mRNA_H-paniculata_contig12832.1779.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: D8LJK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK8_ECTSI) HSP 1 Score: 285 bits (730), Expect = 1.620e-92 Identity = 167/322 (51.86%), Postives = 203/322 (63.04%), Query Frame = 1
Query: 1 IYSCSRDTTVRQWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTAL-VQEYTGHTQDTTACIFLPASAGR---------GFGVS-------TSSGSTKVIATASKDETIKIFDQLTGELLLDHVNPGCGGYTGLAVQQDVMM---MLYASTITGGLYALRLEHAGEHQALNGNSDDDAASG-LRLRCTGFVEGNAIL 903
+YSCSRDTTVRQW+RS + AL+VFEGH LAC+A+A+S DE+TL SGS WDV+TG C SS K PRNLVTCL+ L SGGP+SS V+Q ++ ++GY FFPL LDVS+DG+ VLTS KGF+ AGCE KLWDLR + V+EYTGHTQDTTAC+F+ + G G+G+S ++ S +IATASKD T+KI+D G +L+DHV P CGGYTGLA+Q+D + YASTITGGLYALRLE E A G S G LRLRC GFV GN IL
Sbjct: 1 MYSCSRDTTVRQWNRSGIS----------ALRVFEGHDLACTAIALSEDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCL---SGGPSSS---VVQXXXXXXXXXXXXXXXGLRSSMTVDGYTFFPLFLDVSSDGHQVLTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDGGSGAREGGYGLSPAPWPSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGGPVFYASTITGGLYALRLE---EKVATAGTSRTGLGEGGLRLRCVGFVRGNPIL 303
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: A0A6H5JBE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE9_9PHAE) HSP 1 Score: 257 bits (656), Expect = 3.130e-81 Identity = 165/356 (46.35%), Postives = 195/356 (54.78%), Query Frame = 1
Query: 1 IYSCSRDTTVRQWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISA----------------------------------DEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTAL-VQEYTGHTQDTTACIFLPASAG---------RGFGVSTSSG-------STKVIATASKDETIKIFDQLTGELLLDHVNPGCGGYTGLAVQQDVMM---MLYASTITGGLYALRLEHAGEHQALNGNSDDDAASG-LRLRCTGFVEGNAIL 903
+YSCSRDTTVRQW+RS + AL+VFEGH LAC+A+A+S DE+ L SGSRDTS+R WDV+TG C SS K PRNLVTCL+ L G SSS V Q GEDLKLRVWD REG P++ ++GY FFP LWDLR + V+EYTGHTQDTTAC+F+ + G G+GVS S S +IATASKD T+KI+D G +L+DHV P CGGYTGLA+Q+D + YASTITGGLYALRLE E A S + G LRLRC GFV GN IL
Sbjct: 1 MYSCSRDTTVRQWNRSGIS----------ALRVFEGHDLACTAIALSEGDVPSQRKILPARQSILSKLFHDDDPPPYEHSLEDEKALYSGSRDTSIRAWDVQTGQCISSAKVPRNLVTCLKCL----SGELSSS--VAQGGEDLKLRVWDAREGGLRPSMTIDGYTFFP---------------------------LWDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDDGSGVEENGYGVSPSPSTSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLE---EEVATAAQSQTELQEGGLRLRCVGFVRGNPIL 310
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: A0A835ZHR6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR6_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.540e-69 Identity = 133/278 (47.84%), Postives = 165/278 (59.35%), Query Frame = 1
Query: 4 YSCSRDTTVRQWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTALVQEYTGHTQDTTACIFLPASAGRGFGVSTSSGSTKVIATASKDETIK--IFDQLTGELLLDHVNPGCGGYTGLAVQQDVMMMLYASTITGGLYALRL---EHAGEHQA 822
YS SRDTT+ QW +G G L + GH L SA+ +SADE L SGSRDTSVRLWDV TG + V PRNLVTCL+ +P G + VV+Q GEDLKLR+WDFR +P L+G+ +FPLCLDVS DG Y+LT SKGF+S GCE +LWD R +VQEY GH QD TAC+ PA+ ++ SSG + TASKD+TIK ++ + +G+LL D P L A+T TGGLY L+L E GE A
Sbjct: 7 YSASRDTTLAQWG-----------QGEGPLATYRGHTLTVSALDLSADETHLWSGSRDTSVRLWDVSTGQQRGMVATPRNLVTCLKCMPGEEG-----TNVVVQGGEDLKLRLWDFRTPSSVPAQTLDGFVYFPLCLDVSEDGNYLLTGSKGFNSVGCEGRLWDRRTGQVVQEYNGHAQDVTACLLAPAA------LAASSGGA--VITASKDQTIKARVWGRESGQLLSDFAEPH---------------RLCAATFTGGLYDLQLSEGEAGGETAA 245
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: K3WSF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSF6_GLOUD) HSP 1 Score: 174 bits (440), Expect = 2.600e-48 Identity = 95/251 (37.85%), Postives = 136/251 (54.18%), Query Frame = 1
Query: 1 IYSCSRDTTVRQWHRSAAAGGQGGEEGGGALQ--VFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTALVQEYTGHTQDTTACIFLPASAGRGFGVSTSSGSTKVIA-------TASKDETIKIFDQLTGELLLDHVNPGCGGYTGL 726
IYSCSRDTT+ A+ Q GH L S +A++ DE +LCSG RDT WD+ TG ++ +N++TC +++P +V+Q EDL L++WD R + P GY +F LC+DVS DG Y LTSSKGF+ GCE ++WD R + E+ GH QDTT+C FLP++ G S +S + V A TASKD ++K++D T +L + + P G +T +
Sbjct: 79 IYSCSRDTTIALTSHIASKSSSPSSSSRKQPQPVYLRGHHLNVSTIAVNDDETSLCSGGRDTQTIFWDLTTGRLKAKNTTSQNVITCSKWVP--------VEPLVVQGSEDLTLKLWDERTNLRAPAQSFHGYVYFALCVDVSPDGNYFLTSSKGFNGVGCEVRIWDRRTGKQLYEFNGHQQDTTSCCFLPSATGSSSNDSVTSPADSVRASAIPIPVTASKDGSVKVWDAATSSVLCEALEPSGGMFTSI 321
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: UPI00109BE923 (WD repeat-containing protein 31 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE923) HSP 1 Score: 169 bits (428), Expect = 1.170e-47 Identity = 101/267 (37.83%), Postives = 143/267 (53.56%), Query Frame = 1
Query: 1 IYSCSRDTTVRQWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTALVQEYTGHTQDTTACIFLPASAGRGFGVSTSSGSTKVIATASKDETIKIFDQLTGELLLDHVNPGCGGYTGLAVQQDVMMMLYASTITGGLYALRLE 801
+YS SRD T++ W G+ + +EGH L + + ++ D+ L SGSRD SVRLWDV TG C S + RNLV+C++++P S V+Q GED ++VWD R P ++F C D S DG Y+LT + GF+ +GCEA LWDLR+ V +Y GHTQ +ACIFLP + G +IATAS D T++I+ + T E +L PG G T L + + + S+ G+Y L L+
Sbjct: 3 VYSSSRDKTIKLWKI--------GDCHQDPIDTYEGHKLVVTGIDLNNDQTVLFSGSRDNSVRLWDVVTGQCISHNEVTRNLVSCVKWIP--------QSHEVVQTGEDKMVKVWDTRT--LTPAFTFPPKQYFQTCCDCSDDGKYILTCNNGFNRSGCEATLWDLRQKKQVYQYVGHTQTASACIFLPFTEGI--------APHPLIATASHDSTLRIWKRETKECILVEEFPGSGPLTSLTAWPNGGLCV--SSFHVGIYKLNLQ 241
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: A0A067CE75_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE75_SAPPC) HSP 1 Score: 169 bits (428), Expect = 9.710e-47 Identity = 97/245 (39.59%), Postives = 136/245 (55.51%), Query Frame = 1
Query: 1 IYSCSRDTTVRQWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTALVQEYTGHTQDTTACIFLPASAGRGFGVSTSSGSTKVIATASKDETIKIFDQLTGELLLDHVNPGCGGYTGLAVQ 735
+Y+CSRDTT+ Q +++ + A Q F GH L+ SA+AI+A E L SGSRDT LWDV TG +N+VTC+ ++P +V Q GEDL +R+WD R + P ++GY +FPL +D S DG Y+LTSSKGF+ GCE ++WD R LV E H QD TAC ++ F V TASKD +++I++ +GEL+ + G +TG+A Q
Sbjct: 93 LYACSRDTTISQQAIASS------DVPAAAPQSFTGHTLSVSAIAINAPETHLASGSRDTGTSLWDVTTGTRVQHTTTSQNIVTCMTWVP-------QCETLVAQGGEDLCVRLWDARSWKS-PAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWDRRTGKLVTEMHVHLQDATACAYVRHK--NAFAV-----------TASKDSSLRIWNSASGELVASSFDQSSGMFTGVACQ 310
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: A0A2D4C2N3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2N3_PYTIN) HSP 1 Score: 165 bits (418), Expect = 5.770e-45 Identity = 102/271 (37.64%), Postives = 146/271 (53.87%), Query Frame = 1
Query: 1 IYSCSRDTTVR---QWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTALVQEYTGHTQDTTACIFLPASAGRGFGVSTSSGSTKVIATASKDETIKIFDQLTG-ELLLDHVNPGCGGYTGLAVQQDVMMMLYASTITGGLYALRLE 801
IYSCSRDTTV H +AA L++ GH L S++A+ DE TLCSG RDT LWD+ T ++ +N+VTC ++ P VV Q EDL +++WD R + P +L GY +FPLCLDVS DG ++LTSSKGF+ G E ++WD R + ++ GH QD TAC FLPA + + S +ASKD TIK++D + ++ + + YT +A +++ AS G ++ALR +
Sbjct: 113 IYSCSRDTTVAITAPEHDTAAP-----------LRL-SGHSLNVSSIAVDDDESTLCSGGRDTQTILWDLATQHVKARNTTAQNVVTCAKWFP--------LERVVAQGSEDLSVKLWDERTALRAPAQVLRGYVYFPLCLDVSRDGLFLLTSSKGFNGVGGEVRVWDRRMARQLLQFEGHQQDATACCFLPA-------IDDAVSSVPTPVSASKDGTIKVWDVMDPPSVVCEERDAAAEMYTCVASMGGGVVL--ASAFGGSVHALRFD 354
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: T0QNJ3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNJ3_SAPDV) HSP 1 Score: 164 bits (414), Expect = 1.690e-44 Identity = 92/243 (37.86%), Postives = 132/243 (54.32%), Query Frame = 1
Query: 1 IYSCSRDTTVRQWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTALVQEYTGHTQDTTACIFLPASAGRGFGVSTSSGSTKVIATASKDETIKIFDQLTGELLLDHVNPGCGGYTGLA 729
+Y+CSRDTT+ Q S++ + A Q F GH L+ SA+AI+A E L SGSRDT LWDV T +N+VTC+ ++P ++ Q GEDL +R+WD R + P ++GY +FPL +D S DG Y+LTSSKGF+ GCE ++WD R LV E GH QD +AC ++ TASKD +++I++ +GEL+ + G +T +A
Sbjct: 98 LYACSRDTTISQHVLSSS-------DAPTAPQSFTGHTLSVSALAINAAESNLASGSRDTGTSLWDVTTRARVQHTTTSQNIVTCMTWVP-------QCETLLAQGGEDLCVRLWDTRSWKS-PAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWDRRTGKLVTEMHGHLQDASACAYMR-------------HKNAYAVTASKDSSLRIWNSASGELITSSFDHSSGMFTSVA 312
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: UPI00109B732D (WD repeat-containing protein 31 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B732D) HSP 1 Score: 162 bits (410), Expect = 4.070e-44 Identity = 93/237 (39.24%), Postives = 131/237 (55.27%), Query Frame = 1
Query: 91 LQVFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTALVQEYTGHTQDTTACIFLPASAGRGFGVSTSSGSTKVIATASKDETIKIFDQLTGELLLDHVNPGCGGYTGLAVQQDVMMMLYASTITGGLYALRLE 801
+ +EGH L + + ++ D+ L SGSRD SVRLWDV TG C S + RNLV+C++++P S V+Q GED ++VWD R P ++F C D S DG Y+LT + GF+ +GCEA LWDLR+ V +Y GHTQ +ACIFLP + G +IATAS D T++I+ + T E +L PG G T L + + + S+ G+Y L L+
Sbjct: 100 IDTYEGHKLVVTGIDLNNDQTVLFSGSRDNSVRLWDVVTGQCISHNEVTRNLVSCVKWIP--------QSHEVVQTGEDKMVKVWDTRT--LTPAFTFPPKQYFQTCCDCSDDGKYILTCNNGFNRSGCEATLWDLRQKKQVYQYVGHTQTASACIFLPFTEGI--------APHPLIATASHDSTLRIWKRETKECILVEEFPGSGPLTSLTAWPNGGLCV--SSFHVGIYKLNLQ 316
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Match: A0A8K1CV93_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CV93_PYTOL) HSP 1 Score: 163 bits (413), Expect = 5.300e-44 Identity = 101/269 (37.55%), Postives = 146/269 (54.28%), Query Frame = 1
Query: 1 IYSCSRDTTVRQWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISADEQTLCSGSRDTSVRLWDVKTGDCQSSVKAPRNLVTCLQYLPPSSGGPTSSSAVVIQAGEDLKLRVWDFREGRQMPTLILEGYKFFPLCLDVSTDGYYVLTSSKGFDSAGCEAKLWDLRKTALVQEYTGHTQDTTACIFLP-----ASAGRGFGVSTSSGSTKVIATASKDETIKIFD-QLTGELLLDHVNPGCGGYTGLAVQQDVMMMLYASTITGGLYA 789
+YS SRDTT+ +AA E A +GH L SA+A+ DE +LCSG RDT WD+ T +S +N++TC +++P + VV+Q EDL +++WD R + P L GY +FPLCLDVS DG Y +TSSKGF+ G E ++WD R + ++ GH QD +AC FLP +S G + S+G ++ ASKD +IK+++ +LL + P +T LA D +L A+T G L+A
Sbjct: 114 LYSSSRDTTIAVTTPVSAA------ETESASIKLQGHTLNVSAIAVDTDETSLCSGGRDTQTMFWDLTTAKIKSKNTTAQNVITCSKWVP--------TEHVVLQGSEDLSVKLWDERSALRTPVQTLRGYVYFPLCLDVSRDGLYFMTSSKGFNGVGAEVRVWDRRVGKQLLQFEGHQQDASACCFLPRGVLDSSEGEAPVPNASNGIPTPVS-ASKDGSIKVWNVNAENQLLCEANEPSGRMFTSLASTGDDGTVL-AATFNGDLHA 366 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12832.1779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12832.1779.1 >prot_H-paniculata_contig12832.1779.1 ID=prot_H-paniculata_contig12832.1779.1|Name=mRNA_H-paniculata_contig12832.1779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=302bp IYSCSRDTTVRQWHRSAAAGGQGGEEGGGALQVFEGHVLACSAVAISADEback to top mRNA from alignment at H-paniculata_contig12832:2738..7172+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12832.1779.1 ID=mRNA_H-paniculata_contig12832.1779.1|Name=mRNA_H-paniculata_contig12832.1779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4435bp|location=Sequence derived from alignment at H-paniculata_contig12832:2738..7172+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12832:2738..7172+ >mRNA_H-paniculata_contig12832.1779.1 ID=mRNA_H-paniculata_contig12832.1779.1|Name=mRNA_H-paniculata_contig12832.1779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1812bp|location=Sequence derived from alignment at H-paniculata_contig12832:2738..7172+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |