mRNA_H-paniculata_contig12640.1652.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12640.1652.1
Unique NamemRNA_H-paniculata_contig12640.1652.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: D8LFI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI9_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 4.800e-141
Identity = 242/412 (58.74%), Postives = 285/412 (69.17%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISAGEQTRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADYRKFHIARTAGAVETWEALYSRRDGEVGDACSLSLHGV-VDCPGNLLAMACLPP-TISEGERSRIMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAPEEG----LRKIVAGTAHRQVRLYDTRAQKRPTHSVDADEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFD-DEGKVS-AASGGHGDEATAGTKNRGGXXXXXXXXXXXXSGEEYEMNE 1212
            MRIITADETGLVKVVR+ESG CLA+SAGEQ RA AV+ +C   D+        A     +S   + + H+AR AGAVETW+   S RDG+ G  C+LS  G  V+C    +A+ACLPP + S  E SR++TC+ +G+VQV  S  A    +   AE    SIRGP+SAA+  G               GG+ENDLK +D+ + +CTWKAKN PHDFLD+RQ VWI+SL PLA   G    L+++VAGTAHRQVRLYD RAQKRPTHSVDADEHG+TTMAVA   REVVVADTAGLVRVLDLRKM WGRRF GP GSVRGLAFHPTLP LACVGLDR ARVY Y S EQK+QVYLKQRLNAVLFD +EG+V  AA G  G++  +G K+  G            SGEEYEM+E
Sbjct:    1 MRIITADETGLVKVVRLESGECLAVSAGEQARANAVRAVCF--DHAAP-----AASRHRASDDFFARIHVARAAGAVETWDVSQSERDGQTG-GCALSARGTAVECAAAPVALACLPPASSSSSESSRVLTCNGEGEVQV--SRAAPDGRSNDEAERTTLSIRGPVSAAVADGDGGSGLALAA-----GGKENDLKTWDLGTGKCTWKAKNVPHDFLDMRQPVWITSLCPLAAATGGGGGLQQMVAGTAHRQVRLYDARAQKRPTHSVDADEHGVTTMAVAPDGREVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPTLPVLACVGLDRMARVYGYHSREQKFQVYLKQRLNAVLFDGEEGEVQVAADGEDGEKKKSGAKDGAGAGEDWSGSEGWGSGEEYEMDE 397          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: A0A835ZDI3_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.430e-61
Identity = 158/420 (37.62%), Postives = 211/420 (50.24%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISA-GEQTRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADYRKFHIARTAGAVETWEALYSRRDGE-VGDACSLSLHGVVD-CPGNLLAMACLPPTISEGERSRIMT-CSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDF-LDLRQAVWISSLRPLAP---EEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDADEHGITTMAVARG----SREVVVADTAGLVRVLDLRKMSWGRRFAGPGG-SVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQ-----VYLKQRLNAVLFDDEGKVSAASGGHGDEATAGTKNRGGXXXXXXXXXXXXSGEEYEM 1206
            MR++TADETGLVKV +VES   L     G Q+R R V+ LC              G     +  DY + H+ R  G VE W   ++   G+ +  + +++     + CP +++++  LP T SE +    M  CS  G+V+V           AAA E  +F    P+  AI  G               GGQ+ND+K++DVA+ +CTW+AKN P D  L L   VW S+L PL     +  L  ++AGTAHR +RLYDTRA +RP  ++D  EH IT + V  G    +   +V D AG +  LDLR +   RR+  PGG +VR  A HPTLP  A VGLDR  RVYD              +YLKQR + VLF DEG+  A   G  D A A  +  GG            S EEYEM
Sbjct:    1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCW-------------GLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCD-------AAAGEGSSFKAPAPVHTAIGRG----------GVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEGR--ATPDGAIDRAAAALE--GGDDGWG-------SAEEYEM 379          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: D8LW75_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LW75_BLAHO)

HSP 1 Score: 177 bits (450), Expect = 1.760e-47
Identity = 118/365 (32.33%), Postives = 178/365 (48.77%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISAGEQTRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADYRKFHIARTAGAVETWEALYSRRDGEVGDACSLSLHGVVDCPGNLLAMACLPPTISEGERSRIMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAPEEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDADEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFDDEGKVSA 1095
            MRIITADETGL+K + +E  N      G Q+R  +V+ +  +G  GC + +                  +A   G V+ W+      D  V         G+   P  L         I   E  +++TC+ DG+V + +   A           K F ++GPI+       +             GG+ENDL LYD+ + E  +KA+N P+D+L LR  +W++ ++ L P+    ++   T H  VRLYDTRA++RP  SV+      T   V+     +   DT G V  +DLR M     + G  GSVR +A HPT+  +A VGLDR  RV+D  + +Q ++VYL+Q+LN VL   EG+V++
Sbjct:    1 MRIITADETGLIKQILIE--NKRIQRWGTQSRDNSVERMVWAGMSGCEENE----------------VAVALVNGRVQVWDV-----DKTV---IVKEFSGIEGIPRGL-------GVIRNEEDRKVITCTDDGKVNLYNWKDAEIV--------KTFDVKGPIA-------NMHLCPSNNQIFAVGGRENDLALYDIETEEPVFKARNVPNDWLQLRVPIWVTDMKFLHPKSSGFELAVVTGHHHVRLYDTRAKRRPVQSVEIGSRPFTCCTVSHDENSLFTGDTIGRVSRIDLRTMQLNGVYKGNTGSVREIALHPTMEVMATVGLDRVMRVFDVATRQQLHRVYLRQKLNCVLVSSEGEVAS 317          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: A0A196SLA0_BLAHN (WD repeat-containing protein n=2 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SLA0_BLAHN)

HSP 1 Score: 176 bits (446), Expect = 1.430e-46
Identity = 114/367 (31.06%), Postives = 174/367 (47.41%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISAGEQTRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADYRKFHIARTAGAVETWEA----LYSRRDGEVGDACSLSLHGVVDCPGNLLAMACLPPTISEGERSRIMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAPEEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDADEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFDDEGKV 1089
            MRIIT D+TGL+K + +E  N      G Q+R   V+ +  +G+ G  + + G                +    G V+ W+     +     G  G AC + +                   +   E   I++C+ +G V +                  +F + GP+S                     GG+END+ LYD+   +  ++ +N P+DFL+LR  +W++ ++ L+ +    K+   T H Q+RLYDTRAQ+RP  SV+  +   T   VAR    +   DT G V  +DLR +     + G  GSVR +A HPTLP LA VGLDR  RV+D +S +Q ++VYL+Q+LNAVLF  E +V
Sbjct:    1 MRIITGDDTGLIKQILIE--NKRIQRWGTQSRENGVECMAWAGEEGNEENELG----------------VVLRNGHVQVWDVDQTEIVKEYTGIEGTACGMGI-------------------LRNQEMRHIVSCTTEGSVYLFKWDEEEAI--------DSFDVNGPVS-------KMRLCPYNNKVFAVGGRENDIALYDIEQKDAIFRGRNVPNDFLNLRVPIWVADMQFLSSDGSTHKLAVVTGHHQIRLYDTRAQRRPVQSVEIGDRPFTCCRVARDDSVLYTGDTTGRVSRIDLRTLRLSGTYKGNTGSVRDIAIHPTLPRLATVGLDRIMRVFDSESRQQLHRVYLRQQLNAVLFTSEEEV 315          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: A0A1V9YET1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YET1_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.670e-45
Identity = 126/361 (34.90%), Postives = 177/361 (49.03%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISAGEQTRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADYRKFHIARTAGAVETWEALYSRRDGEVGDACSLSLHGVVDCPGNLLAMACLPPTISEGERSRIMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIR-GPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAPEEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDADEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFDDE 1080
            MR+I  DETGLVK V +E+G    + A  Q+RA   + L  + D           + +  ++A+ R   +A   GA   W   +S +   VG                   M  LP      E   I+ C+ +G+V+VV       + AA +      ++R  P+S+ I A                GG+E DL L+D+ +   T+KAKN  HD LD+R  VW+ ++  L P  G R +V GT H QVR+YDT  ++RP       E  IT +AV      V+ +DTAG +  LDLR      R+ GP GS+R +A HPTLP +A VGLDR   VY  ++ +  +  Y KQRLNAVLF DE
Sbjct:    1 MRVIIGDETGLVKSVGLEAGTAQVLGAPGQSRATGAKYLAWTAD-----------KDVVIARANGRVDCVAAD-GADAPWT--FSSQGAPVG-------------------MGVLP------EFGSIVRCNVEGRVEVVHPLNIKPNPAAFSVGQDIHTLRVDPLSSNIIA---------------IGGKERDLNLWDLETQTATFKAKNVTHDNLDMRVPVWVKAIEFLPPSGGHR-LVVGTGHHQVRIYDTNTKRRPVQETSFGELPITAIAVK--DNRVIFSDTAGNINALDLRNFKHLGRYHGPVGSIRDIALHPTLPYMAAVGLDRMVHVYHTETRKNVHTYYAKQRLNAVLFTDE 304          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: A0A3R7JCA4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JCA4_9STRA)

HSP 1 Score: 168 bits (425), Expect = 3.490e-43
Identity = 118/366 (32.24%), Postives = 179/366 (48.91%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGN--CLAISAGEQTRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADY-RKFHIARTAGAVETWEALYSRRDGEVGDACSLSLHGVVDCPGNLLAMACLPPTISEGERSRIMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAP-EEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDA-DEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFDDEG 1083
            MR++  DETGL+K + +E      L+  A  Q RARA+Q LC  GD                  AD+ R   +AR  G VE++EAL+ +      +   L   G    P       C+   +     S ++ CS  G V V        S    A +P +F++   +                      GG+E+DL L+ + + +  +KAKN  H+ LD+R  VW+  LR L+       ++V GT HR +R+YD+  ++RP   +D+  E+ + ++ V+     V V DTAG + +LDLR +    R  GP GS+R +A HPTLP +A VGLDR   V+D  +   ++ +Y KQRLN+VLF  +G
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRILSSRAHPQARARAIQRLCWYGDE--------------REAADFQRNVVLARADGIVESYEALHGKTLSSSREPDWLWTAGEEVAPKT----RCVGLGVLHKFGS-VVQCSSSGDVLV-------RSTLEGAGKPASFNVGADLE-------KMQLEPTQQTVIGLGGKEHDLNLWSLETQQMLFKAKNVTHNNLDMRVPVWVKDLRFLSSGSSNGHRVVVGTGHRHIRIYDSNTKRRPVQQLDSFGENPVQSICVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDVNTRNYRHTIYAKQRLNSVLFCADG 333          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: A0A225VZL6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZL6_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.190e-42
Identity = 125/372 (33.60%), Postives = 183/372 (49.19%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISAGEQ--TRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADYRKFH----IARTAGAVETWEALYSRRDGEVGDACSLSLHGVVDCPGNLL--AMACLPPTISEGERSRIMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAA-ITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAP-EEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDA-DEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFDDEG 1083
            MR++  DETGL+K + +E      +S+  Q  TRAR +Q LC                  Y+ + D   F     IAR  G VE++EA +       G + S S        G     A  C+   + +   S ++ CS  G V VV + L        A +P AF++   ++   + A T              GG+E+DL L+ + + +  +KAKN  HD LD+R  VW+  LR L+       ++V GT HR VR+YD+  ++RP   +D   E+ I ++ V+     V V DTAG + +LDLR +    R  GP GS+R +A HPTLP +A VGLDR   V+D  S   ++ +Y KQRLN VLF  +G
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRVLSSRTQPQTRARGIQRLC-----------------WYADERDAANFQRNVVIARADGVVESYEASH-------GKSLSASKEPDWSWSGQEKQDATRCVGLDVIQKFGS-VVQCSDTGDV-VVRNTLEK------AGKPAAFNVGKDLNIMRLEAATQTVIGV--------GGKEHDLNLWSLETQQVLFKAKNVTHDKLDMRVPVWVKDLRFLSSGNSNGHRVVVGTGHRHVRIYDSNTKRRPVQQLDNFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDINSRNYRHTIYAKQRLNTVLFCADG 332          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: A0A0W8DWJ8_PHYNI (WD repeat-containing protein 74 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DWJ8_PHYNI)

HSP 1 Score: 163 bits (413), Expect = 1.080e-41
Identity = 120/379 (31.66%), Postives = 183/379 (48.28%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISAGEQ--TRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADY-RKFHIARTAGAVETWEALYSRRDGEVGDACSLSLHGVVDCPGNLLAMACLPPTISEGERSR------------IMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAP--EEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDA-DEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFDDEG 1083
            MR++  DETGL+K + +E      +S+ EQ   R+R +Q LC   D                  ADY R   +AR  G VE++EA + +         SLS     D           P +  E  ++R            ++ C+  G V VV S L +      A +P  F++ G ++                     GG+E+DL L+ + + +  ++AKN  HD LD+R  VW+  LR L+        +++ GT HR VR+YD+  ++RP   +D   E+ I ++ V+     V V DTAG + +LDLR +    R  GP GS+R +A HPTLP +A VGLDR   V+D  + + ++ +Y KQRLN+VLF  +G
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRILSSREQPQARSRGIQRLCWYADE--------------RDAADYQRNVVLARADGVVESYEASHGK---------SLSAAKEPDWSW--------PASDKEQSKTRCVGLDVIRKFGSVVQCTDTGDV-VVRSTLED------AGKPATFNVDGDLN-------MMRLEPATQTVIGVGGKEHDLNLWSLETQQVLFRAKNVTHDKLDMRVPVWVKDLRFLSTPGNSNGHRVIVGTGHRHVRIYDSNTKRRPVQQLDNFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDVNTRKYRHTIYAKQRLNSVLFCADG 334          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: A0A1W0A9N6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9N6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.250e-41
Identity = 120/365 (32.88%), Postives = 180/365 (49.32%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISAGEQTRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADYRKFHIARTAGAVETWEALYSRRDGEVGDACSLSLHGVVDCPGNLLAMACLPPTISEGERSRIMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAPEEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDADEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFDDEGKVSA 1095
            MR+I  DETGLVK V +E+   + +    Q+R+ + + L  + D           + +  ++A+ +   +A T G    W               S +  G+       + M  LP      +   I+ C+ +G V+VV  PL N        +P++FS+   I                      GG E D  L+D+ + +  +KAKN  HD LD+R  VW+ ++  L P EG R +V GTA+ Q+R+YDT+ ++RP   V   +  IT+MAV      V+  DTAG +  LDLR +    R+AG  GS+R +A HPT+P +A VGLDR   VY+ +S +     Y KQRLN+VLF DEG  +A
Sbjct:    1 MRVIIGDETGLVKNVALEADTFVHLGGSTQSRSTSAKYLAWTED-----------KDVVVARANGKVDSLA-TDGTETPW---------------SFTSEGIP------VGMGVLP------DFGSIVRCNVNGNVEVVH-PL-NIKP-----KPQSFSVGHDIQV-------LRVDPLNSNVIAIGGNERDANLWDLETQQAIFKAKNVTHDNLDMRVPVWVKAISFLPPSEGQR-LVVGTAYHQIRIYDTKTKRRPVQEVSFGDLPITSMAVHEN--RVIFGDTAGNINALDLRTLKHLGRYAGSVGSIRDIAIHPTMPYMAAVGLDRMVHVYNIESRKSYATHYAKQRLNSVLFTDEGIKAA 309          
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Match: H3GEE5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEE5_PHYRM)

HSP 1 Score: 165 bits (418), Expect = 5.760e-41
Identity = 120/377 (31.83%), Postives = 184/377 (48.81%), Query Frame = 1
Query:    1 MRIITADETGLVKVVRVESGNCLAISAGEQ--TRARAVQTLCHSGDYGCTQGDGGAGRTLYSSKADYRKFHIA-RTAGAVETWEALYSRRDGEVGDACSLSLHGVVDCPGNLLAMACLPPTISEGERSR------------IMTCSKDGQVQVVSSPLANTSAAAAAAEPKAFSIRGPISAAITAGTSAXXXXXXXXXXXXGGQENDLKLYDVASSECTWKAKNAPHDFLDLRQAVWISSLRPLAPEEGLRKIVAGTAHRQVRLYDTRAQKRPTHSVDA-DEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSWGRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQRLNAVLFDDEG 1083
            MR++  DETGL+K + +E      +S+ EQ   R R +Q LC  GD                  A++++  +A R  G VE++EA + +         SLS     D           P    E +R+R            ++ CS  G V +V S L +      A +P +F++ G +                      GG+E+DL L+ + + +  ++AKN  HD LD+R  VW+  LR L+      ++V G+ HR VR+YDT  ++RP   +D   E+ I ++ V+     + V DTAG + +LDLR +    R  GP GS+R +A HPTLP +A VGLDR   V+D  + + ++ VY KQRLN+VLF  +G
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRILSSREQPQARVRGIQRLCWYGDE--------------REAANFQRNVVAARADGVVESYEASHGK---------SLSATREPDWSW--------PAQDKEQDRTRCVGLDVVQKFGSVVQCSDAGDV-LVRSTLQD------AGKPASFNVGGDLHI-------MRLEAAAQTVIGVGGKEHDLNLWSLETQQMLFRAKNVSHDKLDMRVPVWVKDLRFLSGTSNGHRVVVGSGHRHVRIYDTNTKRRPVQQLDNFGENPIQSLCVSPDETRIYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDINTRKYRHTVYTKQRLNSVLFCADG 332          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12640.1652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFI9_ECTSI4.800e-14158.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDI3_9STRA1.430e-6137.62Quinon protein alcohol dehydrogenase-like superfam... [more]
D8LW75_BLAHO1.760e-4732.33Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
A0A196SLA0_BLAHN1.430e-4631.06WD repeat-containing protein n=2 Tax=Blastocystis ... [more]
A0A1V9YET1_9STRA6.670e-4534.90Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A3R7JCA4_9STRA3.490e-4332.24Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A225VZL6_9STRA2.190e-4233.60Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A0W8DWJ8_PHYNI1.080e-4131.66WD repeat-containing protein 74 n=10 Tax=Phytophth... [more]
A0A1W0A9N6_9STRA1.250e-4132.88Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
H3GEE5_PHYRM5.760e-4131.83Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12640contigH-paniculata_contig12640:888..2579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score428.3
Seed ortholog evalue5.1e-117
Seed eggNOG ortholog2880.D8LFI9
Preferred nameWDR74
KEGG koko:K14841
Hectar predicted targeting categoryother localisation
GOsGO:0001701,GO:0001824,GO:0001825,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0016070,GO:0019725,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0042254,GO:0042273,GO:0042592,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0046716,GO:0048646,GO:0048856,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.ribosomal large subunit biogenesis
EggNOG OGsKOG3881@1,KOG3881@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-04_002020.1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons2
Model size1575
Cds size1575
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928986.7348657-CDS-H-paniculata_contig12640:887..11691622928986.7348657-CDS-H-paniculata_contig12640:887..1169Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12640 888..1169 -
1691480691.5334942-CDS-H-paniculata_contig12640:887..11691691480691.5334942-CDS-H-paniculata_contig12640:887..1169Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12640 888..1169 -
1622928986.747958-CDS-H-paniculata_contig12640:1286..25791622928986.747958-CDS-H-paniculata_contig12640:1286..2579Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12640 1287..2579 -
1691480691.5441263-CDS-H-paniculata_contig12640:1286..25791691480691.5441263-CDS-H-paniculata_contig12640:1286..2579Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12640 1287..2579 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12640.1652.1prot_H-paniculata_contig12640.1652.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12640 888..2579 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12640.1652.1

>prot_H-paniculata_contig12640.1652.1 ID=prot_H-paniculata_contig12640.1652.1|Name=mRNA_H-paniculata_contig12640.1652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=525bp
MRIITADETGLVKVVRVESGNCLAISAGEQTRARAVQTLCHSGDYGCTQG
DGGAGRTLYSSKADYRKFHIARTAGAVETWEALYSRRDGEVGDACSLSLH
GVVDCPGNLLAMACLPPTISEGERSRIMTCSKDGQVQVVSSPLANTSAAA
AAAEPKAFSIRGPISAAITAGTSAGGGGGGGASLAAGGQENDLKLYDVAS
SECTWKAKNAPHDFLDLRQAVWISSLRPLAPEEGLRKIVAGTAHRQVRLY
DTRAQKRPTHSVDADEHGITTMAVARGSREVVVADTAGLVRVLDLRKMSW
GRRFAGPGGSVRGLAFHPTLPCLACVGLDRTARVYDYKSAEQKYQVYLKQ
RLNAVLFDDEGKVSAASGGHGDEATAGTKNRGGGDGSGSEEEGWGSGEEY
EMNEDSSSEDDDEDNTYGAAGNSNRVAQQARRVIENGSRGPAGGGDSSSG
SSEEDYNGSEEDGEGGLGIREAGGGGSSDGRDDGGDDSDESDSGWDEEES
EEEIVPFPKRHVAAASSSSKKRRR*
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mRNA from alignment at H-paniculata_contig12640:888..2579-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12640.1652.1 ID=mRNA_H-paniculata_contig12640.1652.1|Name=mRNA_H-paniculata_contig12640.1652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig12640:888..2579- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGAATCATCACCGCTGATGAGACTGGCCTCGTGAAGGTGGTGCGGGT TGAGAGCGGTAATTGCTTGGCGATAAGCGCAGGGGAACAGACTAGAGCAC GTGCTGTCCAGACGCTGTGCCACAGTGGTGATTACGGTTGCACTCAAGGT GATGGTGGAGCAGGCAGGACGTTATACTCCAGCAAGGCAGACTACAGGAA ATTTCATATAGCCCGCACGGCAGGAGCAGTGGAGACGTGGGAAGCTTTGT ACTCAAGACGGGATGGTGAAGTCGGAGACGCGTGCTCGCTAAGCCTTCAT GGAGTGGTAGATTGCCCTGGCAACCTGTTAGCAATGGCATGCCTCCCACC AACGATATCCGAAGGCGAGCGCTCACGCATCATGACTTGCAGCAAAGATG GGCAAGTTCAGGTGGTCAGCTCACCCTTGGCCAACACCAGCGCCGCCGCC GCCGCCGCGGAGCCGAAAGCTTTCTCTATCCGCGGTCCAATCAGTGCGGC AATAACAGCGGGGACCAGTGCAGGCGGCGGCGGCGGCGGCGGTGCTTCGC TCGCGGCAGGGGGACAAGAGAACGACCTCAAGCTCTACGATGTTGCAAGC TCTGAGTGCACCTGGAAAGCCAAGAACGCGCCTCATGACTTTCTCGACCT GCGACAGGCCGTGTGGATATCATCGCTGCGGCCGCTGGCACCTGAGGAAG GCTTGCGGAAAATTGTGGCAGGAACAGCGCACCGCCAGGTGCGCCTGTAC GACACGCGCGCCCAAAAACGGCCAACTCACTCGGTAGACGCAGACGAGCA CGGCATTACCACCATGGCCGTCGCGCGCGGCAGCCGAGAGGTTGTTGTGG CAGACACGGCAGGGCTAGTGCGTGTGTTGGACCTACGCAAGATGAGCTGG GGTCGGCGCTTCGCGGGGCCCGGGGGTTCCGTGAGAGGTTTGGCGTTTCA TCCTACCCTGCCGTGCCTCGCGTGTGTCGGCCTGGATCGCACGGCCAGGG TGTATGACTACAAATCTGCTGAGCAGAAGTACCAGGTTTACCTCAAGCAG AGGCTTAACGCGGTGTTGTTTGATGACGAAGGGAAGGTGAGCGCAGCCTC CGGCGGACACGGTGATGAAGCTACCGCTGGAACCAAAAACCGCGGTGGTG GTGATGGGTCGGGTAGCGAGGAAGAGGGCTGGGGGTCTGGAGAAGAATAT GAAATGAATGAAGACAGCAGCTCAGAGGACGACGACGAGGATAACACATA CGGCGCAGCCGGTAACAGCAACAGGGTTGCGCAACAGGCAAGGGTTCAGG GCAGTAGTGATGAAAATGACGACACCGATGCGAGCGGGGATGAAGAAGAT GGGAGCAAAAACGTTGGGAGGGGTGGCGGTAGTGGTCCACGGCGAGGGGG GACGGAGCAGAGAGTCATTGAGAACGGTAGCAGGGGGCCGGCGGGTGGGG GTGATAGTAGTAGCGGTAGCAGTGAGGAGGACTACAATGGCAGCGAAGAA GATGGGGAGGGGGGTCTTGGCATAAGGGAGGCAGGCGGGGGTGGGAGTTC CGACGGGCGGGATGACGGCGGTGATGATAGCGATGAAAGCGATAGTGGCT GGGACGAAGAGGAATCAGAAGAAGAGATTGTGCCGTTCCCAAAGCGGCAC GTTGCAGCTGCCAGCTCTTCCTCGAAAAAGAGACGGAGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig12640:888..2579-

>mRNA_H-paniculata_contig12640.1652.1 ID=mRNA_H-paniculata_contig12640.1652.1|Name=mRNA_H-paniculata_contig12640.1652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3150bp|location=Sequence derived from alignment at H-paniculata_contig12640:888..2579- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGAATCATCACCGCTGATGAGACTGGCCTCGTGAAGGTGGTGCGGGT
TGAGAGCGGTAATTGCTTGGCGATAAGCGCAGGGGAACAGACTAGAGCAC
GTGCTGTCCAGACGCTGTGCCACAGTGGTGATTACGGTTGCACTCAAGGT
GATGGTGGAGCAGGCAGGACGTTATACTCCAGCAAGGCAGACTACAGGAA
ATTTCATATAGCCCGCACGGCAGGAGCAGTGGAGACGTGGGAAGCTTTGT
ACTCAAGACGGGATGGTGAAGTCGGAGACGCGTGCTCGCTAAGCCTTCAT
GGAGTGGTAGATTGCCCTGGCAACCTGTTAGCAATGGCATGCCTCCCACC
AACGATATCCGAAGGCGAGCGCTCACGCATCATGACTTGCAGCAAAGATG
GGCAAGTTCAGGTGGTCAGCTCACCCTTGGCCAACACCAGCGCCGCCGCC
GCCGCCGCGGAGCCGAAAGCTTTCTCTATCCGCGGTCCAATCAGTGCGGC
AATAACAGCGGGGACCAGTGCAGGCGGCGGCGGCGGCGGCGGTGCTTCGC
TCGCGGCAGGGGGACAAGAGAACGACCTCAAGCTCTACGATGTTGCAAGC
TCTGAGTGCACCTGGAAAGCCAAGAACGCGCCTCATGACTTTCTCGACCT
GCGACAGGCCGTGTGGATATCATCGCTGCGGCCGCTGGCACCTGAGGAAG
GCTTGCGGAAAATTGTGGCAGGAACAGCGCACCGCCAGGTGCGCCTGTAC
GACACGCGCGCCCAAAAACGGCCAACTCACTCGGTAGACGCAGACGAGCA
CGGCATTACCACCATGGCCGTCGCGCGCGGCAGCCGAGAGGTTGTTGTGG
CAGACACGGCAGGGCTAGTGCGTGTGTTGGACCTACGCAAGATGAGCTGG
GGTCGGCGCTTCGCGGGGCCCGGGGGTTCCGTGAGAGGTTTGGCGTTTCA
TCCTACCCTGCCGTGCCTCGCGTGTGTCGGCCTGGATCGCACGGCCAGGG
TGTATGACTACAAATCTGCTGAGCAGAAGTACCAGGTTTACCTCAAGCAG
AGGCTTAACGCGGTGTTGTTTGATGACGAAGGGAAGGTGAGCGCAGCCTC
CGGCGGACACGGTGATGAAGCTACCGCTGGAACCAAAAACCGCGGTGGTG
GTGATGGGTCGGGTAGCGAGGAAGAGGGCTGGGGGTCTGGAGAAGAATAT
GAAATGAATGAAGACAGCAGCTCAGAGGACGACGACGAGGATAACACATA
CGGCGCAGCCGGTAACAGCAACAGGGTTGCGCAACAGGCAAGGATGCGAA
TCATCACCGCTGATGAGACTGGCCTCGTGAAGGTGGTGCGGGTTGAGAGC
GGTAATTGCTTGGCGATAAGCGCAGGGGAACAGACTAGAGCACGTGCTGT
CCAGACGCTGTGCCACAGTGGTGATTACGGTTGCACTCAAGGTGATGGTG
GAGCAGGCAGGACGTTATACTCCAGCAAGGCAGACTACAGGAAATTTCAT
ATAGCCCGCACGGCAGGAGCAGTGGAGACGTGGGAAGCTTTGTACTCAAG
ACGGGATGGTGAAGTCGGAGACGCGTGCTCGCTAAGCCTTCATGGAGTGG
TAGATTGCCCTGGCAACCTGTTAGCAATGGCATGCCTCCCACCAACGATA
TCCGAAGGCGAGCGCTCACGCATCATGACTTGCAGCAAAGATGGGCAAGT
TCAGGTGGTCAGCTCACCCTTGGCCAACACCAGCGCCGCCGCCGCCGCCG
CGGAGCCGAAAGCTTTCTCTATCCGCGGTCCAATCAGTGCGGCAATAACA
GCGGGGACCAGTGCAGGCGGCGGCGGCGGCGGCGGTGCTTCGCTCGCGGC
AGGGGGACAAGAGAACGACCTCAAGCTCTACGATGTTGCAAGCTCTGAGT
GCACCTGGAAAGCCAAGAACGCGCCTCATGACTTTCTCGACCTGCGACAG
GCCGTGTGGATATCATCGCTGCGGCCGCTGGCACCTGAGGAAGGCTTGCG
GAAAATTGTGGCAGGAACAGCGCACCGCCAGGTGCGCCTGTACGACACGC
GCGCCCAAAAACGGCCAACTCACTCGGTAGACGCAGACGAGCACGGCATT
ACCACCATGGCCGTCGCGCGCGGCAGCCGAGAGGTTGTTGTGGCAGACAC
GGCAGGGCTAGTGCGTGTGTTGGACCTACGCAAGATGAGCTGGGGTCGGC
GCTTCGCGGGGCCCGGGGGTTCCGTGAGAGGTTTGGCGTTTCATCCTACC
CTGCCGTGCCTCGCGTGTGTCGGCCTGGATCGCACGGCCAGGGTGTATGA
CTACAAATCTGCTGAGCAGAAGTACCAGGTTTACCTCAAGCAGAGGCTTA
ACGCGGTGTTGTTTGATGACGAAGGGAAGGTGAGCGCAGCCTCCGGCGGA
CACGGTGATGAAGCTACCGCTGGAACCAAAAACCGCGGTGGTGGTGATGG
GTCGGGTAGCGAGGAAGAGGGCTGGGGGTCTGGAGAAGAATATGAAATGA
ATGAAGACAGCAGCTCAGAGGACGACGACGAGGATAACACATACGGCGCA
GCCGGTAACAGCAACAGGGTTGCGCAACAGGCAAGGAGAGTCATTGAGAA
CGGTAGCAGGGGGCCGGCGGGTGGGGGTGATAGTAGTAGCGGTAGCAGTG
AGGAGGACTACAATGGCAGCGAAGAAGATGGGGAGGGGGGTCTTGGCATA
AGGGAGGCAGGCGGGGGTGGGAGTTCCGACGGGCGGGATGACGGCGGTGA
TGATAGCGATGAAAGCGATAGTGGCTGGGACGAAGAGGAATCAGAAGAAG
AGATTGTGCCGTTCCCAAAGCGGCACGTTGCAGCTGCCAGCTCTTCCTCG
AAAAAGAGACGGAGGTAAAGAGTCATTGAGAACGGTAGCAGGGGGCCGGC
GGGTGGGGGTGATAGTAGTAGCGGTAGCAGTGAGGAGGACTACAATGGCA
GCGAAGAAGATGGGGAGGGGGGTCTTGGCATAAGGGAGGCAGGCGGGGGT
GGGAGTTCCGACGGGCGGGATGACGGCGGTGATGATAGCGATGAAAGCGA
TAGTGGCTGGGACGAAGAGGAATCAGAAGAAGAGATTGTGCCGTTCCCAA
AGCGGCACGTTGCAGCTGCCAGCTCTTCCTCGAAAAAGAGACGGAGGTAA
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