mRNA_H-paniculata_contig12851.1790.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: D7FQT3_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT3_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 3.520e-135 Identity = 197/220 (89.55%), Postives = 210/220 (95.45%), Query Frame = 3 Query: 144 MDLDTQQVLAYPGMKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 803 MD+ TQQ YPG+K GE+S+GTTIMAV YDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAI DYVRYFLASHSVELGRLPLVKTAAK+++GLCY NKD+LLAGMIIAGWDPV+GGTVYEIPLGGT++KQKFAIGGSGSTYIYGHVDA F+ENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVS EYIPGD+LPFGP Sbjct: 1 MDIATQQ--EYPGLKDGEISTGTTIMAVQYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAITDYVRYFLASHSVELGRLPLVKTAAKMARGLCYNNKDRLLAGMIIAGWDPVDGGTVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSCEYIPGDQLPFGP 218
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: A0A836CD01_9STRA (Proteasome endopeptidase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD01_9STRA) HSP 1 Score: 355 bits (912), Expect = 1.960e-119 Identity = 171/210 (81.43%), Postives = 194/210 (92.38%), Query Frame = 3 Query: 174 YPGMKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 803 YPG+KP E+S+GTTIMA YDGGVIMGADSRTSTGTYVANRVSDKIT+LHD+IYACRSGSAADTQAI+DYVRYFL+SHS E+GRLP VKTAA L++ +CY NKD LLAGMIIAGWDPV GG+VYEIPLGGT++KQ+FAIGGSGSTYIYGHVDA ++E MTKEEA+ FVRKAI+HAMARDGSSGGVIR+V IDK GV REYIPG++LP+GP Sbjct: 7 YPGLKPNEISTGTTIMACMYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAISDYVRYFLSSHSAEVGRLPTVKTAANLARRICYNNKDNLLAGMIIAGWDPVHGGSVYEIPLGGTIMKQQFAIGGSGSTYIYGHVDAAYKEGMTKEEAKIFVRKAIAHAMARDGSSGGVIRIVTIDKDGVEREYIPGNELPYGP 216
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: W7TIP5_9STRA (Proteasome subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIP5_9STRA) HSP 1 Score: 338 bits (867), Expect = 1.490e-112 Identity = 162/208 (77.88%), Postives = 186/208 (89.42%), Query Frame = 3 Query: 180 GMKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 803 G+KPGEV++GTTIMAV +DGGV++GADSRTSTGTYVANRVSDK+T+LH HIY CRSGSAADTQA+ADYVRYFLASH+++LGR P V TAAKL L Y+NKD LLAG+II GWDP +GG VY + LGGTL +QKF+IGGSGSTYIYGHVD F+ENMT+EE Q FV+KAISHAMARDGSSGGVIRMV IDK+GVSRE+IPGDKLP+GP Sbjct: 13 GLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALADYVRYFLASHAIDLGRTPAVYTAAKLMSTLIYRNKDNLLAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKENMTREECQNFVKKAISHAMARDGSSGGVIRMVTIDKSGVSREFIPGDKLPYGP 220
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: A0A7S2WTH2_9STRA (Proteasome endopeptidase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTH2_9STRA) HSP 1 Score: 313 bits (802), Expect = 9.900e-103 Identity = 146/218 (66.97%), Postives = 188/218 (86.24%), Query Frame = 3 Query: 153 DTQQVLAYP-GMKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 803 + ++ +A+P + GEVS+GTTIMA +DGGV++GADSR STGTY+ANRVSDK+ +LHD I+ CRSGSAADTQAI+DYVRY+L+SH+ E+ R P VKTAA L++ + Y+NKD LLAG+I+ GWDPVEGG+VY IPLGGTL+K FAIGGSGSTYIYGHVDA+++E M++EEAQ FV+K+I+HAMARDGSSGG+IR+V +D GV R+Y+PGD+LP+GP Sbjct: 2 EVERPMAFPVKARDGEVSTGTTIMACCFDGGVVLGADSRVSTGTYIANRVSDKVAALHDTIFMCRSGSAADTQAISDYVRYWLSSHATEVNRPPTVKTAATLARRIAYENKDALLAGVIVGGWDPVEGGSVYVIPLGGTLMKMPFAIGGSGSTYIYGHVDAQYKEGMSREEAQAFVKKSIAHAMARDGSSGGIIRLVTVDANGVERDYVPGDQLPYGP 219
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: A0A7S3M7L5_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7L5_9STRA) HSP 1 Score: 308 bits (788), Expect = 1.130e-100 Identity = 144/208 (69.23%), Postives = 180/208 (86.54%), Query Frame = 3 Query: 180 GMKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 803 G++ GE+SSGTTIMAV +DGGV++GADSRTSTG+YVANRVSDKI +HD+++ACRSGSAADTQA++DYV+Y++ SHS ELGRLP VKT A L + +CY NKD++ AGMI GWDP EGG VYEIPLGGT+++QKFA+GGSGS+YIYG VD+ +RE M+KEE + FV+ AISHAMARDGSSGGVIR+VVID++G+ +E + GD LPF P Sbjct: 8 GLREGEMSSGTTIMAVTFDGGVVLGADSRTSTGSYVANRVSDKIVPIHDYVWACRSGSAADTQAVSDYVKYYINSHSTELGRLPRVKTCANLMRKICYNNKDRMQAGMICGGWDPYEGGQVYEIPLGGTMMQQKFALGGSGSSYIYGLVDSTYREGMSKEECKVFVKTAISHAMARDGSSGGVIRLVVIDQSGIEKEVVLGDNLPFKP 215
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: A0A0W8D518_PHYNI (Proteasome subunit beta n=15 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D518_PHYNI) HSP 1 Score: 302 bits (774), Expect = 1.640e-98 Identity = 145/205 (70.73%), Postives = 177/205 (86.34%), Query Frame = 3 Query: 183 MKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 797 +KPGEV +GT+I+AV ++GGV++GADSRTSTGTYVAN VSDK+T LHD ++ CRSGSAADTQA++DYVRY+L+SHSVELGRLP V TAA L + LCY NKD+LLAG+I+AGWDPV+GG V+ IP+GG +V+Q FAIGGSGSTYIYG VD+E+R NMTKEE QQFV+KA++HAMARDGSSGGVIR V I + V R++ GD LPF Sbjct: 12 LKPGEVDAGTSIIAVRFNGGVVLGADSRTSTGTYVANCVSDKLTPLHDRLFCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQQFVKKALAHAMARDGSSGGVIRTVTITENEVVRDFTSGDDLPF 216
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: A0A7S2V2Y9_9STRA (Proteasome endopeptidase complex n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Y9_9STRA) HSP 1 Score: 302 bits (774), Expect = 4.270e-98 Identity = 144/207 (69.57%), Postives = 173/207 (83.57%), Query Frame = 3 Query: 183 MKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 803 +KPGEVS+GTTIMA Y+GGV++GADSRTSTGTYVANR S+K+T L D+I+ CRSGSAADT+A+ DYV+YFL SHS E+G P V++AA L + LCY+NKD L+AGMII GWDPV+GG VY +PLGGTL++Q AIGGSGSTYIYGHVDA +R M+KEE FV KAISHAMARDGSSGGVIR+V ID G+ ++Y GDKLP+GP Sbjct: 40 LKPGEVSTGTTIMACEYEGGVVVGADSRTSTGTYVANRASNKVTYLADNIFGCRSGSAADTEAVTDYVKYFLESHSTEIGGPPRVRSAAHLVRKLCYENKDALMAGMIIGGWDPVDGGQVYSVPLGGTLMRQPVAIGGSGSTYIYGHVDAAYRPGMSKEECHAFVAKAISHAMARDGSSGGVIRLVSIDANGIEKQYFAGDKLPYGP 246
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: F0W411_9STRA (Proteasome subunit beta n=2 Tax=Albugo TaxID=65356 RepID=F0W411_9STRA) HSP 1 Score: 301 bits (771), Expect = 4.340e-98 Identity = 145/213 (68.08%), Postives = 178/213 (83.57%), Query Frame = 3 Query: 159 QQVLAYPGMKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 797 Q++ A +K GEV +GT+I+AV +DGGV++GADSRTSTG YVANRVSDK+T LHD IY CRSGSAADTQA++DYVRYFL+SHS+++G+LP V TAA L + LCY NKD+LLAG+I+AGWDPV GG VY IP+GG +VKQ FAIGGSGSTYIYG VDA +R +MT+EE Q FV+K ++HAMARDGSSGGVIR V I K V+RE+ G++LPF Sbjct: 2 QEMYAANFLKNGEVDAGTSIIAVKFDGGVVLGADSRTSTGAYVANRVSDKLTGLHDRIYCCRSGSAADTQALSDYVRYFLSSHSLDVGKLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPVHGGQVYSIPIGGAMVKQNFAIGGSGSTYIYGLVDAAYRPDMTQEECQAFVKKMLAHAMARDGSSGGVIRTVTITKDSVTREFTSGEQLPF 214
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: K3WDU5_GLOUD (Proteasome subunit beta n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WDU5_GLOUD) HSP 1 Score: 300 bits (768), Expect = 1.320e-97 Identity = 141/205 (68.78%), Postives = 176/205 (85.85%), Query Frame = 3 Query: 183 MKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 797 +K GE+ +GT+I+AV +DGGV++GADSRTSTGTY+ANRVSDK+T LHD I+ CRSGSAADTQA++DYV+YFL+SH+V+LGRLP V TAA L + LCY NKD+LLAG+I+AGWDP++GG V+ +P+GG +V+Q FAIGGSGSTYIYG VDAE++ MTKEE Q+FV+KA++HAMARDGSSGGVIR V I K V RE+ GD LPF Sbjct: 12 LKRGEIDAGTSIIAVRFDGGVVLGADSRTSTGTYIANRVSDKLTPLHDRIFCCRSGSAADTQALSDYVKYFLSSHAVDLGRLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPIKGGQVFSVPIGGAMVEQDFAIGGSGSTYIYGLVDAEYKPGMTKEECQKFVKKALAHAMARDGSSGGVIRTVTITKDEVVREFTSGDALPF 216
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Match: A0A2D4BVR2_PYTIN (Proteasome subunit beta n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BVR2_PYTIN) HSP 1 Score: 299 bits (765), Expect = 3.620e-97 Identity = 142/205 (69.27%), Postives = 176/205 (85.85%), Query Frame = 3 Query: 183 MKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAIADYVRYFLASHSVELGRLPLVKTAAKLSQGLCYKNKDQLLAGMIIAGWDPVEGGTVYEIPLGGTLVKQKFAIGGSGSTYIYGHVDAEFRENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 797 +KPGE+ +GT+I+AV +DGGV++GADSRTSTGTY+ANRVSDK+T LHD IY CRSGSAADTQA++DYVR+FLASH+++LGR P V TAA L + LCY NKD+LLAG+I+AG DPV+GG V+ IP+GG +V+Q FAIGGSGSTYIYG+VD+ +R NMTKEE Q FV+KA++HAMARDGSSGGVIRMV I V RE++ G +LPF Sbjct: 11 LKPGEIDAGTSIIAVRFDGGVVLGADSRTSTGTYIANRVSDKLTPLHDRIYCCRSGSAADTQALSDYVRHFLASHAMDLGRRPKVHTAANLFRSLCYNNKDRLLAGIIVAGVDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGYVDSAYRPNMTKEECQSFVKKALAHAMARDGSSGGVIRMVTITADDVVREFVSGTELPF 215 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12851.1790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12851.1790.1 >prot_H-paniculata_contig12851.1790.1 ID=prot_H-paniculata_contig12851.1790.1|Name=mRNA_H-paniculata_contig12851.1790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=221bp MDLDTQQVLAYPGMKPGEVSSGTTIMAVAYDGGVIMGADSRTSTGTYVANback to top mRNA from alignment at H-paniculata_contig12851:2073..5359- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12851.1790.1 ID=mRNA_H-paniculata_contig12851.1790.1|Name=mRNA_H-paniculata_contig12851.1790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3287bp|location=Sequence derived from alignment at H-paniculata_contig12851:2073..5359- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12851:2073..5359- >mRNA_H-paniculata_contig12851.1790.1 ID=mRNA_H-paniculata_contig12851.1790.1|Name=mRNA_H-paniculata_contig12851.1790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1326bp|location=Sequence derived from alignment at H-paniculata_contig12851:2073..5359- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |