mRNA_H-paniculata_contig12699.1689.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 147 bits (370), Expect = 3.470e-39 Identity = 71/137 (51.82%), Postives = 90/137 (65.69%), Query Frame = 2 Query: 2 SMYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLETDYS 412 S Y +R ++L +GT +G +L++DN YHEW L+ PSK ++T +S+ LESVRK VECFFG+LKGRFRIL L + Y K E IDNIF CCILHN H DGLDV +E+ DW G G +D D TDY+ Sbjct: 61 SQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYT 197
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 145 bits (367), Expect = 6.300e-39 Identity = 72/153 (47.06%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 5 MYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLETDYSRFEIRHNFGGSEVQEVE 463 +Y ++ F +Y DGT + KG YLLVDN YH+W L+PPSK + + +SK LESVRK VECFFG++KG FRIL L I Y K EDIDN+F CCILHN H++D +EE+ +W G GL++ + D S + + +E EVE Sbjct: 62 IYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVE 214
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 146 bits (368), Expect = 1.640e-38 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = 2 Query: 5 MYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLETD 406 Y ++TF +YN+DGT T KG Y+LVDN YH+W +L+ PSK L + +SK LESVRK VECFFG+LKGR RIL+L + + E IDN+F CCILHN H DG+D L E+ +W+ G+ V + E D Sbjct: 105 QYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEAD 238
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 147 bits (370), Expect = 2.020e-38 Identity = 71/138 (51.45%), Postives = 88/138 (63.77%), Query Frame = 2 Query: 5 MYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLETDYSRF 418 Y ++TF LYNEDGT T KG Y L DN YH+W +L+ PSK L ++ +SK LESVRK VECFFG+LKGRFRIL L + Y E IDN+F CCILHN H DG+D L E+ +W+ G+ + E D F Sbjct: 150 QYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSF 287
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 148 bits (374), Expect = 9.830e-38 Identity = 73/153 (47.71%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 5 MYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLETDYSRFEIRHNFGGSEVQEVE 463 +Y ++ F +Y DGT + KG YLLVDN YH+W L+PPSK + + +SK LESVRK VECFFG++KGRFRIL L I Y K EDIDN+F CCILHN H++D +EE+ +W G GL++ + D S + + +E EVE Sbjct: 303 IYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVE 455
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.100e-35 Identity = 72/153 (47.06%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 5 MYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLETDYSRFEIRHNFGGSEVQEVE 463 +Y ++ ++LY +DG E KG YLLVDN YH+W L+PPSK + + +SK LES RK VEC+FG+LKGRFRI L I + K E IDN+F CCILHN H+ D + E+ +W G GL++ D TDYS + G E EVE Sbjct: 228 VYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYS--SVGSMDGQHEAVEVE 378
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.150e-35 Identity = 69/137 (50.36%), Postives = 87/137 (63.50%), Query Frame = 2 Query: 2 SMYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLETDYS 412 + Y ++TF +YNEDGT T KG YLLVDN YH+W +LM P+K L + +SK LESVRK VECFFG+LKG FRI + + Y + E IDN+F CCILHN H DG+D L E+ W+ G + E D S Sbjct: 244 NQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSS 380
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.900e-35 Identity = 67/120 (55.83%), Postives = 83/120 (69.17%), Query Frame = 2 Query: 14 DRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGL 373 ++TF +YNEDGT T KG YLLVDN YH+W +L+ PSK L + +SK LESVRK VECFFG+LKGRFRIL L + Y E IDN+F C ILHN H DG+D L E+ +W+ G+ Sbjct: 263 EKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 141 bits (356), Expect = 4.500e-35 Identity = 72/153 (47.06%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 5 MYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLETDYSRFEIRHNFGGSEVQEVE 463 +Y ++ ++LY +DG E KG YLLVDN YH+W L+PPSK + + +SK LES RK VEC+FG+LKGRFRI L I + K E IDN+F CCILHN H+ D + E+ +W G GL++ D TDYS + G E EVE Sbjct: 319 VYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYS--SVGSMDGQHEAVEVE 469
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.500e-34 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 2 Query: 5 MYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRWSKTLESVRKHVECFFGVLKGRFRILILLIRYGK*EDIDNIFLACCILHNTPHNHDGLDVLEEDADWMGVGGLYDPEVADLET 403 Y ++ F ++ +DGT KG YL+VDN YH+W ML+ PSK L + +SK LESVRK VECFFG+LK RFRIL L + Y K E +D +F CCILHN H HDG+ LEED +W+G L + +L++ Sbjct: 274 QYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDS 406 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12699.1689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12699.1689.1 >prot_H-paniculata_contig12699.1689.1 ID=prot_H-paniculata_contig12699.1689.1|Name=mRNA_H-paniculata_contig12699.1689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp MYRDRTFRLYNEDGTWTEHKGVYLLVDNEYHEWAMLMPPSKPTLCGEETRback to top mRNA from alignment at H-paniculata_contig12699:4952..6260+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12699.1689.1 ID=mRNA_H-paniculata_contig12699.1689.1|Name=mRNA_H-paniculata_contig12699.1689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1309bp|location=Sequence derived from alignment at H-paniculata_contig12699:4952..6260+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12699:4952..6260+ >mRNA_H-paniculata_contig12699.1689.1 ID=mRNA_H-paniculata_contig12699.1689.1|Name=mRNA_H-paniculata_contig12699.1689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=510bp|location=Sequence derived from alignment at H-paniculata_contig12699:4952..6260+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |