mRNA_H-paniculata_contig12786.1747.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: D8LEZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ5_ECTSI) HSP 1 Score: 438 bits (1126), Expect = 4.280e-144 Identity = 212/288 (73.61%), Postives = 246/288 (85.42%), Query Frame = 2 Query: 302 ATKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPESLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARRSM 1165 A KDV+SSIFGSAACVYTGQPLDTIKVRMQARPDAFSG +QCLRRTLAEE IT+LWKGSTPAL GAV+ENMVAFGVNEQLKR+FPD G++ PWWQ I+FGG TG+FTTVV+CP+DVIK KVQV RS++ E+ LP LNA+ M H+LRTQGVRGLFVGLGAQFARDVPFYA+FFGTY+TVV+ GKALP++I E+LY AGGMAGVVGWAAVMP+D+ KSIIQT+ KPESL++T+ V +TKGW++LF GLNAAL RAFPANAALFLGYE+ RR++ Sbjct: 14 AAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKD---GSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSANAEAKGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQTVVRTKGWQALFIGLNAALARAFPANAALFLGYEIVRRAL 298
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A836CAY2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY2_9STRA) HSP 1 Score: 266 bits (681), Expect = 7.550e-79 Identity = 144/286 (50.35%), Postives = 185/286 (64.69%), Query Frame = 2 Query: 311 DVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQ-TSSKPESLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARRSM 1165 + +SIFGS AC+YTGQPLDTIKVR+QA P+AFSG QCLR T+++E + +LWKG+TPALSGAV+EN+VAF +N++LK L+P R P + +G TG T V LCP DVIKC+VQV+R G + R P NA EM + ++RT+G+RG + GL AQ ARD F++ FFG YD +VE P E+ Y+ AGG+AGV GW MP D KS +Q T P SL + G R+LF G+ VRAFPANAALFLGYEVA+R++ Sbjct: 10 EAAASIFGSFACIYTGQPLDTIKVRIQATPEAFSGAMQCLRTTISQEGVASLWKGATPALSGAVVENIVAFAINKELKLLWPPSDRHAAVQP-----VAYGAVTGAVTAVALCPFDVIKCRVQVAR----------GTAARRAP--NAVEMAQLMVRTEGMRGFYRGLRAQVARDALFFSMFFGVYDVLVEQAMRRT-SFPREVAYIGAGGLAGVAGWLLSMPFDVLKSRMQVTPHGPRSLSAVARPLVAAGGPRALFAGVTVTCVRAFPANAALFLGYEVAKRNL 277
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A4D9CU68_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU68_9STRA) HSP 1 Score: 248 bits (632), Expect = 1.320e-71 Identity = 138/250 (55.20%), Postives = 171/250 (68.40%), Query Frame = 2 Query: 446 EERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPD---------DTRPKGAAPPWWQSIVF----GGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPESLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVAR 1156 EE + ALWKGS PAL GAV EN VAF VN+QLKR+ D + A +S+V GG TG+FT+ LCP+DVIKCKVQVSR++ T A++A EM+ HVL+TQGV+GLFVGLGAQFARD+PFYA FFGTY+ + KA +P E Y+ AGG+AGV GWAAVMP+D AKSIIQTS P+SL+ T+M V +T+G +L++GL A+ RAFPANAALFLGYE+AR Sbjct: 52 EEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRILADLEGYGLGNESNQESSKAEAKEESLVVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLKTGET----------AMDAQEMLVHVLKTQGVKGLFVGLGAQFARDIPFYAFFFGTYELSLVALKAYT-TMPQEGAYLVAGGLAGVAGWAAVMPIDMAKSIIQTSPNPKSLIPTMMDVAQTRGPMALYSGLGVAVFRAFPANAALFLGYELAR 290
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S2S5V7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V7_9STRA) HSP 1 Score: 233 bits (595), Expect = 2.770e-66 Identity = 125/290 (43.10%), Postives = 177/290 (61.03%), Query Frame = 2 Query: 308 KDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRP-KGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPESLMK---TIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARRSM 1165 KDV +S+ G+ AC YTGQP DT+KVR+QARPD ++G+ Q +T E + ALWKGS ++G +MEN AFGVNEQLKR+FP + G A +Q + G TG + LCP++++K + Q L+ A G L A + ++++ V R QG+ GL+ G+ AQ ARD FYA FFG+Y+ +V + +P E + +GG+AG++GW VMP+D KSIIQ + + +V +T+G LF+G ALVR+FPANAALFLGYE+ RR + Sbjct: 17 KDVAASVVGAVACCYTGQPFDTVKVRLQARPDEYTGMMQTFYKTAEAEGVAALWKGSVAVVTGMIMENAAAFGVNEQLKRVFPQSAQDLDGGAQGLFQPFMLGALTGSLVSFALCPSEIVKTRTQ----LEVANAKTSG-----LKAPTSMDILKKVWRLQGMAGLYTGIDAQIARDGLFYAVFFGSYEILVRAFRKHT-SLPDEANFFISGGLAGMLGWGFVMPVDVPKSIIQGDWRARPVGDFGGAFSEVFRTRGLSGLFSGSFPALVRSFPANAALFLGYELTRRGL 296
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S2URT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URT5_9STRA) HSP 1 Score: 224 bits (572), Expect = 4.040e-63 Identity = 122/291 (41.92%), Postives = 169/291 (58.08%), Query Frame = 2 Query: 305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGA--APPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARRS 1162 ++DV S+ GS C YTGQPLDTIKVRMQ P ++GV Q +T+ EE + ALWKG+ P G +EN VAFGVNE LKR FPDD K A P + + G TG + +VL P++VIK K QV +G +L++ ++++ +++ QGVR LF G AQ RD PFYA FFG Y+ + +P EL + +GG+AG+ GW MP D K+ +Q + S ++K+ + +G L++GL LVRAFPANAALFLG E+ +R+ Sbjct: 11 SRDVFSATLGSVCCCYTGQPLDTIKVRMQTNPHLYTGVIQTFSKTVGEEGVAALWKGAVPTAVGMALENAVAFGVNEALKRAFPDDPAAKNADERPDLLKPFLMGSITGCCSAIVLLPSEVIKAKTQVE---------IGS-------SLSSKDILQKMIKKQGVRSLFCGFDAQLMRDAPFYAVFFGGYELSCYLFRTHVPSMPEELNFFLSGGLAGMFGWTVAMPFDVPKTNVQARYDTKVFGSYFPEMIKIARERGVVGLYSGLGPTLVRAFPANAALFLGVEMGKRA 285
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S2L363_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L363_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.410e-59 Identity = 116/289 (40.14%), Postives = 167/289 (57.79%), Query Frame = 2 Query: 305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGAA-PPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159 T+D+ S+ GS AC YTGQP DT+KVRMQ P AF V + ++ E I ALWKG+ P G V EN +AFGVNE LKR FPD+ + P + + G TG + VL P++V+K K QV G G +++++ + +++ QG+R LF+G AQ RD+PFYA FFGTY+ + +P EL + +GG AG++GWAA MP D K+ +Q S + S ++++ + +G +L+TGL + RAFPANAALFLG E+ ++ Sbjct: 15 TRDIFSASIGSVACCYTGQPFDTVKVRMQTSPAAFPSVLFTSKSIVSNEGIPALWKGAVPTALGMVAENAMAFGVNEALKRTFPDEAKSDPTKRPDLMRPFLMGAITGCCSATVLLPSEVVKAKTQV------VVGNTGA---------SSADIYKKMMKRQGIRSLFIGFDAQIMRDMPFYAFFFGTYELNCYLFRTFVPSMPEELNFFLSGGFAGMLGWAAAMPFDVPKTNVQASWDSKVVGSYFPELIRIVRERGVLALYTGLIPTIARAFPANAALFLGVEMGKK 288
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: B8C9S7_THAPS (Mitochondrial carrier (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9S7_THAPS) HSP 1 Score: 214 bits (544), Expect = 2.020e-59 Identity = 117/288 (40.62%), Postives = 163/288 (56.60%), Query Frame = 2 Query: 305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159 T+D+ S+ GS AC YTGQP DT+KVRMQ P F V + L E + ALWKG+ P G V+EN +AFGVNE LKR FPD ++ P G TG + VL P++++K K QV VG V + +++E+ + ++R G+R LFVG AQ RD PFYA FFGTY+ + +P EL Y +GG AG++GW A MP D K+ +Q S + + S ++++ + +G +L+TGL + RAFPANAALFLG E ++ Sbjct: 3 TRDIFSASIGSVACCYTGQPFDTVKVRMQTNPSLFPSVAFTTKSILKNEGMGALWKGAVPTAMGMVLENAMAFGVNEALKRTFPDGSKEDPTQRP-----DLGAITGCCSATVLLPSEIVKAKTQV---------VVGNVSA------SSTEIYKKMIRQSGIRSLFVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWESKVVGSYFPELLRIVRERGVLALYTGLVPTIARAFPANAALFLGVETGKK 270
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S4T4E9_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4T4E9_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.900e-58 Identity = 122/311 (39.23%), Postives = 175/311 (56.27%), Query Frame = 2 Query: 254 DVVHVDRQPSDSAFALATKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPK----GAA--PPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159 DV+H P D ++D+ S+ GS C YTGQP DT+KVRMQ P+ +S +++ T+ EE I A WKG+ P G EN +AFGVNE LKR FPD + + GA P + + G TG + +VL P++V+K K QV A GT ++++++ + ++R QG + LF GL AQ RD PFYA FFG+Y+ + +P EL Y +GG+AG++GW A MP D K+ +Q+ + S ++++ K +G L+ GL LVRAFPANAALFLG E+ +R Sbjct: 3 DVLH----PRD-----VSRDIFSATVGSIFCCYTGQPFDTVKVRMQTNPELYSSIYKTATTTMGEEGIKAFWKGAVPTAMGMAAENAMAFGVNEALKRAFPDPNKDQFDHNGAQRRPDLLRPFLMGAITGCCSALVLLPSEVVKAKTQV------AVGT----------DVSSNDIFKKMVRKQGYKSLFCGLDAQLMRDGPFYAFFFGSYEMSCFLFRTYVPSMPEELNYFISGGLAGMLGWTAAMPFDVPKTNVQSRYDTQIVGSYFPQMIQITKERGILGLYNGLGPTLVRAFPANAALFLGVEMGKR 288
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S1ZAT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAT6_TRICV) HSP 1 Score: 212 bits (540), Expect = 6.060e-58 Identity = 115/291 (39.52%), Postives = 165/291 (56.70%), Query Frame = 2 Query: 305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDT---RPKGAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159 T+D+ S+ GS C YTGQP DT+KVRMQ PD + G++Q +++T A E + A WKG+ P G +EN +AFGVNE LKR FPD P + + G TG + VL P++V+K K QV GT G+ S +++ + +++ QG++ +F G AQ RD PFYA FFG+YD + K +P EL + +GG AG++GW A MP D K+ +Q+ + S ++K+ + +G L+ GL L RAFPANAALFLG E+ +R Sbjct: 64 TRDIFSATLGSVFCCYTGQPFDTVKVRMQTNPDIYGGIYQTIKKT-ASEGVPAFWKGAVPTAMGMALENAMAFGVNEALKRAFPDPNLGAMDPEKPPDLLRPFLMGTITGCCSACVLLPSEVVKAKTQV------LVGTGKGMSS--------NDVFKQMMKKQGIKSIFCGFEAQLMRDGPFYAFFFGSYDMLCYLFKIYVPSMPDELRFFMSGGFAGMLGWTAAMPFDVPKTNVQSRWDTKVVGSYFPELIKIGRERGILGLYNGLGPTLARAFPANAALFLGVEMGKR 339
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Match: A0A7S2NZN3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZN3_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.060e-56 Identity = 112/290 (38.62%), Postives = 163/290 (56.21%), Query Frame = 2 Query: 305 TKDVVSSIFGSAACVYTGQPLDTIKVRMQARPDAFSGVWQCLRRTLAEERITALWKGSTPALSGAVMENMVAFGVNEQLKRLFPDDTRPK--GAAPPWWQSIVFGGATGLFTTVVLCPNDVIKCKVQVSRSLKAAEGTVGGVESLRLPALNASEMMRHVLRTQGVRGLFVGLGAQFARDVPFYASFFGTYDTVVEHGKALPFQIPVELLYMFAGGMAGVVGWAAVMPMDTAKSIIQTSSKPE---SLMKTIMKVHKTKGWRSLFTGLNAALVRAFPANAALFLGYEVARR 1159 ++D+ S+ G+ C Y GQPLDT+KVRMQ P +SG+ + E TALWKG+ P G EN +AFGVNE LKR FP+D K P + G TG + +VL P++V+K K+QV A GTV +A ++M+ +L+ QG++ +F GL +Q ARD FYA FFG Y+ + +P EL + +GG+AG+ GWA MP D K+ +Q+ + S + + ++ + +G L+ GL L+RAFPANAALFLG E+ ++ Sbjct: 11 SRDIFSATIGAITCAYVGQPLDTVKVRMQTMPKVYSGIGTSFAHIVRNEGATALWKGAVPTTLGMTAENAMAFGVNEALKRAFPEDKSSKDVNGPPNMIRPFQMGAITGCCSALVLLPSEVVKAKIQV------AVGTV-----------SARDIMKQMLKEQGIKSMFCGLDSQLARDASFYAVFFGGYELSCYLFRTYVPSMPEELNFFISGGLAGMFGWACAMPFDVPKTNVQSRYDTKVVGSYLPEMGRIVRKRGILGLYDGLGPVLIRAFPANAALFLGVEMGKK 283 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12786.1747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12786.1747.1 >prot_H-paniculata_contig12786.1747.1 ID=prot_H-paniculata_contig12786.1747.1|Name=mRNA_H-paniculata_contig12786.1747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp MALVEDVVHVDRQPSDSAFALATKDVVSSIFGSAACVYTGQPLDTIKVRMback to top mRNA from alignment at H-paniculata_contig12786:3755..6488+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12786.1747.1 ID=mRNA_H-paniculata_contig12786.1747.1|Name=mRNA_H-paniculata_contig12786.1747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2734bp|location=Sequence derived from alignment at H-paniculata_contig12786:3755..6488+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12786:3755..6488+ >mRNA_H-paniculata_contig12786.1747.1 ID=mRNA_H-paniculata_contig12786.1747.1|Name=mRNA_H-paniculata_contig12786.1747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig12786:3755..6488+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |