP 1 Score: 84.0 bits (206), Expect = 1.160e-16 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 34 EPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETF 291 EPNNR+ AS E +QW++A + E LI N+ W V+RP D+ V+ + ++KR +G NGE+ +HK R V +GF QI GL + ET+ Sbjct: 1635 EPNNRKSALASAEREQWEQAMQEEYNSLIENQTWRVVERPADRKVLTGRWVFKRKLGSNGEVARHKARFVVRGFSQIYGLDFDETY 1720
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A075B0V5_ROZAC (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B0V5_ROZAC) HSP 1 Score: 81.6 bits (200), Expect = 7.110e-16 Identity = 33/73 (45.21%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 79 QWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETFPP 297 +W++A +AE L+ N W+ ++ P D+ +G+K ++K E GE+EK+K RLVAQGF+Q+KG+ Y+ETF P Sbjct: 113 EWRKAMQAEYNALMSNGTWELMELPPDRKAIGSKWVFKTKYNERGEVEKYKARLVAQGFKQVKGVDYEETFSP 185
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A177U0P2_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177U0P2_9BASI) HSP 1 Score: 81.6 bits (200), Expect = 7.370e-16 Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 13 SASYLPVEPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETFPP 297 SA + +EP R+E Q +W QW+ AE ++ L + W +V P D+ +G + +YK + E+G ++HK RLVAQGF QI G Y ETF P Sbjct: 696 SADGVVLEPATRKEAQRRGDWAQWEAAEMGQLAALEQFGTWVEVALPKDRQAIGCRWVYKLKLNEDGNADRHKARLVAQGFSQIPGQDYTETFAP 790
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A2Z6P936_TRISU (Integrase catalytic domain-containing protein n=2 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P936_TRISU) HSP 1 Score: 81.3 bits (199), Expect = 1.010e-15 Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 31 VEPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETFPPKSH 306 +EP N +E + W A + E+G RN++WD V RP++ V+GTK +YK ENG + ++K RLVAQG+ QI+G+ + ETF P +H Sbjct: 936 IEPRNVKEALTDE---YWINAMQEELGQFKRNEVWDLVPRPENVNVIGTKWVYKNKSDENGNVTRNKARLVAQGYAQIEGVDFDETFAPVAH 1024
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A2Z6P121_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P121_TRISU) HSP 1 Score: 80.5 bits (197), Expect = 1.870e-15 Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 31 VEPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETFPP 297 +EP N +E A + W A + E+G RN++WD V RP++ V+GTK +YK ENG + ++K RLVAQG+ QI+G+ + ETF P Sbjct: 1008 IEPRNVKEALADE---YWINAMQEELGQFKRNEVWDLVPRPENVNVIGTKWVYKNKSDENGNITRNKARLVAQGYAQIEGVDFDETFAP 1093
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A4S4LPF2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LPF2_9AGAM) HSP 1 Score: 79.0 bits (193), Expect = 6.400e-15 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 34 EPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETFPP 297 EP N E + +W W+ A + E+G + + W+ V RP D VVG+K ++K G +GE+ K+K RLVAQGF Q+ G+ Y +TF P Sbjct: 347 EPRNVTEARRGSDWSHWEAAMKTELGMIEKLGTWELVDRPSDANVVGSKWVFKIKRGADGEIIKYKARLVAQGFTQVPGIDYSDTFAP 434
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A177TF55_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TF55_9BASI) HSP 1 Score: 79.0 bits (193), Expect = 6.520e-15 Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 13 SASYLPVEPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETFPP 297 SA +EP + RE Q Q+W +WK+A + ++ L WD ++ P D+ +G++ +YK + ENG + K RLVAQGF Q++G+ + ETF P Sbjct: 711 SADGEELEPVSYREAQQRQDWPKWKQAMDEQLKALDGMHTWDVMELPPDRKAIGSRWVYKLKLDENGNAARWKARLVAQGFTQVEGIDFTETFAP 805
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Match: A0A5N6LDC3_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LDC3_9ASTR) HSP 1 Score: 78.2 bits (191), Expect = 1.180e-14 Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 79 QWKRAEEAEMGGLIRNKMWDQVKRPDDKLVVGTKTIYKRTIGENGELEKHKCRLVAQGFRQIKGLHYQETFPP 297 +WK+A + E+ + +N WD + P++K +VG K +YK +G+NGE+ KHK RL+A+G+ Q KG+ + +TF P Sbjct: 191 EWKKAMKEEISSIEKNGTWDLIDAPENKNIVGLKWLYKTKVGKNGEIVKHKARLMAKGYSQQKGIDFHDTFAP 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12907.1824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12907.1824.1 >prot_H-paniculata_contig12907.1824.1 ID=prot_H-paniculata_contig12907.1824.1|Name=mRNA_H-paniculata_contig12907.1824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp MPKGSASYLPVEPNNRRETQASQEWKQWKRAEEAEMGGLIRNKMWDQVKRback to top mRNA from alignment at H-paniculata_contig12907:193..507- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12907.1824.1 ID=mRNA_H-paniculata_contig12907.1824.1|Name=mRNA_H-paniculata_contig12907.1824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=315bp|location=Sequence derived from alignment at H-paniculata_contig12907:193..507- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12907:193..507- >mRNA_H-paniculata_contig12907.1824.1 ID=mRNA_H-paniculata_contig12907.1824.1|Name=mRNA_H-paniculata_contig12907.1824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at H-paniculata_contig12907:193..507- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |