mRNA_H-paniculata_contig129.1815.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig129.1815.1
Unique NamemRNA_H-paniculata_contig129.1815.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI)

HSP 1 Score: 797 bits (2059), Expect = 3.480e-274
Identity = 407/561 (72.55%), Postives = 464/561 (82.71%), Query Frame = 1
Query:    1 KIGDWVVAAELFVKSGEPLRAAEITCKGRGAGWQETLAEIVRSVPKSEVKVLSLCGQELSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEEHAGKFDNSVFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEAYAAAEDPRSRYNAE*RTEAWSLGKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGDGEPPRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPALWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPK-----DGHGNRKYHG-LAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTPKQG-----RRRKRGGGAKWREAKEGDADVMVPGDDDEDMATDFDQED--VAGDEVFNRCINDTLEAQEESSEYTITVVPARCLRGLKREEVFRIRPGTCGPRARFYKNMMPDIPLALSQPCGRFFHEEDFEFEFLREGKCPFSRVKDMGDYGSC 1644
            ++GDW VA+ELF+KSGEPLRAAEIT KGRG GWQ+ LAEIVRSV K+E K+LS+CG+ELSLAGFD LA+EAY+KMDDF+NVM LYVK QNW+EAVKLSEEH  K+D++VFLPYALWLRDKGRFDEAL AF +AGRRDLS  MTE+LILN+V K RF DASYYYWRS+TEA+AAAE  +++ + +   +A  + +EHS LADLYHAFHHV+SFTTDPFT LQPEVLLQ S      RFLVNSLG+ EPPRGISRAHTLYTLAKQAKVLGAFKLARF YDRLQRQRVP LWQDQIDLDMLTVQAKPVRDSP+LFAACFRCGASNPLLSP+T A  + S G +L K     DG G  ++   L WGDACTTCRHPFVRSFFNFE+LPLVEFQP+PG++DE+ALE+IT +P QG     R+ +  GG +W EAKEGDADVM  G DDE    D D E   V G+E+FNRCIN TLEAQE+SSEY + V  A+CLR LKRE+VFR+ PGT  PRAR YKNMMPDIPLALSQPCGRFFHEEDFEF +LRE +CPFSRV D+GDYGSC
Sbjct:  785 EVGDWSVASELFLKSGEPLRAAEITIKGRGEGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKHQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQLILNSVAKARFDDASYYYWRSSTEAFAAAEKDKTKTSEKDIRKAQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVS------RFLVNSLGEAEPPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRVPPLWQDQIDLDMLTVQAKPVRDSPELFAACFRCGASNPLLSPYTGA--SNSLGSTLSKMPRRTDGGGRGRHDAPLPWGDACTTCRHPFVRSFFNFESLPLVEFQPDPGLTDEEALELITASPPQGGRGRGRKARHRGGNQWHEAKEGDADVMALGSDDEGANDDDDLEGNYVPGEELFNRCINRTLEAQEDSSEYMVVVASAKCLRALKREDVFRVPPGTRSPRARLYKNMMPDIPLALSQPCGRFFHEEDFEFSYLRESRCPFSRVTDVGDYGSC 1337          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: F0XY87_AURAN (Intraflagellar transport protein 122 homolog n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY87_AURAN)

HSP 1 Score: 464 bits (1193), Expect = 4.350e-146
Identity = 260/557 (46.68%), Postives = 349/557 (62.66%), Query Frame = 1
Query:    1 KIGDWVVAAELFVKSGEPLRAAEITCKGRGAGWQETLAEIVRSVPKSEVKVLSLCGQELSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEE--------HAGKFDNSVFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEA-YAAAEDPRSRYNAE*RTEAWSLGKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGDGEPPRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPALWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGHGNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTPKQGRRRKRGGGAKWREAKEGDADVMVPGDDDEDMATDFDQEDVAGDEVFNRCINDTLEAQEESSEYTITVVPARCLRGLKREEVFRIRPGTCGPRARFYKNMMPDIPLALSQPCGRFFHEEDFEFEFLREGKCPFSRVKDMGDYGSC 1644
            ++ DW  AA+++V +G+ +RA ++  + +   W E +A I RSV   +V  L  C +    AG D+LARE Y K+DD   ++ LYV+ Q WAEA+KL+E+        H  KFD +++LPYA WL    RFDEAL A+ K+GR D+++ M E+L  NAV ++RF DA+YYYW  A+E  + A+ +            A+S      H ADLY+A++ + SF   PFT LQPEVL Q     CA RFLVN LG  E P GIS+   L+ LAKQAK LGA+KLARF YD+LQ  +VP  WQ+Q+D+DMLT+ +KPVRD+P+L   C+RCGA+N LL+P T A    +  G                  D CT+C HPFVRSF NFE LPLVEF PE  + D++ALE+I + P +  R +R    +W E+KEG+A+VM  G DD D   D D ED     +FN+CI+ TL  QE  + Y    V A  LR L+RE VF+ +P   G RA +YK+ + D+ +A+SQ C RFFHEEDFEF+ LR+G CPFSRVKD+GD+G C
Sbjct:  745 EVEDWAAAADMYVSAGDAMRAVKLLGEHQQGNWTEQMAAIARSVTGEDV--LRQCARCFLAAGEDALAREVYAKLDDVEALLQLYVRKQQWAEAIKLAEDASAKFSNAHRAKFDQTLYLPYAEWLALHDRFDEALEAYRKSGRPDMAQHMMEQLTCNAVVESRFKDAAYYYWLLASETLHVASGESGDDVAVAKIMPAYSA---QLHKADLYYAYNFIESFFL-PFTPLQPEVLFQ-----CA-RFLVNGLGAREAPHGISKVKILFALAKQAKHLGAYKLARFAYDKLQHMKVPDEWQEQLDVDMLTIHSKPVRDNPELLPVCYRCGAANALLNPATNAATLSNKVGDERSR-------------DVCTSCGHPFVRSFLNFEILPLVEFIPEAPLGDDEALELIREAPPETGRDRRKLRGQWNESKEGEANVMSMGGDD-DAYDDDDAED-----LFNKCIHRTLSNQEGVNSYAPVTVDAETLRSLRREHVFQCKPRAPGMRATYYKSAIADVHIAISQSCHRFFHEEDFEFQVLRDGACPFSRVKDVGDFGPC 1270          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: A0A812QAW2_SYMMI (Ift122 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QAW2_SYMMI)

HSP 1 Score: 437 bits (1125), Expect = 1.020e-144
Identity = 249/532 (46.80%), Postives = 327/532 (61.47%), Query Frame = 1
Query:   94 GWQETLAEIVRSVPKSEVKVLSLCGQELSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEEHAGKFDNSVFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEAYAAAEDPRSRYNAE*RTEAWSLGKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGD-GEPPRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPALWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGHGNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTPKQGR--RRKRGGGAK--WREAKEGDADVMVPGDDDEDMATDFDQEDVAG---------DEVFNRCINDTLEAQEESSEYT-ITVVPARCLRGLKREEVFRIRPGTCGPRARFYKNMMPDI-PLALSQPCGRFFHEEDFEFEFLREGKCPFSRVKDMGDYGS 1641
            GWQ  L ++VR+ P     VL+ CG+ L+    D+LAREAY K+ D + +M L+VK Q W EA KL++E+ GKFD+SVFLPYA WL  + R ++A+ A+ KAGR+DL+R + E L LNAV +TRF DASYYYW  A +     E   S Y             E  H ADLY+A+  + S+ TDPFTS  PE+L Q S      RF++NSLG  G  P GIS+A TLYTLA+Q+ +L A+KLAR  YDRL + ++P+ WQD+++ DML VQAKPVRD+PD   +C+RC ++NPLL+PFT   A                       GD CT C HPFVRSF NF+ LPLVEF PEP I+DE+A+E+I  +P   R  R   G  +K  W E K G AD+M  G      + D + EDV G         +E+F  C+N TLE Q  +  Y  +TV     L+G+KR EVF  RP +   RA FY+NM+P++  +A+SQ C RFFH EDFEF +L    CPFSR+ D+G+YGS
Sbjct:   19 GWQLALIDVVRATPTDVRDVLAFCGEILTQHNEDALAREAYTKLGDVNKLMALFVKRQMWVEAAKLADENEGKFDSSVFLPYAEWLIIQDRCEDAIQAYNKAGRQDLARKILEELTLNAVVETRFKDASYYYWLLAKDI---REGTDSNYQL-----------ECEHNADLYYAYSSIQSYVTDPFTSQSPELLFQVS------RFIINSLGSSGSIPYGISKAATLYTLARQSMILEAYKLARHSYDRLNKLQIPSRWQDEVERDMLIVQAKPVRDNPDQLPSCYRCSSTNPLLNPFTNKFAK----------------------GDVCTNCGHPFVRSFINFDILPLVEFVPEPSITDEEAVELIRTSPGAARSPRATNGESSKSGWNEGKVGHADMMTFG------SVDSNGEDVMGPGSMTSGPSEELFANCLNKTLENQMNAMSYIPVTVDTVTLLQGMKRSEVFVCRPSSPEKRATFYRNMLPEVVEIAISQSCHRFFHLEDFEFSYLSNKSCPFSRLNDVGEYGS 502          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: A0A8J2WGR4_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WGR4_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 1.410e-132
Identity = 249/554 (44.95%), Postives = 329/554 (59.39%), Query Frame = 1
Query:   10 DWVVAAELFVKSGEPLRAAEITCKGRGAGWQETLAEIVRSVPKSEVKVLSLCGQELSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEEHAG--------KFDNSVFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEAY--AAAEDPRSRYNAE*RTEAWSLGKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGDGEPPRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPALWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGHGNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTPKQGRRRKRGGGAKWREAKEGDADVMVPGDDDEDMATDFDQEDVAGDEVFNRCINDTLEAQEESSEYTITVVPARCLRGLKREEVFRIRPGTCGPRARFYKNMMPDIPLALSQPCGRFFHEEDFEFEFLREGKCPFSRVKDMGDYGS 1641
            DW  AA+L V +G  L+A  +  + +  GW E L+ IVR V   +V  L  C +     G D  A+E Y+K+DD  +++ LYV+ Q+W  A+KL+E+ +G        KFD +++LPYA WL    RFDEAL A+ K+GR D +  M + L  NAV ++RF DASYYYW  A+E    AA +D   +          S   E  H ADLY+A+ HV  F   P+T L+PEVL Q     CA RFL+N LG  E P GISRA  LYTLAKQAK  GAFKLAR+ YD+L R ++P  W+D++D++ LT+ A P+RD  DL   C+RCGASN LL+P     ++ S G S+ +D               CT+C HPFVRSF NFE LPL+EF PE  ISDE+AL++I + P+     K  G  K       +ADV+   DDDED               F R INDTL+AQ  + EY    V A  LR L R EVF  +P   G RA +YK+ +PD+ +ALSQ C RFFHE+DFE+  L+EG+CP+SR KD+GD+G+
Sbjct:  735 DWSAAADLQVSAGNALQAVRLLHEHKPDGWIEKLSLIVRQVTAEDV--LRQCARAFLANGDDERAKEVYVKLDDVESLLGLYVRKQDWEAALKLAEDPSGTFSEETRAKFDEALYLPYAEWLAVHDRFDEALEAYRKSGREDRAARMVQELTFNAVVESRFKDASYYYWLLASETLRVAAKKDNLQK--------VMSTYTEQLHRADLYYAYAHVEDFFL-PYTPLRPEVLFQ-----CA-RFLINGLGGKEAPFGISRAKILYTLAKQAKTCGAFKLARYAYDKLLRMKLPDAWRDEVDVEALTIHAAPLRDKSDLLPVCYRCGASNALLNP----ASSHSQGSSVHRD--------------VCTSCGHPFVRSFLNFEVLPLIEFVPEASISDEEALDLIKEFPED----KNSGEGK-------EADVVFDDDDDEDR--------------FTRAINDTLQAQAGADEYKPVTVDAETLRSLYRAEVFCCKPRQQGLRATYYKSAIPDVHMALSQSCHRFFHEDDFEYAVLKEGRCPYSRAKDVGDFGT 1228          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: A0A835ZL39_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL39_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 1.680e-121
Identity = 240/570 (42.11%), Postives = 311/570 (54.56%), Query Frame = 1
Query:   10 DWVVAAELFVKSGEPLRAAEITCKGRGA--GWQETLAEIVRSVPKSEVKVLSLCGQELSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEEHAGKFDNSVFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEAYAAAED-PRSRYNAE*RTEAWSLGKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGDGEPPRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPALWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGHGNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTPKQGRRRKRGGGAK-WREAKEGDADVMVPGDDDEDMATDFDQEDV----AGDEVFNRCINDTLEAQEESS-----------------EYTITVVPARCLRGLKREEVFRIRPGTCGPRARFYKNMMPDIPLALSQPCGRFFHEEDFEFEFLREGKCPFSRVKDMGDYGSC 1644
            DW  AA++++ +G+ + AA I+ +      GWQ  L E              LCG     AG   LA E   K++D+S +M L+V+ Q+W  AVKLSEEHAGKFD  VFLPYA WL   GR+D+AL A+ +AGR DLS     +LI  +    R+ DA++Y+W SA E     +   RS ++ E R  A++  + HS  ADLY+AF+HV                         SR+L+N LG  EPP GISR HTLYTLAKQAK LGA+KLAR   + LQR R+PA WQ Q+D+DML++QA+PVRD  +L   C+RCG+S+PLLS                              GD C +C+HPFVRSF  FE LPLVEF+P  GISDEDAL MI   P   + R++GG A  W+E+K   ADVM   DD+ +                 + FN CIN  L+ QE  S                  Y + V  AR L  L+R +V  + P       RF++NMM DI +A    C RFFHE+DFEF  LR+ +CPF R  D+GDYGSC
Sbjct:  756 DWRGAADMYLSAGDGMSAATISTRDAKTREGWQTVLIE--------------LCGDTFVAAGEHELALEVLSKLEDYSALMALHVQRQDWVAAVKLSEEHAGKFDQKVFLPYAEWLAATGRYDDALDAYRRAGRADLSLRTLRQLIETSAVMQRYKDAAHYHWLSAREVLGGLKGGARSGWDQEERA-AYAAYEAHSLKADLYYAFYHV-------------------------SRYLINILGTEEPPEGISRVHTLYTLAKQAKSLGAYKLARSALELLQRHRIPAAWQGQVDMDMLSIQARPVRDPQELLPVCYRCGSSSPLLST--------------------------RGEGDTCASCKHPFVRSFLTFEVLPLVEFRPADGISDEDALGMIRARPHDPKFRRKGGNANPWQESKVNGADVMNLADDNGNXXXXXXXXXXXXXXGSSDPFNACINAALDRQEAGSGXXXXXXXXXXXXXXXXXYAMVVADARALARLRRSDVHYVAPPPPLRTGRFFRNMMADIAVAACPACARFFHEDDFEFAVLRDRQCPFCRASDVGDYGSC 1259          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: A0A7S3NI59_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI59_9STRA)

HSP 1 Score: 374 bits (959), Expect = 7.480e-112
Identity = 237/557 (42.55%), Postives = 320/557 (57.45%), Query Frame = 1
Query:   10 DWVVAAELFVKSGEPLRAAEITCKGRGAG-------WQETLAEIVRSVPKSEVKVLSLCGQELSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEEHAGKFDNS-VFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEAYAAAEDPRSRYNAE*RTEAWSLGKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGDGEPPRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPA-LWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGHGNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTPKQGRRRKRGGGAKWREAKEGDADVMVPGDDDEDMATDFDQEDVAG-DEVFNRCINDTLEAQEESSEYTITVVPARCLRGLKREEVFRIRPGTCGPRARFYKNMMPDIPLALSQPCGRFFHEEDFEFEFLREGKCPFSRVK--DMGDYGSC 1644
            DW  AAE++V SG+P+R   +  +  G         W E LA++ R++  +  +VL  C      A  D LA E Y K+ D  +++ L+V+ + W EA+ L+E++ G  D S ++ PYA WL    RFDEAL A+ K+G+ D ++ M ++L LNAV ++RF DA YYYW  ATE    A    S  +   RT A    ++    AD+Y+A++ + SF   PFT  QPE L  A+      RFL+N LG+ + P GISRA  LYTLA QAK LGAFKLARF YD+LQ  ++P  L  D ++LD+L ++AKP+RD+PDL   C+RCGASNPLL+P     AA    G+     HG   Y G    D CT+C HPFVRSF +F+ LPLVEF PE GI D  AL++I + P   R       A+ R          V             +E +A  D++FN+CI   L      S   +TV     LR L+RE+V+  +P     RA FY N +PD+ LA+S    RFFHEEDFEF+ LR+G+CPFSRVK  D+GD G C
Sbjct:  821 DWAAAAEMYVSSGDPMRGVRLLGEHLGGNSTEIDPTWLEQLAQLARTITGAP-EVLKQCATYFEQADRDDLALETYRKLGDIKSLVALHVRKERWHEAITLAEQNPGLVDLSGLYTPYAEWLALADRFDEALDAYRKSGKPDQAQHMMQQLTLNAVVESRFKDAGYYYWLLATECLKVASLQSSNDDHALRT-ALPQYRDRLRNADIYYAYNLIDSFFL-PFTPTQPEALFNAA------RFLINRLGNTDAPAGISRAKILYTLATQAKHLGAFKLARFAYDKLQHMKLPEDLDLDTLELDILAIRAKPLRDNPDLLPVCYRCGASNPLLNP-----AAHRHSGT-----HGTSTYCGGH--DICTSCGHPFVRSFLDFDILPLVEFVPESGIDDNTALDLIREPPP--RTTPTTATARLRSKIHDXXXXXVAS-----------REGLASSDDLFNKCIQKNLANSSSDSSIPVTV-DTDTLRSLRREQVYVCKPIAPQMRATFYFNSLPDVHLAISH--HRFFHEEDFEFDVLRQGRCPFSRVKAQDLGDTGPC 1340          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: A0A7S4D6V4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6V4_HETAK)

HSP 1 Score: 337 bits (864), Expect = 5.250e-108
Identity = 186/347 (53.60%), Postives = 232/347 (66.86%), Query Frame = 1
Query:  175 LSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEEHAGKFDNSVFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEAYAAAEDPRSRYNAE*----RTEAWSLGKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGDGEPPRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPALWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGHGNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTP 1203
            +S  G D  A+E YLK+ D S +M +YV+ Q+W  AV LSEEHAGKFD SVFLPYA WL    RFDEALGA+ KAGR D S+ +  +L  NAV + RF DA+YYY+    E   AAE        E     R +A +    ++ LA+LY A+ H+YSFTTDPFT+LQPE+L Q S      R+++N +G  + P GISR +TLYTLAKQAK LGA+KLARF YDRL   RVP  W+DQ+DLDMLTVQAKPVRD+P++   C+RCGASNPLL+P   A AA +SG S            G   GD+CT C HPFVRSF +FE LPLVEF+ +P +S E+AL++I   P
Sbjct:    1 MSGVGADLAAKEVYLKLGDVSALMAIYVRRQDWEAAVALSEEHAGKFDRSVFLPYAEWLALNVRFDEALGAYRKAGRPDQSQKLMSQLTDNAVMEGRFKDAAYYYYLLGAECLRAAEVLGEAKGGELSEAARKKALAEYDNYNKLANLYFAYQHIYSFTTDPFTNLQPEMLFQVS------RYVLNLMGAEDAPYGISRVNTLYTLAKQAKNLGAYKLARFAYDRLNLMRVPPAWRDQLDLDMLTVQAKPVRDTPEILPVCYRCGASNPLLAP--AANAASASGHS------------GQDKGDSCTNCGHPFVRSFLSFEVLPLVEFRADPALSYEEALDLIRQPP 327          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: A0A7S2RZW4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZW4_9STRA)

HSP 1 Score: 322 bits (824), Expect = 1.680e-97
Identity = 230/629 (36.57%), Postives = 310/629 (49.28%), Query Frame = 1
Query:    1 KIGDWVVAAELFVKSGEPLRAAEITCKGRGAGWQETLAEIVR--SVPKSEVKVLSLCGQELSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEEHA--GKFDNSVFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEAY--------------AAAEDPRSRYNAE*R--TEAWSL---GKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGDGEP---PRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPALWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGHGNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTPKQGRRRKRGGGAKWREAKEGDADVMVPGDDDEDMATDFDQEDVAG-----DEVFNRCINDTL--------EAQEES--------SEYTITVVPARCLRGLKREEVFRIRPG-----------------------------TCGPRA----RFYKNMMPDI-PLALSQPCGRFFHEEDFEFEFLREGKCPFSRVK--DMGDYG 1638
            ++GDW  AAE+++ SG+  +A  +    + AGW + +  I R  S        L  C + L+  G D+ A+  Y+K+D    +M LY++   W EAV L+++ A  GKFD S+F+PYA WL  + RFDEAL AF +AGR D SR M E L  NAV + RF DA+YYY   A E                A  E+ +   + E    +E  ++    +++ H AD+Y A+ H+ +    PFT  QPE     S       FL+N+L        P GIS    L TLA  AK LGAFKLAR+ YDRL    +P   +++I+LDMLT+QAKPVRD  DL  AC+  G +NPLL+PF T                          GD    C HPF+RSF +FE LPLVEF P PGI+DEDA+E+I   PK+G RR+  G                 G  D D+  D   E + G      + F+  +N  L        EA+  S         EY   V  A  L  L+R+E+F +RP                              + G R     RF++NM+PD  P+ALSQP GRFF EE+FE   L++G CP SRV    + DYG
Sbjct:  104 EVGDWSKAAEMYMSSGDAAKAVALLGDKQPAGWAQQMTSIARDLSTAAGNRATLMSCAKFLAGGGEDNAAKAVYIKLDAVDELMALYIRRHRWPEAVALADDPANRGKFDASMFIPYAEWLAAEHRFDEALAAFRRAGRPDESRRMLEHLTFNAVLERRFKDAAYYYTLMAAECLKREGSGSGLSRNEEAKGEEAKHSSSIESLPPSEVQAILPRYRDYLHRADIYAAYQHIENLY-QPFTLAQPEANFHVSL------FLINTLSSRASQVIPHGISMLRILSTLASNAKHLGAFKLARYAYDRLLMLALPEKDREKIELDMLTIQAKPVRDHQDLLPACYLSGITNPLLNPFLT--------------------------GDVSINCGHPFIRSFISFEVLPLVEFVPAPGITDEDAIELIRTPPKEGVRRRIPG--------------STHGPSDGDLEDDPTFEAIKGGGGEGSDHFSDAVNKALAIFEGHSQEAKTSSRPTEKSQQGEYVPVVCSADALLSLRRDEIFCLRPRVEMALHQHPRKEELLSQYDTSNASGAVTYSAGGRGVQYCRFFRNMLPDTCPIALSQPAGRFFLEEEFELSLLKDGCCPLSRVPVDKLPDYG 685          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: A0A6H5KUR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR3_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 1.520e-96
Identity = 164/262 (62.60%), Postives = 190/262 (72.52%), Query Frame = 1
Query:  889 MLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPK-----DGHGNRKYHG-LAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPG--ISDEDALEMITDTPKQGRRRKRGGGAKWREAKEGDADVMVPGDDDEDMATDFDQED--VAGDEVFNRCINDTLEAQEESSEYTITVVPARCLRGLKREEVFRIRPGTCGPRARFYKNMMPDIPLALSQPCGRFFHEEDFEFEFLREGKCPFSRVKDMGDYGSC 1644
            M  + AKPVRDSP+LFAACFRCGASNPLLSP+T A  + S G SL K     DG G  ++     WGDACTTCRHPFVRS FNFE+LPLVEFQP+PG  + + +   ++ +              +W EAKEGDADVM  G DDE  A D D E   V G+E+FNRCIN TLEAQE+S+EY + V  A+CLR LKRE+VFR+ PGT  PRAR YKNMMPDIPLALSQPCGRFFHEEDFEF +LRE +CPFSRV D+GDYGSC
Sbjct:    7 MQKLSAKPVRDSPELFAACFRCGASNPLLSPYTGA--SNSLGSSLSKMSRRTDGGGRGRHDAPFPWGDACTTCRHPFVRSSFNFESLPLVEFQPDPGEDVEEGEKPAIVVEM------------WQWHEAKEGDADVMALGSDDE-GADDDDLEGSYVPGEELFNRCINRTLEAQEDSNEYMVVVASAKCLRALKREDVFRVPPGTRSPRARLYKNMMPDIPLALSQPCGRFFHEEDFEFSYLRESRCPFSRVTDVGDYGSC 253          
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Match: A0A024TKF9_9STRA (Intraflagellar transport protein 122 homolog n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKF9_9STRA)

HSP 1 Score: 329 bits (844), Expect = 3.330e-96
Identity = 204/554 (36.82%), Postives = 304/554 (54.87%), Query Frame = 1
Query:    4 IGDWVVAAELFVKSGEPLRAAEITCKGRGA-GWQETLAEIVRSVPKSEVKVLSLCGQELSLAGFDSLAREAYLKMDDFSNVMMLYVKSQNWAEAVKLSEEHAGKFDN--SVFLPYALWLRDKGRFDEALGAFLKAGRRDLSRLMTERLILNAVTKTRFSDASYYYWRSATEAYA--AAEDPRSRYNAE*RTEAWSLGKEHSHLADLYHAFHHVYSFTTDPFTSLQPEVLLQASSPLCASRFLVNSLGD----GEPPRGISRAHTLYTLAKQAKVLGAFKLARFGYDRLQRQRVPALWQDQIDLDMLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGHGNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEMITDTPKQGRRRKRGGGAKWREAKEGDADVMVPGDDDEDMATDFDQED----VAGDEVFNRCINDTLEAQEESSEYTITVVPARCLRGLKREEVFRIRPGTCGPRARFYKNMMPDIPLALSQPCGRFFHEEDFEFEFLREGKCPFSRVKDM 1626
            + DW  A E+++ SG   +A +I     GA GW   L E+V+  P  + KVLS+C + L  AG     R+ YLK+ DF  +M +++  Q+W EAV+L+++H  K  N   V++PYA WL  + R+++AL A+  A R D    + E+L+ +AV +TRF DASY++WR   E  A  AA  P +   ++      +L  EH   AD+Y A+  ++++T +PFT+L PE L  AS      +FL+N+L        PP G+S A  ++TLA+ A+ L AFKLAR  Y+RL + RV   WQ+ +D+  +T+Q KP  D  +L    +R   +NPLL+P  T                          GD C    HPFVRSF +F+ LPLVEFQP P ++DE+A+ ++   P  G       G  W+    G+   M  GDD      D D  D    ++G ++F + +N   +A    + Y +  + A+ L  LK  EVF +R  T   R +FYKNM+PDI + LS  C +FFHE+DFEFE+LR+G C + R+ ++
Sbjct:  714 VHDWRAATEMYLASGNVPKAVQIM----GARGWFNDLMEVVQR-PDCDPKVLSMCAEYLLHAGKFKQCRDVYLKIGDFDALMKMHLACQDWEEAVRLAQKHKDKIQNVADVYVPYAEWLASQDRYEDALAAYTSARRPDQCIKLLEQLVASAVVETRFKDASYFHWRLCDELLACVAATSPDATTESDKAKIRAAL--EHETCADVYFAYSVIFAYTDEPFTTLLPETLFHAS------QFLLNTLSAKAMAAAPPPGVSVARVVFTLAQHAQQLEAFKLARQMYERLHQMRVRPEWQNTVDVTSMTLQTKPYSDRDELLPIDYRSSTTNPLLNPNGT--------------------------GDVCVHTGHPFVRSFASFDTLPLVEFQPTPDLTDEEAIALLEVLPSVGDNNDSSAGDPWKTTDTGNMQSMRLGDD-----NDPDHADKPVVLSGSQMFEKALN--RQAIARGAGYKVLQIDAKILAALKPNEVFVVRYPTKALRCKFYKNMIPDIKVHLSPACRKFFHEDDFEFEYLRDGACAYCRLPEL 1221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig129.1815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW9_ECTSI3.480e-27472.55Intraflagellar transport protein 122 homolog n=1 T... [more]
F0XY87_AURAN4.350e-14646.68Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A812QAW2_SYMMI1.020e-14446.80Ift122 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A8J2WGR4_9STRA1.410e-13244.95Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A835ZL39_9STRA1.680e-12142.11Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A7S3NI59_9STRA7.480e-11242.55Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A7S4D6V4_HETAK5.250e-10853.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2RZW4_9STRA1.680e-9736.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5KUR3_9PHAE1.520e-9662.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024TKF9_9STRA3.330e-9636.82Intraflagellar transport protein 122 homolog n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig129contigH-paniculata_contig129:297..6871 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.9
Seed ortholog evalue1.5e-95
Seed eggNOG ortholog2880.D7FXW9
Preferred nameIFT122
KEGG koko:K16547,ko:K19656
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0003002,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007227,GO:0007275,GO:0007389,GO:0007399,GO:0007417,GO:0007423,GO:0007507,GO:0008104,GO:0008150,GO:0008285,GO:0008589,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009953,GO:0009966,GO:0009968,GO:0009987,GO:0010171,GO:0010172,GO:0010646,GO:0010648,GO:0010970,GO:0014020,GO:0015630,GO:0016043,GO:0016331,GO:0021510,GO:0021511,GO:0021513,GO:0021532,GO:0021904,GO:0021914,GO:0021915,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030031,GO:0030326,GO:0030705,GO:0030990,GO:0030991,GO:0031503,GO:0031974,GO:0031981,GO:0032391,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035115,GO:0035136,GO:0035148,GO:0035239,GO:0035295,GO:0035556,GO:0035720,GO:0035721,GO:0035735,GO:0035869,GO:0036064,GO:0042073,GO:0042127,GO:0042733,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043113,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045184,GO:0045879,GO:0046626,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048568,GO:0048580,GO:0048582,GO:0048583,GO:0048585,GO:0048592,GO:0048593,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048736,GO:0048856,GO:0050678,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051641,GO:0051649,GO:0051668,GO:0051716,GO:0051960,GO:0051961,GO:0060173,GO:0060271,GO:0060429,GO:0060562,GO:0060606,GO:0060830,GO:0060831,GO:0060971,GO:0060972,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061512,GO:0065007,GO:0070013,GO:0070727,GO:0070925,GO:0071840,GO:0072175,GO:0072359,GO:0072594,GO:0072657,GO:0090596,GO:0097458,GO:0097499,GO:0097500,GO:0097542,GO:0097546,GO:0097730,GO:0097731,GO:0097733,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1900076,GO:1903441,GO:1905515,GO:1990778,GO:2000026
EggNOG free text desc.ciliary receptor clustering involved in smoothened signaling pathway
EggNOG OGsCOG2319@1,KOG1538@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Exons11
Model size1834
Cds size759
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929015.3306596-UTR-H-paniculata_contig129:296..4211622929015.3306596-UTR-H-paniculata_contig129:296..421Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 297..421 +
1691480699.8671784-UTR-H-paniculata_contig129:296..4211691480699.8671784-UTR-H-paniculata_contig129:296..421Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 297..421 +
1622929015.3471148-UTR-H-paniculata_contig129:1046..11881622929015.3471148-UTR-H-paniculata_contig129:1046..1188Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 1047..1188 +
1691480699.8773358-UTR-H-paniculata_contig129:1046..11881691480699.8773358-UTR-H-paniculata_contig129:1046..1188Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 1047..1188 +
1622929015.3602338-UTR-H-paniculata_contig129:1821..19941622929015.3602338-UTR-H-paniculata_contig129:1821..1994Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 1822..1994 +
1691480699.8854854-UTR-H-paniculata_contig129:1821..19941691480699.8854854-UTR-H-paniculata_contig129:1821..1994Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 1822..1994 +
1622929015.3757865-UTR-H-paniculata_contig129:2372..24851622929015.3757865-UTR-H-paniculata_contig129:2372..2485Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 2373..2485 +
1691480699.893613-UTR-H-paniculata_contig129:2372..24851691480699.893613-UTR-H-paniculata_contig129:2372..2485Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 2373..2485 +
1622929015.396526-UTR-H-paniculata_contig129:2981..31271622929015.396526-UTR-H-paniculata_contig129:2981..3127Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 2982..3127 +
1691480699.9018166-UTR-H-paniculata_contig129:2981..31271691480699.9018166-UTR-H-paniculata_contig129:2981..3127Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 2982..3127 +
1622929015.4136925-UTR-H-paniculata_contig129:3681..37711622929015.4136925-UTR-H-paniculata_contig129:3681..3771Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 3682..3771 +
1691480699.9098928-UTR-H-paniculata_contig129:3681..37711691480699.9098928-UTR-H-paniculata_contig129:3681..3771Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 3682..3771 +
1622929015.4298-UTR-H-paniculata_contig129:4146..42451622929015.4298-UTR-H-paniculata_contig129:4146..4245Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 4147..4245 +
1691480699.9201038-UTR-H-paniculata_contig129:4146..42451691480699.9201038-UTR-H-paniculata_contig129:4146..4245Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 4147..4245 +
1622929015.5924263-UTR-H-paniculata_contig129:6684..68711622929015.5924263-UTR-H-paniculata_contig129:6684..6871Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 6685..6871 +
1691480699.983907-UTR-H-paniculata_contig129:6684..68711691480699.983907-UTR-H-paniculata_contig129:6684..6871Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig129 6685..6871 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929015.4416234-CDS-H-paniculata_contig129:4245..42601622929015.4416234-CDS-H-paniculata_contig129:4245..4260Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 4246..4260 +
1691480699.9319272-CDS-H-paniculata_contig129:4245..42601691480699.9319272-CDS-H-paniculata_contig129:4245..4260Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 4246..4260 +
1622929015.461663-CDS-H-paniculata_contig129:4669..49261622929015.461663-CDS-H-paniculata_contig129:4669..4926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 4670..4926 +
1691480699.943508-CDS-H-paniculata_contig129:4669..49261691480699.943508-CDS-H-paniculata_contig129:4669..4926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 4670..4926 +
1622929015.4797425-CDS-H-paniculata_contig129:5221..53031622929015.4797425-CDS-H-paniculata_contig129:5221..5303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 5222..5303 +
1691480699.9547167-CDS-H-paniculata_contig129:5221..53031691480699.9547167-CDS-H-paniculata_contig129:5221..5303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 5222..5303 +
1622929015.4967594-CDS-H-paniculata_contig129:5746..58901622929015.4967594-CDS-H-paniculata_contig129:5746..5890Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 5747..5890 +
1691480699.9657817-CDS-H-paniculata_contig129:5746..58901691480699.9657817-CDS-H-paniculata_contig129:5746..5890Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 5747..5890 +
1622929015.5673342-CDS-H-paniculata_contig129:6423..66841622929015.5673342-CDS-H-paniculata_contig129:6423..6684Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 6424..6684 +
1691480699.9750621-CDS-H-paniculata_contig129:6423..66841691480699.9750621-CDS-H-paniculata_contig129:6423..6684Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig129 6424..6684 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig129.1815.1prot_H-paniculata_contig129.1815.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig129 4246..6684 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig129.1815.1

>prot_H-paniculata_contig129.1815.1 ID=prot_H-paniculata_contig129.1815.1|Name=mRNA_H-paniculata_contig129.1815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp
MLTVQAKPVRDSPDLFAACFRCGASNPLLSPFTTAIAAPSSGGSLPKDGH
GNRKYHGLAWGDACTTCRHPFVRSFFNFEALPLVEFQPEPGISDEDALEM
ITDTPKQGRRRKRGGGAKWREAKEGDADVMVPGDDDEDMATDFDQEDVAG
DEVFNRCINDTLEAQEESSEYTITVVPARCLRGLKREEVFRIRPGTCGPR
ARFYKNMMPDIPLALSQPCGRFFHEEDFEFEFLREGKCPFSRVKDMGDYG
SC*
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mRNA from alignment at H-paniculata_contig129:297..6871+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig129.1815.1 ID=mRNA_H-paniculata_contig129.1815.1|Name=mRNA_H-paniculata_contig129.1815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6575bp|location=Sequence derived from alignment at H-paniculata_contig129:297..6871+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGATTGGAGACTGGGTCGTTGCAGCTGAACTATTTGTCAAGAGCGGAGA GCCGCTCAGGGCTGCCGAAATCACGTGCAAAGGAAGGGGTGCAGGGTGGC AGGAAACATTGGCCGAGATAGTGCGGTAAGCAAGCTCATGTGATACAACC CCTACAGTTCTAGCGTATTGAATTAATGCGAAAGCCAAAACAACACGCAA CGAAAGCACCCTCAGCTGTGGTGCTTGCGTCCTTTTTGTTAGCGACAAAA AGCGAAAGCGGATACCGCAGGTGACCGCAGGTGGCGTAACATCGTAACAA GCAAATTGCTGTAACTTTTTCCACTCTAAAACTAGGGAACTCTTGCCGCC GAACGTCCTCTTACTAAATAGATATCGTCGATATTTACTGTTCGATGAAC TCCTTGGACATGACTAATCTCGCGTGTTGAGAGAATCGCAGTTACCATTC GTTGTGTGTAGTACTCGGGTTACAGACATGACAGCAACAGAACGCGGGAA AATCTTCCACTTATAACATGGTGCGATAGCACAGTCCAAATGATGCCTGC TCTCCGTTACAGTACAATGCAAGAACTCGAAAGTTACCAGCAACGTGCTC TTGATAAACGTGATAGATTCGGGGAGGGGTTGTCAACAGTAGATACCCAC ATCGTCGCAACGTTACATCTCCACACGTTGCTCGCTTGAAACATACTCTC ATCCGGACTAGCTGATCGTTCTCGACAGTGCGCTGTTAAATTGTGTTTAG GTCTGTACCAAAGAGCGAAGTGAAGGTGTTGAGCTTGTGTGGTCAAGAAC TCTCGCTGGCCGGTTTTGATAGCCTTGCGAGAGAAGCATATCTCAAGATG GACGACTTCAGCAACGTAATGATGTTATATGTCAAAAGCCAGGTAAACAT TTGTAGTACCAACACGTCTACCCAGCGGAGAGAGCTGACTGTGTTACATG TAATCACCCAAGTTTTCGCATTACCTATGACGTTGAAGTTTAAGGTGACA TTAGTGCTGGTCTTTACGTGATCTGATTGGGGACATTCTCCTTGACGCCG ACGACGTGAGTAAAAGTTCAGCCTCGTACATCAGATACTCCGCACATGCA TGGAACCACACAAAGCAAACACTGTGATGAGTCCATCACCTCTGGATTAG CTCGAATGAAACTGTCATTGCGTTGTACACATAATATTCTGCTCCTTGTA GACGGCAGACTCAGGTTCTAATCTGTCGTCGATGGATTCTCCTTTCCCTC TATTGTACCTCTGTTCGAACACTGTCAGAATTCAGAAATCTTATCACAAC TATTGTCCACTTATACTATTCCTCATCAATTATTAAACGCAAACCTGAAA ATATTGAAAAAGAATCAGCAATTATTGCACAAGAAGGTTGTTTGAAGTCT ATTACTATTGCTACAAATATTGATATTGCATCTACTGTTGCAGCATCCAA TATGATATATTACCATCAGTGACACAAGTGGATAATGTCCATCATCCTGC AGTTGCAACTGTTTGCCACTTGCAGAACTGGGCGGAAGCGGTCAAACTGT CGGAAGAACACGCGGGGAAATTCGACAACAGCGTGTTCCTGCCCTACGCA CTGTGGCTGCGAGATAAGGGTCGCTTCGACGAAGCATTAGGCGCTTTCCT CAAGGCTGGGAGGAGGGATCTGAGTCGACTCATGACGGAACGACTCATGT AAGTCCTGAACTGGTCATGATCAACGATATCAGGAGTGCAGTGTGGATCG TCCTACCGATACCTTTCTGCAGCGCCGATTTTCAATCTTGCTTCCTGTGT TGGTCTTCGCCTAGCCCTAGATGTTTCGTCGTTTTTGTAGAACTTCCCCA AGATTTCTTCAACGTGTGCGGTTGAAATGCAACACCCGGATACGACATAC AAACTTGAAGCATAGGAATTCTGTCACCATGTTGCTGACGAGTAATTTCA AATTACGTAAAAGACATGCTGCTCAGTCGATGCTCCAACAGAGCGCTTCA AAAAGAGTTCCATGTTCTTCGGCTCACTTTCGTGCGTGCTACCAATCACC GTGAACTTGGTGCCCTTCGAATTCAGATTGAATGCAGTGACAAAGACTCG TTTCTCCGACGCTTCCTACTACTACTGGAGATCGGCCACGGAGGCGTACG CTGCCGCGGAGGACCCCAGGAGCAGGTATAATGCTGAATGTTCATATGGA AATAGGGACTCGTCGTCGATGGCTTTCCAATATGGAGGGAGGGCAAGGTT GTATCAACTAGAAAATCAATCCCATGTTTCCTCTCAAACACTACACCCCC CACTGCTGCTGCCCTTTTTTGGTAGTTTAGTCTGTGCTGCAAAATCGAAA GGTTATGATCCTCGCCAACAGGGGATATTCAATGTATATCGTGTGTGGGC AAGGAATGACCAAGATGGCCCATACTCGCACATTCCGCCATGTAATATCG TCAGGGGAGTCGCAAGACATCATGCAGCTTTCGTTGGTTCATCTTCCCCA TCCAACTCCTCACAACAATCTTGTGATATCATTTGTCTCAATCGAGAGGT TTTAGCCACCCTATGAAGACAAGAAAACAAACATACAGAAAATATTCAAG TCAGTTACGAACAAGGGAAAAAGCACAACATGCCACGGGTCAGCGATCTA ATTGCTACGGTCTCGCAAAAACAACAGCGAGGAAGAAAGGACAGAAGCAT GGTCCTTGGGCAAGGAGCACTCTCATCTCGCTGACCTGTACCACGCTTTC CACCACGTGTACTCCTTCACCACGGACCCTTTCACGTCCCTACAGCCAGA GGTGCTACTGCAGGCAAGTAGCCCGTTATGTGTGTGCGTGCGCCAACCCG TGTTATACCTCACGTGTATGTGTGGTTTTTGGTTGGATGCTAAAAGCAAT CTCCGGAGGTCATGGGCGCTGCACGGCCAACTAGTTGGTAGATCAGGCAC GGTGTCAGCATATACCAGCAAGAGGGGCCAAGTAGCTGGGATAACGGCAT GTGATAGGTGGAATCATCGCAAACGTTGTAGATCCATTCACTGATCTGCA GCTGAGCGTGCCAGTACAAAGCCTCGAACATCAACACCGGCAAGTGGTGC AGAAGTTGCGATCAATATTTACGTTAGCCTCACAGCTATTGGACGTGTTT GAGTGTATTGACCTGCGAAAAATTGCGTTCTGCTCCACAGCAGGTGTTAT GGAAGTTTCTTTGGGAAGAGAAAATTGAAGAACAGGTCGATAACCTCCAA TAGATATCGAAAGCGTTGGCGGTGGTGGCGATTCATCACTTGATGTATAC TGGAAATTAAGGGTCGATTGTTCATGCCAGTAATGAATTTACGGACAAAG ATCATTTTGACAAAATATTATTCCATATCTTTCAGGCGTCTCGCTTTTTG GTGAACTCTCTGGGAGACGGTGAACCACCCAGGGGGATATCAAGAGCACA CACGCTCTACACTTTGGCGAAACAGGTGACTTCCGTAATCCAGTACTGCC TTTCTTACCCTCTGTAGCTCATCACCACATGTCTACGTCGTACTCTATAT TTCGGATTGCCTCACAAAATGACATCATGCAACTCAGTGATGACATGACG TGGGTTTTCGCTGCAATGTGCACCCAACGGCATACAACCCAAGGTATCCA GTTCTTGGGGTGTGCAAAGAAACGAATACAGATAAACCCGAGCTGCTATC TAAGAGTACCCACTTTAGAAGCTGACGACTGCCCACAGTTTCATGTACCC GAATTTTGGCCTGTACGACGTCAAATGGCGAGCGAAATGTACATTGCAGT AAGGTCAATGCCCACTCTCGCTCTAAAAGACCCACCCTCATCACGCCCAG GCCAAGGTTTTAGGAGCCTTCAAATTGGCGAGGTTCGGGTACGATCGGCT GCAGAGACAGAGGGTACCTGCACTTTGGCAAGATCAAATCGACCTTGACA TGCTCACAGTGCAGGTGAGCGACTGATTTGAACGACAGTTCTAATGCATG TGGTGGGTCAGCATATCAGCGGATCGGAGGGCGAGCGGGTATTGTTACCC TAGCAGCTTCAACAAATTGACCAACTACGGAATAGAAGTTGTCCATGCTC AATTGACAACAACTTTCTCTTCTCAGCGCACAGATACAACCCACCAGGAG GCGCTCTCGATAAGGTGTAACATAGGGCTGTATCCATGTACTTTCAACAC ACAACACGGCATTATCCACGTACGGGGGCCAACGCTGCCACCTCTGTGAG CAAATTTATCGAAGAAACATCACCAACAGTGCGAGGGATCCCGTCTTTCC CCCTTACCGAAATCGTATCTTCTGTATTCATCATTGAATCATGTCTCTGT GCGCCCTTCAACCTCTTGACCAGGCAAAACCCGTTAGAGACAGTCCGGAT CTATTTGCCGCATGCTTTCGATGTGGAGCTAGTAACCCCCTGCTAAGTCC CTTTACCACGGCAATAGCCGCCCCGTCCAGCGGTGGTTCGCTTCCGAAAG ATGGCCACGGCAATAGGAAGTATCATGGTTTGGCTTGGGGGGATGCCTGC ACCACCTGTCGACATCCATTCGTTCGCAGTTTCTTCAACTTCGAGGCTCT ACCTCTTGTGGAGTTCCAGCCTGAGCCTGGGTGAGCAAACCGTTCAGTTG CCACCTATATTGTGGGGGGTGATGTTGTGAAGATTAAGCAAATAAGGATG ATCCCGTCACAGCATTCTGTTCCCGTGGTCACGAGCATTCACGGATTGAA GGGGAGGTGGGGGTTACGGGGATGTATGACCGCTTTCGCTTCACTGAGGC GGACCGGACCGTTCAGTGCGGTGGATGCTGGTCTCCTCAATACCCCTTTA TCATGTGTTATTAGTGCTTCAGGTGATTTTGGGTTTCCAAGGTTTTTCCG ATGTTTGTTTTAATGCCTCTCTCAGAATTAGCGACGAGGATGCACTGGAG ATGATTACGGACACCCCTAAACAAGGAAGGCGACGAAAACGCGGCGGTGG CGCTAAGGTGCGTCTCTCCAATCTAGAGTTTTCGATGTGTAATGGCGCAG CGAAACCGGCAGTCGCGGCATGATCTGAAGATGGCTTTTCAAGTGTTATA CGTAGATCCCCCTGCCCATCGTGAAGTTCAGCGAAGACATTTTCTGCGCT ATGTCGGTCTACTGCCGCATTGACATCGCTGAACCATAAGCTTTGACGTT TCCTTATCAATGGCAACATAGGGATTGGGGAAAAAATGTTCCAAATCGTT CGACTATCACAACGCGTGTTGGGGTCTAGGCAATTGTTTCTTCTACTGAA CACTTGACCATCTCCCTAGCGAGTAACCACGGTGAGTAAAAATGTTGAAG AATAAGGTGCGAACGAGCATGATTTGTTCATTTGGACCCTGTCCAGTACC AACGGTGTTTGCTTTGCTGTTGTTATCAACGCTCAAACATGCGACAACAG TGGCGTGAGGCTAAGGAAGGAGACGCTGATGTGATGGTTCCAGGGGATGA TGACGAAGATATGGCGACCGACTTCGACCAAGAAGACGTAGCGGGAGACG AGGTGTTCAACCGCTGCATCAATGATACTCTTGAGGCACAAGAGGTACAT AAGTTCGTGTGACCGGACACTACTTCCAAAGTAGCACGAACACGGATTTC ATAGATCTGTTTGCGCCGTTGACTCTCGCTAGAGGAGAGTACTGACTCTG ATGTCGTCGTCAATGTTTGCAGGGGACCTTAATACGTGTACGTTCTTATG GTTAGCAAATCGAAGGTCCCCTAAAACGAGATTGCTATCAAGAGCGTGTC GCTGTTTTCGCAATCATACTTTAGTTAAATTTAAGCAGCTATGAACACTC CCTCCACGCAACACCAGCGACGTCCCCCTCCCTCACCCACCCCGCCCCCC CGCACGCTTAAGGAATGTCGTCTTTGGTCAATGCTCAGCTGACGAAAGCG ACTATCACGCTCCCCCCCGTCCCAACCCCCCCCCAGCTCAAACTTGAACT ATACCGCTATGCACAGCTCGCGGAAGGTAATGTTCTCCATTTTTGTTCAA GCCTCGAGTTGCTGTTTTTCGACGGGGTACATGTCAGTGTAACTTACCCA GCGTTTCCCCTGCTCCCTGTTTCTCAGGAATCGAGTGAATACACCATTAC AGTTGTTCCAGCTAGGTGCCTGCGGGGCCTGAAAAGGGAGGAAGTTTTCC GTATCCGTCCAGGAACGTGTGGCCCCCGCGCTCGGTTCTACAAGAACATG ATGCCGGATATACCACTAGCACTATCCCAGCCTTGTGGAAGGTTTTTTCA TGAGGAGGATTTCGAGTTCGAGTTTTTGAGAGAGGGAAAGTGTCCGTTTA GTCGCGTCAAAGACATGGGGGACTACGGTAGCTGTTGAAAAGACCTGTAT TCAATTTTATGTGCACTATGTGACGAGAAATCCCGAATTCCTGGGTTGGA TTTGCTTGTTGTGGCATATTTAAGGAAATCAAAATAACACCGTTCGGTTA ACGGTATTAGTCAAGGAGGGGCACACTACGGCGTATATATAAAATCACAC TGTCAATTTGCAAGGCTGCACGAGC
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Coding sequence (CDS) from alignment at H-paniculata_contig129:297..6871+

>mRNA_H-paniculata_contig129.1815.1 ID=mRNA_H-paniculata_contig129.1815.1|Name=mRNA_H-paniculata_contig129.1815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig129:297..6871+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCACAGTGCAGATGCTCACAGTGCAGGCAAAACCCGTTAGAGACAG
TCCGGATCTATTTGCCGCATGCTTTCGATGTGGAGCTAGTAACCCCCTGC
TAAGTCCCTTTACCACGGCAATAGCCGCCCCGTCCAGCGGTGGTTCGCTT
CCGAAAGATGGCCACGGCAATAGGAAGTATCATGGTTTGGCTTGGGGGGA
TGCCTGCACCACCTGTCGACATCCATTCGTTCGCAGTTTCTTCAACTTCG
AGGCTCTACCTCTTGTGGAGTTCCAGCCTGAGCCTGGGCAAAACCCGTTA
GAGACAGTCCGGATCTATTTGCCGCATGCTTTCGATGTGGAGCTAGTAAC
CCCCTGCTAAGTCCCTTTACCACGGCAATAGCCGCCCCGTCCAGCGGTGG
TTCGCTTCCGAAAGATGGCCACGGCAATAGGAAGTATCATGGTTTGGCTT
GGGGGGATGCCTGCACCACCTGTCGACATCCATTCGTTCGCAGTTTCTTC
AACTTCGAGGCTCTACCTCTTGTGGAGTTCCAGCCTGAGCCTGGAATTAG
CGACGAGGATGCACTGGAGATGATTACGGACACCCCTAAACAAGGAAGGC
GACGAAAACGCGGCGGTGGCGCTAAGAATTAGCGACGAGGATGCACTGGA
GATGATTACGGACACCCCTAAACAAGGAAGGCGACGAAAACGCGGCGGTG
GCGCTAAGTGGCGTGAGGCTAAGGAAGGAGACGCTGATGTGATGGTTCCA
GGGGATGATGACGAAGATATGGCGACCGACTTCGACCAAGAAGACGTAGC
GGGAGACGAGGTGTTCAACCGCTGCATCAATGATACTCTTGAGGCACAAG
AGTGGCGTGAGGCTAAGGAAGGAGACGCTGATGTGATGGTTCCAGGGGAT
GATGACGAAGATATGGCGACCGACTTCGACCAAGAAGACGTAGCGGGAGA
CGAGGTGTTCAACCGCTGCATCAATGATACTCTTGAGGCACAAGAGGAAT
CGAGTGAATACACCATTACAGTTGTTCCAGCTAGGTGCCTGCGGGGCCTG
AAAAGGGAGGAAGTTTTCCGTATCCGTCCAGGAACGTGTGGCCCCCGCGC
TCGGTTCTACAAGAACATGATGCCGGATATACCACTAGCACTATCCCAGC
CTTGTGGAAGGTTTTTTCATGAGGAGGATTTCGAGTTCGAGTTTTTGAGA
GAGGGAAAGTGTCCGTTTAGTCGCGTCAAAGACATGGGGGACTACGGTAG
CTGTTGAGAATCGAGTGAATACACCATTACAGTTGTTCCAGCTAGGTGCC
TGCGGGGCCTGAAAAGGGAGGAAGTTTTCCGTATCCGTCCAGGAACGTGT
GGCCCCCGCGCTCGGTTCTACAAGAACATGATGCCGGATATACCACTAGC
ACTATCCCAGCCTTGTGGAAGGTTTTTTCATGAGGAGGATTTCGAGTTCG
AGTTTTTGAGAGAGGGAAAGTGTCCGTTTAGTCGCGTCAAAGACATGGGG
GACTACGGTAGCTGTTGA
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