mRNA_H-paniculata_contig1284.1782.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: D7G457_ECTSI (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G457_ECTSI) HSP 1 Score: 332 bits (852), Expect = 1.030e-111 Identity = 169/245 (68.98%), Postives = 191/245 (77.96%), Query Frame = 1 Query: 1 QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREGIVYR 735 QA PF+ +PPFPPFHDASP CT++L + CLKGL KA +F FF XXXXXXXXXXX VENGD NWLVDGKFLAFAGPH RSE+T+EGY TLTP +YIPYFKKHNVTLV+RLNKKYYDE F++AGI H EAYF+DG VPP V++ FIA CEA+PGA+AVHCK AGLGRTGTCIGCY+MKHY FTAAE+IGWMRICRPGSVIG QQ +L+QME MHREG +R Sbjct: 86 QAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTREGYRTLTPRNYIPYFKKHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCK------------------AGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGTMHREGFAFR 312
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: A0A835YPR9_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPR9_9STRA) HSP 1 Score: 292 bits (748), Expect = 3.940e-95 Identity = 143/231 (61.90%), Postives = 160/231 (69.26%), Query Frame = 1 Query: 1 QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQ 693 +ALLPFR P FHDASP CTY L V+DCL+GL KA RFFDF QVE+GD NW+V+GKFLAFAGP RS IT EGY TLTP +IPYFKKHNVTLVIRLNKKYYDE +F AGIAH E Y++DG VP +L F+ +CE +PGA+AVHCK AGLGRTGTCIGCYLMKHY TAAE IGWMR+CRPGSVIG QQ F+Q Sbjct: 81 EALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCK------------------AGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 293
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: W7T2L2_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T2L2_9STRA) HSP 1 Score: 286 bits (732), Expect = 2.240e-91 Identity = 138/245 (56.33%), Postives = 164/245 (66.94%), Query Frame = 1 Query: 1 QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREGIVYR 735 +A PF FPPFHDASP CTY L++LDCLKG++KA ++ FFDF QVENGD NW+V GKFLAFAGP E++ EGY+TLTP +Y YF K NV LVIRLNKKYYDE +F GI H E Y++DG +P +LQ F+ CE +PGAIAVHCK AGLGRTGTCI CYLMKHY FTAAE IGW+R+CRPGS+IG QQ +L++ME M R+G YR Sbjct: 113 EAFEPFCKVSSSFPPFHDASPCLCTYPLSILDCLKGIAKARFYNFFDFCRFNVEEYEHFEQVENGDLNWIVQGKFLAFAGPQNNRELSPEGYYTLTPENYAGYFLKRNVQLVIRLNKKYYDETKFTSLGIKHLELYYLDGSIPTNAILQTFLKACEETPGAIAVHCK------------------AGLGRTGTCIACYLMKHYRFTAAEAIGWLRVCRPGSIIGPQQHYLEEMEQVMWRQGDAYR 339
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: A0A7S3PJW5_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJW5_9STRA) HSP 1 Score: 284 bits (726), Expect = 2.650e-91 Identity = 141/245 (57.55%), Postives = 166/245 (67.76%), Query Frame = 1 Query: 1 QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREGIVYR 735 +A +PFR + PPFPPFHDA+P CTYNLT+ DCL GL +A ++FDFN +VENGDFNWLV KFLAFAGP +GY TLTP YIPYFKK+ VTLVIRLN+K YDEK+F+ GI H + ++ DG PP +LQ F+ VCE GAIAVHCK AGLGRTG+CIGCY+MKH+G TAA+ IGWMRI RPGSVIG QQ FLQ+ EA MH+EG YR Sbjct: 116 EAFMPFRSS-PPFPPFHDATPIQCTYNLTIPDCLSGLCEAMKLKYFDFNQFNVEEYEHYERVENGDFNWLVQNKFLAFAGPFEMKRDIGDGYLTLTPEDYIPYFKKNGVTLVIRLNRKCYDEKRFIRHGIKHVDLFYPDGSNPPESILQKFLKVCEGEKGAIAVHCK------------------AGLGRTGSCIGCYMMKHHGMTAAQAIGWMRIARPGSVIGPQQHFLQENEARMHQEGQRYR 341
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: A0A813BHU7_9DINO (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BHU7_9DINO) HSP 1 Score: 276 bits (706), Expect = 3.440e-90 Identity = 131/241 (54.36%), Postives = 161/241 (66.80%), Query Frame = 1 Query: 1 QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREG 723 +A PF YPPFPPFHDASP CTYNLT+LDCL+G+ +A FFDF+ +VENGD NWL +GK LAFAGPH T EGYHTL+P YIPYFKK NV+LV+RLNKKYYDE +F + GI H + Y++DG P +L F++ E + GA AVHCK AGLGRTGTCIG ++MKHY F+AAE+IGW+R+CRPGSVIG QQ +L+++E M G Sbjct: 22 EAYAPFENYYPPFPPFHDASPCICTYNLTILDCLRGIHRAKSVGFFDFDKFNIDEYEYFERVENGDLNWLAEGKVLAFAGPHEVRSSTPEGYHTLSPDDYIPYFKKKNVSLVVRLNKKYYDENRFKKVGIDHVDLYYLDGSCPTDAILNRFLSAVEKTKGAFAVHCK------------------AGLGRTGTCIGAWMMKHYNFSAAEVIGWLRVCRPGSVIGPQQHYLKEIEPRMWAAG 244
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: A0A2R5GCL2_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCL2_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.760e-89 Identity = 136/241 (56.43%), Postives = 162/241 (67.22%), Query Frame = 1 Query: 1 QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREG 723 +A PF +PPFPPFHDA+P CTY L+VLDCL+G+ KA FF+F+ QVE GD NW++ KFLAFAGPH R T+EGY TLTP HYIPYFK+ NVTLVIRLN+K YDEK+F AGI H + + DG PP +L+ FI CE + GAIAVHCK AGLGRTGTCIG Y+MKH+G TAAE IGW+R+CRPGS+IG QQQF++ ME M EG Sbjct: 113 EAYAPFINVHPPFPPFHDATPFECTYKLSVLDCLQGVYKAMQHNFFNFSTFDVEEYEHFEQVEAGDLNWIMPNKFLAFAGPHDRRMRTREGYDTLTPEHYIPYFKRRNVTLVIRLNRKCYDEKRFERAGIRHLDLVYPDGTCPPDHILKRFIEACENNDGAIAVHCK------------------AGLGRTGTCIGAYIMKHFGMTAAETIGWIRVCRPGSIIGPQQQFMEHMEPIMRHEG 335
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: A0A7S1B7L7_9STRA (Protein-tyrosine-phosphatase n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7L7_9STRA) HSP 1 Score: 276 bits (705), Expect = 1.970e-88 Identity = 134/241 (55.60%), Postives = 164/241 (68.05%), Query Frame = 1 Query: 1 QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREG 723 +A FRG FPPFHDASP CTY L+VLDCL+GL+KA + FF+F QVENGD NW+++ K LAFAGPH + ++KEGY TL PG YIPYFK NV LVIRLNKKYYDE +F++AGI H E Y++DG VPP ++L+ + + GA+A+HCK AGLGRTGTCIG ++MKHY FTAAE IGWMRICRPGSVIG QQQF++++E M EG Sbjct: 117 EAYEEFRGAI--FPPFHDASPCVCTYKLSVLDCLRGLAKAKMYNFFNFEKFDVQEYEYFEQVENGDLNWIIENKILAFAGPHYTNSLSKEGYRTLIPGDYIPYFKSKNVKLVIRLNKKYYDEVKFIDAGINHFEQYYLDGSVPPKKILKRILREMDKCDGAMAIHCK------------------AGLGRTGTCIGAWMMKHYKFTAAEAIGWMRICRPGSVIGPQQQFMKEIEQEMWHEG 337
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: A0A7S3XJV3_HETAK (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJV3_HETAK) HSP 1 Score: 267 bits (682), Expect = 1.660e-86 Identity = 131/246 (53.25%), Postives = 157/246 (63.82%), Query Frame = 1 Query: 1 QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEA-SPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREGIVYR 735 +A PF+ +P FP FHDASP CTYNL++LDCL GLSKA FFDF +VENGD NWL DGKF+AFAGP + Y P +YIPYF+K NV LV+RLNKKYYDE +F+ AGI H Y++DG VPP L F+A CE GAIAVHCK AGLGR GTCIGCY+MKHY TAAE+IGW+RI RPGS+IG QQ ++++ME M +EG +R Sbjct: 36 EAFRPFQNHHPRFPYFHDASPVVCTYNLSILDCLMGLSKARQLGFFDFRKFDPQEYEYYEEVENGDLNWLADGKFIAFAGPQEKKFGALPNYRLTPPEYYIPYFRKGNVKLVVRLNKKYYDENKFINAGIDHLHLYYLDGSVPPKATLDQFLAACERYMDGAIAVHCK------------------AGLGRAGTCIGCYMMKHYRMTAAEVIGWLRIVRPGSIIGPQQHYMKEMEGAMWQEGEAFR 263
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: F0XVY6_AURAN (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVY6_AURAN) HSP 1 Score: 268 bits (684), Expect = 1.910e-86 Identity = 131/245 (53.47%), Postives = 164/245 (66.94%), Query Frame = 1 Query: 4 ALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITK-EGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREGIVYR 735 A P P +PPFHDASP ACTY++TVL CLKGL KA F FF+F+ VENGD NW+V+GKF AFAGPH R+ + +GY TL P Y YF++ NV L++RLNK YY++ +F++ G H + Y++DG PP+R+L+ F+AV E + GAI VHCK AGLGRTGTCIGCY MKHY FTAAEIIGWMR+CRPGSVIG QQ F+Q+ME + +EG +YR Sbjct: 78 AWKPLGDYGPDYPPFHDASPCACTYDVTVLHCLKGLHKARRFNFFNFDAFDLAEYEHFEAVENGDLNWIVEGKFFAFAGPHDRNRSSNLDGYQTLAPEDYGAYFQRKNVGLIVRLNKPYYNKSKFIQMGADHIDLYYLDGSNPPMRILKKFLAVAEQATGAIGVHCK------------------AGLGRTGTCIGCYCMKHYKFTAAEIIGWMRVCRPGSVIGPQQHFMQEMEQTLWQEGDLYR 304
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Match: A0A7S4A861_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A861_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.820e-83 Identity = 127/237 (53.59%), Postives = 157/237 (66.24%), Query Frame = 1 Query: 25 TYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNXXXXXXXXXXXQVENGDFNWLVDGKFLAFAGPHRRSEITKEGYHTLTPGHYIPYFKKHNVTLVIRLNKKYYDEKQFVEAGIAHKEAYFIDGGVPPLRVLQDFIAVCEASPGAIAVHCKHARVFIEYLLPPRLIHVKAGLGRTGTCIGCYLMKHYGFTAAEIIGWMRICRPGSVIGHQQQFLQQMEAPMHREGIVYR 735 TY + PFHDASP ACTY++TVLDCLKGL KA FFDF+ VE+GD NWLV G+F AFAGPH GY TL P Y+PYFK NV+L++RLNK YYD ++F++ GI H + Y++DG PP+++L+ F+ VCE + GAI VHCK AGLGRTGTCIGCY MKH+ FTAAEII W RICRPGSVIG QQ F+Q+ME + +EG ++ Sbjct: 115 TYGRYAPFHDASPCACTYDVTVLDCLKGLHKARACNFFDFDAFDLNEYEHFEAVEHGDLNWLVYGRFFAFAGPHDAHRNPHTGYETLAPEDYVPYFKSRNVSLIVRLNKPYYDRQKFLKNGIDHVDMYYLDGSNPPIKILRKFLEVCEQTTGAIGVHCK------------------AGLGRTGTCIGCYCMKHHKFTAAEIIAWFRICRPGSVIGPQQHFMQEMERVLWQEGEAFK 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1284.1782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1284.1782.1 >prot_H-paniculata_contig1284.1782.1 ID=prot_H-paniculata_contig1284.1782.1|Name=mRNA_H-paniculata_contig1284.1782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp QALLPFRGTYPPFPPFHDASPGACTYNLTVLDCLKGLSKACYFRFFDFNTback to top mRNA from alignment at H-paniculata_contig1284:2681..4216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1284.1782.1 ID=mRNA_H-paniculata_contig1284.1782.1|Name=mRNA_H-paniculata_contig1284.1782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1536bp|location=Sequence derived from alignment at H-paniculata_contig1284:2681..4216- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1284:2681..4216- >mRNA_H-paniculata_contig1284.1782.1 ID=mRNA_H-paniculata_contig1284.1782.1|Name=mRNA_H-paniculata_contig1284.1782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig1284:2681..4216- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |