|
Homology
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A6H5L608_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L608_9PHAE) HSP 1 Score: 541 bits (1395), Expect = 2.740e-184 Identity = 327/550 (59.45%), Postives = 385/550 (70.00%), Query Frame = 1
Query: 10 TVYAAALGLVIPVLGVSVFSKLWKHGRAALRGQKIREPEDGLGLGFVVRLSLLLAACFAFHRVASSMKMEPEHFDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAVLIGFVLSAKMGLDMLDPAGAPKKPRFEVTQEDVQALLNNLDDSSSTEDILECLAACPQLCSEERRALAEDMAPTTTPIRVRLAAR-GAALLLRSSATPPNAPEKNARSSGGKXXXXXXXXXXXXXXXXXXXNKGASSEIAEEAXXXXXXXXXXEQAKEAEQEFFSKGRRGEGNRKTTRSLPKLSQVVMHNLVVLLSALYREDVVVAADTAPAPAATGEGDEASQNGEVDDPSANIITTAAADAAGVAEASRA---LADEQEALFGLAEPLLDACLKVAARRASPQLFGTVVEAKAILRRRLWSSEDPEALSEQAREADVDLDAAVPRVKIDSVKVETWGESQVALGDTVTATITIIREHACEYRGFRRR 1647
T+YAA LGL+IPV+G+SV KLW HG A RG+ + + L + F+ ++ +L A+C+AF++VASSM+ E EHFDPYHIL+LPSRA N++VI+SHYRRLSLKHHPDKNPGNR AN +FN+VAKAYKALSDPEARRNWE+YGHPDGYQPW FDLALP WLRP KDTD GT+VLY + Y+AVL+GFVL AK+ LD+LDPAG K+P FEVT EDV+ALL+NLDD+SST D+LECLAACPQLCS ERR LA +M T P+R L R G A LR + XXXXXXXXXXXXXXXXXXX G S EE E + EFF++GRRGEGNR+T R P+LS+VV HNLVV+LSAL+R + + A A LA EQ+ +FGLAEPLLDAC++VAARRASPQL GTVVE KA+LRRRLWSSEDP AL Q E D+DLDAAVP +K+ SV VETWGESQVA+GDTVTATITI REHA EY+G RRR
Sbjct: 6 TMYAAGLGLIIPVVGISVCRKLWSHGLRAARGRAAPDGKGLLNVWFLGQVLVLGASCYAFNQVASSMQTEAEHFDPYHILDLPSRA-NATVIKSHYRRLSLKHHPDKNPGNRREANKKFNQVAKAYKALSDPEARRNWEQYGHPDGYQPWTFDLALPAWLRPGKDTDNGTLVLYGLAYMAVLLGFVLGAKVTLDLLDPAGGGKQPDFEVTDEDVKALLSNLDDTSSTADVLECLAACPQLCSAERRVLAGEMEAITDPVRDWLLEREGGAPPLRGPLSSSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGESPASGEEQSPAAAAAGTKG---EVDGEFFTQGRRGEGNRRTARESPELSRVVAHNLVVMLSALHRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGSRLLAAVSAGGRLAREQDLVFGLAEPLLDACMQVAARRASPQLLGTVVETKAMLRRRLWSSEDPAALERQREEVDLDLDAAVPSIKVKSVAVETWGESQVAVGDTVTATITIAREHAPEYQGLRRR 551
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A7S1B9Q5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9Q5_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.640e-21 Identity = 67/176 (38.07%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 229 FDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWL-RPSKDTDKGTMVLYAVGYIAVLIGFVLSAKMGLDMLDPAGAPKKPRFEVTQEDVQALLNNLDDSSSTEDILECLAACPQLCSEERRAL 753
FDP+ IL + + AN+++I+ YR+LSL HHPDK + F +VA AYKALSDP AR NW+K+GHPDG FD ALP+WL P T +VLY ++A++I + + D K V + D L L+D S+ ED+L +A P+ +++L
Sbjct: 106 FDPFEILGVAT-GANTTLIKRAYRQLSLVHHPDKG-----GSEETFQQVALAYKALSDPIARENWQKHGHPDGPVRASFDFALPSWLLHPQGITAIVLLVLYLGMFVAIIIYAIRTVAKN----DEDAVQKHQDMSVARPDQNYLQIMLEDKSTHEDVLYFIATTPENLHMAKKSL 271
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A7S1B8Q5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8Q5_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.820e-20 Identity = 67/176 (38.07%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 229 FDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWL-RPSKDTDKGTMVLYAVGYIAVLIGFVLSAKMGLDMLDPAGAPKKPRFEVTQEDVQALLNNLDDSSSTEDILECLAACPQLCSEERRAL 753
FDP+ IL + + AN+++I+ YR+LSL HHPDK + F +VA AYKALSDP AR NW+K+GHPDG FD ALP+WL P T +VLY ++A++I + + D K V + D L L+D S+ ED+L +A P+ +++L
Sbjct: 106 FDPFEILGVAT-GANTTLIKRAYRQLSLVHHPDKG-----GSEETFQQVALAYKALSDPIARENWQKHGHPDGPVRASFDFALPSWLLHPQGITAIVLLVLYLGMFVAIIIYAIRTVAKN----DEDAVQKHQDMSVARPDQNYLQIMLEDKSTHEDVLYFIATTPENLHMAKKSL 271
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A835YIF4_9STRA (DnaJ-like/ Sec63 translocase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIF4_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.350e-19 Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 1
Query: 145 FVVRLSLLLAACFAFHRVASSMKMEP---EHFDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAVLIGFV 567
F+ +++ L+ + + SSM E FDPY IL + A ++ RS YR LSLK+HPDKNPGN+ A ++ F K+AKAY+AL+DP AR N+ KYG+PDG QP +ALPT+L KD ++LY + + V+ V
Sbjct: 74 FLGKVASLVIGWAIVYVLLSSMTGESVGLAQFDPYAILGVDVGADTKAIKRS-YRNLSLKYHPDKNPGNKVAEDM-FMKIAKAYEALTDPVARENYIKYGNPDGKQPMAVSIALPTFLL-DKDYHNSILILYLIAMVIVIPSLV 214
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A1Z5KQ30_FISSO (Translocation protein SEC63 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ30_FISSO) HSP 1 Score: 102 bits (254), Expect = 3.120e-19 Identity = 58/144 (40.28%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 142 GFVVRLSL--LLAACFAFHRVASSMKMEPEHFDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAVLIGFV 567
GF++ L + +L F + ++ S + FDP+ IL++ + A N ++ ++ YR LSLK+HPDKNPG+R AA F V+KAY+AL+D AR NWEKYG+PDG Q + LP++L SK+ + +V Y + + ++ FV
Sbjct: 73 GFLINLGITSVLTLIFIWLLISVSQDGQVNSFDPFSILQIDAGADNKTIKKA-YRSLSLKYHPDKNPGDR-AAEAMFMMVSKAYEALTDETARENWEKYGNPDGKQSLEVSIGLPSFLLDSKNRNL-VLVAYLLFMVVLIPYFV 213
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A5B8MZS8_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZS8_9CHLO) HSP 1 Score: 102 bits (255), Expect = 3.160e-19 Identity = 70/154 (45.45%), Postives = 93/154 (60.39%), Query Frame = 1
Query: 100 RGQKIREPEDGL-GLGFVVRLSLLLAACFAFHRVASSMKMEPEHFDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQF-NKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAVL 555
RG+K E + G G V L+LL A + + E + FDP+ ILELP+ +A I+S YR+LSLK+HPDKNP AA+ F N V+KAYK L+D AR NWEKYGHPDG F +ALPT+L +D +K +++L +G I L
Sbjct: 46 RGRK--EKKKGFFGSRSNVVLTLLWLAILSLSIYIAYSSEEDQKFDPFEILELPT-SATKKQIKSAYRKLSLKYHPDKNPDP--AASEFFSNFVSKAYKTLTDETARENWEKYGHPDGPSSTKFGVALPTFLF--RDNEKASIIL--LGLIVAL 190
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: B7FXR6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXR6_PHATC) HSP 1 Score: 100 bits (250), Expect = 9.740e-19 Identity = 58/162 (35.80%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 100 RGQKIREPEDGLGL----GFVVRLSLLLAACFAFHRVASSMKMEPE--HFDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAVLIGFV 567
+ ++++ + G+ + GF++ + + LA F + + + E FDP+ ILE+ ++S I+ YR LSLK+HPDKNPGNR AA +F V+KAY+ L+D A+ N+EKYG+PDG Q + LP++L DT+ +VL Y+ +++G +
Sbjct: 55 KADQLKKSQKGMSVLHSQGFLINVGITLALSMLFVWLLFMVSQDGEVNSFDPFSILEI-DHGSDSKSIKKAYRNLSLKYHPDKNPGNR-AAEAKFMMVSKAYETLTDETAKENYEKYGNPDGKQSLEVSIGLPSFLL---DTNNRNLVLMV--YLVIMVGVI 209
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A2P6MQT7_9EUKA (Translocation protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MQT7_9EUKA) HSP 1 Score: 100 bits (249), Expect = 1.500e-18 Identity = 66/173 (38.15%), Postives = 94/173 (54.34%), Query Frame = 1
Query: 64 FSKLWK--------HGRAALRGQKIREPEDGLGLGFVVRLSLLLAACFAFHRVASSMK--MEPEHFDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAV 552
FSK +K H +A + R+P F L LL+ A F + + + K EP FDPY ILEL + A + I+S YR+LSLK+HPDKNP AA ++ ++AKAY L+DP+ + WEKYG+PDG Q + +ALP WL K+ + +Y + + V
Sbjct: 38 FSKAYKGECNCDACHTKAEATQLENRKPTKWAIFKF--GLYLLVWAVFLYLTINAYQKSSQEPVLFDPYKILEL-DQGATDAEIKSSYRKLSLKNHPDKNPSADAAA--RYTEIAKAYTTLTDPDTKEKWEKYGNPDGPQGFTMGVALPGWLVDGKNKSV-VLAIYVIFLVIV 204
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A2P6MXU6_9EUKA (Translocation protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MXU6_9EUKA) HSP 1 Score: 100 bits (249), Expect = 1.550e-18 Identity = 66/173 (38.15%), Postives = 94/173 (54.34%), Query Frame = 1
Query: 64 FSKLWK--------HGRAALRGQKIREPEDGLGLGFVVRLSLLLAACFAFHRVASSMK--MEPEHFDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAV 552
FSK +K H +A + R+P F L LL+ A F + + + K EP FDPY ILEL + A + I+S YR+LSLK+HPDKNP AA ++ ++AKAY L+DP+ + WEKYG+PDG Q + +ALP WL K+ + +Y + + V
Sbjct: 91 FSKAYKGECNCDACHTKAEATQLENRKPTKWAIFKF--GLYLLVWAVFLYLTINAYQKSSQEPVLFDPYKILEL-DQGATDAEIKSSYRKLSLKNHPDKNPSADAAA--RYTEIAKAYTTLTDPDTKEKWEKYGNPDGPQGFTMGVALPGWLVDGKNKSV-VLAIYVIFLVIV 257
BLAST of mRNA_H-paniculata_contig1287.1800.1 vs. uniprot
Match: A0A6H5GVH4_9HEMI (J domain-containing protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GVH4_9HEMI) HSP 1 Score: 100 bits (249), Expect = 1.570e-18 Identity = 63/152 (41.45%), Postives = 86/152 (56.58%), Query Frame = 1
Query: 109 KIREPEDG---LGLGFVVRLSLLLAACFAFHRVASSMKMEPEHFDPYHILELPSRAANSSVIRSHYRRLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGYQPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAVL 555
K EP G L V+ L L A A+ S E +FDPY IL +P ++ S + R+ Y+ LSL HHPDK G+ A F K+ KAYKAL+DPE+R+NWEKYG+PDG F +ALP+W+ K+ + LYA+ ++ L
Sbjct: 63 KSNEPWKGTKQLLTKLVIVLGWLCLALLAYK--VSQFDYEYANFDPYEILGVPMGSSMSEIKRA-YKTLSLTHHPDKKTGDEKA----FMKLNKAYKALTDPESRKNWEKYGNPDGPGAMSFGIALPSWIV-EKENSVWVLGLYALVFMVAL 206
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 506.9 |
Seed ortholog evalue | 1.2e-140 |
Seed eggNOG ortholog | 2880.D8LSY2 |
KEGG ko | ko:K09537,ko:K09540 |
KEGG TC | 3.A.5.8,3.A.5.9 |
KEGG Pathway | ko03060,ko04141,map03060,map04141 |
Hectar predicted targeting category | signal peptide |
GOs | GO:0001655,GO:0001889,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005794,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0010259,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0042175,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061008,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072001,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0098827 |
EggNOG free text desc. | posttranslational protein targeting to membrane, translocation |
EggNOG OGs | COG5407@1,KOG0721@2759 |
Ec32 ortholog description | Heat shock protein 40 like protein/ DnaJ domain containing protein |
Ec32 ortholog | Ec-26_001850.1 |
COG Functional cat. | U |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko02044,ko03110 |
Exons | 7 |
Model size | 1650 |
Cds size | 1650 |
Stop | 1 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1287.1800.1 >prot_H-paniculata_contig1287.1800.1 ID=prot_H-paniculata_contig1287.1800.1|Name=mRNA_H-paniculata_contig1287.1800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=550bp
MSDTVYAAALGLVIPVLGVSVFSKLWKHGRAALRGQKIREPEDGLGLGFV VRLSLLLAACFAFHRVASSMKMEPEHFDPYHILELPSRAANSSVIRSHYR RLSLKHHPDKNPGNRHAANVQFNKVAKAYKALSDPEARRNWEKYGHPDGY QPWIFDLALPTWLRPSKDTDKGTMVLYAVGYIAVLIGFVLSAKMGLDMLD PAGAPKKPRFEVTQEDVQALLNNLDDSSSTEDILECLAACPQLCSEERRA LAEDMAPTTTPIRVRLAARGAALLLRSSATPPNAPEKNARSSGGKGKGKG KGGGNGKNGGGGSGNKGASSEIAEEASGGGGGAAAVEQAKEAEQEFFSKG RRGEGNRKTTRSLPKLSQVVMHNLVVLLSALYREDVVVAADTAPAPAATG EGDEASQNGEVDDPSANIITTAAADAAGVAEASRALADEQEALFGLAEPL LDACLKVAARRASPQLFGTVVEAKAILRRRLWSSEDPEALSEQAREADVD LDAAVPRVKIDSVKVETWGESQVALGDTVTATITIIREHACEYRGFRRR* back to topmRNA from alignment at H-paniculata_contig1287:1666..10003- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1287.1800.1 ID=mRNA_H-paniculata_contig1287.1800.1|Name=mRNA_H-paniculata_contig1287.1800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8338bp|location=Sequence derived from alignment at H-paniculata_contig1287:1666..10003- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGAGTGATACAGTCTATGCTGCGGCGCTGGGACTAGTGATCCCAGTACT
AGGTGTGTCGGTCTTCAGCAAACTTTGGAAACATGGACGGGCGGCCTTGA
GGGGACAAAAAATCAGGGAACCCGAAGATGGGTTAGGGTTAGGGTTCGTC
GTCCGTCTATCTCTTCTACTGGCTGCATGGTGAGTGACGGAGACAACACA
CGCGTGACATGTCGTGGTGTATCCGTGTGTACAGAGCTACCACACAATAT
CCTTTCCTTGGTTGGCCAATTTTCTTGCTCGCGTCGAAGCAGAACTTCGT
GTGCTTCGGTGATTTGCAGTACAGCAGACTTGAGTTTCCCTTAGTTATAT
CCAAGTACTGGCCGTACCGCACTGCCAAAGGACTGCCATCTACTGTGCTG
TGGGCTGCAGCGCGTGAGCGTGAAAGCACTATGAGGGTGTGGGTTACCAG
GTGCGGTGCGGTGCTACAACTAAAATAGAGAGTTACTGTTATAAAAGATT
TTGTTCTCTTGAACATTGCACTGCTTTCACCCTTCTCACCATAACTTCCT
GCGAAAACCCCGCGGTATCTGTTCAGTAGTACAGCTGTCAGCGCACCTGT
CGTATGGATACATTGTAAATAAGATTGTTGTGATGTACGCAGTTACGCCC
GTCAAATCCGTGGTTTGCCCTCGACCCATGCATAACGTGGTCGCTGCACT
CGTAAAGAAATCATGCACAAATGTCCACGAATACTTCTATTTCCGCAGCT
CCTCTAGTCGAGAGTTGAAAAAAATGCCCCGGAAATAACCCTCAGCAGAG
TATCTGGCAGTGTGTGATCCTTCGTGATTCACCCCAACCCCGCCTATGAT
CGATTCACCTTGCAAAGGTCGAAGGCAGGCGTCCAATCGTACGTGAGCGA
GAAAGCCTGTTGGTCAATGATCTACTTCTTCTCCCCAAATACAATTTGAA
GCTTCACGCGCGCGCTGCTTCCCGTGAAACATGAACGAACGGCAGTTTCG
CCTTCCATCGCGTGGCTTCCTCTATGAAGATGGAGCCGGAGCATTTCGAC
CCTTACCACATTCTCGAGCTTCCGTCCAGAGCGGCAAACTCTTCAGTTAT
CAGGTTAGTAGTTAGAGGCGCTCCGCTTGCCTCGCCGCAGCTATTTTCAG
CACGCATAAACGGCCAAAGAGCCTCGAGAAGGGGTACGCTGTGGCGGACG
ATTGAATCGGGGGTGCGCATGCTTTGGCAATCGGTCGACCAGATCGAAAT
GACTAGTACTTGACGGAAGTTGTCGTTTGCAATCGAGCCGCTTTATTGAC
AGGTCAGACACGGCGGGACGTCCATTTACTCATCGTCTCTTCTGCCTTTT
CTTGCTCGAGCCGCGTAGGTCTCACTACCGTCGACTATCCCTCAAGCATC
ACCCTGATAAAAATCCGGGTAACCGACACGCGGCCAATGTGCAGTTCAAC
AAAGTCGCCAAGGCGTACAAGGTGAGGTTCGCTCAAGACTCTCATCTACT
GTGTCATTCACCAATGCTTCTAGAACACCAGAGAGAGGGGAAAAAAGAGA
TCGTGCACCACGTGATCAAAATATAATGATTTTCAAAATCCATCCGATCG
GTAGGTTGTGGGTTCAATTCCTTTCACCCCCGGGACAAATACGAATACTT
GGCGTATTCACCACGAACTTTGAAAAGTATTCGCCTGAGTTTCAGAATGA
GCGTACACATAAAATAAAGTACCCCCTCCCCGTCAATTCGATCTACGAGT
ATTATTAGCAGTCGTGGATGGTCCGGGGCACATAAAATACCCGAGCTCAT
TCTGAAACTCAGGCAGATACCTGCTTTTTCGTGGTGAAGACGCCAAGTAT
TCGTATTTGTCCGGGGGATGACTTCCTTGTATTAACAAGTTTTCTTGTCA
AACGTTTCCGGAAAAAATTATCAGTACGCGTCAAAAATCCCTGCAGAAGA
GAGAAGAATATCCTCGAAACATACCGCCGTCAACATCGTCGTTGGCGAGC
GAGTGGGACTGTTGGCCCTCATTGCGTAATGATGTAAGACAGAAACCGAG
GCATTACACTGGGATCGGACCCGAGGTTCAGATAAGAGAAGTGATTCGCG
ATTAAAAAAGAAAAGAGAGAGAGAGAGAGACGCGTAGCTATGGGTGTTCA
CATGCAGTGTCTTCTAAGTGAACTATCTGTTTCCTCGAAAACTGTAAGTA
GACGAATCAAAGATATGATTACGCCTCGATACTCTCGACGGGTAATAGTG
TACTGTAGGCGCCTAAGCCGCAAGTAATCCCCTCCTTGACCCAGGCCTGC
GGAGATCCGGATACAGCGGTCGGGTAAAATTCATGGAAACATAACAGGAG
AACCGGCGTACGGAAGCTGCGACGTGACTATCCAGTGCAAGTATCAGATC
TTTTGTTGGCTCCTGAGGATTTTAAAACGACGAAGAGAAAATTCGGTTTA
TTTTCAGGTCGGCGGCAGGATTGGTTTGCCTGTTGAACACCTACACATTG
AACGCGGTGCAATCCTCAGTCCTCTTCACGCCATATGTGATTTGCCTTCG
TGGGTGACGTCGGCATGGCAGGGTTGACAATGAAGGCGTGATTGATCGGT
GAGCTTGTGAAGCAGACCGCCAACGGGCTGCGTCGGACCGAGGGTCACAC
ACAGCACAGTAGCAGGTCGTCGCCATCGGCTGAAACGTATTAAAATACCG
TTAGAGTCCTGGTTCGCGCAGCGCAACCGCCCCGCGGGCCTGTACGCACG
AAATGGTAACAATTTTATTTTACAAGGCATTGAACCAACTATCCCGGAGT
TGTTTCGAACGATGCTTATCGCGGCAGTACCTACCCCCCGTAGGACCGTG
GATGGATGCACGCCACGTTCCAATATATATATATATTTGTCAGTGAGCAT
GCAACATGAGGATAACCGACCTAAGTACCCCTCCTCCCCTGTTACATTAT
TTTTTCATGCTGACGAGTACCCGCGGCTTTGAAATGTAAGCTGCACGACC
TCAGCATATGCTCCATCCTCCATGCATCTTTGTTTCTCTTTTTCTGCTGC
TAATAATTTAAGGCGCTTAGCGATCCTGAAGCGCGGCGAAACTGGGAGAA
GTACGGGCATCCGGACGGCTATCAGCCATGGATCTTTGACCTCGCCCTGC
CGACCTGGCTACGGCCAAGCAAGGATACTGATAAGGGGACGATGGTCCTC
TATGCCGTTGGCTACATTGTACGTGTTTGTTTCCTCGTTTCACGACTGTA
CGTTGCATAGCTGTTTTTTCCCCGAAAAATCTCAGAATTTTCGCCATAGT
ATCGTAAGAGCTAGTTTCGATATTGCTGCTTTCTTTCAATTGTGAGGATT
TTTGTTCTTTTACAGCATCTGTAATAAAGGATGTGACAGTGGTGCTTGCT
TTTTTCCGACGTGAAAAATAGATATATACCATCTCGACACGGTGAATATG
TAATAGTTCATTTCAACATTTCGCGTTAAACGTCAAATAGTCCAGTTTCG
AAATCATGCGCTTGATCTCAAGTGCATGGACATAGGTGCATAATACCAAA
ACGCAATTGTTCCCCGCATTTGTCCTGGCTCTTGCTTACTGTCCTCTCTT
TCGTCCCCCTTTACGAGAACCACCTCTCCTAAGCATGCACGGTGTGGCTG
CTGTCGTTGTTGTGTGCAGGCTGTCCTCATTGGCTTCGTGTTGAGTGCCA
AGATGGGGCTGGATATGCTCGACCCTGCCGGGGCCCCGAAGAAGCCGAGA
TTCGAAGTCACTCAGGAAGACGTGCAGGTAGGAATTCGTCCTGTTTTTCA
CGTAGAGCAAAGTTTTTTTTTTCGTCTTGTATTGTTTCTTTTGTTGTATC
AAGTTTCCCCCTCAGGACATGCAAAAGGAAGGGATTGCCAAGTGAGGGTG
GAGAAGAACGAAATATGCATGCTCTTGGCCGTGACAAGATCTGAAACGAT
CCGGAAACATCACCATAGAAGCACGGCATGCATGTATTTGAAGTGGGCAC
TCTAGTCGCTTTGATTCGCATGCCCACCAGGTCTACAAAAGTAAAGATGA
CGTGACGGTTTGGCCATTATTGTTCCGAAACGCGTACAAATTGTGGCGGT
TACGTTGATGGTGGTGACGGGAGTCCATCTTTATCTCCAGATCGTTGTTT
GCTGTTTGTTCTTGCGTGCGATGGGATGTAAATAGTATCTTGTAGATTAG
ATTGTATCACCCGGGGTTTGTATTCTGTATGTAGAATTGCGACCTACTTG
CGGGACATTCTCCAGCATATATATATATATATATTATATATATATATATA
TGCTGTATCGAGTGGGAGGTACACTTTACGGTAATGGAAATGGGGTGATG
GGTCATCGCGAGACTTTCTGGCGCTGATTTAGGTGTAGCATAGTATCTCA
TAACAAAAACAAAGTTAGTTGTAGCGTTGCTTCCAGTATTTCCAGTAAAT
TTACTATGTAGTTGTTGACCTTTTTATTGGCGAAATGAGATAAGTATATA
TAAATATTGCGTTTTAGACTAAAAAATGAAGAACAGTTACCTCCAAAGCT
ACATTTGATTTTTCTTCAATTTGACGAAAAAGAAAAGAGTATACTGTTCC
GGAAAAACTCCTTCGTTTAAATCCACCCTAATACATATATATATATATAT
GTATATTCTCATTATTTACTATATATATGTATTAGGGTTGACTGGCAATT
CTGATCATCCTATTTATCAGATGTTACACGAATGGTGTTATTTTGATTTA
ATTAAATATATACTTTGAAATTCCCAAGGCAGACCTGTTTTTTCATGAAT
TCTGTCAAAATTGATTATGATGCGCACTTTTCCATAAAAGTTCATTTCCG
CCACGTTAGACCGGTGAGTGCTGGAGTATTTAACTGTGTCGTAACTTGCT
TACAAACAGTACAATATATTGTAGTGTGCGATGGAATATTTACAGAAACC
CCAGTTTCATGTAGGGCATCTTTGATAATACGCCACATTTTTATTGCACT
CCATGAAAATTCCGAAAAATACGGAAGCGTAGAGCACATTTCAGTGGTAC
AAAGCAGTAATGTAGAGTCCCGTCTGCACAGGACAGTAGTGTACATGATG
CGTGTACATAGGTAGTACATTGCTGTTGTTGCGGTCCGCCTCTCCTTGAT
TCGTTATCGTCACTTGTGTGTCGGTGTATAATCAACCCCGTCCGCTTACA
AAAACGATAGGTGTCTGTCACTCCTACGTCGTCTTCTATCACTCTTACAT
CAGTCGCCGGTCAATCATTAACTCAAACGCAGTCAATCGCGCGTCAGCGT
ACAAACCGACCACGGTATATGCTCAACGGGGCCAAGAATACGCTCGCGAA
TTTCCGCGGGTGGGAATCGCCTTCGAGGACCAGAGCATGAGGACTGACGA
GGGACAGATCCACAACCCTAAATCGATGCTGATTTAGGTGATTTTCTCCT
TTCCTTGTAGTGCTGCACGTACGTGCGGGTCCGCCTCAACTGCTGACGCT
CCCTCCACCTCCTTCTCTTCGGGAGCGGACGCTTTCTTGTCGGCGTTAAC
GGCTCTCGTCTTGGTCATGAGCCGATAGAGCAACTTTGCGAAGCTGCAAA
GAGACCCAGATGGGATGGACCAGTGTAGCTTTGTTTATACGGGAGGTGGG
GGGCGTGGGGGGTTGTGGACGGGCTTGAAGCGATGAGGGCAGATCCCGCT
GCAAGACGCGAGACACGCCTCCGCTCGTGAATACGGGGCACGGCGCCGTT
CAAAACGAATTTATACGTGTTTTTATGTATTGATATCGCGGGCGATGTGT
GGAGGCAACGCTGACGTTTTTTTATTTGCATCGGTGTCTGAATCCTCTTG
TTTTGTGTTGACCATGTCGCTAATGGTCTGGATGCCTCGTCGCTGTGGTT
AGTGTTTGTTTTTCCTCGTTTTCGAGCGTTGATTTTTAGCAACAAAGCAA
AGACTCCTCTCGTCACGTCTGTGACAAGAGTTTGTACCACTGATCAACCT
CGGCAAGAGTTCTAGCGCTTGGTGGTGTAACCGTTGCGCGTTCGCCTCTT
CCCATCCGCGTTTTACTTGGTGTTTTTTTCTAGCGATTCATCAACCGCTT
GCTCCTGCCTAAGTTATTAATAACTGACCCTCTGGGAGCCTGTATGCCCC
CCCAATTAGCGATGTAGGGTGCAGGGAGTTGTTACTATTTGGTGGTTACG
AAATAACGCGATACGGTTGGCCGTTCTCACTCGACACTGAAAGTAATAGA
GTAAGACGTCAATCGTCAAGAAGAAGAAACGATCGCCGTTTGGACCTGAG
CTACTACGCTAACGGGTGGTGTAAACACTTCTGAGCTTGCTGCAGAAGAA
ATTTCTCATCAGTCACGACTAGGGGCGTTAGGAGATGTATATTTTGGCGT
TGGCGAGGTTCAGTTATCCCAAAAAGCTAAGTTACATATGTATCGACCCC
AAAACTCCACATGGCTTTCTTGCCTCACACCACCGTCACCACGATCACCA
AAAAACAGGCTCTGCTGAATAACCTCGACGACTCCAGCTCGACGGAAGAC
ATTCTCGAGTGCCTGGCGGCCTGCCCGCAGCTGTGCTCGGAAGAGCGAAG
AGCCCTGGCGGAGGATATGGCGCCCACCACTACACCCATCCGGGTGCGTC
TAGCCGCGCGAGGAGCAGCTTTGCTGCTCCGCTCTTCAGCCACGCCACCT
AATGCTCCCGAGAAAAATGCGCGCAGCAGTGGCGGCAAGGGAAAGGGGAA
AGGGAAAGGCGGGGGTAATGGGAAAAATGGTGGTGGCGGCAGTGGAAACA
AAGGGGCAAGCAGTGAAATCGCAGAGGAGGCAAGTGGTGGTGGGGGTGGT
GCTGCTGCTGTTGAGCAAGCAAAGGAGGCGGAGCAGGAATTCTTCAGCAA
GGGAAGGCGCGGCGAAGGCAATCGGAAGACAACGCGCTCGCTCCCGAAGC
TATCGCAAGTGGTGATGCACAATCTGGTCGTACTGCTGAGCGCTTTGTAT
CGAGAGGATGTGGTTGTTGCCGCCGACACGGCGCCGGCGCCGGCAGCCAC
GGGCGAGGGTGACGAAGCATCACAAAACGGGGAAGTTGATGATCCGTCGG
CGAACATTATCACGACAGCGGCGGCCGACGCCGCCGGCGTAGCGGAGGCG
TCCCGCGCCCTGGCTGACGAGCAGGAGGCTCTGTTCGGCCTGGCCGAACC
GCTCCTAGATGCGTGTCTCAAGGTGGCTGCGCGGCGGGCATCGCCCCAGT
TGTTCGGGACGGTGGTGGAGGCCAAGGCAATCCTGCGGCGGCGGCTGTGG
TCGTCTGAGGATCCCGAGGCTCTGAGTGAGCAGGCAAGAGAGGCCGACGT
GGACCTGGACGCGGCGGTTCCTCGTGTTAAGGTGAAGGGGCGGGGGGGAA
GGGGGAGCGGAGGACGGAGGTTAATGAAACGATAACGCTCCTGTAATAAC
CCTGTCATATCCATTTGTGGTGAAGTTTATGCAGTTGACCTCAAACTTCT
GTTGTTTACACTCATCAGTAATATTAGATAAAATAAGGCGGGGGTATTGT
AGGTGGTAAACACGAACTGGCTTTTGCGTGAACGCGTGGCAGAAGCGAAG
TGCCCTACTCTTGTACCGCGAACCTCATTCGCAAGTCAACCCACTTACCG
CAGTTGAGTAGGTCTATATAGCACTCATGTTATAACTCCGTCGTACTCAT
GTTGAGGTGATTATGCAGCTGACCTCAAATCTAACTTGTGTACACTTGAA
AAGTGAAATTGGATCATGACTAATAAGGGAGTGTAGAGCATGCGGTCTAC
ACGTTACAGGCCATCATTATGGTCTACGATGGGTGGGTGGGTTGATTTCT
CTAGAAAAGTGGGTCATGGGGCCGGTGGTGTCTGTGATGGTGGACGTGAG
AGACCGCGCTCTCTCCCTATTGGACCATGTACTAAAGGGGGAGCACCTGG
CTGTACCCACTGTGCGAGTAGTCTAGTCTCCTGAGCTGCACAGTTGCACT
TGCTCTACTTTTGACATTTAGGGGAAAATGAATGGCTTGGCTGCTCTGTG
TGTTCATAAACGTCATTATCAGTTAAGCCTATTTACATACGATAAACCTG
GGCTCTATATACTCCTCAGCAAAATTGGAACATGACAACTGAGAGGTTTA
TATCACACGAGCTATCAAATGTTTTTGTTTTTGTTTTGGATTTTAATCTC
ATGGTTCCCTTTCAGATTGACAGCGTCAAGGTCGAGACTTGGGGAGAGAG
CCAGGTGGCGTTGGGTGACACTGTCACGGCGACCATCACCATCATCAGGG
AGCATGCCTGTGAATACCGAGGGTTCCGGCGCAGGTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1287:1666..10003- >mRNA_H-paniculata_contig1287.1800.1 ID=mRNA_H-paniculata_contig1287.1800.1|Name=mRNA_H-paniculata_contig1287.1800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3300bp|location=Sequence derived from alignment at H-paniculata_contig1287:1666..10003- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGAGTGATACAGTCTATGCTGCGGCGCTGGGACTAGTGATCCCAGTACT AGGTGTGTCGGTCTTCAGCAAACTTTGGAAACATGGACGGGCGGCCTTGA GGGGACAAAAAATCAGGGAACCCGAAGATGGGTTAGGGTTAGGGTTCGTC GTCCGTCTATCTCTTCTACTGGCTGCATGATGAGTGATACAGTCTATGCT GCGGCGCTGGGACTAGTGATCCCAGTACTAGGTGTGTCGGTCTTCAGCAA ACTTTGGAAACATGGACGGGCGGCCTTGAGGGGACAAAAAATCAGGGAAC CCGAAGATGGGTTAGGGTTAGGGTTCGTCGTCCGTCTATCTCTTCTACTG GCTGCATGTTTCGCCTTCCATCGCGTGGCTTCCTCTATGAAGATGGAGCC GGAGCATTTCGACCCTTACCACATTCTCGAGCTTCCGTCCAGAGCGGCAA ACTCTTCAGTTATCAGTTTCGCCTTCCATCGCGTGGCTTCCTCTATGAAG ATGGAGCCGGAGCATTTCGACCCTTACCACATTCTCGAGCTTCCGTCCAG AGCGGCAAACTCTTCAGTTATCAGGTCTCACTACCGTCGACTATCCCTCA AGCATCACCCTGATAAAAATCCGGGTAACCGACACGCGGCCAATGTGCAG TTCAACAAAGTCGCCAAGGCGTACAAGGTCTCACTACCGTCGACTATCCC TCAAGCATCACCCTGATAAAAATCCGGGTAACCGACACGCGGCCAATGTG CAGTTCAACAAAGTCGCCAAGGCGTACAAGGCGCTTAGCGATCCTGAAGC GCGGCGAAACTGGGAGAAGTACGGGCATCCGGACGGCTATCAGCCATGGA TCTTTGACCTCGCCCTGCCGACCTGGCTACGGCCAAGCAAGGATACTGAT AAGGGGACGATGGTCCTCTATGCCGTTGGCTACATTGCGCTTAGCGATCC TGAAGCGCGGCGAAACTGGGAGAAGTACGGGCATCCGGACGGCTATCAGC CATGGATCTTTGACCTCGCCCTGCCGACCTGGCTACGGCCAAGCAAGGAT ACTGATAAGGGGACGATGGTCCTCTATGCCGTTGGCTACATTGCTGTCCT CATTGGCTTCGTGTTGAGTGCCAAGATGGGGCTGGATATGCTCGACCCTG CCGGGGCCCCGAAGAAGCCGAGATTCGAAGTCACTCAGGAAGACGTGCAG GCTGTCCTCATTGGCTTCGTGTTGAGTGCCAAGATGGGGCTGGATATGCT CGACCCTGCCGGGGCCCCGAAGAAGCCGAGATTCGAAGTCACTCAGGAAG ACGTGCAGGCTCTGCTGAATAACCTCGACGACTCCAGCTCGACGGAAGAC ATTCTCGAGTGCCTGGCGGCCTGCCCGCAGCTGTGCTCGGAAGAGCGAAG AGCCCTGGCGGAGGATATGGCGCCCACCACTACACCCATCCGGGTGCGTC TAGCCGCGCGAGGAGCAGCTTTGCTGCTCCGCTCTTCAGCCACGCCACCT AATGCTCCCGAGAAAAATGCGCGCAGCAGTGGCGGCAAGGGAAAGGGGAA AGGGAAAGGCGGGGGTAATGGGAAAAATGGTGGTGGCGGCAGTGGAAACA AAGGGGCAAGCAGTGAAATCGCAGAGGAGGCAAGTGGTGGTGGGGGTGGT GCTGCTGCTGTTGAGCAAGCAAAGGAGGCGGAGCAGGAATTCTTCAGCAA GGGAAGGCGCGGCGAAGGCAATCGGAAGACAACGCGCTCGCTCCCGAAGC TATCGCAAGTGGTGATGCACAATCTGGTCGTACTGCTGAGCGCTTTGTAT CGAGAGGATGTGGTTGTTGCCGCCGACACGGCGCCGGCGCCGGCAGCCAC GGGCGAGGGTGACGAAGCATCACAAAACGGGGAAGTTGATGATCCGTCGG CGAACATTATCACGACAGCGGCGGCCGACGCCGCCGGCGTAGCGGAGGCG TCCCGCGCCCTGGCTGACGAGCAGGAGGCTCTGTTCGGCCTGGCCGAACC GCTCCTAGATGCGTGTCTCAAGGTGGCTGCGCGGCGGGCATCGCCCCAGT TGTTCGGGACGGTGGTGGAGGCCAAGGCAATCCTGCGGCGGCGGCTGTGG TCGTCTGAGGATCCCGAGGCTCTGAGTGAGCAGGCAAGAGAGGCCGACGT GGACCTGGACGCGGCGGTTCCTCGTGTTAAGGCTCTGCTGAATAACCTCG ACGACTCCAGCTCGACGGAAGACATTCTCGAGTGCCTGGCGGCCTGCCCG CAGCTGTGCTCGGAAGAGCGAAGAGCCCTGGCGGAGGATATGGCGCCCAC CACTACACCCATCCGGGTGCGTCTAGCCGCGCGAGGAGCAGCTTTGCTGC TCCGCTCTTCAGCCACGCCACCTAATGCTCCCGAGAAAAATGCGCGCAGC AGTGGCGGCAAGGGAAAGGGGAAAGGGAAAGGCGGGGGTAATGGGAAAAA TGGTGGTGGCGGCAGTGGAAACAAAGGGGCAAGCAGTGAAATCGCAGAGG AGGCAAGTGGTGGTGGGGGTGGTGCTGCTGCTGTTGAGCAAGCAAAGGAG GCGGAGCAGGAATTCTTCAGCAAGGGAAGGCGCGGCGAAGGCAATCGGAA GACAACGCGCTCGCTCCCGAAGCTATCGCAAGTGGTGATGCACAATCTGG TCGTACTGCTGAGCGCTTTGTATCGAGAGGATGTGGTTGTTGCCGCCGAC ACGGCGCCGGCGCCGGCAGCCACGGGCGAGGGTGACGAAGCATCACAAAA CGGGGAAGTTGATGATCCGTCGGCGAACATTATCACGACAGCGGCGGCCG ACGCCGCCGGCGTAGCGGAGGCGTCCCGCGCCCTGGCTGACGAGCAGGAG GCTCTGTTCGGCCTGGCCGAACCGCTCCTAGATGCGTGTCTCAAGGTGGC TGCGCGGCGGGCATCGCCCCAGTTGTTCGGGACGGTGGTGGAGGCCAAGG CAATCCTGCGGCGGCGGCTGTGGTCGTCTGAGGATCCCGAGGCTCTGAGT GAGCAGGCAAGAGAGGCCGACGTGGACCTGGACGCGGCGGTTCCTCGTGT TAAGATTGACAGCGTCAAGGTCGAGACTTGGGGAGAGAGCCAGGTGGCGT TGGGTGACACTGTCACGGCGACCATCACCATCATCAGGGAGCATGCCTGT GAATACCGAGGGTTCCGGCGCAGGTAAATTGACAGCGTCAAGGTCGAGAC TTGGGGAGAGAGCCAGGTGGCGTTGGGTGACACTGTCACGGCGACCATCA CCATCATCAGGGAGCATGCCTGTGAATACCGAGGGTTCCGGCGCAGGTAA back to top
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