mRNA_H-paniculata_contig12786.1747.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12786.1747.1
Unique NamemRNA_H-paniculata_contig12786.1747.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: D8LEZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ5_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 4.280e-144
Identity = 212/288 (73.61%), Postives = 246/288 (85.42%), Query Frame = 2
Query:  302 ATKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPESLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARRSM 1165
            A KDV+SSIFGSAACVYTGQPLDTIKVRMQARPDAFSG +QCLRRTLAEE IT+LWKGSTPAL GAV+ENMVAFGVNEQLKR+FPD     G++ PWWQ I+FGG TG+FTTVV+CP+DVIK KVQV RS++         E+  LP LNA+ M  H+LRTQGVRGLFVGLGAQFARDVPFYA+FFGTY+TVV+ GKALP++I  E+LY  AGGMAGVVGWAAVMP+D+ KSIIQT+ KPESL++T+  V +TKGW++LF GLNAAL RAFPANAALFLGYE+ RR++
Sbjct:   14 AAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKD---GSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSANAEAKGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQTVVRTKGWQALFIGLNAALARAFPANAALFLGYEIVRRAL 298          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A836CAY2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY2_9STRA)

HSP 1 Score: 266 bits (681), Expect = 7.550e-79
Identity = 144/286 (50.35%), Postives = 185/286 (64.69%), Query Frame = 2
Query:  311 DVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQ-TSSKPESLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARRSM 1165
            +  +SIFGS AC+YTGQPLDTIKVR+QA P+AFSG  QCLR T+++E + +LWKG+TPALSGAV+EN+VAF +N++LK L+P   R     P     + +G  TG  T V LCP DVIKC+VQV+R          G  + R P  NA EM + ++RT+G+RG + GL AQ ARD  F++ FFG YD +VE         P E+ Y+ AGG+AGV GW   MP D  KS +Q T   P SL      +    G R+LF G+    VRAFPANAALFLGYEVA+R++
Sbjct:   10 EAAASIFGSFACIYTGQPLDTIKVRIQATPEAFSGAMQCLRTTISQEGVASLWKGATPALSGAVVENIVAFAINKELKLLWPPSDRHAAVQP-----VAYGAVTGAVTAVALCPFDVIKCRVQVAR----------GTAARRAP--NAVEMAQLMVRTEGMRGFYRGLRAQVARDALFFSMFFGVYDVLVEQAMRRT-SFPREVAYIGAGGLAGVAGWLLSMPFDVLKSRMQVTPHGPRSLSAVARPLVAAGGPRALFAGVTVTCVRAFPANAALFLGYEVAKRNL 277          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A4D9CU68_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU68_9STRA)

HSP 1 Score: 248 bits (632), Expect = 1.320e-71
Identity = 138/250 (55.20%), Postives = 171/250 (68.40%), Query Frame = 2
Query:  446 EERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPD---------DTRPKGAAPPWWQSIVF----GGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPESLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVAR 1156
            EE + ALWKGS PAL GAV EN VAF VN+QLKR+  D           +    A    +S+V     GG TG+FT+  LCP+DVIKCKVQVSR++     T          A++A EM+ HVL+TQGV+GLFVGLGAQFARD+PFYA FFGTY+  +   KA    +P E  Y+ AGG+AGV GWAAVMP+D AKSIIQTS  P+SL+ T+M V +T+G  +L++GL  A+ RAFPANAALFLGYE+AR
Sbjct:   52 EEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRILADLEGYGLGNESNQESSKAEAKEESLVVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGET----------AMDAQEMLVHVLKTQGVKGLFVGLGAQFARDIPFYAFFFGTYELSLVALKAYT-TMPQEGAYLVAGGLAGVAGWAAVMPIDMAKSIIQTSPNPKSLIPTMMDVAQTRGPMALYSGLGVAVFRAFPANAALFLGYELAR 290          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S2S5V7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V7_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.770e-66
Identity = 125/290 (43.10%), Postives = 177/290 (61.03%), Query Frame = 2
Query:  308 KDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRP-KGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPESLMK---TIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARRSM 1165
            KDV +S+ G+ AC YTGQP DT+KVR+QARPD ++G+ Q   +T   E + ALWKGS   ++G +MEN  AFGVNEQLKR+FP   +   G A   +Q  + G  TG   +  LCP++++K + Q    L+ A     G     L A  + ++++ V R QG+ GL+ G+ AQ ARD  FYA FFG+Y+ +V   +     +P E  +  +GG+AG++GW  VMP+D  KSIIQ   +   +        +V +T+G   LF+G   ALVR+FPANAALFLGYE+ RR +
Sbjct:   17 KDVAASVVGAVACCYTGQPFDTVKVRLQARPDEYTGMMQTFYKTAEAEGVAALWKGSVAVVTGMIMENAAAFGVNEQLKRVFPQSAQDLDGGAQGLFQPFMLGALTGSLVSFALCPSEIVKTRTQ----LEVANAKTSG-----LKAPTSMDILKKVWRLQGMAGLYTGIDAQIARDGLFYAVFFGSYEILVRAFRKHT-SLPDEANFFISGGLAGMLGWGFVMPVDVPKSIIQGDWRARPVGDFGGAFSEVFRTRGLSGLFSGSFPALVRSFPANAALFLGYELTRRGL 296          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S2URT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URT5_9STRA)

HSP 1 Score: 224 bits (572), Expect = 4.040e-63
Identity = 122/291 (41.92%), Postives = 169/291 (58.08%), Query Frame = 2
Query:  305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGA--APPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARRS 1162
            ++DV S+  GS  C YTGQPLDTIKVRMQ  P  ++GV Q   +T+ EE + ALWKG+ P   G  +EN VAFGVNE LKR FPDD   K A   P   +  + G  TG  + +VL P++VIK K QV          +G        +L++ ++++ +++ QGVR LF G  AQ  RD PFYA FFG Y+      +     +P EL +  +GG+AG+ GW   MP D  K+ +Q     +   S    ++K+ + +G   L++GL   LVRAFPANAALFLG E+ +R+
Sbjct:   11 SRDVFSATLGSVCCCYTGQPLDTIKVRMQTNPHLYTGVIQTFSKTVGEEGVAALWKGAVPTAVGMALENAVAFGVNEALKRAFPDDPAAKNADERPDLLKPFLMGSITGCCSAIVLLPSEVIKAKTQVE---------IGS-------SLSSKDILQKMIKKQGVRSLFCGFDAQLMRDAPFYAVFFGGYELSCYLFRTHVPSMPEELNFFLSGGLAGMFGWTVAMPFDVPKTNVQARYDTKVFGSYFPEMIKIARERGVVGLYSGLGPTLVRAFPANAALFLGVEMGKRA 285          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S2L363_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L363_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.410e-59
Identity = 116/289 (40.14%), Postives = 167/289 (57.79%), Query Frame = 2
Query:  305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGAA-PPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159
            T+D+ S+  GS AC YTGQP DT+KVRMQ  P AF  V    +  ++ E I ALWKG+ P   G V EN +AFGVNE LKR FPD+ +      P   +  + G  TG  +  VL P++V+K K QV        G  G          +++++ + +++ QG+R LF+G  AQ  RD+PFYA FFGTY+      +     +P EL +  +GG AG++GWAA MP D  K+ +Q S   +   S    ++++ + +G  +L+TGL   + RAFPANAALFLG E+ ++
Sbjct:   15 TRDIFSASIGSVACCYTGQPFDTVKVRMQTSPAAFPSVLFTSKSIVSNEGIPALWKGAVPTALGMVAENAMAFGVNEALKRTFPDEAKSDPTKRPDLMRPFLMGAITGCCSATVLLPSEVVKAKTQV------VVGNTGA---------SSADIYKKMMKRQGIRSLFIGFDAQIMRDMPFYAFFFGTYELNCYLFRTFVPSMPEELNFFLSGGFAGMLGWAAAMPFDVPKTNVQASWDSKVVGSYFPELIRIVRERGVLALYTGLIPTIARAFPANAALFLGVEMGKK 288          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: B8C9S7_THAPS (Mitochondrial carrier (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9S7_THAPS)

HSP 1 Score: 214 bits (544), Expect = 2.020e-59
Identity = 117/288 (40.62%), Postives = 163/288 (56.60%), Query Frame = 2
Query:  305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159
            T+D+ S+  GS AC YTGQP DT+KVRMQ  P  F  V    +  L  E + ALWKG+ P   G V+EN +AFGVNE LKR FPD ++      P       G  TG  +  VL P++++K K QV          VG V +      +++E+ + ++R  G+R LFVG  AQ  RD PFYA FFGTY+      +     +P EL Y  +GG AG++GW A MP D  K+ +Q S + +   S    ++++ + +G  +L+TGL   + RAFPANAALFLG E  ++
Sbjct:    3 TRDIFSASIGSVACCYTGQPFDTVKVRMQTNPSLFPSVAFTTKSILKNEGMGALWKGAVPTAMGMVLENAMAFGVNEALKRTFPDGSKEDPTQRP-----DLGAITGCCSATVLLPSEIVKAKTQV---------VVGNVSA------SSTEIYKKMIRQSGIRSLFVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWESKVVGSYFPELLRIVRERGVLALYTGLVPTIARAFPANAALFLGVETGKK 270          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S4T4E9_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4T4E9_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.900e-58
Identity = 122/311 (39.23%), Postives = 175/311 (56.27%), Query Frame = 2
Query:  254 DVVHVDRQPSDSAFALATKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPK----GAA--PPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159
            DV+H    P D      ++D+ S+  GS  C YTGQP DT+KVRMQ  P+ +S +++    T+ EE I A WKG+ P   G   EN +AFGVNE LKR FPD  + +    GA   P   +  + G  TG  + +VL P++V+K K QV      A GT           ++++++ + ++R QG + LF GL AQ  RD PFYA FFG+Y+      +     +P EL Y  +GG+AG++GW A MP D  K+ +Q+    +   S    ++++ K +G   L+ GL   LVRAFPANAALFLG E+ +R
Sbjct:    3 DVLH----PRD-----VSRDIFSATVGSIFCCYTGQPFDTVKVRMQTNPELYSSIYKTATTTMGEEGIKAFWKGAVPTAMGMAAENAMAFGVNEALKRAFPDPNKDQFDHNGAQRRPDLLRPFLMGAITGCCSALVLLPSEVVKAKTQV------AVGT----------DVSSNDIFKKMVRKQGYKSLFCGLDAQLMRDGPFYAFFFGSYEMSCFLFRTYVPSMPEELNYFISGGLAGMLGWTAAMPFDVPKTNVQSRYDTQIVGSYFPQMIQITKERGILGLYNGLGPTLVRAFPANAALFLGVEMGKR 288          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S1ZAT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAT6_TRICV)

HSP 1 Score: 212 bits (540), Expect = 6.060e-58
Identity = 115/291 (39.52%), Postives = 165/291 (56.70%), Query Frame = 2
Query:  305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDT---RPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159
            T+D+ S+  GS  C YTGQP DT+KVRMQ  PD + G++Q +++T A E + A WKG+ P   G  +EN +AFGVNE LKR FPD           P   +  + G  TG  +  VL P++V+K K QV        GT  G+ S        +++ + +++ QG++ +F G  AQ  RD PFYA FFG+YD +    K     +P EL +  +GG AG++GW A MP D  K+ +Q+    +   S    ++K+ + +G   L+ GL   L RAFPANAALFLG E+ +R
Sbjct:   64 TRDIFSATLGSVFCCYTGQPFDTVKVRMQTNPDIYGGIYQTIKKT-ASEGVPAFWKGAVPTAMGMALENAMAFGVNEALKRAFPDPNLGAMDPEKPPDLLRPFLMGTITGCCSACVLLPSEVVKAKTQV------LVGTGKGMSS--------NDVFKQMMKKQGIKSIFCGFEAQLMRDGPFYAFFFGSYDMLCYLFKIYVPSMPDELRFFMSGGFAGMLGWTAAMPFDVPKTNVQSRWDTKVVGSYFPELIKIGRERGILGLYNGLGPTLARAFPANAALFLGVEMGKR 339          
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S2NZN3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZN3_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.060e-56
Identity = 112/290 (38.62%), Postives = 163/290 (56.21%), Query Frame = 2
Query:  305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPK--GAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159
            ++D+ S+  G+  C Y GQPLDT+KVRMQ  P  +SG+       +  E  TALWKG+ P   G   EN +AFGVNE LKR FP+D   K     P   +    G  TG  + +VL P++V+K K+QV      A GTV           +A ++M+ +L+ QG++ +F GL +Q ARD  FYA FFG Y+      +     +P EL +  +GG+AG+ GWA  MP D  K+ +Q+    +   S +  + ++ + +G   L+ GL   L+RAFPANAALFLG E+ ++
Sbjct:   11 SRDIFSATIGAITCAYVGQPLDTVKVRMQTMPKVYSGIGTSFAHIVRNEGATALWKGAVPTTLGMTAENAMAFGVNEALKRAFPEDKSSKDVNGPPNMIRPFQMGAITGCCSALVLLPSEVVKAKIQV------AVGTV-----------SARDIMKQMLKEQGIKSMFCGLDSQLARDASFYAVFFGGYELSCYLFRTYVPSMPEELNFFISGGLAGMFGWACAMPFDVPKTNVQSRYDTKVVGSYLPEMGRIVRKRGILGLYDGLGPVLIRAFPANAALFLGVEMGKK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ5_ECTSI4.280e-14473.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAY2_9STRA7.550e-7950.35Mitochondrial carrier domain-containing protein n=... [more]
A0A4D9CU68_9STRA1.320e-7155.20Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S2S5V7_9STRA2.770e-6643.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2URT5_9STRA4.040e-6341.92Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2L363_9STRA1.410e-5940.14Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C9S7_THAPS2.020e-5940.63Mitochondrial carrier (Fragment) n=1 Tax=Thalassio... [more]
A0A7S4T4E9_9STRA1.900e-5839.23Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]
A0A7S1ZAT6_TRICV6.060e-5839.52Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2NZN3_9STRA1.060e-5638.62Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12786contigH-paniculata_contig12786:3755..6488 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.3
Seed ortholog evalue7.6e-121
Seed eggNOG ortholog2880.D8LEZ5
KEGG rclassRC00004,RC02888,RC02997
KEGG koko:K15109,ko:K15397
KEGG TC2.A.29.8
KEGG ReactionR09419,R10825
KEGG Pathwayko00062,ko01110,ko04714,map00062,map01110,map04714
KEGG ModuleM00415
Hectar predicted targeting categoryother localisation
GOsGO:0003333,GO:0003674,GO:0005215,GO:0005290,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006839,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015174,GO:0015179,GO:0015181,GO:0015189,GO:0015238,GO:0015318,GO:0015711,GO:0015802,GO:0015807,GO:0015809,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045117,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0089709,GO:0098655,GO:0098656,GO:1901474,GO:1902022,GO:1902475,GO:1903401,GO:1903825,GO:1903826,GO:1905039,GO:1990822
EggNOG free text desc.mitochondrial transport
EggNOG OGsKOG0758@1,KOG0758@2759
EC2.3.1.199
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Exons1
Model size2734
Cds size930
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12786.1747.1prot_H-paniculata_contig12786.1747.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12786 3993..4922 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928999.3172789-UTR-H-paniculata_contig12786:3754..39921622928999.3172789-UTR-H-paniculata_contig12786:3754..3992Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12786 3755..3992 +
1691480696.4325333-UTR-H-paniculata_contig12786:3754..39921691480696.4325333-UTR-H-paniculata_contig12786:3754..3992Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12786 3755..3992 +
1622928999.3533716-UTR-H-paniculata_contig12786:4922..64881622928999.3533716-UTR-H-paniculata_contig12786:4922..6488Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12786 4923..6488 +
1691480696.4524786-UTR-H-paniculata_contig12786:4922..64881691480696.4524786-UTR-H-paniculata_contig12786:4922..6488Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12786 4923..6488 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928999.3355973-CDS-H-paniculata_contig12786:3992..49221622928999.3355973-CDS-H-paniculata_contig12786:3992..4922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12786 3993..4922 +
1691480696.4445102-CDS-H-paniculata_contig12786:3992..49221691480696.4445102-CDS-H-paniculata_contig12786:3992..4922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12786 3993..4922 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12786.1747.1

>prot_H-paniculata_contig12786.1747.1 ID=prot_H-paniculata_contig12786.1747.1|Name=mRNA_H-paniculata_contig12786.1747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp
MALVEDVVHVDRQPSDSAFALATKDVVSSIFGSAACVYTGQPLDTIKVRM
QARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQ
LKRLFPDDTRPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSR
SLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDV
PFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDT
AKSIIQTSSKPESLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFL
GYEVARRSM*
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mRNA from alignment at H-paniculata_contig12786:3755..6488+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12786.1747.1 ID=mRNA_H-paniculata_contig12786.1747.1|Name=mRNA_H-paniculata_contig12786.1747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2734bp|location=Sequence derived from alignment at H-paniculata_contig12786:3755..6488+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACTGGATACACAACAGTGACAGAACGGACAACCGTACTGTACCTGGAAGG TGAGGCTGTCTTTGCTTCTTGGCGAGCTTGCAACGCACGGTCCCATCGAC TGCATATCATAGTACTACTGCCGAGCACTGTCATTGGACTCTACTGTACT GAATTTGTGCTGTGCTGTGCTGTACTGCACTGTCTCTGCTGTTCGTACTA CAAGGATCTGCACTAACGTTGCTAGTACAGTCTAGTCTATGGCGTTAGTG GAGGACGTGGTTCATGTAGACCGGCAACCAAGCGATAGCGCCTTTGCGCT GGCAACGAAAGATGTTGTCTCCAGCATATTCGGCTCGGCGGCGTGCGTAT ACACCGGCCAACCGTTGGACACTATCAAAGTCCGTATGCAAGCACGACCA GATGCCTTCAGCGGGGTGTGGCAGTGCCTGCGGAGAACCCTAGCCGAAGA ACGCATAACAGCCCTCTGGAAGGGCTCTACTCCTGCGCTGAGCGGCGCCG TCATGGAAAACATGGTCGCGTTCGGCGTAAACGAACAGCTGAAGCGCCTA TTTCCGGACGATACGCGCCCTAAGGGCGCTGCGCCGCCATGGTGGCAGTC CATTGTATTCGGCGGCGCAACCGGCCTATTCACCACCGTTGTGCTTTGCC CCAACGACGTAATCAAGTGCAAGGTACAGGTTAGTCGGTCTTTGAAAGCA GCTGAAGGGACAGTGGGCGGCGTTGAATCTTTGCGGTTACCGGCGCTCAA CGCTAGTGAGATGATGAGGCACGTGCTGCGCACGCAGGGAGTTCGAGGCT TGTTCGTGGGGCTGGGGGCACAGTTTGCGCGTGACGTGCCGTTTTACGCG TCGTTTTTTGGCACGTATGACACGGTGGTCGAGCACGGGAAGGCCCTTCC GTTTCAGATCCCCGTTGAGCTTTTGTATATGTTCGCCGGCGGCATGGCTG GAGTGGTCGGGTGGGCTGCAGTGATGCCTATGGATACAGCCAAGTCGATC ATTCAGACATCAAGCAAGCCGGAGTCCTTGATGAAGACGATCATGAAAGT TCACAAGACAAAGGGCTGGCGATCGCTGTTTACAGGTTTGAATGCGGCGC TGGTCAGAGCGTTCCCTGCGAACGCGGCTCTGTTTTTGGGATATGAAGTT GCGCGGAGAAGCATGTGAAAAAGATCTACCAGTAGATATCTATAAGCCAA ATACAGTACAGTATAGTACACTGAGTTACAAGTCCATGTTGTATTTGCAT GGAGTTTTTAGATATGTTGACTCTTTTTCTGAGATTCGTGCATGTTTGTG GTAAGGAGGTCCACGTTCCCCTCATGAATTATCACGAGCTGCAAATGAAA CGTCAGTTGCTGCTGATGACTACGACTTCATCGACAGTTTTTTGGTGTGT TCAACGCGATGTTTGTGATGTCGCTTGGATTTCTGCCGATATTTGCGTAG ATCGACGCGGTGGCTACGGTGGACATCCCGAGCAAGTAGACTGAAATGGT TGCGGCCACTAAGGTTGAGAGGTGGTCGTCCCTCGGCAAATCTCTAGCAC TATTGGCTGTTGAAGTTGTCTCGTCCTCAGTACATTAGGCCCTCTGACTG TCACCGTGTCCACAGCTGCTGCCTGTGGGATGGCGTCGGTAAGCCATTTC TGTCGGAGTGCTATGCCTACGGCTTCTTCCAGCAGCGTACTAGAGACGGC TTTGAGGAAAGGAACTCAAGTTAGTCATATTCCACGCTAAACTAACTGCA AGTGTTTCATTAGTGTGTGTGACCAACTTCGGTCTATTCCAAGGACCCAA AGCTACGCATATATTTCATTGCACGCAACTTTTGTAACGGTTCCCACTAC CACGGTCTCACACTCGTGGCACCCGTGGGGGTTTCTGTCAATTCGTCGTA ATAGTCGAATCACTTGTGTGAAGTTAATGGCATGAGTCGTCTCAGGCCAG CTTTTTGGGAAATCTTTGTATGAGTCGACTATAACCTTTTTCATTTCTGG GAAATAGCCTTTACCCCCCTGGTTGGTTGTTGTCCGGGTGAAATGAGGGG GGTTTCAGAAAATTGCATGTTCCAAATGCAACAGAAAGTACAGTTAAAAG ACCCTGGTCGATAGGCAGGAACGGAAGTGGAATTAGGTGTGTATATTTGG CTATTTAGTGCAGCAGAAATCGGTGTCAATCCGCCGGCTGTTCTCGTATG AAAGAGTAAGGTTGAGGATGTGCCCTTTCACCATCTGCACTTTGTTTGGC TGGGGCGTAGTGGTGTTGTCAGCAGACAATAGTCACTGGGGAGGTCATGT ATATTCGTCTGTCAACCGTTGTTAGTGTTTTTTGTGTTTTGGTTCGTGAT ATTTACATGTCATGATATACCCATGTGTCGGAGGTTTTTGGGGGTGCAGC TGCTCATGAATGCGGAGTTGGATAACGTCTTGCCTGAAGTCTGCTTGTGT GCTTGTTCGGTTTGTTAACGTGCGATTTTTATTCCGCATGTTTTATTTTC AGCTGGCTCGCTTTGTTGTCCTTGCGTATATGCCGCCCGTGTCGTGCATG GCATGTGATGACATGGTAGCTACCTTAATCTGTTCCTGTAGGGTAACTAA CGTTGTGATGTAGCATATGAGAAGTGTTAATCTAACGTTACATGCCCCCT TCATCTATTTTCATTATTGAAGCTACAGCTCTGCGCTGAACTCCAGGGTG TGGTTCTTTCTGCCCGAAACCTGTGCACCTATCC
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Coding sequence (CDS) from alignment at H-paniculata_contig12786:3755..6488+

>mRNA_H-paniculata_contig12786.1747.1 ID=mRNA_H-paniculata_contig12786.1747.1|Name=mRNA_H-paniculata_contig12786.1747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig12786:3755..6488+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGTTAGTGGAGGACGTGGTTCATGTAGACCGGCAACCAAGCGATAG
CGCCTTTGCGCTGGCAACGAAAGATGTTGTCTCCAGCATATTCGGCTCGG
CGGCGTGCGTATACACCGGCCAACCGTTGGACACTATCAAAGTCCGTATG
CAAGCACGACCAGATGCCTTCAGCGGGGTGTGGCAGTGCCTGCGGAGAAC
CCTAGCCGAAGAACGCATAACAGCCCTCTGGAAGGGCTCTACTCCTGCGC
TGAGCGGCGCCGTCATGGAAAACATGGTCGCGTTCGGCGTAAACGAACAG
CTGAAGCGCCTATTTCCGGACGATACGCGCCCTAAGGGCGCTGCGCCGCC
ATGGTGGCAGTCCATTGTATTCGGCGGCGCAACCGGCCTATTCACCACCG
TTGTGCTTTGCCCCAACGACGTAATCAAGTGCAAGGTACAGGTTAGTCGG
TCTTTGAAAGCAGCTGAAGGGACAGTGGGCGGCGTTGAATCTTTGCGGTT
ACCGGCGCTCAACGCTAGTGAGATGATGAGGCACGTGCTGCGCACGCAGG
GAGTTCGAGGCTTGTTCGTGGGGCTGGGGGCACAGTTTGCGCGTGACGTG
CCGTTTTACGCGTCGTTTTTTGGCACGTATGACACGGTGGTCGAGCACGG
GAAGGCCCTTCCGTTTCAGATCCCCGTTGAGCTTTTGTATATGTTCGCCG
GCGGCATGGCTGGAGTGGTCGGGTGGGCTGCAGTGATGCCTATGGATACA
GCCAAGTCGATCATTCAGACATCAAGCAAGCCGGAGTCCTTGATGAAGAC
GATCATGAAAGTTCACAAGACAAAGGGCTGGCGATCGCTGTTTACAGGTT
TGAATGCGGCGCTGGTCAGAGCGTTCCCTGCGAACGCGGCTCTGTTTTTG
GGATATGAAGTTGCGCGGAGAAGCATGTGAATGGCGTTAGTGGAGGACGT
GGTTCATGTAGACCGGCAACCAAGCGATAGCGCCTTTGCGCTGGCAACGA
AAGATGTTGTCTCCAGCATATTCGGCTCGGCGGCGTGCGTATACACCGGC
CAACCGTTGGACACTATCAAAGTCCGTATGCAAGCACGACCAGATGCCTT
CAGCGGGGTGTGGCAGTGCCTGCGGAGAACCCTAGCCGAAGAACGCATAA
CAGCCCTCTGGAAGGGCTCTACTCCTGCGCTGAGCGGCGCCGTCATGGAA
AACATGGTCGCGTTCGGCGTAAACGAACAGCTGAAGCGCCTATTTCCGGA
CGATACGCGCCCTAAGGGCGCTGCGCCGCCATGGTGGCAGTCCATTGTAT
TCGGCGGCGCAACCGGCCTATTCACCACCGTTGTGCTTTGCCCCAACGAC
GTAATCAAGTGCAAGGTACAGGTTAGTCGGTCTTTGAAAGCAGCTGAAGG
GACAGTGGGCGGCGTTGAATCTTTGCGGTTACCGGCGCTCAACGCTAGTG
AGATGATGAGGCACGTGCTGCGCACGCAGGGAGTTCGAGGCTTGTTCGTG
GGGCTGGGGGCACAGTTTGCGCGTGACGTGCCGTTTTACGCGTCGTTTTT
TGGCACGTATGACACGGTGGTCGAGCACGGGAAGGCCCTTCCGTTTCAGA
TCCCCGTTGAGCTTTTGTATATGTTCGCCGGCGGCATGGCTGGAGTGGTC
GGGTGGGCTGCAGTGATGCCTATGGATACAGCCAAGTCGATCATTCAGAC
ATCAAGCAAGCCGGAGTCCTTGATGAAGACGATCATGAAAGTTCACAAGA
CAAAGGGCTGGCGATCGCTGTTTACAGGTTTGAATGCGGCGCTGGTCAGA
GCGTTCCCTGCGAACGCGGCTCTGTTTTTGGGATATGAAGTTGCGCGGAG
AAGCATGTGA
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