mRNA_H-paniculata_contig12887.1811.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12887.1811.1
Unique NamemRNA_H-paniculata_contig12887.1811.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 5.080e-108
Identity = 164/348 (47.13%), Postives = 234/348 (67.24%), Query Frame = 1
Query:    1 VTNNGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALEEETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARN-PNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPAAPVEFNSTDFVNRMEQYQAKDGRVEFISAFPV 1041
            V NNG+GTLTA Y+S FPGDYL+++ED++L ++   G G    RP+ GSPF LT+SG   +D+  LP C       +GE   +A+++W+ G+W+SSN+A    GVLR GWVFQP+ CV+E F Y D+M  A L+E  W+L LG SILRG+F +++D+ALAQGQK +   S V +CWG++DIRIG+LRI+YQD+RL+   + +D  VC++EKLAS STA+YV SA+  L++ IF  ++          WP++I APS++  +   PNL I V M+ALP  W GTL+ LD + G+ + WN GNPT+  L  + P    +P   +S   + RME+Y+ +D RV F+SAFP+
Sbjct:  137 VRNNGNGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRG----RPIIGSPFSLTVSGDPAVDVDALPVCG-----GEGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKP---------WPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSG--LERMERYRQRDPRVTFMSAFPM 464          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 2.360e-101
Identity = 167/348 (47.99%), Postives = 227/348 (65.23%), Query Frame = 1
Query:   10 NGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGP-QTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARNPNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPAAPVEFNSTDFV--NRMEQYQAKDGRVEFISAFPV 1041
            + +GTLTATYKSDFPGDYL+++E++     SE G G     P+ GSPF L I+G   TLD+ +LP C + D   DG    IA  FW+ GTW+S+NVA+A  GV+R+GWVFQP+ CV +TF Y D+M  A+ + E TW++V+G S+ RGVF +L+D+ALA GQK D+  S + +CWG+ D+R+G+LR+TYQDMRL+      D VVC+NEKL S ST+++V SAK  L + +F    Q         WP  I+APS+L   +N N  IEV M++LP  W+G LLF+DHMAGF+ +W  GNPT   L  +  T          TD V   +M+ YQ +D RV F+SAFP+
Sbjct:   65 SNNGTLTATYKSDFPGDYLVHVEEV---QPSERGEGL----PIVGSPFSLKIAGDFPTLDVHSLPVCGSQD---DGSTD-IADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTVFRDGTQ---------WPATILAPSYLVPEKNVNHMIEVLMDSLPPSWEGKLLFVDHMAGFSIHWTQGNPTRAALKDVRITATGR----TPTDDVALRKMDGYQTQDPRVSFMSAFPM 388          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 1.470e-99
Identity = 169/359 (47.08%), Postives = 227/359 (63.23%), Query Frame = 1
Query:   10 NGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGP-QTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARNPNLAIE------------VTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPAAPVEFNSTDF-VNRMEQYQAKDGRVEFISAFPV 1041
            + +GTLTATY+SDFPGDYL+++E++  + + E         P+ GSPF LTI+G   TLD+ +LP C + D   DG    IA  FW+ GTW+SSNVA+A  GV+R+GWVFQP+ CV +TF Y D+M  A+L+ E TW++V+G S+ RGVF +L+D+ALA GQK D+  S + +CWG+ D+R+G+LR+TYQDMRL+      D VVC+NEKL S STA++V SAK  L +  F    Q         WP  I+APS+L    N N  IE            V M++LP  W+G LLF+DHMAGF  +W  GNPT   L  +  T   A     + DF + +M+ YQ +D RV FISAFPV
Sbjct:   50 SNNGTLTATYQSDFPGDYLVHVEEVQPSKRGEG-------LPIVGSPFSLTITGDGPTLDVDSLPVCGSQD---DGSND-IADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTAAFVHSAKEFLASTAFRDGTQ---------WPATILAPSYLVPENNVNQMIEAYIRPASCAHAQVLMDSLPPSWEGKLLFVDHMAGFRIHWTQGNPTRTALMDVRIT---ATGRTPTDDFALRKMDGYQTQDPRVSFISAFPV 385          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 1.290e-97
Identity = 163/347 (46.97%), Postives = 229/347 (65.99%), Query Frame = 1
Query:   16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQ-TLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAAR--NPNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPA-APVEFNSTDFVNRMEQYQAKDGRVEFISAFPV 1041
            DGTLTATYKSDFPG+Y ++IE++ L+ K E         P+ GSPF LTI+G   TL++ +LP CS+ D+DA+ +   IA  FW+ GTW+SSNVA+A  GV+R+GWVFQP+ CV +TF Y D+M  A++  E TW+LVLG S+ RGVF +LID+ LA GQK  I +S + +CWG+ D+R+G+LR+TYQDMRL+ +  + D V C+NEKL S+ST++ V SA   L + +F      +DGG    WPTM++A S L   R  +   ++EV M+A+P  W+G L F+DHMAG   YW   NPT+  L  +       +P + N    + +M+ YQ +D RV F+S FP+
Sbjct:  129 DGTLTATYKSDFPGNYSVHIEEVQLSKKGEGV-------PILGSPFSLTIAGDAPTLNVNSLPVCSS-DEDANTD---IADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQDMRLFRFTISTDSVACNNEKLTSESTSALVHSAGQFLASTVF------QDGGQ---WPTMMMAASRLIPTRAEHTQFSVEVLMDAMPPSWEGKLFFVDHMAGLGNYWTEENPTMTALKNVGIWFDRMSPDDDNG---LGKMDGYQTRDPRVSFMSVFPM 452          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 2.150e-97
Identity = 157/355 (44.23%), Postives = 228/355 (64.23%), Query Frame = 1
Query:    1 VTNNGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGK----DNNRPVTGSPFRLTISGPQTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAA-LEEETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYH-ATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARNP-NLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPAAPVEFNSTDF-VNRMEQYQAKDGRVEFISAFPV 1041
            V +NGDGTLTATY+S +PGDYL++++D+  T  S  G GK    +  + +  SPFRLTISG   +D+ +LP C       D E       FW+ G+WISS  A+A+ GVLR GWVFQP+ CVH+TF Y D+M  A   +E TW+L+LGTS+ RGVF +L+D+ LAQGQK+D   S + +CWG+ ++R+G+LR+TYQD+RL     A +D  VCH++KLA ++ A +V +A+  L   +F + +Q         WP++I+AP  +  +    NL I V M+ALP  W+GTLL ++HMAG  F +N+ NPT   L  +NPT   +  +F   D  + R+++YQ +D R +F+S FP+
Sbjct:   22 VVDNGDGTLTATYESPYPGDYLVHVQDV-CTDMSVVGRGKKRPGERAKAIVDSPFRLTISGEIAVDVDDLPLCDAEHPQEDEED-----TFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQDLRLHEVGLAQDDSAVCHDDKLAINNVAVFVAAARRFLRRSVFAAGKQ---------WPSVIMAPPFMEDSDEAANLPITVIMDALPSAWNGTLLMMEHMAGLGFTYNYDNPTAATLAEVNPTWHLS--KFIGVDNGLGRIKRYQQQDARTKFMSTFPI 359          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.470e-77
Identity = 154/389 (39.59%), Postives = 221/389 (56.81%), Query Frame = 1
Query:   16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQ-TLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQD--------------------------MRLWYYH---ATN---------------DKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARNPNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPT-LPAAPVEFNSTDFVNRMEQYQAKDGRVEFISAFPV 1041
            +GTLTATYKSDFPGDYL+YI++++ + K       D   P+ GSPF LTI+G   TLD+ +LP CST D DA+     IA  FW+ GTW+SS+VA+A  GV+R+GWVFQP+ CV +TF Y D+M  A+L+ E TW+LVLG S+ RGVF +LID+ LA GQK DI +S V +CWG+ D+R+G+LR+TYQ+                          +R   +H    TN               D +VC+NEKL S STA+++ SA+  L + IF       +GG    WPT+++APS+L  + N                +GT   ++ +      W   NPT+  L+ +  + L  +P + N    + +M+ Y+ +D RV F+S FP+
Sbjct:   26 NGTLTATYKSDFPGDYLVYIDEVESSKK-------DEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHD-DANKN---IADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQEAVTDGLGRELAISALEWRQFHRELCWLRQLLFHNEAETNIMLLFFTNAGLSNSVDSLVCNNEKLMSGSTAAFIHSAEQFLASTIF------REGGP---WPTVVMAPSNLIPSNN----------------EGTQFSVEEVL-----WKEENPTMTALEDVRMSYLSRSPDDDNG---LGKMDGYETRDPRVSFMSVFPM 370          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 1.310e-60
Identity = 102/188 (54.26%), Postives = 139/188 (73.94%), Query Frame = 1
Query:   16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQ-TLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQ 573
            +GTLTATYKSDFPGDYL+YI++++ + K       D   P+ GSPF LTI+G   TLD+ +LP CST  +DA+ +   IA  FW+ GTW+SSNVA+A  GV+R+GWVFQP+ CV +TF Y D+M  A+L+ E TW+LVLG S+ RGVF +L+D+ LA GQK DI +S + +CWG+ D+R+G+ R+TYQ
Sbjct:  122 NGTLTATYKSDFPGDYLVYIDEVESSKK-------DEGVPILGSPFSLTIAGDAPTLDINSLPVCST-HEDANKD---IADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQ 298          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 2.620e-60
Identity = 103/188 (54.79%), Postives = 138/188 (73.40%), Query Frame = 1
Query:   16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQ-TLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQ 573
            +GTLTATYKSDFPGDYL+YI++++ + K       D   P+ GSPF LTI+G   TLD+ +LP CST  +D + +   I   FW+ GTW+SSNVA+A  GV+R+GWVFQP+ CV +TF Y D+M  A+L+ E TW+LVLG S+ RGVF +LID+ LA GQK DI +S V +CWG+ D+R+G+LR+TYQ
Sbjct:  105 NGTLTATYKSDFPGDYLVYIDEVESSKK-------DEGVPILGSPFSLTIAGDAPTLDVNSLPVCST-HEDTNKD---IPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQ 281          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 1.010e-58
Identity = 104/199 (52.26%), Postives = 138/199 (69.35%), Query Frame = 1
Query:    1 VTNNGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGP-QTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWY 591
            V +   GTLTATYKSDFPGDYL+Y+E++     SE G G     P+ GSPF L I+G   TLD+ +LP C   D   DG    IA  FW+ GTW+SSNVA+A  GV+R+GWVFQP+ CV +TF Y D+M  A+L+ E TW++V+G S+ RGVF +L+D+ LA GQK DI  S + +CWG+ D+ +G+LR+TYQD+  WY
Sbjct:  136 VGDGNTGTLTATYKSDFPGDYLVYVEEV---QPSEQGEGL----PIVGSPFSLKIAGDFPTLDVNSLPVC---DSQEDGSND-IADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQDV-YWY 322          
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 2.020e-43
Identity = 84/187 (44.92%), Postives = 113/187 (60.43%), Query Frame = 1
Query:   16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALEEE-TWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQ 573
            +GTLTATYKSDFPG Y +YI++++L+ K  N                                              IA  FW+ GTW+SSNVA+A  GVLR+GWVFQP  CV +TF Y D+M  A+L++E TW+LVLG S+ RGVF +LID+ LA GQK DI +S + +CWG+ D+++G+LR+TYQ
Sbjct:   62 NGTLTATYKSDFPGTYWVYIDEVELSRKDANN--------------------------------------------DIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQ 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LJ62_ECTSI5.080e-10847.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FXE0_ECTSI2.360e-10147.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8P1_9PHAE1.470e-9947.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGZ7_9PHAE1.290e-9746.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLN2_ECTSI2.150e-9744.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGW9_9PHAE2.470e-7739.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHZ4_ECTSI1.310e-6054.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K539_9PHAE2.620e-6054.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXD9_ECTSI1.010e-5852.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G348_ECTSI2.020e-4344.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12887contigH-paniculata_contig12887:3449..7065 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.4
Seed ortholog evalue7.8e-90
Seed eggNOG ortholog2880.D8LJ62
Hectar predicted targeting categoryother localisation
EggNOG OGs2E5RD@1,2SCI8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1041
Cds size1041
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12887.1811.1prot_H-paniculata_contig12887.1811.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12887 3449..7065 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929014.7183971-CDS-H-paniculata_contig12887:3448..36131622929014.7183971-CDS-H-paniculata_contig12887:3448..3613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 3449..3613 -
1691480699.622511-CDS-H-paniculata_contig12887:3448..36131691480699.622511-CDS-H-paniculata_contig12887:3448..3613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 3449..3613 -
1622929014.7294307-CDS-H-paniculata_contig12887:4448..45171622929014.7294307-CDS-H-paniculata_contig12887:4448..4517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 4449..4517 -
1691480699.6313884-CDS-H-paniculata_contig12887:4448..45171691480699.6313884-CDS-H-paniculata_contig12887:4448..4517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 4449..4517 -
1622929014.7459052-CDS-H-paniculata_contig12887:4658..48921622929014.7459052-CDS-H-paniculata_contig12887:4658..4892Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 4659..4892 -
1691480699.638931-CDS-H-paniculata_contig12887:4658..48921691480699.638931-CDS-H-paniculata_contig12887:4658..4892Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 4659..4892 -
1622929014.7633283-CDS-H-paniculata_contig12887:5155..52831622929014.7633283-CDS-H-paniculata_contig12887:5155..5283Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 5156..5283 -
1691480699.6463358-CDS-H-paniculata_contig12887:5155..52831691480699.6463358-CDS-H-paniculata_contig12887:5155..5283Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 5156..5283 -
1622929014.779027-CDS-H-paniculata_contig12887:5558..57771622929014.779027-CDS-H-paniculata_contig12887:5558..5777Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 5559..5777 -
1691480699.6540916-CDS-H-paniculata_contig12887:5558..57771691480699.6540916-CDS-H-paniculata_contig12887:5558..5777Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 5559..5777 -
1622929014.7937217-CDS-H-paniculata_contig12887:6839..70651622929014.7937217-CDS-H-paniculata_contig12887:6839..7065Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 6840..7065 -
1691480699.661439-CDS-H-paniculata_contig12887:6839..70651691480699.661439-CDS-H-paniculata_contig12887:6839..7065Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12887 6840..7065 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12887.1811.1

>prot_H-paniculata_contig12887.1811.1 ID=prot_H-paniculata_contig12887.1811.1|Name=mRNA_H-paniculata_contig12887.1811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bp
VTNNGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSP
FRLTISGPQTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVAN
AERGVLRSGWVFQPQDCVHETFRYHDIMTSAALEEETWVLVLGTSILRGV
FSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHA
TNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPT
MIVAPSHLAAARNPNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGN
PTVQDLDRINPTLPAAPVEFNSTDFVNRMEQYQAKDGRVEFISAFPV
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mRNA from alignment at H-paniculata_contig12887:3449..7065-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12887.1811.1 ID=mRNA_H-paniculata_contig12887.1811.1|Name=mRNA_H-paniculata_contig12887.1811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3617bp|location=Sequence derived from alignment at H-paniculata_contig12887:3449..7065- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGACGAATAACGGCGATGGGACTCTTACGGCTACATATAAGAGTGATTT TCCGGGGGACTACCTCATTTACATTGAAGATATTGATCTCACGATGAAGA GCGAGAATGGATGGGGAAAAGACAATAATCGGCCGGTCACAGGGAGCCCA TTTAGGCTGACGATTTCGGGTCCCCAAACCCTCGACTTGAAAAATCTACC GGCCTGTTCGACCCTGGATAAAGACGGTGAGAGCTGCGCTTTTAAAATAC GGGCTTTTCAGACAGTGTGCGAAGCGCAACTCGCGATAACTCTGGATCAT GGATCCATATCGTCAAGATAGCTCGTTGGATGCGTAGGTTGTCTTCGATG AAGCGACTGACTGTAAGTCGAGGATTCGCGAGTGAAGAAAGGAAGTGACT ACACGGGTGGACTGTAGTCATGCTCCATTGTCACTCGGGGCTAGTGCGAG TTGGTATGTAAAACCACGGTCATACCCGCATCATCTCTCTCGTACAGCCA ACGATATAGGTGAAGATCGTTGCTTTCCGTGGAGCGTACACGATGCAAAA AGCCTCGAGTGTGGCTACTGGTGATAGTACCCAGCTCACGGTGTACTGTG CTCTTGTGTTTTCATCGGCAGTCTTTCAATGGACAGATGTGATGAATCTT TTTTTCCGAATTTACAGATGTCGATGGGGAGGAGTGTAGTGTAGGGTTCA CACACCACAACTCTAGAGTTAAAAGCGAATCAAAAGTAGAAGCAGATTAT TTTGCGGTAGAAAATACGACAATATCCCTACAAAAATGGATTAATGCTCG ACGTCCTTAAGCTGCTGGATTACTCATACATACACAAAATTCGACGAAGC TAAGGGTTCTTACACTTGTGTTCGGTCGGGGGTCTACTGTGTGGATGGGA TGAATAGTATCATTTGCGTTGGCCTGGAATTGACTCAGAAAGGAATTCAC ATGTGTAGCATCACGTACGACAGTAGTCTCGCCCGAAGGCATCACATACT AGTGTCACCCGTCTAGCTACTTACCAAGGCAGTGATGAAAATTATCATCA CTGAAAGGAGTGAGAACCTCTGAATGTCTTTGGCCGCAAGTCGCCGGCTG GCAACAACCACTCTCGTCCCCTCGTCAGTTGACACCTAAATTTGAGTTCC GACTCAATGAATGCCTCGTATTTCTGTAGTCCCCCCCCCCCCCTGTCTGC GATTTTAGGAGGAACCAACTATCGCGTATGGCGAAAACCGTACCTTCTGC GCTGCCACCCCTCTGTCTTGTCTTGGCCATACCATCAGCCGACGGAGAGT ACGGCGGGATAGCTGCGGCATTTTGGAAAAAGGGGACTTGGATTTCTTCG AATGTCGCCAATGCCGAACGTGGTGTACTGAGGAGCGGGTGGGTGTTTCA ACCCCAAGATTGCGTGCACGAGACATTCAGGTACCATGACATCATGACCT CAGCCGCGCTGGAGGAGGAGACGTGGGTGTTGGTGCTGGGCACGTCGATA CTTCGAGGTAAGTGTGCGCGTGTGTACAACGGTGCATATTCCTTACGGAC GGACTAGACATTCGCTAATATACCACGCATGTTTTGGAAACATAGGTCAC TTGAAATATCCCGTGAACCAGGATAGACCCCGATGTACAATAGAGAGTAA TTCGGCACATGCAGGTTTGCAGAATTAGGTAATTGGCCGCCTGTCACTCT GACGCTTGAGAATGACCAATCCGATTGATCTACCATCTAACGTACCGACA GGCGTTTCGACTATCTTATGAACTGGATGTAGGTGTCTTCTCGTCCTTGA TCGATTTGGCGCTTGCACAAGGGCAAAAGACCGACATACACAACTCCAAA GTATGGCAATGCTGGGGATGGGTCGATATCCGCATTGGAAGTCTCCGCAT CACCTACCAGGTTCGCCGTGCATGAGTCAATGTATCAGAGGACGTTGGAA GCGTTTTCGCAAAGGTGTGAAACTGACAACGCGTGGGTTCGGGCTTGGTC CAGCGAATATGGTCAACACTCGGCGAACAGTGGTCGAGAGCACTGAAGGT GACGTTATACGCATCACAACGTTTGATCCCTGAAAGCCGTATCGCCTCCC TCCCCATAGCAGGTCGTTCAATTGCGTCGCCTTCCGCGCTCGGTCCTGCA TGGAATGCCTCTCTTTTTCCTAGGACATGCGGCTTTGGTATTACCACGCA ACAAATGACAAAGTCGTCTGCCACAACGAAAAGCTCGCTAGCGATAGCAC AGCGAGTTACGTGCAATCTGCGAAATACCTGTTGGAGAACTACATTTTCG GTTCAGATCGCCAAGCAGAAGACGGCGGTGCAGCAAGGACATGGCCGACC ATGATCGTGGCTCCCTCTCATCTAGCGGCAGCGCGAAATCCCAATCTTGC CATCGAGGTGAGCCGCTGAGGGTGTCGACCATTGCTTGTACGGTTGGCTC ACGGCGCGCTTCTCCCGCAGACGCAGCGGCTCCATCTCACCAATGCTGTG CTCCATACTGTTTTGCCATGCCGAAGCTACTTTCTGTTTTGTTCATAGGT GACCATGAATGCCCTTCCTCAGGAGTGGGATGGCACTCTTCTGTTTCTGG ACCACATGGCCGGCTTTGTGAGTACCGGCTGTACAGAGTGCATATCTACA CGTACGGGTGACCCACCTTGGGTTTGCTCGCCCTCTGTTGCCATTTCGAG AATTTTGCAAAATTTATGCAAGAAATATACGGATGTTGACCCACATGTAA TTCAAGGAAGTAGAATGGATGAGGTGTACACGCCGCGTATCAAAGAGGTT GATATCGTTCAAGAAACCCTCCGCAAAAGGCCAAAGCGATTTCATCATGC AGCGAATGCGATTTGCAGGTTCTCACCGTGATGACCAAGGGTTATTCCTA GCAGGGGCGTTTTTTTGCTGAAAAAGAGAAATTCGGTAATTATCAGATTT TTCGGGCGCTCAAAGAAGAGTCAAAATATCCTAAATATATATATATATAT ATATATATATATATATGTGATTTTTATTTTATTTTTTGTATAAATATTTG ATGAACAACATGGTTGACAGTTCTGTTGAATAAATTTTTTGTCTCTTGTA TGATAAAATGAAAATCTTGTAGTCGACAAATTTCCGTTTTTCTGCCAAAA TAGTGCCCTCTAGGAATGAAAGACCCAAGATACCGTCCCGTGTGTTGTCA TTAAAGCAGTAAGGTTCAAGAGAGATTGCGAGATAGGGGATTCTGTGATC ATACTGCGCACTCCTCTCGAGAACGGACAGGTTTCATGAGCTTTCAAATC TTTTCAATTTTCTGCTGCAATAGCATGCCGTAATTTTGGGTTAGGGTTAG GGTTATTGTACCAATGTTGTTTCTCGAGAGGAGAGGAAGGCAGCACGCTT TGAACTAACTGCCCGGTTTCCGTGCGGCCATCCCATGCGAGACCTTCGGC AGAACTTCTACTGGAATTGGGGCAACCCCACCGTGCAGGACTTGGACCGC ATAAACCCTACCCTGCCCGCAGCCCCCGTCGAATTCAACAGCACTGACTT TGTGAACCGAATGGAACAGTACCAAGCGAAAGATGGGCGTGTGGAGTTCA TCAGCGCGTTTCCCGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig12887:3449..7065-

>mRNA_H-paniculata_contig12887.1811.1 ID=mRNA_H-paniculata_contig12887.1811.1|Name=mRNA_H-paniculata_contig12887.1811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2082bp|location=Sequence derived from alignment at H-paniculata_contig12887:3449..7065- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGACGAATAACGGCGATGGGACTCTTACGGCTACATATAAGAGTGATTT
TCCGGGGGACTACCTCATTTACATTGAAGATATTGATCTCACGATGAAGA
GCGAGAATGGATGGGGAAAAGACAATAATCGGCCGGTCACAGGGAGCCCA
TTTAGGCTGACGATTTCGGGTCCCCAAACCCTCGACTTGAAAAATCTACC
GGCCTGTTCGACCCTGGATAAAGACGGTGACGAATAACGGCGATGGGACT
CTTACGGCTACATATAAGAGTGATTTTCCGGGGGACTACCTCATTTACAT
TGAAGATATTGATCTCACGATGAAGAGCGAGAATGGATGGGGAAAAGACA
ATAATCGGCCGGTCACAGGGAGCCCATTTAGGCTGACGATTTCGGGTCCC
CAAACCCTCGACTTGAAAAATCTACCGGCCTGTTCGACCCTGGATAAAGA
CGCCGACGGAGAGTACGGCGGGATAGCTGCGGCATTTTGGAAAAAGGGGA
CTTGGATTTCTTCGAATGTCGCCAATGCCGAACGTGGTGTACTGAGGAGC
GGGTGGGTGTTTCAACCCCAAGATTGCGTGCACGAGACATTCAGGTACCA
TGACATCATGACCTCAGCCGCGCTGGAGGAGGAGACGTGGGTGTTGGTGC
TGGGCACGTCGATACTTCGAGCCGACGGAGAGTACGGCGGGATAGCTGCG
GCATTTTGGAAAAAGGGGACTTGGATTTCTTCGAATGTCGCCAATGCCGA
ACGTGGTGTACTGAGGAGCGGGTGGGTGTTTCAACCCCAAGATTGCGTGC
ACGAGACATTCAGGTACCATGACATCATGACCTCAGCCGCGCTGGAGGAG
GAGACGTGGGTGTTGGTGCTGGGCACGTCGATACTTCGAGGTGTCTTCTC
GTCCTTGATCGATTTGGCGCTTGCACAAGGGCAAAAGACCGACATACACA
ACTCCAAAGTATGGCAATGCTGGGGATGGGTCGATATCCGCATTGGAAGT
CTCCGCATCACCTACCAGGTGTCTTCTCGTCCTTGATCGATTTGGCGCTT
GCACAAGGGCAAAAGACCGACATACACAACTCCAAAGTATGGCAATGCTG
GGGATGGGTCGATATCCGCATTGGAAGTCTCCGCATCACCTACCAGGACA
TGCGGCTTTGGTATTACCACGCAACAAATGACAAAGTCGTCTGCCACAAC
GAAAAGCTCGCTAGCGATAGCACAGCGAGTTACGTGCAATCTGCGAAATA
CCTGTTGGAGAACTACATTTTCGGTTCAGATCGCCAAGCAGAAGACGGCG
GTGCAGCAAGGACATGGCCGACCATGATCGTGGCTCCCTCTCATCTAGCG
GCAGCGCGAAATCCCAATCTTGCCATCGAGGACATGCGGCTTTGGTATTA
CCACGCAACAAATGACAAAGTCGTCTGCCACAACGAAAAGCTCGCTAGCG
ATAGCACAGCGAGTTACGTGCAATCTGCGAAATACCTGTTGGAGAACTAC
ATTTTCGGTTCAGATCGCCAAGCAGAAGACGGCGGTGCAGCAAGGACATG
GCCGACCATGATCGTGGCTCCCTCTCATCTAGCGGCAGCGCGAAATCCCA
ATCTTGCCATCGAGGTGACCATGAATGCCCTTCCTCAGGAGTGGGATGGC
ACTCTTCTGTTTCTGGACCACATGGCCGGCTTTGTGACCATGAATGCCCT
TCCTCAGGAGTGGGATGGCACTCTTCTGTTTCTGGACCACATGGCCGGCT
TTAACTTCTACTGGAATTGGGGCAACCCCACCGTGCAGGACTTGGACCGC
ATAAACCCTACCCTGCCCGCAGCCCCCGTCGAATTCAACAGCACTGACTT
TGTGAACCGAATGGAACAGTACCAAGCGAAAGATGGGCGTGTGGAGTTCA
TCAGCGCGTTTCCCGTGAACTTCTACTGGAATTGGGGCAACCCCACCGTG
CAGGACTTGGACCGCATAAACCCTACCCTGCCCGCAGCCCCCGTCGAATT
CAACAGCACTGACTTTGTGAACCGAATGGAACAGTACCAAGCGAAAGATG
GGCGTGTGGAGTTCATCAGCGCGTTTCCCGTG
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