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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1214 |
| Cds size | 891 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12780.1745.1 >prot_H-paniculata_contig12780.1745.1 ID=prot_H-paniculata_contig12780.1745.1|Name=mRNA_H-paniculata_contig12780.1745.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
METGNNSKNLEQVPATRISAHSDGPHPGRPPLPNHSKVAAKEYEPRGWGM
PPAIPSPNSRRLKISTGVGSNLNPAKTREKKQSVMRMPSATRRQSSIVVL
THGHGEPRKPMTKWKRGYVGFKREVKSSILVPLLLLLGVCGLATHVTGLA
GMSLGYFRWTVECEGVVSVVDEGRASGVQTYNIGWARYEGMGSSQSSELG
AALVANPTARGVSYVASQFDRRGIAGSSILEADWLSAVDRTSGAFGALTA
TGHFAGVAFNLVIVLLLLRLLLRTQFRQSKTCFVLMSKASGVHSGAG back to topmRNA from alignment at H-paniculata_contig12780:3014..5258- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12780.1745.1 ID=mRNA_H-paniculata_contig12780.1745.1|Name=mRNA_H-paniculata_contig12780.1745.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2245bp|location=Sequence derived from alignment at H-paniculata_contig12780:3014..5258- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGATGGCTGTATAGCCTTCCGACACATACCTTGTCCTGTAGTTCATGGTG
TATCGCATTTGAAAGATGTACATGTAATATACGCTCAATACCACTCCCCT
CAACAGGATTATGACGATAGACAAAGCAACAATGGGGTTATGAAACCGAA
AGGCTTGTGGATCCGAGTTGAACTCCTTCGAGCCGGCACCCGTGAGGGAC
TGACCCTTTGTCGCACAATAAAGAGTATACAGTGATAAGAGAGTATTAGT
ACCACAAAGGAGAGAAAAAACTTTCCTGGGGGAGTAAACATACATGGAGG
GGTAATCATAAAGATCGTGCGGGATGGAGACGGGCAACAATAGCAAGAAT
CTTGAACAAGTACCAGCAACACGGATATCCGCGCACAGCGATGGGCCTCA
TCCTGGGCGTCCACCCTTGCCTAATCATTCCAAGGTCGCTGCCAAAGAAT
ATGAGCCAAGGGGTTGGGGTATGCCCCCTGCAATTCCATCTCCCAATAGT
CGTCGATTGAAGATCAGCACGGGTGTTGGTAGCAACCTCAACCCTGCTAA
AACTCGAGAGAAGAAACAGTCAGTCATGCGCATGCCATCAGCGACACGGC
GGCAGTCGAGCATTGTGGTGTTGACCCATGGACATGGTGAGCCTCGAAAG
CCTATGACAAAGTGGAAAAGAGGCTACGTCGGATTCAAGCGGGAGGTGCG
TTCTTATCGATTAGGGGTGGAGCTGGCGCACTGCATGATAACGATCACTC
GATTCACCATGTTCAGCGTTGAAATCATGTACAAGTACTACCGAAATAGT
TATGTACCAATACAAGTATGAAGTGCGCAGAAGATTTAGGGGGGAAGGGG
CCTTTACTGATTTTGCCTTTCTCTTTTTGTCCTTTGTTTTCTCCTCGATA
TTCTCTGTTCCTTCAAAGTTTCCGAAGTTTTATAAATGTTTGGAATAAAA
AAAGTGTGAGTTTTGCATGCAGTGTGTATTCCTTATCGATAAAAAGAAAG
AATTTTATCGACGAGAAAGAAAAGAAATATCAGAATGGTACAGTTAGTAC
CAATCCGGAGACGGAGCTTGCTAGTGCTCGAGGTACGCAACCTCGACAGC
CGCAGATATATTTGCACCTTGATGTGCTTGGAGCACTTACGTATATACTA
TGTTTCCATTTTGACATTATTATGCCGATAATAATATAGGTATTGACGAG
TGCCCTGTGTCGTGTGCTGTCGATTGCCGCGCCCGAAAAGGATCCTTAAT
AGTAAAAATTCGGGGCTTCAGCATAGATTTCATTACCTCGCTTCGTCGAA
TGCTTTAACATGTTCGTTCCATAATTAAGTGCTCCCACTCGATGCCTGAA
GGTACTGCTCAATGGGCCTCGTCTACACACATTAACAGGTAAAATCCAGC
ATACTCGTGCCACTGTTGCTGTTGCTTGGTGTGTGCGGATTGGCGACGCA
CGTGACAGGGCTTGCGGGCATGTCACTAGGGTACTTCAGGTGGACCGTGG
AATGCGAAGGAGTTGTATCAGTCGTTGACGAAGGCAGGTAATCATATCAC
ATCTATATTTGCTAGAATACAACGATGATCCCTATCTCGATATATATCGT
CGCCGTTTCCTTGAGAAAGCGTTGCGCCAGAGAATTTATGCACACGTCCT
TTGGGCCAAGCCGTGTGGTTCCTTAACATTGATGATCTACTGCATATCTT
CTTTCTGACATGTCTTTCCTGAAGGTCCACACGCTTCGATTAGCGAAAAA
AGGCCGTCTACTTGACCGACGGCATTAAAATCCACGTGCTTTTCTGCGGC
GCCAACAATCAAGTCCATGCCGATAAGGAATTATAGCACCTTGCTGCACA
CATATTCTGCATTGGCAATCGACAGGGCGAGCGGGGTTCAAACGTACAAC
ATCGGATGGGCGAGGTACGAAGGAATGGGATCAAGCCAATCATCTGAATT
AGGCGCCGCACTTGTAGCCAACCCCACTGCACGCGGCGTCTCTTATGTTG
CTTCCCAATTCGACCGAAGAGGAATTGCGGGTTCGAGCATTCTCGAAGCT
GATTGGCTAAGCGCTGTGGACCGCACGAGCGGAGCTTTTGGTGCTCTAAC
GGCGACGGGCCATTTTGCTGGCGTAGCTTTCAACCTGGTCATTGTCTTGT
TGCTGCTACGATTGCTACTCAGGACGCAGTTCCGGCAAAGTAAAACGTGT
TTCGTTCTCATGTCCAAGGCGAGTGGTGTTCATAGCGGGGCGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig12780:3014..5258- >mRNA_H-paniculata_contig12780.1745.1 ID=mRNA_H-paniculata_contig12780.1745.1|Name=mRNA_H-paniculata_contig12780.1745.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1782bp|location=Sequence derived from alignment at H-paniculata_contig12780:3014..5258- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGACGGGCAACAATAGCAAGAATCTTGAACAAGTACCAGCAACACG
GATATCCGCGCACAGCGATGGGCCTCATCCTGGGCGTCCACCCTTGCCTA
ATCATTCCAAGGTCGCTGCCAAAGAATATGAGCCAAGGGGTTGGGGTATG
CCCCCTGCAATTCCATCTCCCAATAGTCGTCGATTGAAGATCAGCACGGG
TGTTGGTAGCAACCTCAACCCTGCTAAAACTCGAGAGAAGAAACAGTCAG
TCATGCGCATGCCATCAGCGACACGGCGGCAGTCGAGCATTGTGGTGTTG
ACCCATGGACATGGTGAGCCTCGAAAGCCTATGACAAAGTGGAAAAGAGG
CTACGTCGGATTCAAGCGGGAGATGGAGACGGGCAACAATAGCAAGAATC
TTGAACAAGTACCAGCAACACGGATATCCGCGCACAGCGATGGGCCTCAT
CCTGGGCGTCCACCCTTGCCTAATCATTCCAAGGTCGCTGCCAAAGAATA
TGAGCCAAGGGGTTGGGGTATGCCCCCTGCAATTCCATCTCCCAATAGTC
GTCGATTGAAGATCAGCACGGGTGTTGGTAGCAACCTCAACCCTGCTAAA
ACTCGAGAGAAGAAACAGTCAGTCATGCGCATGCCATCAGCGACACGGCG
GCAGTCGAGCATTGTGGTGTTGACCCATGGACATGGTGAGCCTCGAAAGC
CTATGACAAAGTGGAAAAGAGGCTACGTCGGATTCAAGCGGGAGGTAAAA
TCCAGCATACTCGTGCCACTGTTGCTGTTGCTTGGTGTGTGCGGATTGGC
GACGCACGTGACAGGGCTTGCGGGCATGTCACTAGGGTACTTCAGGTGGA
CCGTGGAATGCGAAGGAGTTGTATCAGTCGTTGACGAAGGCAGGTAAAAT
CCAGCATACTCGTGCCACTGTTGCTGTTGCTTGGTGTGTGCGGATTGGCG
ACGCACGTGACAGGGCTTGCGGGCATGTCACTAGGGTACTTCAGGTGGAC
CGTGGAATGCGAAGGAGTTGTATCAGTCGTTGACGAAGGCAGGGCGAGCG
GGGTTCAAACGTACAACATCGGATGGGCGAGGTACGAAGGAATGGGATCA
AGCCAATCATCTGAATTAGGCGCCGCACTTGTAGCCAACCCCACTGCACG
CGGCGTCTCTTATGTTGCTTCCCAATTCGACCGAAGAGGAATTGCGGGTT
CGAGCATTCTCGAAGCTGATTGGCTAAGCGCTGTGGACCGCACGAGCGGA
GCTTTTGGTGCTCTAACGGCGACGGGCCATTTTGCTGGCGTAGCTTTCAA
CCTGGTCATTGTCTTGTTGCTGCTACGATTGCTACTCAGGACGCAGTTCC
GGCAAAGTAAAACGTGTTTCGTTCTCATGTCCAAGGCGAGTGGTGTTCAT
AGCGGGGCGGGGGGCGAGCGGGGTTCAAACGTACAACATCGGATGGGCGA
GGTACGAAGGAATGGGATCAAGCCAATCATCTGAATTAGGCGCCGCACTT
GTAGCCAACCCCACTGCACGCGGCGTCTCTTATGTTGCTTCCCAATTCGA
CCGAAGAGGAATTGCGGGTTCGAGCATTCTCGAAGCTGATTGGCTAAGCG
CTGTGGACCGCACGAGCGGAGCTTTTGGTGCTCTAACGGCGACGGGCCAT
TTTGCTGGCGTAGCTTTCAACCTGGTCATTGTCTTGTTGCTGCTACGATT
GCTACTCAGGACGCAGTTCCGGCAAAGTAAAACGTGTTTCGTTCTCATGT
CCAAGGCGAGTGGTGTTCATAGCGGGGCGGGG back to top
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