mRNA_H-paniculata_contig12746.1728.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: D7FL25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL25_ECTSI) HSP 1 Score: 229 bits (583), Expect = 7.000e-70 Identity = 112/165 (67.88%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 13 SLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKLRRGAPQATGFAGWFDVSFRGRDGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNVK 507
SL W++FSE AM +Y +DMSGLD+AY+ EC F+LSS WREL QV++ P+ VKELDLHTC+L++TKGL+ FSF LR GAP TGFAGWFDVSFRGRDGV+PL PVEFST+P GYTHWGQQVFYLQE V A A + EG VSMVRQA NPRLYNVK
Sbjct: 328 SLSGWSTFSEHAMQRYGVDMSGLDKAYEEECAGVFSLSSLWRELAGHQVVSEPVTVKELDLHTCSLEDTKGLAKTLFSFPLRDGAPPVTGFAGWFDVSFRGRDGVAPLQRPVEFSTAPAAGYTHWGQQVFYLQEPVVAAEDATV--EGTVSMVRQANNPRLYNVK 490
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: A0A6H5K1X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X3_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.270e-68 Identity = 110/166 (66.27%), Postives = 128/166 (77.11%), Query Frame = 1
Query: 13 SLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKLRRGAPQATGFAGWFDVSFRGRDGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNVKA 510
SL W++FSE AM +Y +DMSGLD+AY+ EC F+LSS WREL QV+++P+ VK LDLHTC+L++T+GL FSF LR GAP TGFAGWFDVSFRGRD V+PL PVEFST+P GYTHWGQQVFYLQE V A A +EG VSMVRQA NPRLYNVKA
Sbjct: 274 SLSGWSTFSEHAMQRYGVDMSGLDKAYEEECAGVFSLSSLWRELAGHQVVSDPVTVKALDLHTCSLEDTRGLENTLFSFPLRNGAPPVTGFAGWFDVSFRGRDEVAPLQRPVEFSTAPAAGYTHWGQQVFYLQEPVVAAEDAT--IEGTVSMVRQANNPRLYNVKA 437
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: W7TTE4_9STRA (Ribosomal L11 methyltransferase, PrmA n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE4_9STRA) HSP 1 Score: 140 bits (354), Expect = 6.420e-37 Identity = 74/169 (43.79%), Postives = 99/169 (58.58%), Query Frame = 1
Query: 16 LESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKL----RRGAPQATGFAGWFDVSFRGR-DGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNVK 507
LE W +FS Q Y LDM+GL Y+ E EY+ LSS+W EL QV+ P+V++ LDL +CT +E KG+ PF F + +GFAGWF F G G+ PL P ST+P GYTHWGQQVF++ + G ++EG V++VRQ N RLY+V+
Sbjct: 225 LEDWQTFSHQTKEFYDLDMAGLTAQYEEEQKEYYLLSSSWAELRAEQVVAEPVVIRRLDLKSCTFEEIKGVPETPFQFVIPPNDNNEPVYVSGFAGWFTTDFFGNAPGIEPLPHPTTLSTAPDVGYTHWGQQVFHVVVGLELFPGD--VVEGTVTLVRQVENARLYHVE 391
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: A0A482SBI8_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBI8_9ARCH) HSP 1 Score: 135 bits (341), Expect = 2.460e-35 Identity = 72/165 (43.64%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 10 SSLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKLRRGAPQATGFAGWFDVSFRGRDGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNV 504
SS+ W FSE+ Y +D+ L + E EY+ S W EL V+ P+++K+LDL+TCTL + +G+ VP+ ++ A +GFAGWF V F G SP++ V ST P G THWGQQVFYL+EAV G L G+V+MVRQ +N RLYN+
Sbjct: 193 SSMRDWKVFSEEMKHYYNVDVGALTNTFHKEQEEYYVYSGLWTELKTEHVVGQPVIIKKLDLNTCTLKDAEGVDTVPYDIEIPFNAT-VSGFAGWFTVDFNGSV-PSPVNKRVVLSTGPEAGNTHWGQQVFYLKEAVDCTPGTH--LHGKVAMVRQEKNKRLYNL 353
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: A0A6U3STS5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3STS5_9STRA) HSP 1 Score: 133 bits (334), Expect = 6.620e-34 Identity = 71/178 (39.89%), Postives = 96/178 (53.93%), Query Frame = 1
Query: 13 SLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGL------SAVPFSFKLRRGAPQATGFAGWFDVSFRGRD-----GVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNVKAR 513
S+ W+ F++ + Y +DMS L+ +++ E EY++LSS W EL V++ P +VK LD+ TCTL+E+KG+ S F K +GFAGWF F+ R G L P ST P GYTHWGQQ FYL ++P G LEG + M R N RLYN + R
Sbjct: 220 SMSDWSEFADTTKTVYGVDMSVLERSFEREQREYYSLSSRWSELEPAAVLSEPKIVKVLDMTTCTLEESKGIFAGDPYSTFDFDVKGDEVVGPISGFAGWFTADFKSRTDEAGIGAPKLPSPAFLSTGPNDGYTHWGQQTFYLLSSIPLLKGETTRLEGSIEMSRSKDNARLYNCRIR 397
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: B8LEA9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEA9_THAPS) HSP 1 Score: 126 bits (317), Expect = 7.110e-33 Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 16 LESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKLRRGAPQATGFAGWFDVSFR------GRDGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNVKAR 513
+E W F+E + Y +DMS L++ +D E EY+ LSS W EL ++ P VVKE D+H CT+++ +G+ K GAP GFAGWF V F+ G+D + P ST P GYTHWGQQVF+L A+P + + G + M+R + RLYN + R
Sbjct: 58 MEDWKEFAETTSNMYGVDMSILEKDFDREQKEYYVLSSRWAELGTGCLLAEPCVVKEFDMHVCTVEDARGVGLEVGEDK-GSGAP---GFAGWFTVDFKSRTDDIGKDVAPQIPNPAYLSTGPEMGYTHWGQQVFHLPSAIPLLADQSTRINGTMEMMRTKESARLYNTRFR 225
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: A0A812S7V0_SYMMI (PRMT10 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7V0_SYMMI) HSP 1 Score: 127 bits (319), Expect = 1.890e-32 Identity = 68/165 (41.21%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 13 SLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKLRRGAPQATGFAGWFDVSFRGRDGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNVK 507
S+ W F ++ Y +DM+ L+ + E +Y+ SS W EL++ VI P+VVK LDL+TC L++ G++ + F + +A+GFAGWF V F G +P V ST P GYTHWGQQVFY +EAV G ++ G +S+VRQ +N RLYN++
Sbjct: 152 SMHEWHMFKQEMQEFYQVDMNILEPKFTKEQEDYYIYSSLWTELSQEHVIGQPVVVKRLDLNTCALEDALGVAPTEYRFDVPYPV-RASGFAGWFTVDFAGSV-ENPAEKRVTLSTGPEMGYTHWGQQVFYWKEAVNCVPGT--VISGTMSLVRQEKNKRLYNME 312
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: A0A835YPE5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPE5_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.660e-32 Identity = 67/164 (40.85%), Postives = 93/164 (56.71%), Query Frame = 1
Query: 13 SLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKLRRGAPQATGFAGWFDVSFRGRDGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNV 504
S + W F + Y DM+ L+ Y+ E Y+ LSS W EL Q + ++K D+HTCTL++ +G+ PF + + +GFAGWF FRG + +PL VPV ST+P GYTHWGQQVFYL+ VP +EG +++ RQ N RLY+V
Sbjct: 180 STQEWHRFKREMRQYYDCDMNVLEGVYEEEQKGYYILSSFWAELQPDQCVGQGAMIKHFDMHTCTLEDVQGVEETPFRINVEHDC-RVSGFAGWFTADFRGTE-ANPLPVPVLLSTAPDNGYTHWGQQVFYLE--VPHWVPRGGAVEGTLALTRQKENIRLYDV 339
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: A0A7S2D4B8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4B8_9STRA) HSP 1 Score: 122 bits (307), Expect = 5.190e-32 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 13 SLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKLRRGAPQATGFAGWFDVSFRGRDGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQA------RNPRLYNV 504
S+ W +F+ + + Y +DMS LD+ ++ E +Y+ SS W EL QVI P VK +DLHTCT+ + G+ PFSF + +GFAGWFD F G + +P + V ST+P GYTHWGQQVF+L++A+ + ++ G + M RQ + RLY+V
Sbjct: 9 SMGDWDTFTNETRNLYGVDMSCLDQPFEKEQRDYYLSSSIWCELNGDQVIGQPAAVKHMDLHTCTIKDALGVDPAPFSFTTDT-PTKVSGFAGWFDTDFAGSE-ENPATEVVTLSTAPAIGYTHWGQQVFFLEDAIDLEPED--VITGTMEMTRQKVREDREGSERLYDV 174
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Match: A0A7S2V4Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q5_9STRA) HSP 1 Score: 127 bits (320), Expect = 5.240e-32 Identity = 68/164 (41.46%), Postives = 93/164 (56.71%), Query Frame = 1
Query: 13 SLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRTQVITNPIVVKELDLHTCTLDETKGLSAVPFSFKLRRGAPQATGFAGWFDVSFRGRDGVSPLSVPVEFSTSPTKGYTHWGQQVFYLQEAVPAQSGAPMLLEGEVSMVRQARNPRLYNV 504
SL+ W +F + +Y + M+ L+ Y+ E Y+ +++W EL QV+ P +K LDLHTCT E G++ +PF F + +GFAGWF F+GR G S L V ST P GYTHWGQQVFYL + + Q G +L G M RQ N RLY++
Sbjct: 217 SLQEWHNFKAETKERYGITMATLEADYEQEQRHYYINTASWSELHPDQVVCPPQAIKHLDLHTCTQPEAAGVAELPFCFPCGTQPTRVSGFAGWFTTDFKGRVGRS-LGSEVVLSTGPEAGYTHWGQQVFYLAQPLDLQPGDKIL--GTFRMERQKENIRLYDL 377 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12746.1728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12746.1728.1 >prot_H-paniculata_contig12746.1728.1 ID=prot_H-paniculata_contig12746.1728.1|Name=mRNA_H-paniculata_contig12746.1728.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp MNFSSLESWASFSEQAMSKYALDMSGLDEAYDAECVEYFTLSSAWRELTRback to top mRNA from alignment at H-paniculata_contig12746:1245..2687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12746.1728.1 ID=mRNA_H-paniculata_contig12746.1728.1|Name=mRNA_H-paniculata_contig12746.1728.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1443bp|location=Sequence derived from alignment at H-paniculata_contig12746:1245..2687- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12746:1245..2687- >mRNA_H-paniculata_contig12746.1728.1 ID=mRNA_H-paniculata_contig12746.1728.1|Name=mRNA_H-paniculata_contig12746.1728.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig12746:1245..2687- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |