mRNA_H-paniculata_contig12711.1701.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12711.1701.1
Unique NamemRNA_H-paniculata_contig12711.1701.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: A0A6T7BPQ5_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BPQ5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.400e-22
Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 1
Query:   31 VEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
            + F HGDA DP+VCDW+DGDV+FANSTCF DALM+++A  A  LKKGA+FIT TKRLP
Sbjct:   64 IGFTHGDATDPEVCDWSDGDVLFANSTCFDDALMKKVAGQAVTLKKGAVFITFTKRLP 121          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: A0A6H5JPB2_9PHAE (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB2_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.500e-22
Identity = 49/64 (76.56%), Postives = 51/64 (79.69%), Query Frame = 1
Query:   13 GHRPAGVEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
            G     VEF  GDALD +VCDW+D  VVFANSTCF D LMRRLASAATALKKG IFITLTKRLP
Sbjct:  228 GQERTKVEFFLGDALDMNVCDWSDATVVFANSTCFDDTLMRRLASAATALKKGTIFITLTKRLP 291          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: A0A7S2RS53_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS53_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.440e-17
Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 1
Query:   31 VEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
            VEFVHGD  D    DWTDGDVVFANSTCF D+LM+ +A  A  +K G+IFITLTKRLP
Sbjct:  208 VEFVHGDVTDLATLDWTDGDVVFANSTCFDDSLMQAVAKLAGGMKMGSIFITLTKRLP 265          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: A0A7S2GDF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDF8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.150e-14
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   31 VEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
             EF  GD  D    DW++G+++FANSTCF DALM ++A  A  LKKG+IFIT TK+LP
Sbjct:   89 AEFTLGDGTDMGCLDWSNGNLIFANSTCFDDALMEKIADKAALLKKGSIFITFTKKLP 146          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: A0A6H5JVM2_9PHAE (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVM2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 6.850e-14
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:   25 AGVEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
            A +EFV GD     V DW+DGDVVFANSTCFGD LM++LA  A ALK+GAI +T+T  +P
Sbjct:  110 AEIEFVCGDFT---VLDWSDGDVVFANSTCFGDDLMKKLAQRAAALKEGAIVVTMTDPVP 166          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: D8LS24_ECTSI (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS24_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.430e-13
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:   25 AGVEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
            A +EFV GD     V DW+DGDVVFANSTCFGD LM++LA  A ALK+GAI +T+T  +P
Sbjct:  191 AEIEFVCGDFT---VLDWSDGDVVFANSTCFGDDLMKKLAQGAAALKEGAIVVTMTDPVP 247          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: A0A7S1U404_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U404_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 9.690e-13
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   31 VEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
            + F+HGDA    V DW DGDVVF NSTCFGD LM  LA+ A  LK GA  IT T++LP
Sbjct:  164 IGFIHGDAT---VLDWRDGDVVFMNSTCFGDELMETLAAQAEGLKPGAFVITTTRKLP 218          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: A0A836CL60_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL60_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.020e-12
Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   25 AGVEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
            A V F HGDA D  V DW+  DVVFANSTCF DALMR +A    +L+ GA  IT T++LP
Sbjct:  197 ATVNFWHGDATDLGVFDWSTADVVFANSTCFHDALMRSIADCCASLRVGAFVITFTRQLP 256          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: F0XWY6_AURAN (DOT1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWY6_AURAN)

HSP 1 Score: 66.6 bits (161), Expect = 2.340e-11
Identity = 32/64 (50.00%), Postives = 39/64 (60.94%), Query Frame = 1
Query:   13 GHRPAGVEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRLP 204
            G     V+F   D  D    DW+ GDVVFANSTCF D ++  +A  A  LK+GA FIT TK+LP
Sbjct:  190 GRTGPAVDFYEADVTDLGAHDWSGGDVVFANSTCFDDGMLAAVARRAARLKRGAFFITFTKKLP 253          
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Match: A0A7S1TW39_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW39_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.190e-11
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 1
Query:    4 YLSGHRPAGVEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASAATALKKGAIFITLTKRL 201
            YLS  +P  V    G  LD    DW+DGDV+FANSTCF D LMR++A  A AL+ GA  IT TK L
Sbjct:  182 YLSAAQPQEVTVHQGSFLD---YDWSDGDVIFANSTCFDDDLMRKIAVRAAALQPGAYVITFTKGL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12711.1701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6T7BPQ5_9STRA1.400e-2270.69Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A6H5JPB2_9PHAE2.500e-2276.56Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2RS53_9STRA3.440e-1768.97Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2GDF8_9STRA5.150e-1456.90Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5JVM2_9PHAE6.850e-1461.67Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
D8LS24_ECTSI1.430e-1361.67Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S1U404_9STRA9.690e-1360.34Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A836CL60_9STRA1.020e-1258.33Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
F0XWY6_AURAN2.340e-1150.00DOT1 domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S1TW39_9STRA6.190e-1154.55Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12711contigH-paniculata_contig12711:459..662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score102.1
Seed ortholog evalue1.1e-19
Seed eggNOG ortholog2880.D8LS74
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Histone methylation protein DOT1
EggNOG OGs2BR00@1,2S3F7@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size204
Cds size204
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928993.1642787-CDS-H-paniculata_contig12711:458..6621622928993.1642787-CDS-H-paniculata_contig12711:458..662Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12711 459..662 -
1691480694.2725234-CDS-H-paniculata_contig12711:458..6621691480694.2725234-CDS-H-paniculata_contig12711:458..662Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12711 459..662 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12711.1701.1prot_H-paniculata_contig12711.1701.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12711 459..662 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12711.1701.1

>prot_H-paniculata_contig12711.1701.1 ID=prot_H-paniculata_contig12711.1701.1|Name=mRNA_H-paniculata_contig12711.1701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MYLSGHRPAGVEFVHGDALDPDVCDWTDGDVVFANSTCFGDALMRRLASA
ATALKKGAIFITLTKRLP
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mRNA from alignment at H-paniculata_contig12711:459..662-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12711.1701.1 ID=mRNA_H-paniculata_contig12711.1701.1|Name=mRNA_H-paniculata_contig12711.1701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=204bp|location=Sequence derived from alignment at H-paniculata_contig12711:459..662- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATCTATCCGGACACCGGCCGGCAGGAGTGGAGTTCGTGCACGGCGA CGCGCTAGACCCGGACGTGTGCGACTGGACCGACGGCGACGTCGTGTTTG CCAACAGTACCTGCTTCGGCGATGCGCTCATGAGGAGGCTGGCGAGCGCT GCTACGGCCCTCAAGAAAGGCGCTATCTTCATCACTCTCACTAAGCGATT GCCG
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Coding sequence (CDS) from alignment at H-paniculata_contig12711:459..662-

>mRNA_H-paniculata_contig12711.1701.1 ID=mRNA_H-paniculata_contig12711.1701.1|Name=mRNA_H-paniculata_contig12711.1701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at H-paniculata_contig12711:459..662- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATCTATCCGGACACCGGCCGGCAGGAGTGGAGTTCGTGCACGGCGA
CGCGCTAGACCCGGACGTGTGCGACTGGACCGACGGCGACGTCGTGTTTG
CCAACAGTACCTGCTTCGGCGATGCGCTCATGAGGAGGCTGGCGAGCGCT
GCTACGGCCCTCAAGAAAGGCGCTATCTTCATCACTCTCACTAAGCGATT
GCCGATGTATCTATCCGGACACCGGCCGGCAGGAGTGGAGTTCGTGCACG
GCGACGCGCTAGACCCGGACGTGTGCGACTGGACCGACGGCGACGTCGTG
TTTGCCAACAGTACCTGCTTCGGCGATGCGCTCATGAGGAGGCTGGCGAG
CGCTGCTACGGCCCTCAAGAAAGGCGCTATCTTCATCACTCTCACTAAGC
GATTGCCG
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