mRNA_H-paniculata_contig1288.1806.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: D8LTD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD1_ECTSI) HSP 1 Score: 385 bits (989), Expect = 1.730e-127 Identity = 207/343 (60.35%), Postives = 252/343 (73.47%), Query Frame = 1 Query: 145 LFGNTFLTEDGIRSLIRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVMDRVARF-GPPENWTWR-DRRGRREGDLTVEALGLLRSTSREFQPLPR-GAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQL 1164 LF T L+E RS++ LRGGLP HR TAWKFLL+LP NS F +LV RGPHP A+A+LS RYPLR+R+LFRK AVL SALAHWSP+ E EFVP W+FPF VVF QDDLGAFEAA+SF LHWGSRLLVTFPQPPVPVLAGMELAL+R D +L+AH + +SVGAL YGWPLLR+AFS VL R +WL L+DR+LAN Q ELLEAA VGF+V+ R L S EAE+FF + R ST+ D+ +FRVM++V+ + PE + D G G+ + AL LLR +EF+PLPR G YP FDGYPQ+VINYQ+++R+RVA QE+D K++L Sbjct: 4 LFETTTLSEHDFRSMLHLRGGLPVEHRVTAWKFLLRLPGNSKQFAQLVSRGPHPTALASLSIRYPLRDRKLFRKAAVLLSALAHWSPILAEVEFVPSWLFPFCVVFGQDDLGAFEAAVSFFLHWGSRLLVTFPQPPVPVLAGMELALQRADRELAAHLKSLSVGALSYGWPLLRSAFSEVLAREEWLCLIDRILANAHQPELLEAAVVGFMVSFRKQLLVLESTEEAEAFFRR----RQSPSTS-----DLQRIFRVMEKVSSYVQQPERLGGQVDSDGADVGEA-MAALALLRIAPQEFKPLPRVGPYPFFDGYPQFVINYQAEMRQRVAAQERDMRHKYRL 336
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: A0A836CHE3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE3_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.170e-75 Identity = 146/351 (41.60%), Postives = 196/351 (55.84%), Query Frame = 1 Query: 178 IRSLIRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFH--QLPGDRSGGSTNGAKGVDVDEMFRVMDRVARFGPPENWTWRDRRGRREGDLTVE---ALGLLRSTSREFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKELDERAKYISSWESD 1215 +R+L+R G P HR AW+ LL LP N + F L RGPH A +++R+PLR+RR K L SALAHWSPV+GEAE VP VFPF+ F+ +DL AFE AM+ L WG LVTFPQPPVPVL G+E ALRR D +L+AH K ++YGW LLR+ FS VL WLRL D + A +LL A V F +A+R SL RS + E+F+H Q+PG + VM++ P+ + + AL L RS F PLP+G YPAF+GYPQ+V+++Q + R RVA + + L ++L +R + + E + Sbjct: 60 LRALLRAHGAFPAPHRPLAWRLLLSLPRNRAAFAALTARGPHAAAARHIAQRFPLRSRRDAAKLTALASALAHWSPVFGEAENVPAVVFPFLRAFRGNDLAAFECAMTVLTWWGRAWLVTFPQPPVPVLVGIEAALRRHDARLAAHLRKCGADTVVYGWSLLRSIFSEVLAGDAWLRLWDHIFAAAHDPQLLNTAVVAFAIANRDSLLAARSRADVEAFYHSQQVPGS--------------SRLLHVMNKADASSQPQRHSDAATAAAVSDAAAAQRSVALLLQRSPQSAF-PLPKGGYPAFEGYPQFVLDWQLEERRRVAGEVGALAERRALAEQLRDRTRALEREEEE 395
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: A0A5D6Y0G4_9STRA (TBC1 domain family member 31 (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0G4_9STRA) HSP 1 Score: 208 bits (529), Expect = 7.660e-55 Identity = 122/342 (35.67%), Postives = 177/342 (51.75%), Query Frame = 1 Query: 202 GGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVM-------DRVARFGPPENWT-WRDRRGRREGDLTVEALGLLRSTSREFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKELDERAKYISS 1203 G P+ +R W+FLL+LP N F LVR+G HP A L + YPLR+ RLFR+ + SA+A W P +GEA ++P V+PFV VF+ +DL AFEA++S LLHW L + P P VL ++ AL+R DPQL AHF++ V A +YGW LL+T F+ VL+ +WL L D L + +LL A + +V R +L + FFHQ ++V ++M D A P W + PLPRG YPAF YP++V+++Q R R+AL+E + RK QL+ ++++ + + Sbjct: 474 GVYPKKYRLLVWRFLLRLPKNEEAFRSLVRKGKHP-AFVRLGELYPLRDARLFRRLHRVLSAVAFWCPAFGEASYLPALVYPFVKVFRANDLAAFEASLSVLLHWCGDFLESLPHAPGRVLGTLDRALQRRDPQLYAHFQQHQVTADVYGWSLLKTIFTEVLSEDEWLTLWDHLFTHAATPQLLYTAVLAYVSYFRTALLGACDRVSIDQFFHQQ------------NAMNVQSFVQLMLNLSQSIDATAFESPDGAWEEXXXXXXXXXXXXXXXXXXXXXXAAVSHWPLPRGQYPAFARYPKFVVDFQISERHRIALEESELVRKQQLLDAIEKQCAQLKA 802
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: A0A1W0A9R1_9STRA (TBC1 domain family member 31 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9R1_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.820e-54 Identity = 121/353 (34.28%), Postives = 189/353 (53.54%), Query Frame = 1 Query: 154 NTFLTEDGIRSLIRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLA---NPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVMDRVARFGPPENWTWRDRRGRREGDLTVEALGLLRSTSREFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKELDERAKYISS 1203 N L + + L+R PE +R AW++LL+LP N F L+ +GPHP + L K+YP+ N+RLFR+ + SA+A+W P +GEA+++P VFPFV V + +DL AFE ++FLLHWG LV +P PP+ +L +E L R DPQL HF ++ + YGW L+R+ FS VL+R++WL L D L+ +PG+ + +A + F+ SR+ + N S ESFFH + VD+ + ++++ L ST PL +G YP F YP +V++YQ + R R+A +E + K L+ +L ++ + + + Sbjct: 419 NVQLQKKRLAQLLRSYQAYPERYRMLAWRYLLELPENMDAFTALLNKGPHPSFIR-LEKQYPIHNQRLFRRLQRVLSAIAYWCPAFGEADYLPSLVFPFVKVCENNDLMAFEVTLTFLLHWGRDFLVRYPYPPLHLLRVLEKELERRDPQLYLHFVDHNIQSETYGWSLVRSVFSEVLSRSNWLCLWDHLVTAFEDPGR---IWSAVLAFLQISRSIILNLSSTVALESFFHTQ------------QSVDMRLLIEWLEQM-----------------------TFPLPAPLSTDPALVPLAKGNYPVFRQYPHFVVDYQIEERNRIAREEAELAAKESLLFQLQKQTEALEN 732
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: UPI0014026439 (TBC1 domain family member 31 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014026439) HSP 1 Score: 202 bits (515), Expect = 2.470e-52 Identity = 123/342 (35.96%), Postives = 174/342 (50.88%), Query Frame = 1 Query: 151 GNTFLTEDGIRSLIRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVMDRVARFGPPENWTWRDRRGRREGDLTVEALGLLRSTSREFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKEL 1176 G L + +L++ G P +R W+ LL+LP N + LV +G HP A L + YP+R+ +L R SALAHW+P++GE EF+P FPFV +FQ + L FE + L++W SR FP PP+ VLA +E AL D QL HF + V A +Y WPLL T FS VLTR +WLRL D +L+ P L A A + +R +L + + FFH G VDV + R R+ P + + G E +FQPLPRG YP F+ YP+ V+ + ++ R+R+ QE + R+ Q++ EL Sbjct: 415 GEEVLDRRRLLALLKGFGEYPAKYRLFIWRALLRLPENHDVYNTLVEKGTHP-AYGALHRHYPVRSHKLLRGLQRTLSALAHWAPIFGETEFLPLLAFPFVKLFQNNQLVCFEVLATVLVNWCSRWFEYFPNPPLNVLACVENALAHHDHQLLQHFVEHGVTAQVYAWPLLETLFSEVLTRDEWLRLFDWVLSRPPA--FLPAVAAAYSSCARGALLRLTQLEDFQFFFHHRGG------------VDVGRLLREAQRLLDTAPQDA---------QPGPAAEE----------QFQPLPRGLYPVFNKYPESVVQFHARERDRICAQELEYLREKQVLHEL 722
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: A0A0P1AR41_PLAHL (TBC1 domain family member 31 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AR41_PLAHL) HSP 1 Score: 201 bits (511), Expect = 1.090e-51 Identity = 113/338 (33.43%), Postives = 180/338 (53.25%), Query Frame = 1 Query: 184 SLIRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVMDRVARFGPPENWTWRDRRGRREGDLTV-----EALGLLRSTS--REFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKEL 1176 S +++ G P+ +R W+FLL+LP N F LV +G HP V L +RYPL+N R++R+ + SA+ +W P +GE ++P V+PFV +F+++DL AFEA++ LLHW L+ P PP+ + +E L R D QL HF + + + +Y W LL+T F+ VL+ +W+ L D L A +L+ A + ++ R +L + E FFHQ +D+ + +++ + R + DL+V + STS R F PL RG YPAF YPQ+V+++Q R R+AL+E + RK L++++ Sbjct: 492 SSLKVNGKFPKKYRALIWRFLLRLPKNEEAFRSLVAKGKHPTFVR-LKERYPLQNSRIYRRLHRILSAIVYWCPAFGEVSYLPAMVYPFVKIFKENDLAAFEASICVLLHWCGDYLINLPCPPLLAMRAIESELARRDGQLHDHFTRYQITSEVYAWSLLKTIFTEVLSEEEWMCLWDYLFAYSDAPQLIYVAVLAYLSYYRTALLAACNRLSIEQFFHQQ------------NAIDIQKFVQLVINL----------------REKLDLSVYTAINDPTATDHSTSGHRSFWPLSRGQYPAFAHYPQFVVDFQISERNRIALEEAELARKQDLLEQI 800
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: A0A6G0WSY0_9STRA (TBC1 domain family member 31 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSY0_9STRA) HSP 1 Score: 199 bits (507), Expect = 3.470e-51 Identity = 119/350 (34.00%), Postives = 182/350 (52.00%), Query Frame = 1 Query: 178 IRSLIRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVMDRVARFGPPENWTWRDRRGRREGDLTVEALGLLRSTSREFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKELDERAKYISS----WESD 1215 ++ L+ G PE +R AWK+LL+LP N++ F L+ +G HP A+ L + YP++N+RLFR+ + SALA W P++GE + VP VFPFV V +DL AFE +S LLHWG ++ +P PP L ++ L+ DPQL AHF + YGW L+ TAFS VLTR DWL L D L A + LL AA + F+ R++L + S+ ++ F Q ++ +++ + +V+ + D T ++ PL G YP F YP +V++YQ + R R+A +E E K L+ +++ R + + W +D Sbjct: 386 LQQLLGSYGRFPEKYRLLAWKYLLRLPENNATFEHLLAKGDHP-AMLRLHETYPIQNQRLFRRLKRILSALAFWCPIYGEVQSVPALVFPFVKVCANNDLVAFEVVLSVLLHWGRDFVLQYPHPPRHQLLRLDQTLQERDPQLHAHFSSHQISPEDYGWSLVSTAFSEVLTRDDWLCLWDNLFAFWDKPSLLWAAVLAFLHQVRSTLLHASSSTAIQATFRQQQPIQTKHFIANLHSIEMTTLAKVVG--------------------DDDAT------------KYFPLSLGQYPVFKRYPSFVVDYQIQERNRIASEEAAIEAKRNLLAQIESRTRELEQAHKKWMND 702
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: A0A662XRJ0_9STRA (TBC1 domain family member 31 (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRJ0_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.350e-50 Identity = 115/333 (34.53%), Postives = 175/333 (52.55%), Query Frame = 1 Query: 190 IRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVMDRVARFGPPENWTWRDRRGRREGDLTVEALGLLRSTSREFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKELDERA 1188 ++ G P+ +R W+FLL+LP N F LV +G HP V L +YPL+N R+FR+ + SA+ +W P +GE ++P V+PF+ +F+++DL AFEA++S +LHW LV+ P PPV VL+ +E L R D QL HF + V + W LL+T F+ VL+ +WL L D LL P ELL A + ++ R +L E FFHQ + N K V + R +++F ++ T G EG + PLPRG YPAF YP++V+++Q +R + E K +L+ +++E + Sbjct: 229 LKCNGVYPKKYRVLVWRFLLRLPKNEEAFRSLVAKGKHPAFVG-LKTQYPLQNDRIFRRLHRVLSAITYWCPAFGEVSYLPAVVYPFIKIFRENDLAAFEASISVMLHWCGSFLVSLPYPPVFVLSALEKELERRDAQLYDHFLQYGVTPEAFAWSLLKTIFTEVLSEDEWLCLWDHLLTYPDTPELLFVAVLAYLAYFRTALLAASDRFSIEQFFHQQ------NAINVQKFVQLLMNLREKLDLSKFSLTQDSTEASNSG--EGRAP-------------YWPLPRGQYPAFANYPRFVVDFQISVRAEL-------EHKQKLLDQVEEES 532
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: A0A833SDS8_PHYIN (TBC1 domain family member 31 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SDS8_PHYIN) HSP 1 Score: 196 bits (499), Expect = 4.010e-50 Identity = 112/333 (33.63%), Postives = 174/333 (52.25%), Query Frame = 1 Query: 190 IRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLELLEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVMDRVARFGPPENWTWRDRRGRREGDLTVE--ALGLLRSTSREFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKELDE 1182 +++ G P +R W+FLL+LP N F LV +G HP V L YPL++ RLFR+ L SA+ +W P +GE ++P V+PFV +F+++DL AFEA++S LLHW L++ P PPV L +E L R D QL HF + + + + W LL+T F+ VL+ +W+ L D L A +L+ A + ++ R +L E FFHQ +D+ + ++M + R++ E + A G S R + PL RG YPAF YP++V+++Q R R+AL+E + RK L ++++ Sbjct: 499 LKVSGMFPRKYRVLVWRFLLRLPKNEEAFRSLVAKGKHPVFVR-LKDHYPLQDGRLFRRLHRLLSAIVYWCPAFGEVSYLPAVVYPFVKIFRENDLAAFEASISVLLHWCGDFLISLPYPPVFALRAIEHELARRDSQLFDHFTRYQITSEAFAWSLLKTIFTEVLSEDEWMCLWDHLFAFSDTPQLIYVAVLAYLSYFRTALLAACDRFSIEQFFHQQ------------NAIDIQKFVQLMMNL-----------REKLDLSEFSAIEDPAAAGSTTSAHRPYWPLSRGQYPAFAHYPRFVVDFQISERNRIALEEAELARKQSLFDQIEQ 807
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Match: A0A067BZ66_SAPPC (TBC1 domain family member 31 n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BZ66_SAPPC) HSP 1 Score: 196 bits (498), Expect = 5.020e-50 Identity = 121/342 (35.38%), Postives = 180/342 (52.63%), Query Frame = 1 Query: 178 IRSLIRLRGGLPEAHRFTAWKFLLKLPCNSSCFLELVRRGPHPGAVATLSKRYPLRNRRLFRKTAVLTSALAHWSPVWGEAEFVPGWVFPFVVVFQQDDLGAFEAAMSFLLHWGSRLLVTFPQPPVPVLAGMELALRRIDPQLSAHFEKISVGALIYGWPLLRTAFSHVLTRADWLRLLDRLLANPGQLEL--LEAAAVGFVVASRASLRNCRSAREAESFFHQLPGDRSGGSTNGAKGVDVDEMFRVMDRVARFGPPENWTWRDRRGRREGDLTVEALGLLRSTSREFQPLPRGAYPAFDGYPQYVINYQSKLRERVALQEQDAERKHQLIKELDERAKYI 1197 + L+R PE +R AW+FLL+LP N+ F L+++G HP + L+++YP++N+RLFR+ + SA+AHW P +GE E++P +VFPFV V + +D+ AFE +S LL G L +P PP+ +L +E L R DPQL HF + A +YGW L+ TAFS VL R DWL L D LL PG + L AA + F+ SR L +C S+ ++F Q +M + +D + + P L + F PL +G+YP F YP +V++YQ + R R+A +E D K L+ +L + K + Sbjct: 454 LAHLLRSYEMYPERYRMLAWRFLLELPENTDAFSLLLQKGVHPSCLH-LARQYPIQNQRLFRRLQRVLSAVAHWCPAFGEVEYLPAFVFPFVKVCENNDVMAFEVVVSLLLFDGVDFLRRYPYPPLHLLRLVEKELERRDPQLYLHFVSHHIQADVYGWSLVNTAFSTVLQRRDWLYLWDHLL-TPGFQDAGRLWAAVLAFLQLSRHVLLDCTSSTAILAYFEQQ---------------QTLDMRQFVDWMRQMSFP--------------------LPRTNEDDKAFVPLQKGSYPRFQHYPHFVVDYQIQERNRIAREEDDLAAKQALVAQLQAQTKAL 758 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1288.1806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1288.1806.1 >prot_H-paniculata_contig1288.1806.1 ID=prot_H-paniculata_contig1288.1806.1|Name=mRNA_H-paniculata_contig1288.1806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=417bp MALNLFGNTFLTEDGIRSLIRLRGGLPEAHRFTAWKFLLKLPCNSSCFLEback to top mRNA from alignment at H-paniculata_contig1288:9727..14503- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1288.1806.1 ID=mRNA_H-paniculata_contig1288.1806.1|Name=mRNA_H-paniculata_contig1288.1806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4777bp|location=Sequence derived from alignment at H-paniculata_contig1288:9727..14503- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1288:9727..14503- >mRNA_H-paniculata_contig1288.1806.1 ID=mRNA_H-paniculata_contig1288.1806.1|Name=mRNA_H-paniculata_contig1288.1806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2502bp|location=Sequence derived from alignment at H-paniculata_contig1288:9727..14503- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |