mRNA_H-paniculata_contig128.1758.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: D7FTS1_ECTSI (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS1_ECTSI) HSP 1 Score: 359 bits (921), Expect = 3.540e-116 Identity = 174/264 (65.91%), Postives = 200/264 (75.76%), Query Frame = 1
Query: 4 DTYVYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGS--SGKVQPAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPLT----IEPGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICEENKVS 777
D YVYQHFFADFGPLHLGHV FC++L L + + + GG K +P VYV SSDHPHRRSNA +LV+AY+V LCLGK E+AY PFL +QPPL P+RDASFG+CTYHLEVLDC RAL+RAA+LGH D+ F+ ++YAFYDK+ENGDLNWIIPGK AFSGPL +EPGKWTLLAEDY+PIF KLG+TCV+RFNKKCYDRRRFTEGGI+H DL Y DGGNP+EEILQRFLKICE K S
Sbjct: 67 DEYVYQHFFADFGPLHLGHVRAFCRKLGALERQQGQQHEKGGGERCEEKKKP-VYVYSSDHPHRRSNAVVLVVAYAV-----------------LCLGKTVEDAYTPFLAVQPPLIPYRDASFGICTYHLEVLDCARALARAASLGHFDLGT-FNADQYAFYDKIENGDLNWIIPGKFAAFSGPLATRREVEPGKWTLLAEDYIPIFRKLGITCVVRFNKKCYDRRRFTEGGIRHVDLFYVDGGNPSEEILQRFLKICETTKAS 311
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: A0A7S2S891_9STRA (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S891_9STRA) HSP 1 Score: 253 bits (645), Expect = 5.670e-79 Identity = 123/257 (47.86%), Postives = 169/257 (65.76%), Query Frame = 1
Query: 13 VYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQPAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPLT----IEPGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICEENK 771
VY+ FFAD+GPL+LG+++ + ++ LL + S+GK V SS H HRRSNA +L +YS+ + L + EAY PF+GIQPPL P+RDA+F +CT+ + VLDC + L RA LGH D+ FD +++ D++ENGD++WIIPGK +AFSGPL IE G +T+ AE+Y+P+ LGVT ++RFNKKCY+R+ FT+ GI HFDL YEDGGNPTEEI+Q+F++ICE K
Sbjct: 5 VYEQFFADYGPLNLGNLHRYVTAIDALL--------AEAESAGKT---VVHYSSSHGHRRSNAVLLACSYSI-----------------IRLNRSVPEAYRPFMGIQPPLMPYRDAAFAICTFSISVLDCLKGLKRALDLGHFDMET-FDVDKFFHLDRIENGDVSWIIPGKFIAFSGPLARKREIEAGVFTMAAEEYVPLMKSLGVTAIVRFNKKCYERKHFTDAGIHHFDLYYEDGGNPTEEIMQKFIRICENEK 232
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: A0A7S3XSC2_HETAK (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSC2_HETAK) HSP 1 Score: 235 bits (600), Expect = 3.770e-72 Identity = 123/253 (48.62%), Postives = 155/253 (61.26%), Query Frame = 1
Query: 16 YQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQPAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPLT----IEPGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICE 762
Y+ FFADFGPLHLGH F ++ L ++ V +CSSD+PH +N +++ Y +++ LGK AEEAY PFLG++ P PFRDA F VC Y L LD R RA GH D A FD EEYA + +E+GDLNW++PGK AFSGPL +E GK TL EDY+P+F +LG+T V+RFNKKCYDRR+F E G++H DL YEDGGNPT+ ILQRFL +CE
Sbjct: 22 YERFFADFGPLHLGHTAAFMDLIDLKLSIKNGKRLV-------------LCSSDNPHIVANTVVMLGIY-----------------QMVKLGKSAEEAYVPFLGLRLP--PFRDAVFAVCPYLLTPLDVLRGARRALRRGHWDPAT-FDREEYAHFSAIEHGDLNWVVPGKFAAFSGPLAQRRELEAGKATLTPEDYVPLFRRLGITAVVRFNKKCYDRRKFLEAGVRHHDLYYEDGGNPTDAILQRFLDLCE 241
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: A0A7S2V8J3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8J3_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.300e-68 Identity = 107/193 (55.44%), Postives = 129/193 (66.84%), Query Frame = 1
Query: 163 VCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTY-HLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPLT----IEPGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPT 726
VCSS HPH RSN A+L+ Y + +G K EEAY PF + PPL PFRDA F VCTY VLD R + +A TL H + + F+ EEY +YDK+ENGD+NW++PGK +AFSGPL IEPGK TL+ EDY+PIF KLGVTC+IRFNKKCYDRR+FT G++H DL Y DGGNPT
Sbjct: 4 VCSSGHPHHRSNLAVLLGGYMLSYEG-----------------KTPEEAYLPFFDLDPPLAPFRDAVFAVCTYIGCSVLDVFRGMYKALTLNHFNF-DTFNAEEYNYYDKIENGDINWVVPGKFIAFSGPLAVRREIEPGKSTLIPEDYIPIFKKLGVTCIIRFNKKCYDRRKFTNAGLRHVDLYYGDGGNPT 178
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: A0A8J2WWB4_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWB4_9STRA) HSP 1 Score: 224 bits (570), Expect = 8.790e-68 Identity = 120/257 (46.69%), Postives = 149/257 (57.98%), Query Frame = 1
Query: 7 TYVYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQPAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPLT----IEPGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICEE 765
TYVY+ FFADFGPL+L V C+R+ LL+ + V+ C DHPH+R+NAA L V L + AEEA+ PFLG PPL PFRDA FGVCT+ VLDC R +++A L H D A FD + Y +KLE GDL WI+PGK AFS P + PG +TL E Y +F +L +TCV+RFNKK YDR F + GI+H DL YEDG NP+E ILQRFL +CE+
Sbjct: 48 TYVYEQFFADFGPLNLACVTKHCRRMFSLLEQGTT--------------VVHYCG-DHPHKRANAAFLACCVCV-----------------CVLKQTAEEAFAPFLGCDPPLHPFRDAGFGVCTFQCLVLDCVRGVAKACALKHYDYAQ-FDVDAYETLEKLEEGDLAWIVPGKFAAFSTPTEERRELRPGVFTLAVEQYAALFKRLNITCVVRFNKKLYDRAIFQKAGIRHVDLWYEDGSNPSEAILQRFLALCEQ 271
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: A0A0G4G842_9ALVE (Protein-tyrosine-phosphatase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G842_9ALVE) HSP 1 Score: 220 bits (561), Expect = 1.380e-66 Identity = 116/253 (45.85%), Postives = 155/253 (61.26%), Query Frame = 1
Query: 13 VYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQPAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPL---TIEPGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICE 762
VY+ FFADFGPL LG Y +CK +E L + + + V+ CS+D PH+R+NAA LV A+ +++ L K A++AY PF+GI PP PFRDA++G+CTYH + DC + L LG D N F+ +EY +++++ENGDLNW+IP K +AFSGP T E G T E+Y+PIF KLGVT V+R NKK YDR RFT+ GIKH DL + DG P+ EI+ +FL I E
Sbjct: 42 VYEPFFADFGPLSLGLTYRYCKMMERKLSDPALAS----------KRIVHYCSTD-PHKRANAAYLVGAF-----------------QIVVLNKPADDAYRPFVGIYPPFLPFRDATYGICTYHCTIHDCLKGLEWGIKLGWFDYTN-FNLQEYEYFERVENGDLNWVIPKKFVAFSGPAPTATDEDGFHTFTPENYVPIFKKLGVTMVVRLNKKQYDRERFTKHGIKHVDLYFLDGSCPSREIILKFLDIVE 265
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: A0A0G4EP06_VITBC (Protein-tyrosine-phosphatase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EP06_VITBC) HSP 1 Score: 216 bits (551), Expect = 5.320e-64 Identity = 115/285 (40.35%), Postives = 157/285 (55.09%), Query Frame = 1
Query: 1 NDTYVYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQ-------------------PAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPLTIEP---------GKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICEENK 771
+D +Y+ FF DFGP++LGH Y FC+ ++ L+ + DGG++G P+ C S S +LV + + A+Y +V+ LGK AE+AY PFLG+ PPL PFRDASFGVCTY +LDC + + A LG D FD E Y YD +ENGDLNW+IP K +AFS P ++P G+ L EDY IF ++GV V+R N+K YDRRRF + GI+H DL + DG P ++++ RFL CE +K
Sbjct: 59 DDKLLYKPFFQDFGPVNLGHTYRFCRAVQRRLREAEAHRSSDGGTNGHSHXXXXXXXXXXXXXXXXXXVPSSSPCPSLSLPTPSPRRVLVHYSNQDPQKRANAVYLMGAFQVIVLGKTAEQAYAPFLGVYPPLLPFRDASFGVCTYSCSILDCLKGIQYAIKLGWFDYKT-FDVEAYDKYDAVENGDLNWVIPNKFMAFSSPFGLDPREQSALKAKGQHYLPPEDYARIFREVGVGLVVRLNRKTYDRRRFLDYGIQHIDLFFPDGACPPKDVIDRFLMACETHK 342
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: F0Y4C3_AURAN (Protein-tyrosine-phosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4C3_AURAN) HSP 1 Score: 213 bits (543), Expect = 1.020e-63 Identity = 114/255 (44.71%), Postives = 154/255 (60.39%), Query Frame = 1
Query: 1 NDTYVYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQPAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPLTIEPGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICEE 765
+ T+VY+ FFADFGPL+LG V +C+ ELL+ + V V+ CS DH HRR+NAA L A++V + L AY PF+ PPL PFRDA FGVCTY L ++D R +++A LGHLD A FD +EY ++LE+GDL + + +A PG T EDY+P+F +LGVTCV+RFNKK YD+R FT GI+H +L YEDGGNP+E+I+QRF+++CE+
Sbjct: 46 DSTFVYEQFFADFGPLNLGCVVRYCRATAELLQRCGDEKLV----------LVHYCS-DHRHRRTNAAFLACAFAV-----------------VALRWSVRRAYAPFVDCSPPLHPFRDAGFGVCTYQLLLVDVLRGVAKALALGHLDYAT-FDCDEYDRMERLEHGDLAPLARRREIA--------PGVHTFAPEDYVPLFQRLGVTCVVRFNKKLYDKRAFTRAGIRHVELFYEDGGNPSEQIMQRFIQVCEQ 263
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: A0A5J4W779_9EUKA (Protein-tyrosine-phosphatase n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4W779_9EUKA) HSP 1 Score: 218 bits (554), Expect = 6.210e-63 Identity = 116/262 (44.27%), Postives = 156/262 (59.54%), Query Frame = 1
Query: 1 NDTYVYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQPAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANG-FDPEEYAFYDKLENGDLNWIIPGKLLAFSGPLTIE----PGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICEENK 771
+++ +YQ F +DFGPL++ +Y FC +E+ LK S++ + Y CS+D H+++N+ LV Y+V L LG +EAY PFL PPL PFRDAS+G TY L VLD R +++ +G +D G F+ EY Y+K+ENGD+NWI+PGK +AFSGP E G T E YLP F K GVT V+R NKK YDRRRF + GI H+DL + DGG PTE I+++FL+ICEE K
Sbjct: 38 DNSLIYQPFSSDFGPLNMACLYRFCCAVEDYLKQTSQT----------TKKIYYYCSNDQ-HKKANSVTLVCCYAV-----------------LYLGATPDEAYRPFLRFNPPLPPFRDASYGPSTYSLSVLDVVRGIAKGQQVGFIDFQGGKFNLNEYERYEKVENGDMNWIVPGKFIAFSGPSNTEINQSNGICTHTPEFYLPFFRKSGVTAVVRLNKKMYDRRRFVDKGINHYDLYFVDGGIPTEAIVKKFLEICEEEK 271
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Match: A0A812V763_9DINO (Protein-tyrosine-phosphatase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V763_9DINO) HSP 1 Score: 208 bits (530), Expect = 3.210e-61 Identity = 114/254 (44.88%), Postives = 150/254 (59.06%), Query Frame = 1
Query: 10 YVYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQPAVYVCSSDHPHRRSNAAILVLAYSVRTKGNNTALYSKSTKRVLCLGKGAEEAYWPFLGIQPPLCPFRDASFGVCTYHLEVLDCTRALSRAATLGHLDIANGFDPEEYAFYDKLENGDLNWIIPGKLLAFSGPL---TIEPGKWTLLAEDYLPIFCKLGVTCVIRFNKKCYDRRRFTEGGIKHFDLLYEDGGNPTEEILQRFLKICE 762
++Y+ FFADFGPL+LG V+ +CK LE L G SS + V+ CS D P +R+NAA ++ A+ +V+ LGK A+EAY PF + PP P+RDA+ G+CTY L VLDC + L +A G D + FD E Y F++K+ENGD+NWIIP K LAF+GP T G EDY+PIF G+ V+R NKK YDRRRF + G+KH DL + DG P EI+ +FL I E
Sbjct: 41 FIYEPFFADFGPLNLGMVWRYCKALEAKL----------GDSSLADKRIVHYCSHD-PKKRANAATMIGAF-----------------QVIVLGKTADEAYKPFQSVYPPFLPYRDATCGICTYSLTVLDCLKGLEKAIECGWFDWKH-FDVESYEFFEKVENGDMNWIIPDKFLAFAGPSPTSTDADGFPAFTPEDYVPIFRDAGIGLVVRLNKKQYDRRRFVDHGLKHVDLYFLDGSCPDREIISKFLYIVE 265 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig128.1758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig128.1758.1 >prot_H-paniculata_contig128.1758.1 ID=prot_H-paniculata_contig128.1758.1|Name=mRNA_H-paniculata_contig128.1758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp NDTYVYQHFFADFGPLHLGHVYTFCKRLEELLKSRSRSEAVDGGSSGKVQback to top mRNA from alignment at H-paniculata_contig128:29056..30901+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig128.1758.1 ID=mRNA_H-paniculata_contig128.1758.1|Name=mRNA_H-paniculata_contig128.1758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1846bp|location=Sequence derived from alignment at H-paniculata_contig128:29056..30901+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig128:29056..30901+ >mRNA_H-paniculata_contig128.1758.1 ID=mRNA_H-paniculata_contig128.1758.1|Name=mRNA_H-paniculata_contig128.1758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig128:29056..30901+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |