mRNA_H-paniculata_contig12809.1766.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 255 bits (651), Expect = 4.770e-80 Identity = 131/250 (52.40%), Postives = 168/250 (67.20%), Query Frame = 1
Query: 1 VLASLQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVEC-FGILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLHS 747
VLA LQIL RGN F ++ +S +S T S FH FCK FA +L+ E++ LPTG+ L M+ YD +GF GA GSTDVTHI WG P + + TGKE T+A++ TVDHSG +L +T+G GA NDK+I+R+DK V +R +Y KL +DG + EKG YL+VD GYH+ L+ P+K R +L +SKRL+S RKDVEC FGILKGRFRI+KL I F + + NV +TCCILHNMLHS
Sbjct: 84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRT--LIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHS 331
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 255 bits (651), Expect = 5.720e-79 Identity = 131/250 (52.40%), Postives = 168/250 (67.20%), Query Frame = 1
Query: 1 VLASLQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVEC-FGILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLHS 747
VLA LQIL RGN F ++ +S +S T S FH FCK FA +L+ E++ LPTG+ L M+ YD +GF GA GSTDVTHI WG P + + TGKE T+A++ TVDHSG +L +T+G GA NDK+I+R+DK V +R +Y KL +DG + EKG YL+VD GYH+ L+ P+K R +L +SKRL+S RKDVEC FGILKGRFRI+KL I F + + NV +TCCILHNMLHS
Sbjct: 175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRT--LIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHS 422
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 242 bits (618), Expect = 3.350e-74 Identity = 125/250 (50.00%), Postives = 163/250 (65.20%), Query Frame = 1
Query: 1 VLASLQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVECF-GILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLHS 747
VLA LQIL RGN F ++ +S +S TA + FH F + FA +++ E I LPTGD M YD +GF+GA GSTDVTHI WG P + TGKE + T+AY+ TVDH+ +L +T G G+ NDKSI+R+D V +RE +Y + + DG KG YL+VD GYH+ V L+ P+K + +LA+SKRL+SVRKDVECF GI+KGRFRI KL I + + + NV +TCCILHNMLHS
Sbjct: 159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKW--VTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHS 406
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 233 bits (594), Expect = 2.950e-71 Identity = 121/249 (48.59%), Postives = 155/249 (62.25%), Query Frame = 1
Query: 1 VLASLQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVEC-FGILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLH 744
VL LQ+LGRGN F +V QLSLMS TA+ FH FC F+ L+H+W+ LP G+ L Y +G GA S D THI+W P S T+ GKE ++TL YEA+ DHSG IL TKG GA NDK++V+ D +V +RE E + S L D +G G +LIVDGGYH+ L+CP KE + + WSKR +S+RKD+EC FG LKGRFR+ K ILF ++ N +T CI+HNMLH
Sbjct: 113 VLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPS--LICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLH 359
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 223 bits (569), Expect = 3.490e-68 Identity = 115/244 (47.13%), Postives = 153/244 (62.70%), Query Frame = 1
Query: 16 QILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVECFGILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLHS 747
Q+LG+GN FD+V QLS MS+S AQ FH FC+ FA ++F E I LPTG L M + +G+ GA GSTDVTHI W P + TGKE F T+AY+ TVDH G L +T G GA NDK+I+R+D V +R Y KLR +G +++ +G +LIVD GYH+ V L+ P+K + E+ A+S+ L+SVRKDV CF RI KL + + + V N+ +TCCILHNMLH+
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEW--VTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF-------RILKLRMPYHKREYVDNIFFTCCILHNMLHT 276
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 223 bits (567), Expect = 7.170e-68 Identity = 118/246 (47.97%), Postives = 153/246 (62.20%), Query Frame = 1
Query: 13 LQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVECF-GILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLHS 747
L++LG+GN FD+V QLS MSES AQ+ FH FC+ A ++F E I LPTG L M + +G GA GSTDVTHI P + TGKE F T+AYE TVDH+G L +T G AG NDK+ +R+D V +R Y KLR +G E+ +G +LIVD GY+ E+ E+ A+S+ L+SVRKDVECF GILKGRFRI KL + + + + N+ +TCCILHNMLH+
Sbjct: 137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYY--------------ESNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 222 bits (566), Expect = 7.490e-67 Identity = 118/246 (47.97%), Postives = 158/246 (64.23%), Query Frame = 1
Query: 13 LQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVECF-GILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLHS 747
L++LGRGN FD++ QLS +SE T Q FH F +RFA + F + +K P G L ++ Y VGF G AGS D THI + P S H GKE F+T+A+E DH LG++K GAMNDK+IV FD+ V+ ++ + + L DG E E+G+YLIVDGGYH+ CP + T++ELA+ K+L+SVRKD+ECF GILKGRFRI K+P+L+R ++ + TCC LHNMLHS
Sbjct: 137 LKVLGRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKTE--CKDVPFTLLGEDGSEFEERGLYLIVDGGYHK-------CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHS 373
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 219 bits (558), Expect = 1.470e-65 Identity = 113/248 (45.56%), Postives = 154/248 (62.10%), Query Frame = 1
Query: 1 VLASLQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVEC-FGILKGRFRISKLPILFRESAQVGNVVWTCCILHNML 741
VLA L+ILGRGN FD+V +++ M E+T FH F +RFA ++F W+++P D L MK YD VG +GA GS D THI W P S GKE ++TL + V H +L T+G GA NDK+I++FDK AVR G Y+ + L+ DG + EKG +LIVDGGYH L P + + E + ++L+SVRKD EC FG++KGRFRI K+ L+R+ ++ N+ +TC ILHNML
Sbjct: 135 VLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFACEIFPVWVRMPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMRVLSCTRGFPGAQNDKTIIKFDKFAMAVRNG-WYKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQ--LQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNML 379
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.280e-64 Identity = 115/252 (45.63%), Postives = 154/252 (61.11%), Query Frame = 1
Query: 1 VLASLQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPT--GDALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVECF-GILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLHS 747
VLA L ILGRGN F + Q+S MS T Q+ FH FCK FA +++ E I LP+ L MK YD +GF+GA GS DVTHI W P + TGKE T+ Y+ TV+H+G + +T+G + NDK+ V +D V+ +R Y + + DG KG YL+VD GYH+ L+ P K + ++ +SKRL+SVRKDVECF GILKG FRI K+ + + E ++ NV +TCCILHNMLH+
Sbjct: 99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWK--ILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHT 348
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.880e-63 Identity = 116/252 (46.03%), Postives = 157/252 (62.30%), Query Frame = 1
Query: 1 VLASLQILGRGNSFDEVGQLSLMSESTAQSGFHTFCKRFAEDLFHEWIKLPTGD--ALAATMKAYDAVGFNGAAGSTDVTHIAWGCTPASHTHL*TGKERFSTLAYEATVDHSGWILGMTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVYLIVDGGYHQAYPVYLVCPAKEAETREELAWSKRLDSVRKDVECF-GILKGRFRISKLPILFRESAQVGNVVWTCCILHNMLHS 747
VLA L ILGRGN F + LS MS T Q FH FC+ FA +++ E I LP+ + L M Y+ +GF GA GSTDVTHI W P + TGKE T+ Y+ TV+H+G +L +T+G G+ NDK+I+ D+ V +R + Y + +DG + KG YLIVD GYH+ L+ P+K + +L +SKRL+SVRKDVECF GILK RFRI KL + +++ ++ V +TCCILHNMLH+
Sbjct: 128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWR--MLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHT 377 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12809.1766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12809.1766.1 >prot_H-paniculata_contig12809.1766.1 ID=prot_H-paniculata_contig12809.1766.1|Name=mRNA_H-paniculata_contig12809.1766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp MTKGMAGAMNDKSIVRFDKTVQAVREGELYRSMACKLRDRDGVEQVEKGVback to top mRNA from alignment at H-paniculata_contig12809:4166..5495- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12809.1766.1 ID=mRNA_H-paniculata_contig12809.1766.1|Name=mRNA_H-paniculata_contig12809.1766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1330bp|location=Sequence derived from alignment at H-paniculata_contig12809:4166..5495- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12809:4166..5495- >mRNA_H-paniculata_contig12809.1766.1 ID=mRNA_H-paniculata_contig12809.1766.1|Name=mRNA_H-paniculata_contig12809.1766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig12809:4166..5495- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |