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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical leucine rich repeat protein |
| Ec32 ortholog | Ec-07_002860.1 |
| Exons | 7 |
| Model size | 1133 |
| Cds size | 465 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12893.1813.1 >prot_H-paniculata_contig12893.1813.1 ID=prot_H-paniculata_contig12893.1813.1|Name=mRNA_H-paniculata_contig12893.1813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
MKPYQRCASTDEHIEKLQSDLQATKKAALLEMENAKGELAVRRQSQYEVL
NQLQEARDSRQRAVDGLETREEQLEVQRQQSAELEMRLRAVQTDLETLKT
CVREREAKGDEDLTMANARLQDEKKRQDVSKRPYEKDRPEKHVYSKRSFA
YSPV* back to topmRNA from alignment at H-paniculata_contig12893:594..6496- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12893.1813.1 ID=mRNA_H-paniculata_contig12893.1813.1|Name=mRNA_H-paniculata_contig12893.1813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5903bp|location=Sequence derived from alignment at H-paniculata_contig12893:594..6496- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTTGTTGGAGCAAGAGGAGTTGAAGCTCGAGCACGTCCTCTCCGAGCGA
GATGAAGCCTTATCAGAGGTGAGGAAGACAATCAAGTATCTGCACGCAGG
GCCATGTCCTTCGATACTTGAATTGGCCACTTTTCTCAGTATATGTAAAA
TTAATGCTGAAGGCTACATTTTTATCACATGGAATGTATATGGCCATATC
GTGGCACAGGTGGTTGAGCTGAAGCTTCGAGTGAAAACTAGTGACGAGAA
GTATGCAAAGCGATCAGCCACTCTGGAGGTGAAGCTGATCAAGGCCATTA
ATGAGAACATCGCTCTCAAAAAAAAGTAAGGACAGTAATTTTGCTATTTT
GGGGAAGAGGTACTATTGAGGGCAACCGACAGCCACATTATTCATGCGAG
CAACATGCACTGTCGTGTCCGCGTGTTTTCGGTATTTAAATTGTTTGACA
AGCATGGAAGTGTTTACAGACACATCCGATAGAAAGAGTATCGGTTGGTC
GAAATGTTGTTGAAGAAGATATACAGCCGCAACCGATACCGTCGCCGCCC
TCTTTCCTTGGACTATTTGGACGATACGACAGTGAGAAATGTGAGCTTCC
AGTCACCATATCACCATGTTACCATGTCACCATATCAACGTCCATAGGCT
GGGTGTTTGATGCACAATTTGATTTGAAATATATGTATAAGGTAGAGATG
GAAGCCAATCGTTACGGCGTTTACTCTAAATATACTAAAGCATGGGGATA
TGTGGGACATGTGATGCTCCGGAGAGCGGCCTCGATAACATTCGTTATTA
TTGGTCGCTTTACTTGAATGGGTCCCGGCCAATCGTATCCATGGAACTAC
AACACCAAATTCAGCCCTGACAGAGAGCGAAGCAGAATGCCCCCCCCTCC
CTCCCCCCCCCCGACCGCCAAAACGTTATGATCGTTCGATGTGATATAGG
TGTGCAAGTACAGATGAGCACATCGAGAAGCTTCAAAGTGACCTGCAGGC
TACCAAGAAGGCTGCCTTGCTTGAGATGGAAAATGCGAAAGGAGAACTCG
CAGTCAGGCGTCAAAGTCAATACGAAGTTCTCAACCAACTACAAGTGAGT
CATCAGTGTTAGTTATGATTCAAAAAGGGTTCGAACCCGAAAATTACTGT
TTGATTGATTCCTCCAGCTGTTAAGTTTGACAGCTCCTCATGTACGACGA
ACGAAGCGAACCTCATAAAGAAACGAAATGTTGATGTTGACTCAAGAGGC
TACGGGCACGAGCTCTGTTTGCTGCAACATTTTCTGTGGATATGTTCTCT
CGGCCTCATTTTGTGCGAGGGGATAACTTAATTATTGCTATTTGTACATA
GTGCCATGTTGTTACCTAGATCTATGTCTGTCTAATATCAACGTGAGCAC
TTTAAGGTCGATGTGTCGAATCAGATTGTAGGATTCCAAGGCTGCTTCCG
AATTCACCCGGTGGAAATTAAAAAGTGCAGGAGGCACGAGATAGCAGGCA
GCGGGCGGTAGATGGACTGGAGACTAGAGAGGAACAGCTCGAAGTACAAA
GGCAGCAGAGCGCTGAGCTGGAAATGCGACTGAGAGCAGTCCAGGTGATG
AAAGCTAGCGTTTCGATTCACCTCAATGCTGCTATGTAAAGTTGTTGGTT
GTAGTGTACGCCGCCAGTGTGCTGGGGTATCCACGCTATTAAATATGTCC
CCAAGGACGTATTCGGTTTTGGTCTTTGCTTGTTGGTGAAATCACTGTCA
GACTGTCACCTGAACGGAACGAATATCGCGTAACGTGTCTGTCTGCCAAT
GCAGATGGTAGGGCTGTACATGTAGTGTAGTACCTGGTAATGGAATTTTT
GATGGACTTGATGCAGTAGTGGGATTTGACGTTGCCCGTCACAGCATCAT
GTATCACACGCCCTTTTATACGTTGCTATCTTGCCATCACATTTTCGGTA
TGCAGCAAAGATAGCCAACTACTGACTGACGGGTGTTGGTGTAGTGTGTC
ACGTAGGTGTCATGTGCCATTTGCCATGTGTTGTGTGATGCCGACAGACT
GATCTGGAGACGTTGAAAACATGCGTGAGGGAGCGAGAAGCCAAAGGTGA
TGAAGATCTGACCATGGCCAACGCGAGGTATGTATCACGTATCAATTATG
TATGTGTGTGTGTATGTATGCATGTATGTATGTATGTACGTATGTATGAA
ATATGTGGAGTATGTTCGTATGTACGTTGCTCAGTACCGTACCTGCTCAT
GAGTGAGCGTGTTAGCCGTAACACCAATAAGCATTATTAACAAAAGGGGT
GGATTCGTAAGTTCCTGCTCATGCTGCCTGGCGATCAAACACACACAATT
ATAGATAATTCCAACGTTGTTGCTTTATGGTACCGTATGTATGCTCGTTT
CGCCTAGAGATAACGAAACCGCCGACCTTGACTTTTGCGTTGAGGTGAGT
TCGTGATGGTGTCTTTCTGCATGCGGCGTTCCCCTAGGATCAGTTTATTT
TATTGGCATTTGGGCGGTGTATGGTGACTTACTGCTGAACGGTCATGCTA
CCATACTTAACAACATGGTGCTCTAGTGTATTCCGTCGTAGATAGAATGA
CGTGATTTAGGCCATTGCCTATTTGTAAATGTCACATTCATGGGCGTGCC
AGATAGGATGCCACACATAGCCACGGTATCGGGCGCGAAAAACGCAAAAT
ACATAGTAGATTAATGTCGTAGCGATGCGTAAATGGCTGTCGGTATTATC
AACATGAAATTTTACGAGTAGAATCTACTCCCGAATTTGTTCTGCGAAGT
GTCGACATTAGACATTAGACCTTAGACATGAAAGGCTGATGACCTCGCTA
GCTAGCTGCACTTAAAAACTTAGATATCGAACCGAGTCCAAGAAGCATTT
TCTGTGTGTTCATATGATACTTGTTTCGCTGAAATCAGACTGTCCACGGA
GATTTCTTTGACCGAAACATTGCAAGATAAGCTGGCCACGATGAGCAGGA
GAATTGTCAGATTGGTCGAAAGGCACAAGGAGCTTCAGACAGAGGTGATT
TAGGAATGTCTGACTGTAAGGTGTGAGGATGGGCACTATAGCTTGATTGG
TTCTGATTCGTCTCCACCAACGAACAACAAACTACGCACAGGGGATCGCT
CCGACTAACGCACAACACATAGAGTCAACGTTACGGTGAAGCGATCCCAT
GGCTGAGATCAAGAAGAGTTGCATTGGCTGGAGTAACCTCTCCCACGTAC
TGACGATGATAATGACGACGATGATGATGCTAATTCTTATCGTTTTATCC
AGTTTTACATCAAATGCAATGTTTTGAAATGCAACTAACATCATGCTCAA
GACTAACAACTTTTGACTCTTGATATACATGTACATAATATATTGGTACA
GTGCCTCGCTACTACTCGCATTTCGTAACGGCTAGCGCTCTAACCGGCAG
TTGATTGGATTGTCACTTTGCTACCAAGCACTAAGATAATTCGAACGACA
TAATAATCAGAAGCAAGGCTCCTGTTACATATTACATATTACATATTATA
TTACATATCATGGTGGATTTTTTTCATGCTGTATCTCCCCTTTGTGTTCT
TTCTTCATGGCATGCTTGATGGCATGGTGGCAGGCTTCAAGACGAGAAGA
AGAGGCAAGACGTCTCCAAGAGGCCATACGAGAAGGACAGGCCAGAGAAA
CACGTCTACAGCAAAAGGTAAGTATTGAGTGCTAGTGTGAATCTGTTGTA
GTCATGGTTCGTAGATTTATTCGTATGTTGTTGTCTATTTCGTATGGAGC
TGTCTATTTTTTGTGAAGTTGACTTTTTCGTGTGTAGTTGTACATTTCGA
CGCTAGAACCGTGGCACAGCATGGCCTGGCTTAGCCGTCCCTTGTACGAT
GAACGTACTAACTCTTCTTGTTTGGACAATGACAGATACGTATCTATCAC
TCCTGGTGTGGCATACTACTTTGAACTCGAGCATCCTAGAGCTATAGCTA
TATCGATAGTAAAATATCTCCATATTGAAGCCCACTCGATCCTTTTCGTT
TGCACATGCCACACAGACGTATGACTTATCACATATAATACATCACATAC
AACCGTACTACGAACAATTTCCCAGTCTTGACCATACTGAAGCACAGCAT
AGCAGTACCTACCGAATAATAGTATTCTCTACACACGCTGCTACTGCTTG
ATTGCGTACAGGTCGTTCGCCTACAGTCCGGTCTAGATCTGGAACGCACA
CAGTTGCGCCTTCACGGAGCAATCGAAGCGTTCAACACACAGGCAGAGGC
ACAGGCACAGGCGCAGCTGAAGAACATGAAGAACACGTCGCCCGCGCCCG
CGCGGGTGGGCCGTTGCAGGAAACGTTCGAGTGCTTCAGGTGTGTCGGTA
TCTCGGTACTTTGGTATATTGGTATTGTGTTGGTAGCTTTGGGGGGAAAC
CAAAAGAGTTCGACGCATGTGGAGCATGTTGGCGTAGCTGAAAACAAAAC
GGGACAGCCGAATTTCTGGCATGAAAACTACTGTAAATCATATATCAGGT
TCAGTGGAAGAGCGACCTGCTCTTTTTTCTGTAACCCTTTCCGTATAATT
TGGTTGACATCGAAATTGAGCCTACACGATAGTATCATACCACAGCCCTG
AATGTTCTTTGCTTGTTTGTCAATCAAGTGTATTTGACACTGTATGAGTG
TGAAGCCAGATGGAACTAGTGAAGCGAGCATCGGCAACCTTCGGCAAGCC
AAGTTGATCTAACTAACGCAAAGGTAAGGAATTTGAAAGCAAAAAGAAAG
AGGGGTAGCAAAAGGCATTGCAACGTGAGGTAATATATCTCCGTATCAAT
ACCGCTATCAAGTACCAACTATAAGATGTCAGCTATCAGCTGTGGTCGTC
ATGTTTACCATGCCTTTTGCCTTGTGCTCTTGATCCTTCCCGAATCCATC
GGAATTACGTACACCACACACCAAGCACCATACACCATACACCGTACCAT
AATCATAGGCGCTATGTTTTCGACTTGCTTGCTTACATTAAATAGCAGGT
ACGCTGCACCACACTTACCAGGTCTATATTCCTCCTTTGTACTTGATTTT
TCATCATACTGTAATGTTCTTTAAAGCCTCTTCCCCTGTGTTTATGTCTA
TTTCTAGGCAACAATCAAAATAAATAAATGCGGTCGCAGCATCAGTCAGC
GTCAAGGCCAAGGTTGCCCTCGCGACTCCGTGACTGTACTATGTTTGACA
TAGTACTGAAGTGCTTAGGTCTAGTACTAGTATACCCACGAACAAGTGCG
TTCCATGGGGGAAAAAAGAAAATTGAAATCGAGTTTGGAGTGAGTCACTG
TCGGACTTAACGAACGTTTTTCGCTTTTGTATGCTGCTCTAAGAAACGTG
CATGGGTGCTGGGTGCTAATCGACCTAATGAATGGACAGGTTCTGATTCG
ACGCAAAGTCGGTGGGAGGTTGGTGATGGTGGTGATGGCGGTGGCGATGA
TGGCAATGGTAATGCTTTGTGGTCAAGGAGGCAGTTGCTGCGCAAATACC
TGTCTTTCTTCGTTTTGATGTCCTCCACACCCGTTGCTCCTACGATTAGC
AACACTACTTTCATCAAGAAGGCTATCGCCAGCACCAAGATTACCTCTAT
CGCCATCATCAACGCTGGCGATCGGGACGAAGACAAGGGTAAGACATCCG
TCCATTCATTGGGCCATCCACCCATCCATCGGAAATATCAGAATGTTGTC
GTGGGTATCGCAGTGTCAACACAGACAGTTCCTACGTACCTCGCCCGTTG
TAGGAAGGAGGATCGAGTAGAGCAGTACTCGTAGTAAAAACGCGCTGCGT
CCAAGCCTCACCCTGAACGTATACACCACCCTTGCCATAACCACAGCACA
TCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig12893:594..6496- >mRNA_H-paniculata_contig12893.1813.1 ID=mRNA_H-paniculata_contig12893.1813.1|Name=mRNA_H-paniculata_contig12893.1813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at H-paniculata_contig12893:594..6496- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCCTTATCAGAGATGAAGCCTTATCAGAGGTGTGCAAGTACAGAT
GAGCACATCGAGAAGCTTCAAAGTGACCTGCAGGCTACCAAGAAGGCTGC
CTTGCTTGAGATGGAAAATGCGAAAGGAGAACTCGCAGTCAGGCGTCAAA
GTCAATACGAAGTTCTCAACCAACTACAAGTGTGCAAGTACAGATGAGCA
CATCGAGAAGCTTCAAAGTGACCTGCAGGCTACCAAGAAGGCTGCCTTGC
TTGAGATGGAAAATGCGAAAGGAGAACTCGCAGTCAGGCGTCAAAGTCAA
TACGAAGTTCTCAACCAACTACAAGAGGCACGAGATAGCAGGCAGCGGGC
GGTAGATGGACTGGAGACTAGAGAGGAACAGCTCGAAGTACAAAGGCAGC
AGAGCGCTGAGCTGGAAATGCGACTGAGAGCAGTCCAGGAGGCACGAGAT
AGCAGGCAGCGGGCGGTAGATGGACTGGAGACTAGAGAGGAACAGCTCGA
AGTACAAAGGCAGCAGAGCGCTGAGCTGGAAATGCGACTGAGAGCAGTCC
AGACTGATCTGGAGACGTTGAAAACATGCGTGAGGGAGCGAGAAGCCAAA
GGTGATGAAGATCTGACCATGGCCAACGCGAGACTGATCTGGAGACGTTG
AAAACATGCGTGAGGGAGCGAGAAGCCAAAGGTGATGAAGATCTGACCAT
GGCCAACGCGAGGCTTCAAGACGAGAAGAAGAGGCAAGACGTCTCCAAGA
GGCCATACGAGAAGGACAGGCCAGAGAAACACGTCTACAGCAAAAGGCTT
CAAGACGAGAAGAAGAGGCAAGACGTCTCCAAGAGGCCATACGAGAAGGA
CAGGCCAGAGAAACACGTCTACAGCAAAAGGTCGTTCGCCTACAGTCCGG
TCTAGGTCGTTCGCCTACAGTCCGGTCTAG back to top
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