mRNA_H-paniculata_contig128.1757.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig128.1757.1
Unique NamemRNA_H-paniculata_contig128.1757.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: D7FTS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS0_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 2.640e-76
Identity = 155/333 (46.55%), Postives = 207/333 (62.16%), Query Frame = 2 
Query:    8 GTRVNLRARTPAAS--GRTTTP-LLQPAYQSFHAGTPRRDSAVQKLEAERDAVIGRMSTKEKIDWYAAQPLF-HMPKVHSFIEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVESDKKLKKAALDNALMALADPTSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKAIFAKFGDDPTDFINNLPASY 994
            G R  LRAR PAAS  GR   P L+QPA+QSFHAG P R+SAV K    R          E I+      LF   P++   IE   LD+ +R +PLALFLTVPA+ +E+YV+  ET+LMGCFF+FLG A+D GGE   K  DD+   I +A    E  +IK +T DL   K +L   + + AI +A      R  E  ++   H  RE  VK+L+A +  ++KR+ +LR AE+  +L E+VAKV +DKKLKKAALDNALM LADP+ AAK DPVS++F  YW++ A   EKNK+KPV +T EQ   +EADI+++  K G DP   + ++P +Y
Sbjct:    9 GARGALRARLPAASAGGRARVPPLIQPAFQSFHAGLPSRESAVDKPAPSR---------AEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPLALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGGEGVGKYFDDQTAEIKRAQQSAEQEQIKRVTGDLATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMAAPHMSRESTVKLLEALRGAKIKRVADLRNAEIATALTEVVAKVSADKKLKKAALDNALMTLADPSKAAKVDPVSEVFAQYWKQKAIDTEKNKNKPVALTPEQIATNEADIRSLCEKVGQDPAMLLASMPKTY 332
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BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: A0A836CD66_9STRA (ATP synthase subunit b n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD66_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.580e-26
Identity = 87/295 (29.49%), Postives = 142/295 (48.14%), Query Frame = 2 
Query:   65 PLLQPAYQSFHAGTPRRDSAVQKLEAERDAVIGRMSTKEKIDWYAAQPLFHMPKVHSFIEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVESDKKLKKAALDNALMALADPTSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKAIFAKF 949
            P   PA Q FHAG P R    Q  E  +  +                         + +E+ GL    R LP+ L L +PA+ QE+ V+  ET L+GCF +F+G      G++     D +AD IL A N  E   I+ +   +  H  +L +A  +  +      + +++A++L++   H  RE  V MLD   +      +  + A V+ ++  +  +V+SDKKLKK ALD AL++LADP  A   D V+ +FT ++++ +A  +K   +   +T  +R+     I A  A+F
Sbjct:   21 PRTAPATQHFHAGIPARKEETQPAETSKILLTPG----------------------TIVEKLGLHDWTRALPVGLILAIPALNQEWIVLSEETQLLGCFMLFVGTIYTKFGDSIGAALDAQADAILDARNKEEDASIEVIKETIAFHHARLASAGIMSDLIALERETMEKQAKLLTVKVPHDMRELTVAMLDTKAAAEANEWHAAQDALVKSAVDTVTEQVQSDKKLKKTALDEALLSLADPAKAPATDAVTGLFTQFFKDTSAQAQKEASQEKTVTPAERQALIDSIDAQTARF 293
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BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: A0A8K1CIZ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIZ6_PYTOL)

HSP 1 Score: 111 bits (277), Expect = 2.730e-23
Identity = 91/285 (31.93%), Postives = 140/285 (49.12%), Query Frame = 2 
Query:  122 AVQKLEAERDAVIGRMSTKEKIDWYAAQPLFHMPKVHSFIEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVES-DKKLKKAALDNALMALAD-PTSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKAIFAKFGDDPTDF 970
            A+ +++A R       S   + +  AA P    P    F  QAGLD  +   PL   L +P + +  YV++ ET L  CFF+F       GGEA +   D +A  IL   N VE   I+     L+ HK  L   EDI A+ EA   + +   E+ S   RHK RE  VK L++ +        EL++A V  +  ++ A++E  DK +K AA  +AL  LA+ PT   K D V+ +F    R  A ++E  + + + +TA ++ + +AD+ A   +F  +  DF
Sbjct:   16 ALAQVQAARPLAAFHTSASRQEEEKAAVPA---PVHPGFFAQAGLDDWKVSAPLVAALAIPTLSKGVYVLNEETQLAACFFLFCTSVYKFGGEAIASYFDARASAILSEHNAVEDANIQLAKETLDTHKAMLNIHEDIAAVAEAHKEAVKLMCEVQSYKLRHKTRETFVKNLESIRQIEASYNVELQKAMVANATGKVRAQLEKGDKNVKAAAFKHALDILAEAPTEEGKTDDVAALFAKELRAYAESLESKQGEVITLTAAEQAELQADLDAYMKRFDLEDADF 297
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BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: A0A2D4BDW7_PYTIN (ATP synthase subunit b n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDW7_PYTIN)

HSP 1 Score: 105 bits (261), Expect = 3.530e-21
Identity = 80/246 (32.52%), Postives = 127/246 (51.63%), Query Frame = 2 
Query:  239 IEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVES-DKKLKKAALDNALMALAD-PTSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKAIFAKFGDDPTDF 970
            + Q GLD  +   PL   L++PA+ +  YVI+ ET L  CFF+F       GG+A +   D +A  IL   N VE   I+     LE HK  L   ED+ A+ EA   + +   E+ +   +HK RE  VK L++ +        EL++A V  +  ++   +E  DK +K AA  +AL  L++ P   AK+D V+ +F    R  A  +E  + + + +TA ++E+ +AD+ A   +FG +  DF
Sbjct:   52 LNQFGLDDWKISAPLIAALSIPALSKGVYVINEETQLAACFFLFCTSVYKFGGDAIASYFDARASAILSEHNAVEDANIQLAKETLETHKSLLNIHEDVAAVAEAHKEAVKLLCEVQAYKLKHKTRETFVKNLESIRQIEASYNIELQKAMVASATDKVRVTLEKGDKNIKAAAFKHALDILSEAPVDEAKEDDVAALFAKELRAYAEALEGKQGQMIPLTAAEQEELQADLDAYMKRFGLEDADF 297
[Close]
BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: G4YZC6_PHYSP (ATP synthase subunit b n=17 Tax=Phytophthora TaxID=4783 RepID=G4YZC6_PHYSP)

HSP 1 Score: 104 bits (259), Expect = 6.460e-21
Identity = 81/246 (32.93%), Postives = 125/246 (50.81%), Query Frame = 2 
Query:  239 IEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVES-DKKLKKAALDNALMALADP-TSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKAIFAKFGDDPTDF 970
            ++QAGL   +   P+   L +PA+   FYV++ E+ L  CFF+F   A   GGE  +   D++A  IL   N VE   +      LE HK  L   EDI A+ EA   +     E+ +   RHK R+  VK L++ +        EL+++ V  +  ++ A VE  DKKLK AA  NAL  L +      K+D V+ +FT   R  AA +E  + + V++T  ++ + +AD+ A   +F  +  DF
Sbjct:   52 LDQAGLTDWKISAPIIGALAIPAISNHFYVLNEESQLACCFFLFCSAAYKFGGEMIASYFDERAAAILGEHNAVEDANLNLAKETLETHKAMLNIHEDIAAVAEAHKEAVALMCEVQAYKLRHKTRDTFVKNLESIREIEASYNLELQKSMVANATSKVRAVVEKGDKKLKDAAFKNALDVLGNAKVDENKEDDVAALFTKELRAYAADLEAKQGQVVKLTEAEQSELQADLDAYMKRFDLEDADF 297
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BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: A0A0P6GQH4_9CRUS (ATP synthase subunit b (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6GQH4_9CRUS)

HSP 1 Score: 100 bits (249), Expect = 9.440e-20
Identity = 74/245 (30.20%), Postives = 126/245 (51.43%), Query Frame = 2 
Query:  239 IEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVES-DKKLKKAALDNALMALADPTSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKAIFAKFGDDPTDF 970
            + Q GLD  +   P+A  L++P + +  YV++ E+ L  CFF+F       GG+A +   D ++  IL   N VE   I+     LE HK  L   EDI A+ EA   + +   E+ S   +HK R+  VK L++ +        EL++A V  +   + A +E  DK +K AA  NA+  L+   +  K+D V+ +F    R  A ++E  + + +Q+TA+++ + +AD+ A   +F  +  +F
Sbjct:   34 LTQYGLDDWKISAPIAAALSIPLLSKGVYVLNEESQLAACFFLFCTSVYKFGGDAIASYFDARSAAILSEHNAVEDANIQLAKETLETHKAMLNIHEDIAAVAEAHKAAVELMCEVQSYKLQHKTRDTFVKNLESIRQIEASYNFELQKAMVANATKNVRAFLEKGDKNVKAAAFKNAIDVLSQVETGDKEDDVAALFAKELRAYATSLEAKQGQVIQLTADEQAELQADLDAYMKRFDLEAANF 278
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BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: A0A5D6XSJ4_9STRA (ATP synthase subunit b n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSJ4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.560e-16
Identity = 76/246 (30.89%), Postives = 120/246 (48.78%), Query Frame = 2 
Query:  221 PKVH-SFIEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVE-SDKKLKKAALDNALMALADP-TSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKAIFAKF 949
            P VH   + Q GLD  +   P+   +++PA+   FYV++ ET L  CFF+F       GG+A +   D +A  IL   N VE   I      L  H+  L   EDI A+ +A   +     E+ +   RHK RE  VK L++ +        EL+++ V  +  ++ A VE  DK LK AA  +AL  L+       KQD ++ +F+   R  A  +E  + + V  T  ++++ +AD+ A   +F
Sbjct:   47 PAVHPGLLTQYGLDDWKISAPIIGAISIPAISNGFYVLNEETQLACCFFLFCTSVYKFGGDAIASYFDARASAILSEHNLVEDANIALAKETLATHESLLAIHEDIAAVADAHKEAVALMCEVQAAKLRHKTRETFVKNLESVREIEASYKLELQKSMVSSATKKVRAVVEMGDKNLKAAAFKHALDILSQTDVDDGKQDDIAALFSKELRAYAEALEAKQGQVVHFTEAEQKELQADLDAYMKRF 292
[Close]
BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: K3X6I4_GLOUD (ATP synthase subunit b n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6I4_GLOUD)

HSP 1 Score: 89.7 bits (221), Expect = 6.140e-16
Identity = 72/248 (29.03%), Postives = 124/248 (50.00%), Query Frame = 2 
Query:  236 FIEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVES-DKKLKKAALDNALMALADP-TSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKAIFAKFGDDPTDFI 973
            F+ Q GLD  +  +P+   +++PA+   FYV++ ET L+ CFF+F       GG+A +   D +A+ IL   N VE   I      L  H   L   EDI A+ EA   +     ++ +   RHK R+  VK L++ +        EL+++ V  +   +   VE  DK LK AA  +AL  ++      +K+D ++ +F+   R  A  +E  +   VQ+T  ++++ +AD+ A   +F  +  +F+
Sbjct:   53 FLTQYGLDDWKISMPIIAAISIPAISNGFYVLNEETQLVCCFFLFGTSLYKFGGDAIASYFDARANAILSEHNLVEDANIALAKETLSTHASLLNIHEDIAAVAEAHKEAVALMCQVQAAKLRHKTRDTFVKNLESIREIESSYNLELQKSMVASATKNVRVVVEKGDKALKAAAFKHALDIISQADVDESKEDDIAALFSKELRTYAEGLEAKQGTVVQLTEAEQKELQADLDAYMKRFDLEDAEFV 300
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BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Match: F0W442_9STRA (ATP synthase subunit b n=2 Tax=Albugo TaxID=65356 RepID=F0W442_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.590e-10
Identity = 66/236 (27.97%), Postives = 112/236 (47.46%), Query Frame = 2 
Query:  233 SFIEQAGLDTPQRYLPLALFLTVPAVVQEFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEGIEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHREKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVA-KVESDKKLKKAALDNALMALADPT-SAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKSEADIKA 934
            S +E+ GLD  +   P+ + L VP + +  YVI+ ET L  CFF+F       GG+A S   D +A  IL+  N VE   I+     L+ H+  L   +D+  + EA   +     ++ +   RH+ R   +K LDA KS   +    L+ A + K+   + +  V+  K  K AA  +AL  L+       K+D ++ +F    R  A  +E  +   V ++  ++   ++D+ A
Sbjct:   46 SLLEKYGLDDWKVTAPIGVALAVPILSKGIYVINEETQLAACFFLFCTSVYKFGGKAISSYFDARAQAILQEHNAVEDANIELAKETLKAHESLLAIRDDVALVTEAHKDAVALMCQVQAYKLRHETRITFIKNLDAIKSIEDECNAALKAALIRKATENVRSILVKGGKPTKAAAFKHALNILSQSDMDDEKEDEIAALFAKELRSCAEKLEAQQGSVVTLSEAEQAAFQSDLDA 281
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig128.1757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FTS0_ECTSI2.640e-7646.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CD66_9STRA1.580e-2629.49ATP synthase subunit b n=1 Tax=Tribonema minus Tax... [more]
A0A8K1CIZ6_PYTOL2.730e-2331.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BDW7_PYTIN3.530e-2132.52ATP synthase subunit b n=1 Tax=Pythium insidiosum ... [more]
G4YZC6_PHYSP6.460e-2132.93ATP synthase subunit b n=17 Tax=Phytophthora TaxID... [more]
A0A0P6GQH4_9CRUS9.440e-2030.20ATP synthase subunit b (Fragment) n=1 Tax=Daphnia ... [more]
A0A5D6XSJ4_9STRA4.560e-1630.89ATP synthase subunit b n=1 Tax=Pythium brassicum T... [more]
K3X6I4_GLOUD6.140e-1629.03ATP synthase subunit b n=1 Tax=Globisporangium ult... [more]
F0W442_9STRA3.590e-1027.97ATP synthase subunit b n=2 Tax=Albugo TaxID=65356 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig128contigH-paniculata_contig128:21582..27510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.5
Seed ortholog evalue1.6e-56
Seed eggNOG ortholog2880.D7FTS0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
EggNOG OGs2CWB7@1,2RU2Z@2759
Ec32 ortholog descriptionATPase, F0 complex, B chain/subunit B/MI25
Ec32 orthologEc-14_001070.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1911
Cds size858
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig128.1757.1prot_H-paniculata_contig128.1757.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig128 22614..26623 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929000.7125423-UTR-H-paniculata_contig128:21581..216821622929000.7125423-UTR-H-paniculata_contig128:21581..21682Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig128 21582..21682 +
1691480697.0702193-UTR-H-paniculata_contig128:21581..216821691480697.0702193-UTR-H-paniculata_contig128:21581..21682Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig128 21582..21682 +
1622929000.7270892-UTR-H-paniculata_contig128:22548..226131622929000.7270892-UTR-H-paniculata_contig128:22548..22613Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig128 22549..22613 +
1691480697.0826108-UTR-H-paniculata_contig128:22548..226131691480697.0826108-UTR-H-paniculata_contig128:22548..22613Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig128 22549..22613 +
1622929001.1439614-UTR-H-paniculata_contig128:26623..275101622929001.1439614-UTR-H-paniculata_contig128:26623..27510Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig128 26624..27510 +
1691480697.1654127-UTR-H-paniculata_contig128:26623..275101691480697.1654127-UTR-H-paniculata_contig128:26623..27510Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig128 26624..27510 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929000.7396815-CDS-H-paniculata_contig128:22613..226941622929000.7396815-CDS-H-paniculata_contig128:22613..22694Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 22614..22694 +
1691480697.093605-CDS-H-paniculata_contig128:22613..226941691480697.093605-CDS-H-paniculata_contig128:22613..22694Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 22614..22694 +
1622929000.7528749-CDS-H-paniculata_contig128:23189..233691622929000.7528749-CDS-H-paniculata_contig128:23189..23369Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 23190..23369 +
1691480697.1081235-CDS-H-paniculata_contig128:23189..233691691480697.1081235-CDS-H-paniculata_contig128:23189..23369Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 23190..23369 +
1622929000.7660103-CDS-H-paniculata_contig128:23864..239151622929000.7660103-CDS-H-paniculata_contig128:23864..23915Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 23865..23915 +
1691480697.1245735-CDS-H-paniculata_contig128:23864..239151691480697.1245735-CDS-H-paniculata_contig128:23864..23915Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 23865..23915 +
1622929000.7759092-CDS-H-paniculata_contig128:24354..244651622929000.7759092-CDS-H-paniculata_contig128:24354..24465Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 24355..24465 +
1691480697.1343844-CDS-H-paniculata_contig128:24354..244651691480697.1343844-CDS-H-paniculata_contig128:24354..24465Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 24355..24465 +
1622929001.0971-CDS-H-paniculata_contig128:25071..252061622929001.0971-CDS-H-paniculata_contig128:25071..25206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 25072..25206 +
1691480697.1416845-CDS-H-paniculata_contig128:25071..252061691480697.1416845-CDS-H-paniculata_contig128:25071..25206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 25072..25206 +
1622929001.1117487-CDS-H-paniculata_contig128:25882..260381622929001.1117487-CDS-H-paniculata_contig128:25882..26038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 25883..26038 +
1691480697.1492069-CDS-H-paniculata_contig128:25882..260381691480697.1492069-CDS-H-paniculata_contig128:25882..26038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 25883..26038 +
1622929001.1269886-CDS-H-paniculata_contig128:26479..266231622929001.1269886-CDS-H-paniculata_contig128:26479..26623Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 26480..26623 +
1691480697.1570828-CDS-H-paniculata_contig128:26479..266231691480697.1570828-CDS-H-paniculata_contig128:26479..26623Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig128 26480..26623 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig128.1757.1

>prot_H-paniculata_contig128.1757.1 ID=prot_H-paniculata_contig128.1757.1|Name=mRNA_H-paniculata_contig128.1757.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp
MSTKEKIDWYAAQPLFHMPKVHSFIEQAGLDTPQRYLPLALFLTVPAVVQ
EFYVIDAETLLMGCFFMFLGCAIDMGGEAFSKMADDKADRILKAFNDVEG
IEIKELTADLEMHKLKLGAAEDIQAIYEARCLSEQREAEMLSLMERHKHR
EKMVKMLDAFKSGRLKRINELRQAEVEKSLLEIVAKVESDKKLKKAALDN
ALMALADPTSAAKQDPVSQMFTTYWRENAATMEKNKDKPVQMTAEQREKS
EADIKAIFAKFGDDPTDFINNLPASYKPSDANLLC*
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mRNA from alignment at H-paniculata_contig128:21582..27510+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig128.1757.1 ID=mRNA_H-paniculata_contig128.1757.1|Name=mRNA_H-paniculata_contig128.1757.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5929bp|location=Sequence derived from alignment at H-paniculata_contig128:21582..27510+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGAATGGGACGAGGGTCAACCTTCGCGCGCGCACTCCCGCGGCGAGTG
GACGGACTACCACTCCCCTTCTCCAGCCCGCTTACCAGAGCTTTCACGCA
GGTACATTTAATATTCACACGAAGGTGGTCCCTGTTAAAACGTGGATCTA
ACGAGGTCAACTTCTGGCCGTGTGTGTGCCCCTTTCGAGGATATTGGTGA
CCGTTAAATCATGACAATCGAATGAACAAAATATTCAAATGATGAAAATG
AGCACTCTGTGAAAGGAGGTCGCAAAAGAGCAGGATTATCACACCGTTCA
CCGTAGGCGGTACGGTAGATGACGATGCACGGTACCCTAGTCGTTATTTC
TCTTGCTAACTTGAACTAGTAGGAAGAAGGACGTGGGGTCTTCTAAGAGT
CCATCTGTTGATTCGACCACACCGGACAAATCATGTCCGGGGTTCCATAC
TACATCTGGAATACGTGTTTAGGTTTCAGTTGTCAATCCACACGGACCTT
GCACAAATGTTCACTGGAGGCCGGGTGACGGGTTTCTCGAGTGGACTTAT
TTCCTCATATCAGTCACCCGCGAGCGCGTTAAGGTGAAATAAAAGTTGGT
TCTCTCTTCGTGGCAGGCGTCGGTGCCTTCTGAGGCTCGCGTGGACAACA
AGCGCCCTGATACGTCTCTTTGATGACATAATTCGCCGCGATTAGTTTCG
AGACAGAAACAATTGAATATACCTTTTGGTTTTTGTGTGGCCTTGACGTT
GCTGATGGTTGCATGAGGCACTACTGTTAAAAGATGACACGGTCAAAGTG
CTGTCCTGTGGGAGTGTATTTGTCCGTGAGTACATGTATCTTAGTTCGAA
ACACACGAACAAGAAGCCACCTTACGGGGATTATCTCATTGTGAGTACGT
GTTTCCTCACTCGAGTGTCCGTGTGAATATTTGCTCACTATTTTTGCGTG
ATCCTACTGGATGGCAGGTACTCCTCGAAGGGATAGTGCCGTGCAGAAGC
TCGAGGCGGAGCGTGATGCGGTGATTGGCAGAATGAGTACCAAGGAAAAG
ATTGACTGGTACGCCGCCCAGCCACTATTTCATATGCCCAAGGTCCACAG
CTTCATTGAGCAGGTGTGCCCCAGTATGATGAAAACCTACAACCGAGCTG
TGTCCTGTCATCTTGTTGTGTTCTGGGTGGAAGCCAAGGCGGTCACGGTC
TTTCGTGTCGAAGTTGATGTGATGGATCAGCAGGTTCAGGAGTTCTTCAC
AGTACTCGTCGCTGCTCAGTACCGCAAACATACCTGAGAAATTCAATCGA
GATGAACATCTTCGTGTGCCCATACGTGTTGAGTTTTATTCACGTATGAT
TTTCGTAAAATTCGGTGACGACTTGTGCAGACGGAAGAGAAAAGTAGCAC
CTCTTGCGGTACTGTAGCTAGATTTATACGGAAAACTTGTTGGACAGCTT
GGAAATGCAAATGTTTTTTCTATTCCAGTGCTAAACTTATTGAAAAGTAG
TGCTTCCGTCTATGAGTTCAACACTACCTCGCGTTCCCCTCCTCGTCCCC
ATCGTACCCTTGCTGGCGTCGCCGCCGCGTTCATGTGTTCGTTGTTTCGA
AAATCAAGGCCGGGCTGGACACCCCGCAGCGTTACCTCCCCCTCGCCCTG
TTTCTTACAGTTCCCGCGGTAGTCCAGGAGTTTTACGTAATCGATGCGGA
GACGTTGTTGATGGGATGTTTCTTCATGTTCCTCGGGTGTGCCATTGACA
TGGGCGGCGAAGCTTTCTCCAAGATGGCGGACGACAAGGTGATTAGAAGA
AAAATATGGTGACAAAATGTCCCCCGCCCCGACACAGGCTCTATCCACAT
ACAATACCCAAATACGGAAAGAGAATGACGTTACCTATTTTCGAGATCAG
TTTCGAATCCCGCAGATTTTTCGAAAGGAGGGAAGGATATCTACATGTGC
CGTAATTTTGATTCCCGATGCTCCCAACCACAGATATTAGTTTGCTTGGC
CTGTTGTAGGTGCAGTGAGTGGGCTGTGTAGAAGGTGAGAAATGGTTGCT
CGTTTTAGGGATATTTCTGTATAGCTCTGAACAGTTATCCCTTATATGTG
TGGAGGTTTTAATTGGGAATAGTGGAAGTTATTGCACTTACCGTTGGAAC
GCATTTTGAGGAGGTCGTCGTCTGTTTCCGAGGAGAAGCGGTCAGGGCGC
TAACAACTGCATTGAGTCGAAGTCTGTCACTCCTGCTGTTTCCCCCCCCC
CGCCTCCCCGTCATGCCCGCTGTATTGTAACAGGCCGATCGAATCCTGAA
GGCGTTCAACGATGTGGAGGGAATTGAGATCAAGGTATGCGACACTCGAT
AATTGCTGTCAACACGTCTTTTAATAACATGTGTAACCCATGAGTAGGGA
CGATGGAGATTTGGAGGAGGCAGAGAATATGGAGGAGGGTGTCCGACCGT
GTAGTTCTGCACCTCTGGAGTGATTGAATATACGTCCCCCAGAGAAAGGA
GGAAGAACTGTGCCCGCAAGAGCTGTCGACGAATCGTTTGTTCACAAATG
ATCGTATAGTGACCTATTTATTGTTGGGCTAGTAACTCTTCAATACCTGA
TGGCTTTTGTTTCGTACCCGCAACCTTGTGGACGGGGTGGGGGAGGGGCG
GGGGTAGGGGGGTTTTCTTCGTTGATAATCCGTCGCTAGTACTGTTGGGA
GCATACCTTACTCATGGCCCCTCAAAAGTAATTATGGATCACGCTAGCGT
GACAATTTATGTTGATGTCACAGGAGCTTACGGCTGACCTGGAGATGCAT
AAGCTCAAGCTAGGGGCTGCGGAAGATATCCAGGCCATCTACGAGGCTAG
GTGCTTGTCAGAGCAGCGTGAGGCTGAGATGCTGGTAAGATTGTGTTCGC
TCTTGTTTTGTGTTGTCTTGTAATTCCTTCGAGGACCCGCTAGGATTCAC
GGGGGGGGAACTAAGGAGTATGACCAGTAGTGCCAGGATCGACTGTGCGG
AACGGTGGTGTCGGCATCATACTGTTCGCACGCTTGACGTGTCTTCGATG
TGTCGTATGACCTAGGCTTGCCATTTTTGCTGTTATGTTGCCCACGTGGC
GTGATGAGAAAAGAAACAGTTGATTGTTCCCGTCTTGCTCTATCATCGTT
GGTCCGTTCTCGGAAGGAGAATTGACGATATGAAAACTACTGTGTTACGC
AGTTTTTCATCGATTTTTGACACAGAAGTATATGTTGTGTTGATACCTTC
GAATAACCAGTTGCTTCCTCAGCGAGGGTCACTTACAGAAGGGTCGGAGG
ACGCGGAATGCACAAGTCAACCGGTATCTCTTGATAGGATGGTCCTATTC
ATGCGATATTCCAGTATGAGCCAACATGTGTTAACCTTGAAAGAAGAAAT
GTAGGGGGCGGCATTCGAAAACGAGAATATACTTTCCCTTAAAATTTGTG
GTGGGGGCACATTATGCTGTTCTTGTTGGTGCCTGTGCAGAGCCTGATGG
AGCGCCACAAGCACCGAGAGAAGATGGTGAAGATGCTTGATGCCTTCAAG
TCGGGTCGCCTGAAGCGCATCAACGAACTGCGCCAAGCTGAGGTGGAGAA
GTCTCTTCTAGAAATCGTGGCGAAGGTGTGTGTATGGAGGGTACTCGAAC
CTTTTCAAGGTCGTCGCAGTACAGTGCGATTTACAGTCTGTCGGGAGTAT
AAGCTGGTCGTGCCGTGTATCTAGTAAGGAATCTGGAATTTATACTGTGA
GACAACATTCAGTATTTCCGCTTGGCCCCGACATGGTACTGAGTGTGTAT
CTTTAATTTGGCGCTGTTGTACATGTGGAAGTATCGAGTCGAAATCATAG
TCGTACGATTACTATTCTGTCATTCGTTGTCTGGTCACCGAGTCCTTCTA
GAAGGCAAGGATGACGCGTATTTGCTGTATATTTTGTCTTGTCTAGGATA
GGTCTTTTTCGATGACATCACGACGAATACTAAAAATTAGGGATGTAGAG
TTGGCAACTTCGAGATATTTATGTTGAAAAATCCAAATATCGCAGTAGTA
CTTGCATTTCAAGAGAGCAAACAGAACAAGCCCTTGAACTCCATTCTTGT
ACCTGATGGATCACGACCAAGAAGTCATGCACAGCAAATCCCGTCACCGA
CCGCATTTCGCAGGTGGTTGGCTTGCATTGAAACACGTCTCGCGCGAAAA
CTGGCGTGCGGTTATAAACAAGAAGGCCGCAAAAACGATTGGATCGGGTG
ATACATGCCCGTTAAGTTTCCGCTGAATTCTCGTTGCGGCCAATGTGACA
GGTGGAGTCAGACAAGAAGCTGAAGAAGGCTGCGCTCGACAACGCTCTCA
TGGCGCTGGCGGACCCTACCTCGGCTGCAAAACAGGACCCCGTGAGCCAG
ATGTTCACCACGTACTGGAGAGAGAACGCAGCGACCATGGAAAAGAACAA
GGATAAGGTATGTCTACATTATGGAATGCCTTCCTGACTGACAAGTACAA
GAAAGGACAACATCGAGACGTGCTTGATATCCTGGGAAACTTTTTGTTGG
TTGTTGGGGAGTGTGGCGTTCATGGAAACAACTCAAGATAGCGTTTGAAA
TCCCGGGTTCGGACATTATCTGGAGTCTTTTTTCGTTTTGGCGTTTTTCA
CACCGAAAACTTTTGAAAGACTCAGGCTCGTGACTTTTGAATTTAAATTC
CAAAATAGGTGGTTGTTTTGTATTGCCCAGTTGGTCCAGATGGACTAGCG
TTCGGGACCTAGAGCTCCCTTTTGGTGATACTAGGACCAAATCTAAATTC
CTGAAAGGTGAAAATAATTTTTGAGTTTATTCGCCATATATGAGCATCAT
CCAACGCTCGACTTCCTTGCGGTGTCCTTGCAAACGAAAAAAAAACAGCC
GGTTCAGATGACAGCAGAGCAAAGGGAGAAGAGCGAAGCCGACATCAAGG
CCATTTTCGCGAAGTTCGGAGACGACCCCACCGACTTCATCAATAACTTG
CCCGCCTCCTACAAGCCATCCGACGCGAACCTTCTTTGCTAATATCTGGA
AAGGAAAAAGGAAGCTGCCGCTGATGCAGCCATCTTAGGCGAGGGGGGAT
AGTGGTATAAATCATCTCGCTGTTTCGGGCATCGCAAGTCATGTGAACAT
ATACAAGCTAGTGTTTGCACCGGGCAGTTCATACACTCGGGCGAGTTGAT
GCGATTTCATTCTTATCGCGCAGGGCAGGGGAGGACATGGGAGATTTTAT
TCGTATTGTGCGCACCTGGAAGGATGTTGGAATGACGAAGTCCGGGATAT
AAACGAACGTCGTACGATGGCTTTTCGATGATGGGTCAAGAAGTAGTCGA
CTCCTGGATAAAAGGTTGTCGAGATGAAGCTTGAAAGATTGTAGAAGAAG
TGGAGAAGGAACGAGCCACTTGATCGATGGTCGAAATGCACACTTTAATG
ATTGTATGGTTTGTCGAGGAAAAGCTACGTCCACATGGGACGTTCAATGT
GACGCATATTTCACGCGCAGGTCATCAAAACCCATCACTGTTGAGTATTT
TGACCTCCCGCTTGATTTTGAACGAATCGCTGGTGCCTTCGCTGGCTGCG
TATGTGTACCCACCTGATACTTCTTTCTTGCGATTAGCGATGTACAGTGG
TGAAGCACACGTTGTCTACAAAGTCTTATGAGCAGTCCAGTGGTGTTACT
CGTGCAGTTCGAGTTTCCTCTAAGATGCTTTTGTCCCCGTTTGCCTACGT
GAGGCAGAGAATATCTCGTGACTCATGTTTGTACGGAGGCGAGGCGCAAT
AGCCCGTTGGCTTCCTTGAGTTTTTATTCCAAGCGTTCAACACGTCTCGT
TGGGGATGAAATAACGTTAAATTTGAATGGAACACTTCAAAAATAGTGCT
AGCGAAAGGCTCTTCGAGTCCATGTCGAT
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Coding sequence (CDS) from alignment at H-paniculata_contig128:21582..27510+

>mRNA_H-paniculata_contig128.1757.1 ID=mRNA_H-paniculata_contig128.1757.1|Name=mRNA_H-paniculata_contig128.1757.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig128:21582..27510+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTACCAAGGAAAAGATTGACTGGTACGCCGCCCAGCCACTATTTCA
TATGCCCAAGGTCCACAGCTTCATTGAGCAGATGAGTACCAAGGAAAAGA
TTGACTGGTACGCCGCCCAGCCACTATTTCATATGCCCAAGGTCCACAGC
TTCATTGAGCAGGCCGGGCTGGACACCCCGCAGCGTTACCTCCCCCTCGC
CCTGTTTCTTACAGTTCCCGCGGTAGTCCAGGAGTTTTACGTAATCGATG
CGGAGACGTTGTTGATGGGATGTTTCTTCATGTTCCTCGGGTGTGCCATT
GACATGGGCGGCGAAGCTTTCTCCAAGATGGCGGACGACAAGGCCGGGCT
GGACACCCCGCAGCGTTACCTCCCCCTCGCCCTGTTTCTTACAGTTCCCG
CGGTAGTCCAGGAGTTTTACGTAATCGATGCGGAGACGTTGTTGATGGGA
TGTTTCTTCATGTTCCTCGGGTGTGCCATTGACATGGGCGGCGAAGCTTT
CTCCAAGATGGCGGACGACAAGGCCGATCGAATCCTGAAGGCGTTCAACG
ATGTGGAGGGAATTGAGATCAAGGCCGATCGAATCCTGAAGGCGTTCAAC
GATGTGGAGGGAATTGAGATCAAGGAGCTTACGGCTGACCTGGAGATGCA
TAAGCTCAAGCTAGGGGCTGCGGAAGATATCCAGGCCATCTACGAGGCTA
GGTGCTTGTCAGAGCAGCGTGAGGCTGAGATGCTGGAGCTTACGGCTGAC
CTGGAGATGCATAAGCTCAAGCTAGGGGCTGCGGAAGATATCCAGGCCAT
CTACGAGGCTAGGTGCTTGTCAGAGCAGCGTGAGGCTGAGATGCTGAGCC
TGATGGAGCGCCACAAGCACCGAGAGAAGATGGTGAAGATGCTTGATGCC
TTCAAGTCGGGTCGCCTGAAGCGCATCAACGAACTGCGCCAAGCTGAGGT
GGAGAAGTCTCTTCTAGAAATCGTGGCGAAGAGCCTGATGGAGCGCCACA
AGCACCGAGAGAAGATGGTGAAGATGCTTGATGCCTTCAAGTCGGGTCGC
CTGAAGCGCATCAACGAACTGCGCCAAGCTGAGGTGGAGAAGTCTCTTCT
AGAAATCGTGGCGAAGGTGGAGTCAGACAAGAAGCTGAAGAAGGCTGCGC
TCGACAACGCTCTCATGGCGCTGGCGGACCCTACCTCGGCTGCAAAACAG
GACCCCGTGAGCCAGATGTTCACCACGTACTGGAGAGAGAACGCAGCGAC
CATGGAAAAGAACAAGGATAAGGTGGAGTCAGACAAGAAGCTGAAGAAGG
CTGCGCTCGACAACGCTCTCATGGCGCTGGCGGACCCTACCTCGGCTGCA
AAACAGGACCCCGTGAGCCAGATGTTCACCACGTACTGGAGAGAGAACGC
AGCGACCATGGAAAAGAACAAGGATAAGCCGGTTCAGATGACAGCAGAGC
AAAGGGAGAAGAGCGAAGCCGACATCAAGGCCATTTTCGCGAAGTTCGGA
GACGACCCCACCGACTTCATCAATAACTTGCCCGCCTCCTACAAGCCATC
CGACGCGAACCTTCTTTGCTAACCGGTTCAGATGACAGCAGAGCAAAGGG
AGAAGAGCGAAGCCGACATCAAGGCCATTTTCGCGAAGTTCGGAGACGAC
CCCACCGACTTCATCAATAACTTGCCCGCCTCCTACAAGCCATCCGACGC
GAACCTTCTTTGCTAA
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