mRNA_H-paniculata_contig12763.1735.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12763.1735.1
Unique NamemRNA_H-paniculata_contig12763.1735.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: D7FQ21_ECTSI (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ21_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 1.170e-94
Identity = 144/188 (76.60%), Postives = 173/188 (92.02%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKK-GENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKVGPDISKINRLTKERE 563
            C EAV+  LDGVSKV SGYAGGTM+NPTYRDVCSGR+GHAEVV++EYDP +VT  ELL++FWK+HDPTQGNRQGMD+GTEYRSI+LCEDEEQL +A AS+EA+Q KIN EA+LG+V+ +VTGKK GENIV+ITTT+DLL VFWEAEKVHQ+YYARNPLSPYC+MN+G+KLVK+ PDIS+INRL+++RE
Sbjct:   78 CIEAVFKTLDGVSKVVSGYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQGNRQGMDIGTEYRSIILCEDEEQLDMAVASREAKQAKINAEAVLGRVVGAVTGKKEGENIVNITTTIDLLQVFWEAEKVHQDYYARNPLSPYCIMNVGTKLVKLRPDISRINRLSRDRE 265
[Close]
BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: A0A4V3JXX2_9LEPT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Leptospira idonii TaxID=1193500 RepID=A0A4V3JXX2_9LEPT)

HSP 1 Score: 164 bits (415), Expect = 1.870e-43
Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKVG 521
            CTEAVYL++ GV  V SGYAGGT  NPTY+++C+G +GHAEV+ + YD +++   ++LD+FWK+HDPT  NRQG D+GT+YRS++   DE Q Q+A ASK        KEA  GK  A      G +IV   T +  LP ++ AE  HQNY+A NP +PYC   I  KL K+G
Sbjct:   14 CTEAVYLRIPGVLSVESGYAGGTTKNPTYQEICTGTTGHAEVIRIRYDSSLIGFSDILDVFWKAHDPTTLNRQGNDVGTQYRSVIFYHDENQKQIAEASK--------KEA--GKYFA------GRSIV---TEISPLPEYYPAENYHQNYFALNPGNPYCNYVIPPKLAKLG 167
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BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: A0A2V5VVI7_9BACT (Peptide methionine sulfoxide reductase MsrA n=4 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5VVI7_9BACT)

HSP 1 Score: 160 bits (404), Expect = 1.690e-41
Identity = 78/178 (43.82%), Postives = 115/178 (64.61%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKVGPDISK 536
            C EAV+ +LDGV  VTSGYAGGT +NPTY++VC+G +GHAEV+ +E+DP  ++ ++LL++FW++HDPT  NRQG D GT+YRS++L  ++ Q Q A  SKE  Q +  +                     I T +  L  F++AE+ HQ+Y+ +NP +PYC + I  KL K+ P ++K
Sbjct:   44 CLEAVFERLDGVKSVTSGYAGGTKENPTYKEVCTGATGHAEVIQIEFDPQKISYEKLLEVFWEAHDPTTMNRQGADAGTQYRSVILYHNDAQKQAAEKSKELAQWRFPR--------------------PIVTEIIPLTKFFKAEEYHQDYFRKNPNAPYCAVVISPKLEKLKPKLAK 201
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BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: A0A350EW33_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A350EW33_9BACT)

HSP 1 Score: 159 bits (401), Expect = 2.130e-41
Identity = 85/173 (49.13%), Postives = 104/173 (60.12%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKVG 521
            C EAV+ +L GV  VTSGYAGG  + P Y++VC G +GHAEVV + +DPA+ + + LLDIFW +HDPT  NRQG D GT+YRSI+L  DE Q   A AS+EA Q                 G   E IV   T +  L  FW AEK HQ+YY  NP  PYC+  I  KL K+G
Sbjct:   24 CVEAVFERLPGVKSVTSGYAGGKTEEPDYKEVCGGTTGHAEVVQIAFDPAVTSFERLLDIFWLAHDPTTLNRQGADEGTQYRSIILHHDERQRTAALASREAAQ-----------------GGLAEPIV---TEIVPLAKFWPAEKYHQDYYRNNPAQPYCLATIPPKLKKLG 176
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BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: A0A498G717_9EURY (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Halobellus sp. Atlit-38R TaxID=2282131 RepID=A0A498G717_9EURY)

HSP 1 Score: 158 bits (400), Expect = 2.670e-41
Identity = 81/172 (47.09%), Postives = 109/172 (63.37%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKV 518
            CTEA   +LDGV  VTSGYAGG  +NPTYR+VCSG +GHAEVV +EYDP ++   +LL++F+ +HDPTQ NRQG D+G++YRSIVL  D+EQ + A A  EA  E+ +                     D+ T ++ L  FW AE+ HQ+Y+ +NP   YC M+   K+ KV
Sbjct:   14 CTEAAMQELDGVESVTSGYAGGNTENPTYREVCSGSTGHAEVVQIEYDPDVIGYDDLLEVFFATHDPTQLNRQGPDVGSQYRSIVLYHDDEQRRQAEAYVEALDEEYDD--------------------DVVTEIESLERFWPAEEYHQDYFEKNPNDAYCRMHAQPKVEKV 165
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BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: A0A2V6FFJ1_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6FFJ1_9BACT)

HSP 1 Score: 158 bits (400), Expect = 2.840e-41
Identity = 80/178 (44.94%), Postives = 117/178 (65.73%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKVGPDISK 536
            C EAV+ +L+GV  VTSGYAGGT +NPTY++VC G +GHAEV+ +E+DP  ++ ++LL++FW++HDPT  NRQG D+GT+YRSI+L  +E Q + A  S++A Q K              TG+    IV +T        F++AE  HQ+Y+  +P +PYC + IG KL K+ P ++K
Sbjct:   19 CLEAVFERLEGVKSVTSGYAGGTKENPTYKEVCLGATGHAEVIQIEFDPQKISYEKLLEVFWQAHDPTTLNRQGADVGTQYRSIILYHNETQKKAAEESRQAAQWKS-------------TGRIVTEIVPLTK-------FYKAEDYHQDYFRNHPNAPYCAVVIGPKLEKLKPKLAK 176
[Close]
BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: U1NMB9_9EURY (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Haloquadratum sp. J07HQX50 TaxID=1238426 RepID=U1NMB9_9EURY)

HSP 1 Score: 157 bits (398), Expect = 4.470e-41
Identity = 82/177 (46.33%), Postives = 112/177 (63.28%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKVGPDIS 533
            CTEA   +LDGV  VTSGYAGG  DNPTYR+VCSG +GHAEVV V ++PA +T +++L +F+ +HDPTQ NRQG D+GT+YRSIVL   +EQ  VAR+                 V+ +V  +      ++ T +D L  FWEAE+ HQ+Y+ +NP   YC  ++  K+ KV  + S
Sbjct:   15 CTEAAMKELDGVRSVTSGYAGGETDNPTYREVCSGSTGHAEVVQVSFNPAEITYEDILRVFFSTHDPTQVNRQGPDVGTQYRSIVLYHSDEQAHVARS-----------------VMQAVASRYE---AELATELDSLTRFWEAEQHHQDYFEKNPRDAYCRAHVQPKVEKVQKEFS 171
[Close]
BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: A0A643JSG6_9EURY (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Haloferax TaxID=2251 RepID=A0A643JSG6_9EURY)

HSP 1 Score: 157 bits (396), Expect = 1.020e-40
Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKV 518
            C EA + +LDG+S VTSGYAGG+++NPTY  VCSG +GHAEV+ VEYDPA+V   ELL++F+  HDPTQ NRQG D+GT+YRSIVL  D++Q + A A  EA  E  +                     D+ T ++ L  F+EAE  HQ+Y+ +NP   YC  +   K+ KV
Sbjct:   16 CIEAAFKELDGISSVTSGYAGGSVENPTYEQVCSGNTGHAEVIQVEYDPAVVGYDELLEVFFAVHDPTQLNRQGPDVGTQYRSIVLYHDDDQQRQAAAYIEALDESYDD--------------------DVVTELEPLETFYEAETYHQDYFEKNPNDAYCRFHASPKIEKV 167
[Close]
BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: A0A2W4QVE1_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2W4QVE1_9BACT)

HSP 1 Score: 158 bits (400), Expect = 1.030e-40
Identity = 82/189 (43.39%), Postives = 118/189 (62.43%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKVGPDISKINRLTKEREKQ 569
            CTEA++L + GV KV SGY+GGT++NPTY+ VC+G +GHAEVV + YDP+++T  ELL+IFW +HDPT  NRQG D+GT+YRS++   +EEQ ++A   K+    ++N+E + GK               + T +     F+ AE  HQNYYA N  +PYC   I  K+ K     +  N+L  E++ Q
Sbjct:   52 CTEAIFLDVKGVLKVQSGYSGGTVENPTYKQVCTGTTGHAEVVQITYDPSVITYDELLEIFWHTHDPTTLNRQGNDVGTQYRSVIFYHNEEQRKLAEHYKQ----RLNEENVFGK--------------PVVTEISPFKAFYVAEDYHQNYYALNSNAPYCTFVIQPKVEKFRKVFA--NKLKTEKQTQ 220
[Close]
BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Match: A0A7D5E5N5_9EURY (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Halarchaeum TaxID=744724 RepID=A0A7D5E5N5_9EURY)

HSP 1 Score: 156 bits (395), Expect = 1.360e-40
Identity = 82/172 (47.67%), Postives = 109/172 (63.37%), Query Frame = 3 
Query:    3 CTEAVYLKLDGVSKVTSGYAGGTMDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQGMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGKKGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKV 518
            C EA + +L+GV KVTSGYAGG  ++PTY +VCSG +GHAEVV +EYDPA+V+  ELL++F+  HDPTQ NRQG D+GT+YRSIVL  D+EQ + A A  +A  E+ +                     D+ T V+ L  F  AE+ HQNY+ +NP   YC M+   K+ KV
Sbjct:   16 CIEAAFEELEGVEKVTSGYAGGHAEDPTYEEVCSGETGHAEVVQLEYDPAVVSYDELLEVFFTIHDPTQLNRQGPDVGTQYRSIVLYHDDEQREQAEAYVDALDEEYDD--------------------DVVTEVEALETFHRAEEHHQNYFEKNPDDAYCTMHAQPKVEKV 167
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12763.1735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ21_ECTSI1.170e-9476.60Peptide-methionine (S)-S-oxide reductase n=1 Tax=E... [more]
A0A4V3JXX2_9LEPT1.870e-4349.71Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V5VVI7_9BACT1.690e-4143.82Peptide methionine sulfoxide reductase MsrA n=4 Ta... [more]
A0A350EW33_9BACT2.130e-4149.13Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A498G717_9EURY2.670e-4147.09Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V6FFJ1_9BACT2.840e-4144.94Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
U1NMB9_9EURY4.470e-4146.33Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A643JSG6_9EURY1.020e-4047.09Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A2W4QVE1_9BACT1.030e-4043.39Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A7D5E5N5_9EURY1.360e-4047.67Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12763contigH-paniculata_contig12763:1907..7498 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score132.1
Seed ortholog evalue2.4e-28
Seed eggNOG ortholog136993.KB900626_gene3626
Preferred namemsrA
KEGG koko:K07304
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Peptide methionine sulfoxide reductase
EggNOG OGs1MVUS@1224,2TSAM@28211,36Y2B@31993,COG0225@1,COG0225@2
Ec32 ortholog descriptionmethionine sulfoxide reductase
Ec32 orthologEc-01_007800.1
EC1.8.4.11
COG Functional cat.O
Best tax levelMethylocystaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons5
Model size2209
Cds size513
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928997.7780588-UTR-H-paniculata_contig12763:1906..19771622928997.7780588-UTR-H-paniculata_contig12763:1906..1977Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12763 1907..1977 +
1691480695.8805795-UTR-H-paniculata_contig12763:1906..19771691480695.8805795-UTR-H-paniculata_contig12763:1906..1977Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12763 1907..1977 +
1622928997.8706152-UTR-H-paniculata_contig12763:5873..74981622928997.8706152-UTR-H-paniculata_contig12763:5873..7498Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12763 5874..7498 +
1691480695.9389098-UTR-H-paniculata_contig12763:5873..74981691480695.9389098-UTR-H-paniculata_contig12763:5873..7498Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12763 5874..7498 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928997.7902262-CDS-H-paniculata_contig12763:1977..19981622928997.7902262-CDS-H-paniculata_contig12763:1977..1998Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 1978..1998 +
1691480695.8971205-CDS-H-paniculata_contig12763:1977..19981691480695.8971205-CDS-H-paniculata_contig12763:1977..1998Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 1978..1998 +
1622928997.8067868-CDS-H-paniculata_contig12763:2479..25961622928997.8067868-CDS-H-paniculata_contig12763:2479..2596Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 2480..2596 +
1691480695.9052079-CDS-H-paniculata_contig12763:2479..25961691480695.9052079-CDS-H-paniculata_contig12763:2479..2596Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 2480..2596 +
1622928997.8249593-CDS-H-paniculata_contig12763:2872..29771622928997.8249593-CDS-H-paniculata_contig12763:2872..2977Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 2873..2977 +
1691480695.9130278-CDS-H-paniculata_contig12763:2872..29771691480695.9130278-CDS-H-paniculata_contig12763:2872..2977Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 2873..2977 +
1622928997.840437-CDS-H-paniculata_contig12763:3792..39181622928997.840437-CDS-H-paniculata_contig12763:3792..3918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 3793..3918 +
1691480695.9225268-CDS-H-paniculata_contig12763:3792..39181691480695.9225268-CDS-H-paniculata_contig12763:3792..3918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 3793..3918 +
1622928997.8566105-CDS-H-paniculata_contig12763:5729..58731622928997.8566105-CDS-H-paniculata_contig12763:5729..5873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 5730..5873 +
1691480695.9304233-CDS-H-paniculata_contig12763:5729..58731691480695.9304233-CDS-H-paniculata_contig12763:5729..5873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12763 5730..5873 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12763.1735.1prot_H-paniculata_contig12763.1735.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12763 1978..5873 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12763.1735.1

>prot_H-paniculata_contig12763.1735.1 ID=prot_H-paniculata_contig12763.1735.1|Name=mRNA_H-paniculata_contig12763.1735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MDNPTYRDVCSGRSGHAEVVMVEYDPAIVTTQELLDIFWKSHDPTQGNRQ
GMDMGTEYRSIVLCEDEEQLQVARASKEAQQEKINKEALLGKVLASVTGK
KGENIVDITTTVDLLPVFWEAEKVHQNYYARNPLSPYCVMNIGSKLVKVG
PDISKINRLTKEREKQSSAT*
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mRNA from alignment at H-paniculata_contig12763:1907..7498+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12763.1735.1 ID=mRNA_H-paniculata_contig12763.1735.1|Name=mRNA_H-paniculata_contig12763.1735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5592bp|location=Sequence derived from alignment at H-paniculata_contig12763:1907..7498+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGTACCGAGGCCGTATACCTTAAGCTTGACGGCGTGTCCAAAGTCACC
TCGGGGTACGCCGGAGGCACGATGGATAATCCTACGTACAGAGTGAGTCC
ATCACGACAAGTCTTGTTAGCTTGGCTCTACAATACTTGTAGCGAGTGTA
TGTACATGCACATGGTAGAATTAACCGGCGATACTCGAGATTGGGGATTC
ACCTTCTCGTTGGGATTAAAGTTTCGTTGAATTAGAATGGAATACTTGGA
AAGTGGTGCCAGCGAAAGGCTCTTTCCGTGCGAATCGAGCTACGAAAAGG
TTTCCAAATTTATTGTGCAGGGTAAATAGTAGTGAGACGGACACGAACTC
TCCCCGGAAAGTGACTTTAGCCAGCACCATTTTCCAAGCATTCAATTCAA
ATTCAACGAAACTTCAATCCCAACAAGAAAGTTGATCCCCAATCCCGAGT
ATCGCCTGTTGATTACTGTATGGCAGTTCTCGTGTTTCAGGCATCTCTTC
GTGATGTTTTTTATTGATGGGCTTTTTTCCGCGTGTTTTTCCCCCTGCTC
GCGTGGGCGATTCGTCTGAGCAGGACGTTTGCTCAGGGAGGTCAGGGCAC
GCTGAGGTAGTGATGGTTGAATACGATCCTGCCATTGTTACAACGCAGGA
GCTTCTCGACATCTTCTGGAAGAGTCACGATCCCACGCAGGTCAGTTCCC
AGACTAAGTACCAGCAGTCTATCATGAATCATGTTATCCTTGTGTAGCAG
CACTTGCTGCTACCACAGGCTAGCTGGCCGCCGCATCATCATCAATATTT
TAAGTTGTGCACATTTTTAGTTTTCTGTCTCTGTCAAAGGATAGTGTGAT
TGAGTCCCGCGAGTTATCGCAACGAACTCGAGAAGGGGTCGGATCTCACC
ATGGTGGTATTGCGCTTCGGTTTGAACAATATTACGATATTTACCGTCTC
ATGTCGTGGGCCCCAGGGAAATCGACAGGGGATGGACATGGGCACGGAGT
ACCGAAGTATTGTCCTGTGCGAGGATGAGGAGCAACTGCAGGTGGCCAGG
GCCTCCAAGGAGGCGCAGCAGGTAAAGTAATATACTCCCCCACCTCTTTT
TGGCATGGGATAACGGTATGTAACTACGGCAGATTATTATTAGGGCTTTT
TATATGACCGGCCGTGCACATACATGCTTTTCACACATGACTAGACCCGA
AACAATTTGCGGTAGCGTTTAAAAATATATATACTATTCATACGTTCCAT
ATCTGAATCGACGTCGGCTCCGTCTATTTTTCCAACCTGTCGGCAATCGA
AATCTGTGAGGTTCCGGTCATATGAAAAGAGCCTTAATTTTAATCAACCC
TTTTAGAGCCGTTTTCCGATGCATTCCCTACTGCAGTCCCTGTCTAATCC
CCACACCTCAAGAATAGGAGAGAACAATCCAGATGGCATCCTTGCGGTGC
TAGGGAGCTGTCGCTGTTCAATCAAAATGTTGAATACACAGTGCGTACAA
CAAAGCAAGGTAGCTGGCCATTGTCTGCCCACGACGACTGCAGCGCTCGA
CGTTTGTTGTCAGATGCGTTTTTTGTTTTCCGCAACAGCCTCCCAGCGCC
AAACGGGTTAAAACTGCAAACGTTGTGCTTCCATGCTCGTGCAGTCATGC
GTTTGGTAGATACAAAATTAGAAGGTTCCCACAATCTTCCTGTTGGTCGA
AATGGTTGAAAGCAGCGATCTGATTGATCCCAAACTCTTGGTTGCCATAT
GACGTCGTTTATCCCACACGGACGCGAAATCGGGCGTACGGTACGGTACT
GTATGTAATATGACCAACGAGACACTCCATGCCCTGCAACCGCCAAGCTC
ACGCCCCTTGTTTGTTGTATCCGTGGGTATGGCCAGGAGAAGATCAACAA
GGAAGCTCTGCTGGGGAAGGTACTCGCTTCGGTGACGGGAAAGAAAGGGG
AAAACATAGTTGACATAACCACTACCGTGGATTTGCTGCCAGTATTCTGG
GAGGCGGAGAAGGTGAGACAGCGGTAGTGTGTACAGGCGACGGGCAAGTA
TAATTGCGAGCTGCACTAAGCTTTCTGTTTTAGTTGGAAGGGATATGAGA
GAGAGCGGCGGCTGATAGACGGAACGGGGCAAACGCCAATCGCTGCCCAT
ACTTCGATGTTTTCTTGTTGCAGAAGGTTATATATATATATATATATATA
TATACATATGCTGAATATATCAATTGTTGCGATTGTCATTTTCCCGAGAG
CGCTCCGGTTTGTTCGGTCTTTTTGGTCAATCATAGAGTCGTGTTTTAGC
CGATGCCACTGTCGGAGCGGGTATTTTTTCTCCGTGTCTACCGCTTCCGC
TCGGACCTTGATTACTTCCAGCCGTCACCGCGCGTTGTTCCCTGTGATGG
AGACCTTCGGCGCGCGGAACCAAAACCAAATCCGTTCGTCCGCTTCTATC
ATCATCCGCGTCCGCATTTCTATGCGCCTCCTCTATACCTACTGTCACTT
TTTTCTGGAGGGGCGACCGTTGATGATAGAATGAGCGTCGTTTCGCGGAG
CGTGTTTTTGGGCGACCGCGCTTGCTCGGAGCCTCCAGTGCTGGCGGACT
GTGCTGTAATGTGGCGCTGACCGTGTCCTCTGTCGCACCATCTCAAACGT
CTGGACTGTTTGCCTTGTTATCACAAAAGTCATCTATCGTGGCCCATTTT
CTCCATACGTTGTGCAGTGGATACCTTGCTGCTCGTGTGCTCGTGTTCTG
CTGTGGATTCAACATGTAAAGAATCGCTGACATGACGTCACATTTTTGTG
AGGTTGGACATCAACAGGTTGCGGCGTCAGCGGTAGAAACCTTTGCACAC
ACGTCATTTTGCCTCGTTATCTCATCATCAACATCGCGATTGAATAGGTT
GTCATTTTTCCTTGGTCTTGGCTGCCGCTCATTGAGACCTGCCGCGAGTG
ACGGAAAGCTTATCGTTGCTTCGCTATCTGGCGTGTTTTCCGGGGCCAGT
TGCTGGTACAGAGTTATAGATAGTTGTCCAGTGAGCCGTCAGAGCAGAAT
CTTCGCTACTCATTTTCGACATGCATCTGTTCGTTTTTGTTGGTCTCTAC
AACAACAGTGGTACATTTAGACAGTAGTACAGTGTTTCCCGCCCTCGTCC
ACCCTACTGCATTCAATGGGGCACGCACCGTTCGTTCTTCTTGGATGTTG
CTCATTGATCGTTGCTCAGTGATCGTTGCCACATTAGCGCCATAAACCTT
GTATATATACAAGTATGTGTCTACAACCCATGCGTTCGCTACGCTATTCA
GCCTAGGCGACGAGCTAGTTACCACTACCAGGTATCAGCCAACACGACAA
CCGTTATACGCGCTGAATGTGCCTCCGCCGCTGGACAGATCTACTGGTGT
AAGCCGCGGCAGCCCCTTTTAAGAGACTCCGTGATCTGTGTGTGGAGCAT
GAGGCCTGCCCAACTCGCAAGCAAATGACGACAACGAAGCGCTAAATTAC
CCAGTTGTGAATGCGACACTTGCAGTGAGGCGTGGATGATTCTGTGCGCG
ATTCTAATTTTGCGGGAACGCGGATCTAGCTTAATTTTCATGACCAAAAA
GTATTGAAGTAGAACGATGCAACTGTCCGGGATCGCAAATCGCGTGCGAA
GAATCCGAAGGCAGTATTTTGGGGCATTGTGATGTGAGTGCCCTACATGT
AGGAAGGCGGTTCGCTTTGCATCAGGATGTATGCGCATGGTACTGTAACA
CCTGGCAGTTGTTCTGAGGTGCACATGACTCGCTTGCCTTTCTCCTCATA
TTTCCGCCCGTGTGTCTTATCAGGTCCATCAAAACTACTACGCGAGGAAC
CCGTTGTCGCCGTACTGCGTGATGAACATTGGAAGCAAGTTGGTCAAGGT
TGGACCGGACATCAGCAAGATTAACCGGTTGACGAAGGAGCGAGAAAAGC
AAAGCTCAGCTACATGATGCCGCCGAAAGTAGGGGGAAATTTTACAAACA
GGTCGTAGTGCCCGGCAGCCGCGGTTGAGCTTTACTGCTTGTTTTTTTTT
CGTCGTCACTCAAAAGTATTATTTGTGTTGCCGAACCAGTACAATAATCC
AGTACGGAGAGTAGAGGATAGAGAAAGAGGCACAAACATGTATCATGTTG
CAGGTTTTCTTCCCCGTGAAGCTTGCTTGGTGAACAATCTACTATACATG
GCTGGCTCCCTTCAGACTTGAGTTGGTGCTGCGGTTTTCTGTCTTCATGA
GGTCTCACTGAACCCTCACAAGATCTCAGTCATGAAGGTTGCTAGCCGAC
ACTGGCAAAGTTGACGACGTAAGTGCAGTATAGGATAAACGGCCGCGACG
GTATCGCAGTACCGTCGGTGAGATGAAGTCAGATGTATAGAGCTCGGTGT
GGTCGTTATCCTGTTGTATAGCTCAGTAGATCCGATCTCCTTTTGTGCGA
ACAGAATGAGAGTAAATAGATACTGCCTAAAGCTATTTGTATGCAACGAC
GATTCTGATGAGGTACAATGCAATATTTGGTGTTGGCTGCGATACATACG
GGATGCAGGAAACCGCTTAATATACATAAAATAGGCCTTACAAAAGGGAT
CTAGTCCCAAGGCACTCTAGTACGACGGTTGTTATGAAATAATACATTTG
TTGATAGTAACGCTGGCGTAAAGGAACAGTCATATAACGTTGATCGCACA
ACATTCCGACTGCTCCGTGAAGTCAAGCAGTGTCAGGCCAAGCCAATACA
TGCTGGGGACCACACAGGAAGTCATGGTGCTGTTCCTTTGTATTTCCTCT
TGTATTCTTGGCGACTTCGAATCTGAAGCAGGAGGACGCCATGTTGTCTT
CAATGGTACGGCATATAATGCTCTCAAAGAGACGCCGCTATTTTGTACTT
TTTTGTGTAAACCCTTTCTATGTGCAAGCATGCTACCCACGGTTTTGTGA
AATAGAACGTGCCTCAAGGCGAGCCTTACTGGCTTTACTGTTGCCATAGA
TTAATTATTTGGTGGCACGGGGCATCAGTATGTTGATTTGTACAATGTCA
AGATAGGCGAATAAAACGATCCGAAGTCAAGATGTATTTGTCACGATGAA
CGAACGTAATGTTACGAGTGTGCAGCGAATGGCTCTCTGACTGATCTCCG
CAATTCGAACGACAGCGATCAACATGCGATGGACACAGTTTCTCTACCCG
CATTTTGCCGGAAAAAAATCCCGTCATTTGAGAACACGGTGCTTCCGGGA
GAGACTGGCTCTCGAGGGGACACCGCCTGCTCTCTGCGGGTCGGTTCTAG
GTCTTGGGATGTAGTGCGGAGCAAGCTCTTGGATTTTATTCTGTCGTCGA
TGGAGTGACCATCTAGGGTCGGACACAGCTAGAGGGCTGCTCCGAGAAAG
GGACAAAATACCATTGGTCGTTGTGTAGGGGTCCGGGGTTTAGGAACTCC
AAGGACGTCCACGGACCTACGCCCGAACGGGTAGGGTAGCTCGTGAAATG
AGCATGACTGGAAGTCTAGTCAGAGGTCTTTTAGTGGGTGCAACCCCCAC
ACTGCCTACTTGGTTCGGCCGAACCGGGGTGGTGCCTACCCC
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Coding sequence (CDS) from alignment at H-paniculata_contig12763:1907..7498+

>mRNA_H-paniculata_contig12763.1735.1 ID=mRNA_H-paniculata_contig12763.1735.1|Name=mRNA_H-paniculata_contig12763.1735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at H-paniculata_contig12763:1907..7498+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATAATCCTACGTACAGAATGGATAATCCTACGTACAGAGACGTTTG
CTCAGGGAGGTCAGGGCACGCTGAGGTAGTGATGGTTGAATACGATCCTG
CCATTGTTACAACGCAGGAGCTTCTCGACATCTTCTGGAAGAGTCACGAT
CCCACGCAGGACGTTTGCTCAGGGAGGTCAGGGCACGCTGAGGTAGTGAT
GGTTGAATACGATCCTGCCATTGTTACAACGCAGGAGCTTCTCGACATCT
TCTGGAAGAGTCACGATCCCACGCAGGGAAATCGACAGGGGATGGACATG
GGCACGGAGTACCGAAGTATTGTCCTGTGCGAGGATGAGGAGCAACTGCA
GGTGGCCAGGGCCTCCAAGGAGGCGCAGCAGGGAAATCGACAGGGGATGG
ACATGGGCACGGAGTACCGAAGTATTGTCCTGTGCGAGGATGAGGAGCAA
CTGCAGGTGGCCAGGGCCTCCAAGGAGGCGCAGCAGGAGAAGATCAACAA
GGAAGCTCTGCTGGGGAAGGTACTCGCTTCGGTGACGGGAAAGAAAGGGG
AAAACATAGTTGACATAACCACTACCGTGGATTTGCTGCCAGTATTCTGG
GAGGCGGAGAAGGAGAAGATCAACAAGGAAGCTCTGCTGGGGAAGGTACT
CGCTTCGGTGACGGGAAAGAAAGGGGAAAACATAGTTGACATAACCACTA
CCGTGGATTTGCTGCCAGTATTCTGGGAGGCGGAGAAGGTCCATCAAAAC
TACTACGCGAGGAACCCGTTGTCGCCGTACTGCGTGATGAACATTGGAAG
CAAGTTGGTCAAGGTTGGACCGGACATCAGCAAGATTAACCGGTTGACGA
AGGAGCGAGAAAAGCAAAGCTCAGCTACATGAGTCCATCAAAACTACTAC
GCGAGGAACCCGTTGTCGCCGTACTGCGTGATGAACATTGGAAGCAAGTT
GGTCAAGGTTGGACCGGACATCAGCAAGATTAACCGGTTGACGAAGGAGC
GAGAAAAGCAAAGCTCAGCTACATGA
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