mRNA_H-paniculata_contig12887.1811.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 338 bits (866), Expect = 5.080e-108 Identity = 164/348 (47.13%), Postives = 234/348 (67.24%), Query Frame = 1 Query: 1 VTNNGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALEEETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARN-PNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPAAPVEFNSTDFVNRMEQYQAKDGRVEFISAFPV 1041 V NNG+GTLTA Y+S FPGDYL+++ED++L ++ G G RP+ GSPF LT+SG +D+ LP C +GE +A+++W+ G+W+SSN+A GVLR GWVFQP+ CV+E F Y D+M A L+E W+L LG SILRG+F +++D+ALAQGQK + S V +CWG++DIRIG+LRI+YQD+RL+ + +D VC++EKLAS STA+YV SA+ L++ IF ++ WP++I APS++ + PNL I V M+ALP W GTL+ LD + G+ + WN GNPT+ L + P +P +S + RME+Y+ +D RV F+SAFP+ Sbjct: 137 VRNNGNGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRG----RPIIGSPFSLTVSGDPAVDVDALPVCG-----GEGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKP---------WPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSG--LERMERYRQRDPRVTFMSAFPM 464
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 318 bits (815), Expect = 2.360e-101 Identity = 167/348 (47.99%), Postives = 227/348 (65.23%), Query Frame = 1 Query: 10 NGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGP-QTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARNPNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPAAPVEFNSTDFV--NRMEQYQAKDGRVEFISAFPV 1041 + +GTLTATYKSDFPGDYL+++E++ SE G G P+ GSPF L I+G TLD+ +LP C + D DG IA FW+ GTW+S+NVA+A GV+R+GWVFQP+ CV +TF Y D+M A+ + E TW++V+G S+ RGVF +L+D+ALA GQK D+ S + +CWG+ D+R+G+LR+TYQDMRL+ D VVC+NEKL S ST+++V SAK L + +F Q WP I+APS+L +N N IEV M++LP W+G LLF+DHMAGF+ +W GNPT L + T TD V +M+ YQ +D RV F+SAFP+ Sbjct: 65 SNNGTLTATYKSDFPGDYLVHVEEV---QPSERGEGL----PIVGSPFSLKIAGDFPTLDVHSLPVCGSQD---DGSTD-IADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTVFRDGTQ---------WPATILAPSYLVPEKNVNHMIEVLMDSLPPSWEGKLLFVDHMAGFSIHWTQGNPTRAALKDVRITATGR----TPTDDVALRKMDGYQTQDPRVSFMSAFPM 388
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE) HSP 1 Score: 316 bits (809), Expect = 1.470e-99 Identity = 169/359 (47.08%), Postives = 227/359 (63.23%), Query Frame = 1 Query: 10 NGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGP-QTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARNPNLAIE------------VTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPAAPVEFNSTDF-VNRMEQYQAKDGRVEFISAFPV 1041 + +GTLTATY+SDFPGDYL+++E++ + + E P+ GSPF LTI+G TLD+ +LP C + D DG IA FW+ GTW+SSNVA+A GV+R+GWVFQP+ CV +TF Y D+M A+L+ E TW++V+G S+ RGVF +L+D+ALA GQK D+ S + +CWG+ D+R+G+LR+TYQDMRL+ D VVC+NEKL S STA++V SAK L + F Q WP I+APS+L N N IE V M++LP W+G LLF+DHMAGF +W GNPT L + T A + DF + +M+ YQ +D RV FISAFPV Sbjct: 50 SNNGTLTATYQSDFPGDYLVHVEEVQPSKRGEG-------LPIVGSPFSLTITGDGPTLDVDSLPVCGSQD---DGSND-IADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTAAFVHSAKEFLASTAFRDGTQ---------WPATILAPSYLVPENNVNQMIEAYIRPASCAHAQVLMDSLPPSWEGKLLFVDHMAGFRIHWTQGNPTRTALMDVRIT---ATGRTPTDDFALRKMDGYQTQDPRVSFISAFPV 385
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE) HSP 1 Score: 310 bits (795), Expect = 1.290e-97 Identity = 163/347 (46.97%), Postives = 229/347 (65.99%), Query Frame = 1 Query: 16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQ-TLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYHATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAAR--NPNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPA-APVEFNSTDFVNRMEQYQAKDGRVEFISAFPV 1041 DGTLTATYKSDFPG+Y ++IE++ L+ K E P+ GSPF LTI+G TL++ +LP CS+ D+DA+ + IA FW+ GTW+SSNVA+A GV+R+GWVFQP+ CV +TF Y D+M A++ E TW+LVLG S+ RGVF +LID+ LA GQK I +S + +CWG+ D+R+G+LR+TYQDMRL+ + + D V C+NEKL S+ST++ V SA L + +F +DGG WPTM++A S L R + ++EV M+A+P W+G L F+DHMAG YW NPT+ L + +P + N + +M+ YQ +D RV F+S FP+ Sbjct: 129 DGTLTATYKSDFPGNYSVHIEEVQLSKKGEGV-------PILGSPFSLTIAGDAPTLNVNSLPVCSS-DEDANTD---IADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQDMRLFRFTISTDSVACNNEKLTSESTSALVHSAGQFLASTVF------QDGGQ---WPTMMMAASRLIPTRAEHTQFSVEVLMDAMPPSWEGKLFFVDHMAGLGNYWTEENPTMTALKNVGIWFDRMSPDDDNG---LGKMDGYQTRDPRVSFMSVFPM 452
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 305 bits (781), Expect = 2.150e-97 Identity = 157/355 (44.23%), Postives = 228/355 (64.23%), Query Frame = 1 Query: 1 VTNNGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGK----DNNRPVTGSPFRLTISGPQTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAA-LEEETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWYYH-ATNDKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARNP-NLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPTLPAAPVEFNSTDF-VNRMEQYQAKDGRVEFISAFPV 1041 V +NGDGTLTATY+S +PGDYL++++D+ T S G GK + + + SPFRLTISG +D+ +LP C D E FW+ G+WISS A+A+ GVLR GWVFQP+ CVH+TF Y D+M A +E TW+L+LGTS+ RGVF +L+D+ LAQGQK+D S + +CWG+ ++R+G+LR+TYQD+RL A +D VCH++KLA ++ A +V +A+ L +F + +Q WP++I+AP + + NL I V M+ALP W+GTLL ++HMAG F +N+ NPT L +NPT + +F D + R+++YQ +D R +F+S FP+ Sbjct: 22 VVDNGDGTLTATYESPYPGDYLVHVQDV-CTDMSVVGRGKKRPGERAKAIVDSPFRLTISGEIAVDVDDLPLCDAEHPQEDEED-----TFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQDLRLHEVGLAQDDSAVCHDDKLAINNVAVFVAAARRFLRRSVFAAGKQ---------WPSVIMAPPFMEDSDEAANLPITVIMDALPSAWNGTLLMMEHMAGLGFTYNYDNPTAATLAEVNPTWHLS--KFIGVDNGLGRIKRYQQQDARTKFMSTFPI 359
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE) HSP 1 Score: 256 bits (654), Expect = 2.470e-77 Identity = 154/389 (39.59%), Postives = 221/389 (56.81%), Query Frame = 1 Query: 16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQ-TLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQD--------------------------MRLWYYH---ATN---------------DKVVCHNEKLASDSTASYVQSAKYLLENYIFGSDRQAEDGGAARTWPTMIVAPSHLAAARNPNLAIEVTMNALPQEWDGTLLFLDHMAGFNFYWNWGNPTVQDLDRINPT-LPAAPVEFNSTDFVNRMEQYQAKDGRVEFISAFPV 1041 +GTLTATYKSDFPGDYL+YI++++ + K D P+ GSPF LTI+G TLD+ +LP CST D DA+ IA FW+ GTW+SS+VA+A GV+R+GWVFQP+ CV +TF Y D+M A+L+ E TW+LVLG S+ RGVF +LID+ LA GQK DI +S V +CWG+ D+R+G+LR+TYQ+ +R +H TN D +VC+NEKL S STA+++ SA+ L + IF +GG WPT+++APS+L + N +GT ++ + W NPT+ L+ + + L +P + N + +M+ Y+ +D RV F+S FP+ Sbjct: 26 NGTLTATYKSDFPGDYLVYIDEVESSKK-------DEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHD-DANKN---IADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQEAVTDGLGRELAISALEWRQFHRELCWLRQLLFHNEAETNIMLLFFTNAGLSNSVDSLVCNNEKLMSGSTAAFIHSAEQFLASTIF------REGGP---WPTVVMAPSNLIPSNN----------------EGTQFSVEEVL-----WKEENPTMTALEDVRMSYLSRSPDDDNG---LGKMDGYETRDPRVSFMSVFPM 370
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.310e-60 Identity = 102/188 (54.26%), Postives = 139/188 (73.94%), Query Frame = 1 Query: 16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQ-TLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQ 573 +GTLTATYKSDFPGDYL+YI++++ + K D P+ GSPF LTI+G TLD+ +LP CST +DA+ + IA FW+ GTW+SSNVA+A GV+R+GWVFQP+ CV +TF Y D+M A+L+ E TW+LVLG S+ RGVF +L+D+ LA GQK DI +S + +CWG+ D+R+G+ R+TYQ Sbjct: 122 NGTLTATYKSDFPGDYLVYIDEVESSKK-------DEGVPILGSPFSLTIAGDAPTLDINSLPVCST-HEDANKD---IADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQ 298
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 211 bits (536), Expect = 2.620e-60 Identity = 103/188 (54.79%), Postives = 138/188 (73.40%), Query Frame = 1 Query: 16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQ-TLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQ 573 +GTLTATYKSDFPGDYL+YI++++ + K D P+ GSPF LTI+G TLD+ +LP CST +D + + I FW+ GTW+SSNVA+A GV+R+GWVFQP+ CV +TF Y D+M A+L+ E TW+LVLG S+ RGVF +LID+ LA GQK DI +S V +CWG+ D+R+G+LR+TYQ Sbjct: 105 NGTLTATYKSDFPGDYLVYIDEVESSKK-------DEGVPILGSPFSLTIAGDAPTLDVNSLPVCST-HEDTNKD---IPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQ 281
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 207 bits (527), Expect = 1.010e-58 Identity = 104/199 (52.26%), Postives = 138/199 (69.35%), Query Frame = 1 Query: 1 VTNNGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGP-QTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALE-EETWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQDMRLWY 591 V + GTLTATYKSDFPGDYL+Y+E++ SE G G P+ GSPF L I+G TLD+ +LP C D DG IA FW+ GTW+SSNVA+A GV+R+GWVFQP+ CV +TF Y D+M A+L+ E TW++V+G S+ RGVF +L+D+ LA GQK DI S + +CWG+ D+ +G+LR+TYQD+ WY Sbjct: 136 VGDGNTGTLTATYKSDFPGDYLVYVEEV---QPSEQGEGL----PIVGSPFSLKIAGDFPTLDVNSLPVC---DSQEDGSND-IADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQDV-YWY 322
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 164 bits (415), Expect = 2.020e-43 Identity = 84/187 (44.92%), Postives = 113/187 (60.43%), Query Frame = 1 Query: 16 DGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPFRLTISGPQTLDLKNLPACSTLDKDADGEYGGIAAAFWKKGTWISSNVANAERGVLRSGWVFQPQDCVHETFRYHDIMTSAALEEE-TWVLVLGTSILRGVFSSLIDLALAQGQKTDIHNSKVWQCWGWVDIRIGSLRITYQ 573 +GTLTATYKSDFPG Y +YI++++L+ K N IA FW+ GTW+SSNVA+A GVLR+GWVFQP CV +TF Y D+M A+L++E TW+LVLG S+ RGVF +LID+ LA GQK DI +S + +CWG+ D+++G+LR+TYQ Sbjct: 62 NGTLTATYKSDFPGTYWVYIDEVELSRKDANN--------------------------------------------DIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQ 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12887.1811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12887.1811.1 >prot_H-paniculata_contig12887.1811.1 ID=prot_H-paniculata_contig12887.1811.1|Name=mRNA_H-paniculata_contig12887.1811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bp VTNNGDGTLTATYKSDFPGDYLIYIEDIDLTMKSENGWGKDNNRPVTGSPback to top mRNA from alignment at H-paniculata_contig12887:3449..7065- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12887.1811.1 ID=mRNA_H-paniculata_contig12887.1811.1|Name=mRNA_H-paniculata_contig12887.1811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3617bp|location=Sequence derived from alignment at H-paniculata_contig12887:3449..7065- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12887:3449..7065- >mRNA_H-paniculata_contig12887.1811.1 ID=mRNA_H-paniculata_contig12887.1811.1|Name=mRNA_H-paniculata_contig12887.1811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2082bp|location=Sequence derived from alignment at H-paniculata_contig12887:3449..7065- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |