mRNA_H-paniculata_contig12667.1670.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: D7G376_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G376_ECTSI) HSP 1 Score: 199 bits (507), Expect = 1.310e-57 Identity = 103/157 (65.61%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 1 GKSTLLNLLTGRGAVGRCEGEIYFEGKNIVEQQDSYILKSGYMRQDNTGFLDGLTVFDNLVAGSLSGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSRKVTLVVAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAIGEVAR 471 GKSTLL+LLTGR A+GRC GE+ F GK+I Q+ SYI KSGYMR L+G N AG LSGG KRRL+LALELL DRR+LFLDEPTSGLDAT+SL+L+ ILKRLS KVTLVVAIHQPRPE+W LF+H IL+K GR V+CG +A+ + R Sbjct: 515 GKSTLLDLLTGRKAIGRCSGELMFNGKSIANQKGSYISKSGYMRAIKLTSLEGSI---NTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKVTLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPADEALSSITR 668
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: E4XSA0_OIKDI (ABC transporter domain-containing protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XSA0_OIKDI) HSP 1 Score: 99.8 bits (247), Expect = 1.290e-22 Identity = 59/163 (36.20%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 1 GKSTLLNLLTGRGAVGRCEGEIYFEGKNIVEQQDSYILKSGYMRQDNTGFLDGLTVFDNL-----VAGSLSGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSRK-VTLVVAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAIGEVAR 471 GK+TL+N+LT G IY + ++ S Y+RQ++ F+ LT+ ++L + +LSGG+++RL+LA E+L++ +ILF DEPT+GLD+T +L ++ +L +LS+ +T+V +IHQP +I +FSH IL+ G + G +++I V + Sbjct: 78 GKTTLMNVLTSNNRDLEASGNIYVNRVPVGSAISNF---SAYVRQEDI-FVGELTILEHLNFRANLKKTLSGGERKRLSLASEILSNPKILFCDEPTTGLDSTMALKVMEVLLKLSKNGMTIVCSIHQPSSKIISIFSHLILMSKGEFAYFGSYAESITFVEK 236
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: A0A388LTX5_CHABU (ABC transporter domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LTX5_CHABU) HSP 1 Score: 94.4 bits (233), Expect = 1.770e-19 Identity = 49/99 (49.49%), Postives = 71/99 (71.72%), Query Frame = 1 Query: 163 TVFDNLVAGSLSGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSRKVTLV-VAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAI 456 T+F LSGGQKRRL++A ELL ++ LDEPTSGLD+ ++LD++R+L RL+R ++ +A+HQPR EI+Q+F ILV G+AVF G ++A+ Sbjct: 741 TIFGGPNLPGLSGGQKRRLSIATELLTLPSVILLDEPTSGLDSASALDIIRLLSRLARAGRVIALAVHQPRQEIFQMFDRLILVAHGQAVFSGTPTEAM 839
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: A0A6T8JEM1_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8JEM1_HEMAN) HSP 1 Score: 93.6 bits (231), Expect = 3.200e-19 Identity = 66/193 (34.20%), Postives = 96/193 (49.74%), Query Frame = 1 Query: 1 GKSTLLNLLTGRGAVGRCEGEIYFEGKNIVEQQDSYILKSGYMRQDNTGFLDGLTVFDNLV----------------------------------------AGSLSGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSR-KVTLVVAIHQPRPEIWQLFSHTILVKSG-RAVFCGRVSQA 453 GKS+LLN+LTG+ G+ +G I G+ +Q Y G++ QD+ L+ L+V +NL A +SGG+++R+ + LEL AD +LFLDEPTSGLD+ SL +L L+R+ R T+V IHQPR I+ +F IL+K G + V+ G A Sbjct: 313 GKSSLLNVLTGKAGYGKVDGSIKINGRE--DQLHYYSRNMGFVPQDDV-MLEELSVLENLFYSAQLRLPSIDRQHLHRIVYDVLRVLGLEHIAHTRVGNVEARGISGGERKRVNIGLELTADPTLLFLDEPTSGLDSATSLKVLNALRRMCRIGSTVVTVIHQPRSLIFNMFDDIILLKKGGQVVYAGPACHA 502
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: A0A395NR68_TRIAR (Abc transporter n=9 Tax=Trichoderma TaxID=5543 RepID=A0A395NR68_TRIAR) HSP 1 Score: 93.2 bits (230), Expect = 4.510e-19 Identity = 45/88 (51.14%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 196 SGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSRKV-TLVVAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAI 456 SGG+KRR+++ ++LLA+ +LFLDEPT+GLDAT++ L+R LK L++K T++ IHQPR EIW LF + I++ G VF G VS+ + Sbjct: 219 SGGEKRRVSIGVQLLANPSVLFLDEPTTGLDATSAFQLVRTLKALAQKGRTVITTIHQPRSEIWDLFDNLIILSKGSPVFSGPVSECL 306
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: A0A2P4ZWN3_9HYPO (ABC transporter n=1 Tax=Trichoderma gamsii TaxID=398673 RepID=A0A2P4ZWN3_9HYPO) HSP 1 Score: 92.8 bits (229), Expect = 5.610e-19 Identity = 44/88 (50.00%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 196 SGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSRKV-TLVVAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAI 456 SGG+KRR+++ ++LLA+ +LFLDEPT+GLDAT++ L+R LK L++K T++ IHQPR EIW LF + +++ G VF G VS+ + Sbjct: 229 SGGEKRRVSIGVQLLANPSVLFLDEPTTGLDATSAFQLVRTLKSLAQKGRTVITTIHQPRSEIWDLFDNLVILSKGSPVFSGPVSECL 316
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: G9NXP8_HYPAI (Pleiotropic drug resistance protein n=4 Tax=Trichoderma TaxID=5543 RepID=G9NXP8_HYPAI) HSP 1 Score: 92.8 bits (229), Expect = 6.140e-19 Identity = 44/88 (50.00%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 196 SGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSRKV-TLVVAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAI 456 SGG+KRR+++ ++LLA+ +LFLDEPT+GLDAT++ L+R LK L++K T++ IHQPR EIW LF + +++ G VF G VS+ + Sbjct: 229 SGGEKRRVSIGVQLLANPSVLFLDEPTTGLDATSAFQLVRTLKSLAQKGRTVITTIHQPRSEIWDLFDNLVILSKGSPVFSGPVSECL 316
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: A0A166PB17_9HYPO (ABC-2 type transporter n=1 Tax=Moelleriella libera RCEF 2490 TaxID=1081109 RepID=A0A166PB17_9HYPO) HSP 1 Score: 92.8 bits (229), Expect = 6.150e-19 Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 1 Query: 163 TVFDNLVAGSLSGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSRKV-TLVVAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAI 456 T N G SGG+KRR+++ +++LA+ +LFLDEPT+GLDA+++ L+R LK L+RK T+V IHQPR EIW LF + I++ GR V+ G S + Sbjct: 215 TRIGNSQHGGCSGGEKRRVSIGVQMLANPSVLFLDEPTTGLDASSAYQLVRTLKGLARKGRTVVTTIHQPRSEIWNLFDNLIVLSKGRPVYAGSRSDCV 313
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: A0A6L2PP05_COPFO (Uncharacterized protein (Fragment) n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PP05_COPFO) HSP 1 Score: 87.4 bits (215), Expect = 6.380e-19 Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 184 AGSLSGGQKRRLTLALELLADRRILFLDEPTSGLDA---TASLDLLRILKRLSRKVTLVVAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAIGEVAR 471 AG LSGGQK+RL++ALEL+ + +LFLDEPT+GLD+ T + LLR+L R R T+V IHQP ++Q+F H ++ GR ++ G V Q + +A+ Sbjct: 45 AGKLSGGQKKRLSIALELITNPLVLFLDEPTTGLDSSSCTQCVSLLRLLARQGR--TIVCTIHQPSASLFQMFDHVYVLSQGRCLYQGAVQQLVPYLAQ 141
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Match: A0A2P8Y9E0_BLAGE (ATP-binding cassette sub-family G member 4 (Fragment) n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Y9E0_BLAGE) HSP 1 Score: 92.4 bits (228), Expect = 6.830e-19 Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 1 Query: 1 GKSTLLNLLTGRGAVGRCEGEIYFEGKNIVEQQ---DSYILKSGYMRQDNTGFLD-----GLTVFDNLVAGSLSGGQKRRLTLALELLADRRILFLDEPTSGLDATASLDLLRILKRLSRKV-TLVVAIHQPRPEIWQLFSHTILVKSGRAVFCGRVSQAI 456 GKSTLLN+L G G EG + GK+ + + YI++ +R T LD GL N AGSLSGGQK+RL++ALEL+++ I++LDEPT+GLD+++ + +LK L+++ T+V IHQP ++++F H + G ++ G + + Sbjct: 51 GKSTLLNILAGYKIRGS-EGSVLVNGKDNSKSRTRLSCYIMQDDALRPKLT-LLDLLEMLGLREHCNTQAGSLSGGQKKRLSIALELISNPPIIYLDEPTTGLDSSSCSQCVSLLKFLAQQGRTVVCTIHQPTALLFEMFDHLYSLAEGNCIYQGSIKSLL 209 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12667.1670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12667.1670.1 >prot_H-paniculata_contig12667.1670.1 ID=prot_H-paniculata_contig12667.1670.1|Name=mRNA_H-paniculata_contig12667.1670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp GKSTLLNLLTGRGAVGRCEGEIYFEGKNIVEQQDSYILKSGYMRQDNTGFback to top mRNA from alignment at H-paniculata_contig12667:4662..7180- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12667.1670.1 ID=mRNA_H-paniculata_contig12667.1670.1|Name=mRNA_H-paniculata_contig12667.1670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2519bp|location=Sequence derived from alignment at H-paniculata_contig12667:4662..7180- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12667:4662..7180- >mRNA_H-paniculata_contig12667.1670.1 ID=mRNA_H-paniculata_contig12667.1670.1|Name=mRNA_H-paniculata_contig12667.1670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at H-paniculata_contig12667:4662..7180- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |