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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1272 |
| Cds size | 705 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig127.1691.1 >prot_H-paniculata_contig127.1691.1 ID=prot_H-paniculata_contig127.1691.1|Name=mRNA_H-paniculata_contig127.1691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp
MAADLDHRSPDASQWGVGSSSGVVGVGARDGAAGGRGCSASRRAVSSSSS
SGAAAEGVIGGGGGEGRCWPSSGGRRALVGAASGSETWGSTEVEAESTEM
LDNSNNGGLVVERQSGQSGSRERSSRQQQQRACAASGGVSGCYGLTTGCD
SSSHGGGGCGGSSACRRRDRGGDTSSSSNRNSNKGKERRKCRDPVNLGAP
EGAADEREGEEEFNPSEQDEDLSVRTSILGDSNSG back to topmRNA from alignment at H-paniculata_contig127:25783..30848- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig127.1691.1 ID=mRNA_H-paniculata_contig127.1691.1|Name=mRNA_H-paniculata_contig127.1691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5066bp|location=Sequence derived from alignment at H-paniculata_contig127:25783..30848- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGGATTTTTGTTGAGAGCTGGGAGAGCATCCAGAGGGTACAAAGCTGGG
CCTCGGGATACAAAGCCAAACTTTTCCCAGCTTGCTACAGTAGACAGCAG
GGTGTTGTTACGTGACTGTAGGCAGGACCACGGAGCTAAAGATTGTACGC
GGAACTTTGATACTCTATTTTCCTGCTGTGTCCGTTGCTGTTTTCGTGGA
CTCAAGCTCGAAAAGTGTTTTCAAACCGTGGGCCGCCCTTCTGCACCAAA
AACAAAATTGTTGGGAGAAGTACTGAATTGAAGCACAGCAAGGAGGGAGC
AGCGCCGACAGAAAACGACCGGAAGCAGCGAACCTGGTGTGGGATCGTCA
GTCCCGGATACGTGGAGATCAGGGGAGGTGTGGTGATTGCTGACAGGCGG
TGCAGGTGCGCCAGTACAGCGTCGAGTAACGTGGCCGTTGTGTGTTTACA
CGTGCCTGTATCAGGCACTTTCGTCCTCCTTGTAGCTCGTGATACCTTTC
AGCAGAGGGGGAGTGACTGAGCTACGGAATATACCTGTAGGTCGGAGGTT
GCTGAGACGGAAGATAGTCAGTGCCGGGGGCGTATCGAGGATACATGCAC
AGAGATGAACAAGCGGGAACAACGACGTGTCAGCTTTCAAACGTCGGGTT
GCAGCTTTTCGTTCTCGGGTGGACGTTTGGTCTTTCTCTTCCAGTCTTCC
GATTGTGTGATTTTTTTGAGTGCTACTGCGAGGATGGTTAATTTTACGTT
TTTGGCACGTGTTTTATGTTTCATCCAACATCCGCGAAACCTCCACATCT
GAGTGGAAGTGCAGTCTGCACGAGGGGTTAACTCTCTCTATACGTAACTT
TGGAGTGCGGGGGTCCCGCACGCATCATTTGCTATTTTCAAAAACATTAC
TGTTCATCTGCCGCGTCATGTGCATCGGCTACTGACAACACCACCGTGCC
CTTTCATGACTTGTTGATGGTACTATCACCGAACCTCTTTCCCCTGCACT
GATTGGTTGGACCCCATCATCCATGATGTCCCAGACCCCATGCGACATAT
GCATATCAGCACCCTATTATAGGCAAGTTTCATTATTTTGCGCGTTGGTT
ACACCTGGTGGGAGTCACGAATATTGAGTGTAGTCAGGCCTGCCTCAAGC
AAGGTTCTGTAGGGAGGCCCAAGCCTTTTCGTCCCTCGGGGGTAGAAAAT
ACGGTCGCCCAGCTGATGAAAAGGCACATACATGCCTGAGATGAAGGTGT
GTTTTATAGTTTGACGTCTTGATGAGCCTCGTGGGCAGGGATGAACCGTC
TGTATATTTTATATGCAGACAGAGGAAATACCCAGCGAAAAGCGTTGGTT
TGACATTTTTCAAAGAGACCAATCATTGTCCATGTTTCTTTCCTGCTCTG
TGTGTTGGTGCGGAATATTCTGTGTTGTGGTATGTAGACCGGACCACGGT
TCACAAAACCAGCATAAACCCTCCTGTTTCCGCAGGTTGATGCCGTATCA
CCAGGGCTTCTCTTCGCATGTTTTTTTGCTCTAGGCGGCGTGTGGATAGA
CATGCCACGACATTGCGAATGGGTTTGGGTTTTTACTTCTACTTGATGCT
TTGCTATTTCTGCAAGAAAGAAACAACCAATACAGACGAGTCGATTTGTC
CCCTAAAGGAATGTATTCATTCCTCTCGCTGCTATAGGTTTCCAGGTGTT
GTACGAAATTCTCTCCATGTTCATTCAAACATTGAATGTTTCCGCTATTA
CAGCAACAAGGTGTTGAACGTTCGAGTTTGAATGTCTCACCGCTTGACGT
ACATGCAAGGGCGAAGGCTGGCTGCGCCTCTAGTGGGCCCGCCCAGTGGC
CACTCTTACTCTTTTTGCAGATAGACACGACGGGTTTGCGCTGCTGCGCT
GCTTCCCACCGACACACATCAGCAAATAACACTCATGAGAAAAAGGTCCC
TCTTCAATAATGCACGGAGGGTCATCCAATTCTCAAACATGGTTGCGAGT
GCATGCTGTTCCCTTAGATAAGGTGGGAACCTGGGGGTACTGCTGCCCGT
CAGTATAACAGGTCCTTTCATCGAACATACCGTACCGTCACTTATATGCA
ACCAAAAAGGAAACCGCCGCTGTTTTTTTATTTATGATAACGATGTATGA
AGGGGATGAAAAATGGACAGGGTAAATGCGCGTGGCAGTGATGACAGTGC
GAAAACACGCACGCAGAGGAGTTGGGGTTGTTCATTTGACTTTCACAAGG
CGGTGGAGTTAAAGTTAGAAATTACTCTATGGTGAAAAGCCGCGTCCACA
AGTGGGCAAATACCCAAGTCATGACAGCCCCCTCTGGGGTACCACCCCGC
GTGGTGACACCTGTCACATCCTGGTGGACCAAGAGGTGAGACAGAGGAGT
GTGAAAACGCATGGGCGGGTGCATTTGCCGGATTCGGGCGCTGACGCAGC
AGCAAGTCCTTATTCATGAGCGTGAAAAATGTGTTGCGGCATCTGTATGC
CGGAGGGTAGCGGCTTGCTTGCTGACTGACGCAAGTTCCAAACGTGGTTT
GCTCCGTGCCACCTGTCAAGTATGTAGTAGTATCAGGGAGCGCACTTTAG
AATTTTGAGTCATGCTTTAGGGCGGCTTATGACTCGTAATATAGTATGTG
TGTAATACCTCATTCACGTTGATATCTTCCGTGTTTGCGCGACAACGAGG
ATGTGCTTCGTAGTTCCGCTCTATGCACCAAACAAACCGCAATTTTTTAT
TTTTCTGTCAAGAACCAGATACTCCTTGAATTGAAAATTGTTCGATCTGT
GGGAACAAAACACCTTCCCCGGACTTTGTTCTCTGTGGGCTGTATTTATA
TGGACTAAATAGAGAGATTCTGTCATTATGTCATCATCACGGGCCATGCA
CACATGAGATTCAAACGTCCAGACTTGGTTTTGGGTGTTTTTCCGCACCA
GCCCCTCTGGACGCTATTTATGGGGCCTGCGGACGGTACATACGTTCCCC
ATTTTTCCCGTGTTGTTCCTTCAACTTCATTTTTTTGGGAGCAACGCTAT
TAGTACGTTGCGTTCTGGCATGTGCATGTTTTGGTTTGGCCATCTGGTGT
TTTATCTAGGTCAACCACTATGACACGGGTGGAGCTATGATATTGTTCCG
TCTGCAATGCCTGGTTCTGATGGTACGCTGTCACTGTGTTGTACTGCCTT
TTGCTTCAGATTTAGGCTTGAGACGGTTCTAGGTCGCTCTGCGAACGAGC
ATGTCCTCTTCGCTAGCCGCCCCACTATGGTGCGAGATGCAAACAAGCCG
GACATTGCGGGAGCACGCACAATCAGCTAATATGCGTAATCCGGTGTTTC
AATTCGGGTATCACTGAAAATCGTTCCCTTCTGTATAGCTGCCCTATGTG
TAGAAGATATGTAAAATACGCGATACCCCCTAGTATCAATGGGTTTTTGG
GGTTGTTTTTCATGTTTTATGGAATGAAAAATCAAATCTTAGTTTTCTCA
ATACAGCACATTTCATGTCAACACTTTTGGCGCCGTTCCCCATCCTACAT
CCAGTCATTATCCATTATCTATAATCCCTGCATCAAAAACAGGGGAAAAC
GACGCATGGATGGGATGAATGCCGGAATACGGAACCGTCGATGTTGAGAC
AGACAGTCCAGTCATAGACTCAATGTACTAGTTGGCATGATCTTCCCCAA
AACGACTACGGTGCTTGATATTTGTCAGATTTTTTTTGTTCCGAAGAAGC
CGCCAGTGCTTTAAGGTGTGAAGGCAGTTTAAACCTGGCCACTCTTCCCA
TTTTCTTGTCGATTTTCTCTTTTTATGCACCAAGTTTGTTTCTTCAAAAT
ATTTTGGAATTTTTGGAAATAAACGAAGTGCGGTTTTGTGCCTACAGCGC
TTGTATCCGATAAAAAAAAGTGTGCGTGTATTGTTTTTCCGACATTAAAA
TACTTCGCGTGTTACCGCTTCCGTACTTGAAACAAAAAGGAAGTCGCTGA
GACACGGGGGGGGACTATTAATAAGAGCATAAGAGTAATCGTTTTTTTGT
TCTCTCCGCGTATATGTACGCCGTGCGAAGCACACGGAAGGCAATCTTAC
ATACCATGCAAACTTTCCCTACGAACAGTCATAAACCTTCACCTTTGCGC
TGCAATGTGTCCGTCCGCTCCATCACATGGTTGTGTTTTACCCATAACAG
GACCCACAGAAGCAGGCAATTGAGTCGGTGAAAAGGAACAACCCCCGTCC
TCTCCCTCTACCAAAATTCGTCGTTATTTGCCGAAACAAGAGAAAAAACC
GAGCTGGTCTAGTTGAGAGCGTACCGGGGAAAACACTCTGTCGGGCTTCC
GCCGACATCGTATGGCGGCAGACCTTGACCATCGCTCGCCGGATGCAAGT
CAATGGGGGGTCGGTTCTTCTAGCGGAGTGGTTGGCGTAGGCGCGAGGGA
CGGCGCCGCAGGCGGCAGGGGGTGCAGTGCCAGTCGGCGAGCTGTGAGTA
GTAGCAGCAGCAGCGGCGCCGCTGCCGAAGGCGTTATCGGCGGTGGCGGA
GGGGAAGGTAGGTGTTGGCCGAGCAGCGGTGGGCGACGGGCGCTAGTGGG
GGCGGCCTCGGGGTCGGAGACGTGGGGATCGACCGAGGTTGAAGCTGAGA
GCACGGAGATGCTCGATAACAGCAATAACGGCGGGCTTGTGGTGGAGCGG
CAATCGGGGCAGTCTGGGTCTCGAGAGCGTAGTAGCAGGCAGCAGCAGCA
GCGGGCGTGCGCGGCAAGCGGCGGAGTGAGTGGTTGTTATGGTTTAACGA
CTGGTTGTGATTCTTCTTCCCACGGTGGCGGTGGTTGTGGTGGTAGTAGC
GCTTGTCGGCGACGAGATAGGGGAGGAGATACTAGTAGTAGCAGTAATAG
GAACTCGAACAAAGGTAAAGAGCGGAGGAAATGCAGAGATCCTGTAAACT
TGGGGGCCCCCGAGGGGGCAGCAGACGAGCGAGAGGGAGAGGAGGAATTT
AATCCTTCTGAACAGGACGAGGACTTGAGTGTACGCACGTCGATTCTTGG
TGATAGTAATAGTGGT back to topCoding sequence (CDS) from alignment at H-paniculata_contig127:25783..30848- >mRNA_H-paniculata_contig127.1691.1 ID=mRNA_H-paniculata_contig127.1691.1|Name=mRNA_H-paniculata_contig127.1691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at H-paniculata_contig127:25783..30848- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGCAGACCTTGACCATCGCTCGCCGGATGCAAGTCAATGGGGGGT
CGGTTCTTCTAGCGGAGTGGTTGGCGTAGGCGCGAGGGACGGCGCCGCAG
GCGGCAGGGGGTGCAGTGCCAGTCGGCGAGCTGTGAGTAGTAGCAGCAGC
AGCGGCGCCGCTGCCGAAGGCGTTATCGGCGGTGGCGGAGGGGAAGGTAG
GTGTTGGCCGAGCAGCGGTGGGCGACGGGCGCTAGTGGGGGCGGCCTCGG
GGTCGGAGACGTGGGGATCGACCGAGGTTGAAGCTGAGAGCACGGAGATG
CTCGATAACAGCAATAACGGCGGGCTTGTGGTGGAGCGGCAATCGGGGCA
GTCTGGGTCTCGAGAGCGTAGTAGCAGGCAGCAGCAGCAGCGGGCGTGCG
CGGCAAGCGGCGGAGTGAGTGGTTGTTATGGTTTAACGACTGGTTGTGAT
TCTTCTTCCCACGGTGGCGGTGGTTGTGGTGGTAGTAGCGCTTGTCGGCG
ACGAGATAGGGGAGGAGATACTAGTAGTAGCAGTAATAGGAACTCGAACA
AAGGTAAAGAGCGGAGGAAATGCAGAGATCCTGTAAACTTGGGGGCCCCC
GAGGGGGCAGCAGACGAGCGAGAGGGAGAGGAGGAATTTAATCCTTCTGA
ACAGGACGAGGACTTGAGTGTACGCACGTCGATTCTTGGTGATAGTAATA
GTGGTATGGCGGCAGACCTTGACCATCGCTCGCCGGATGCAAGTCAATGG
GGGGTCGGTTCTTCTAGCGGAGTGGTTGGCGTAGGCGCGAGGGACGGCGC
CGCAGGCGGCAGGGGGTGCAGTGCCAGTCGGCGAGCTGTGAGTAGTAGCA
GCAGCAGCGGCGCCGCTGCCGAAGGCGTTATCGGCGGTGGCGGAGGGGAA
GGTAGGTGTTGGCCGAGCAGCGGTGGGCGACGGGCGCTAGTGGGGGCGGC
CTCGGGGTCGGAGACGTGGGGATCGACCGAGGTTGAAGCTGAGAGCACGG
AGATGCTCGATAACAGCAATAACGGCGGGCTTGTGGTGGAGCGGCAATCG
GGGCAGTCTGGGTCTCGAGAGCGTAGTAGCAGGCAGCAGCAGCAGCGGGC
GTGCGCGGCAAGCGGCGGAGTGAGTGGTTGTTATGGTTTAACGACTGGTT
GTGATTCTTCTTCCCACGGTGGCGGTGGTTGTGGTGGTAGTAGCGCTTGT
CGGCGACGAGATAGGGGAGGAGATACTAGTAGTAGCAGTAATAGGAACTC
GAACAAAGGTAAAGAGCGGAGGAAATGCAGAGATCCTGTAAACTTGGGGG
CCCCCGAGGGGGCAGCAGACGAGCGAGAGGGAGAGGAGGAATTTAATCCT
TCTGAACAGGACGAGGACTTGAGTGTACGCACGTCGATTCTTGGTGATAG
TAATAGTGGT back to top
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