mRNA_H-paniculata_contig12631.1646.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig12631.1646.1
Unique Name	mRNA_H-paniculata_contig12631.1646.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.320e-28
Identity = 67/168 (39.88%), Postives = 92/168 (54.76%), Query Frame = 1

Query:   88 LGHSRCLDAFIIVLNECCSGVGSGLSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSLEGVVWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQLTFGSLF 591
            L H+ CL + I+ LNE C G     STK LQ A+LE CIACR +  +H+ V+   PR L A +   P            +  TRVP LRAR+VTW    A  + +  + + +V+ + FG  F+ SLE V WP  ++ I+F   S F+QP+E + WP SLQ L  G  F
Sbjct:    9 LTHNPCLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPP-------PHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVLGGDF 169

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 5.050e-27
Identity = 70/163 (42.94%), Postives = 91/163 (55.83%), Query Frame = 1

Query:  103 CLDAFIIVLNECCSGVGSGLSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSLEGVVWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQLTFGSLF 591
            CL+A I+ LNE C G     STK LQLA+L+ CIACR   T+H+ V+   PRRL A +   P            +  TRVP LR+R VTW    A  +    + + ++EY+ FG  F  SLE V WP  +R ++F + S FDQ IE V WP  LQ +TFG  F
Sbjct:   51 CLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPP-------PHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDF 206

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 3.680e-25
Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = 1

Query:   97 SRCLDAFIIVLNECCSGVGSGLSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSLEGVVWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQLTFGSLF 591
            S CL    + LNE C G     STK LQLA+LELC+ACR + TLH+ V+ +TPRRL A       A+ + +     +  TRVP LRAR  TW    A  M    +   +V+Y+ FG  F+ SL+ +VWP  ++ I+F+  S  ++ ++ V+WP SL+++  G  F
Sbjct:  134 SSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLA-------AADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKVCLGHDF 291

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 8.970e-21
Identity = 63/157 (40.13%), Postives = 85/157 (54.14%), Query Frame = 1

Query:  103 CLDAFIIVLNECCSGVGSGLSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSLEGVVWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQL 573
            CL+A  + L E   G     STK LQLA+LE C+ACR + TLH+IV+   PR L A +   P            ++  RVP LRAR VTW    A  +    + L +++++ FG  F  SLE V WP  +  I F N S F+ PI+ V WP SL++L
Sbjct:   36 CLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPP-------QHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLKRL 185

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 4.530e-18
Identity = 65/177 (36.72%), Postives = 89/177 (50.28%), Query Frame = 1

Query:   91 GHSRCLDAFIIVLNECCSGVGSG--LSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNR--------SLEGVVWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQLTFGSLF 591
            G+S+CLDAF++ LN+ C G      +ST  LQL +LE+C ACR   TLHV V   TP  LW  S  +   +T+ N        +RVPV++A  +TW             Q  +   VR G    R        SLE  VWP  ++R+ F++    D  +   +WP SLQQL+FG  F
Sbjct:    5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNH---TTTNNRSPKVCISSRVPVVQAFGLTWALPMGVL------QQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFES----DMTVNTASWPASLQQLSFGCGF 168

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 9.090e-18
Identity = 62/145 (42.76%), Postives = 77/145 (53.10%), Query Frame = 1

Query:  139 CSGVGSGLSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSLEGVVWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQL 573
            C G     STK LQ A+LE CIACR + TL + V+  TPR L A       A  + +  S     TRVP LRAR V W    A  +    + L +V  + FGP F  SLE V WP  ++ IDF   S F+QPIE V +P SL +L
Sbjct:    2 CDGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLA-------AVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLEL 139

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.920e-16
Identity = 68/186 (36.56%), Postives = 89/186 (47.85%), Query Frame = 1

Query:   16 YVAMFPTGSKKAREDFSEGEVDRKLGHSRCLDAFIIVLNECCSGVGSGLSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSLEGVVWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQL 573
            Y+A+ P G +      S G  D            I+ LNE C G     STK LQLA+LE C+ACR +  L + V+  TPR L A     P         +     TRVP LRAR V W    A  +    + L +V  +RFG  FN SLE VVWP  +++I F + S+F+Q         SLQ+L
Sbjct:    4 YIAILPAGRR-----CSSGSKD-----------LILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPP-------PHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFS-SEFNQXXXXXXXXASLQKL 165

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 4.170e-16
Identity = 61/170 (35.88%), Postives = 84/170 (49.41%), Query Frame = 1

Query:   85 KLGHSRCLDAFIIVLNECCSGVGSGLSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSL-EGVVWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQLTFGSLF 591
            + G SRCLDA II LN+  SG     ST  LQLA+LELC +CR+   L + V   TP RLW  +     A+T           TRVPV+RAR VTW        +      + V     GP F+  L  G+ WP  +  +       F++ +E ++ P S++ L FG+ F
Sbjct:    6 RAGPSRCLDALIIALNQA-SGGEWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGT-----ATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLLGLG--PGFNRSVEHLSLPASVRFLVFGASF 167

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BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 4.980e-15
Identity = 58/140 (41.43%), Postives = 78/140 (55.71%), Query Frame = 1

Query:   97 SRCLDAFIIVLNECCSGVGSGLSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSLEGV-VWPG--GVRRIDF 507
            S CL+A +I LNE C+G     STK LQLA+LE C+ACR + TLH+ V+   PRRL AR+   P            +  TRVP LRAR VTW    A  +S   + + +V+ ++FG     SLE + +W G  G +R  F
Sbjct:  111 SSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPEL-------LCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFGET---SLEALRLWHGRDGWKRSSF 240

[Close]

BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.930e-14
Identity = 68/177 (38.42%), Postives = 89/177 (50.28%), Query Frame = 1

Query:   91 GHSRCLDAFIIVLNECCSGVGSG--LSTKALQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYNVAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVE------YVRFGPNFNR-SLEGVVW-PGGVRRIDFQNCSKFDQPIERVAWPTSLQQLTFGSLF 591
            G S CL AFI+ LN+ C+G       ST  LQL +LE C ACR   TLHV V+R TPR LW+    +  A+T   S    V+  RVP ++A  +TW A D E +     Q + VE      Y R   N +  SL  + W    ++R+ F +    D P    +WP SL QL FG  F
Sbjct:   13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSH--ATTKKRSREACVS-NRVPAVQASGLTW-ALDMEVL----LQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDS----DMPASTASWPASLPQLLFGDRF 177

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig12631.1646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
D7FH81_ECTSI	3.320e-28	39.88	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JRF9_9PHAE	5.050e-27	42.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KPY7_9PHAE	3.680e-25	39.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZZ4_9PHAE	8.970e-21	40.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KNI6_9PHAE	4.530e-18	36.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JYF0_9PHAE	9.090e-18	42.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRK5_9PHAE	2.920e-16	36.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FT95_ECTSI	4.170e-16	35.88	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G2S9_ECTSI	4.980e-15	41.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KLV1_9PHAE	1.930e-14	38.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig12631	contig	H-paniculata_contig12631:2354..5438 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	2
Model size	2505
Cds size	1485
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig12631.1646.1	prot_H-paniculata_contig12631.1646.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig12631 3350..5414 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928986.1735792-UTR-H-paniculata_contig12631:2353..3349	1622928986.1735792-UTR-H-paniculata_contig12631:2353..3349	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12631 2354..3349 -
1691480691.284777-UTR-H-paniculata_contig12631:2353..3349	1691480691.284777-UTR-H-paniculata_contig12631:2353..3349	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12631 2354..3349 -
1622928986.2920148-UTR-H-paniculata_contig12631:5414..5438	1622928986.2920148-UTR-H-paniculata_contig12631:5414..5438	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12631 5415..5438 -
1691480691.3101025-UTR-H-paniculata_contig12631:5414..5438	1691480691.3101025-UTR-H-paniculata_contig12631:5414..5438	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12631 5415..5438 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928986.2668207-CDS-H-paniculata_contig12631:3349..4767	1622928986.2668207-CDS-H-paniculata_contig12631:3349..4767	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12631 3350..4767 -
1691480691.2934864-CDS-H-paniculata_contig12631:3349..4767	1691480691.2934864-CDS-H-paniculata_contig12631:3349..4767	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12631 3350..4767 -
1622928986.2793956-CDS-H-paniculata_contig12631:5347..5414	1622928986.2793956-CDS-H-paniculata_contig12631:5347..5414	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12631 5348..5414 -
1691480691.3014717-CDS-H-paniculata_contig12631:5347..5414	1691480691.3014717-CDS-H-paniculata_contig12631:5347..5414	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12631 5348..5414 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig12631:2354..5438-
coding sequence from alignment at H-paniculata_contig12631:2354..5438-

protein sequence of mRNA_H-paniculata_contig12631.1646.1

>prot_H-paniculata_contig12631.1646.1 ID=prot_H-paniculata_contig12631.1646.1|Name=mRNA_H-paniculata_contig12631.1646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=495bp
MFPTGSKKAREDFSEGEVDRKLGHSRCLDAFIIVLNECCSGVGSGLSTKA
LQLAALELCIACRTFSTLHVIVNRNTPRRLWARSSEYPLASTSGNSGSYN
VAPTRVPVLRARAVTWMAADAEFMSHYNYQLANVEYVRFGPNFNRSLEGV
VWPGGVRRIDFQNCSKFDQPIERVAWPTSLQQLTFGSLFNQRLEGVAWPA
SLQQLKFGTLFNQRVDGVAWPASLQQLTFGDDFNQRIEGVAWPACLQKLT
FGHWFNQCVQKVVWPASLQQLTFGRDFDQPIVGVAWPTSLQQLTFGRHFK
QDIQRVAWPTSLEKLTFGFFFNRPIVGVAWPAALQQLTFGYRFSQPIEAV
VWPTSLQQLTFGVSFNSRVEDATWTASLQQLTFGRQFDQVIEGVMWPPSL
LQLTFGNWFNRPIEGVAWPASLQQLMFGFSFNQRIEGVTWPASLQQLTFG
GLFNQRIEKVVWPSSLQQLTFGVLFNQPIAEAVWPASLQQLTFG*

mRNA from alignment at H-paniculata_contig12631:2354..5438-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig12631.1646.1 ID=mRNA_H-paniculata_contig12631.1646.1|Name=mRNA_H-paniculata_contig12631.1646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3085bp|location=Sequence derived from alignment at H-paniculata_contig12631:2354..5438- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGTGCTGGGTGGCCTACGTTGCAATGTTCCCCACTGGGTCGAAAAAGGC
GAGAGAGGACTTCTCTGAAGGCGAGGTGGATAGGAAATTAGGTGAGAGGG
GCGCCGTAAGATTATCTACATGGTAAATGTGGGTGTGAGTAACATAGACG
AAAGCAACACGCAGCGTAAGAACAGGTTCAACGCTGTTCGTTGAGAAAGT
GTAAAATCTACGTTTGTGGTGCAGCATTTGGCGCGTTGCGTCCTGTCGAG
AAAGCTGGGTGGGAAACCCCTGCTCCCTCGGAGCGGGTGTAACAACTTAT
TCCATATGCACAATGGTCACTCCCTCGCAAGGTACTCACAAGATGTCATG
CGCTTGCTGGTGTCATCAAGATCGTTCGTACTTTTACTGTCCGAATTTTG
AGTATTTTGGAGCGACACGCTATCGAGACCATGATGGATATCACATCACA
CATGAAGCATGCGGCCGAAAATAAAAATCTCCACCAATGGCTATCGCGAC
ACTTTTCGTTGGCTATCGCAACGATTTTGGCAAGCGAACCCAATCCCGCC
ATGCTTTACCGCGAGAAATATCTTGAGCGCGAGTCTCCACCCCGTAAAGC
TGCTCTACTGTAGTGCTCGGCAGAACTGCACGCATGACCCAATGAGAGTA
CGTTATTTCTCCTTGTTTCAGGCCACAGCCGGTGTCTCGATGCCTTCATC
ATCGTGCTGAACGAGTGTTGTTCTGGTGTAGGGTCTGGTCTGTCGACCAA
GGCCCTGCAGTTGGCAGCCCTCGAGTTGTGCATCGCGTGCCGCACCTTCA
GTACGCTTCATGTGATCGTTAATAGAAACACGCCGCGACGACTATGGGCG
AGGTCTAGTGAATACCCACTGGCTTCAACGAGTGGCAACTCGGGGAGCTA
CAATGTCGCTCCGACCCGCGTGCCGGTGTTGCGAGCGCGTGCGGTGACGT
GGATGGCTGCTGATGCCGAATTCATGTCTCACTACAACTATCAGCTAGCG
AACGTGGAATACGTGCGATTTGGCCCCAATTTCAACCGCAGTCTGGAGGG
CGTGGTATGGCCCGGGGGAGTTAGGCGAATCGATTTTCAAAACTGTTCGA
AATTCGACCAGCCCATTGAAAGGGTGGCATGGCCAACCTCGCTGCAGCAG
TTGACATTCGGGAGCCTGTTCAACCAGCGTCTCGAGGGAGTGGCATGGCC
TGCATCTTTACAGCAGTTGAAATTTGGAACGCTCTTCAACCAGCGTGTTG
ACGGGGTGGCATGGCCTGCCTCGCTGCAGCAGTTGACGTTCGGCGATGAT
TTCAACCAGCGTATTGAGGGAGTGGCATGGCCTGCCTGCCTGCAGAAGTT
GACGTTTGGGCATTGGTTTAATCAGTGTGTTCAGAAGGTGGTATGGCCTG
CCTCGCTGCAGCAGCTGACATTCGGGAGAGATTTCGACCAGCCTATCGTG
GGGGTGGCATGGCCTACCTCGCTACAGCAGCTGACATTTGGGAGGCACTT
CAAACAGGACATTCAGCGGGTGGCATGGCCTACCTCGCTGGAAAAGTTAA
CGTTCGGGTTTTTCTTCAATCGACCCATTGTGGGGGTGGCATGGCCTGCC
GCTCTGCAACAGTTGACATTCGGCTATAGGTTCAGCCAGCCCATTGAGGC
GGTGGTATGGCCTACCTCGCTGCAGCAGCTGACGTTCGGAGTGTCATTCA
ATAGTCGTGTTGAGGATGCAACATGGACTGCCTCACTGCAGCAGCTGACA
TTCGGGAGGCAGTTCGATCAAGTCATTGAAGGAGTGATGTGGCCTCCCTC
GCTGCTGCAGTTGACATTCGGGAATTGGTTCAACCGGCCCATTGAGGGCG
TGGCATGGCCCGCTTCGCTGCAACAGTTGATGTTCGGGTTCTCCTTCAAC
CAGCGTATTGAGGGGGTGACGTGGCCGGCCTCGCTGCAGCAGCTGACGTT
CGGGGGGCTTTTCAATCAGCGTATTGAGAAAGTGGTATGGCCTTCCTCTC
TCCAGCAGTTGACGTTTGGGGTGCTCTTCAACCAGCCCATTGCGGAAGCA
GTATGGCCTGCCTCGTTGCAACAATTAACTTTTGGGTAGAGAGTCTATTG
TTACGTTGAGCGGACTCCAACCAACAACCTCTGGTTTATCCTCTGTGTGA
GTCGAGCAGAGCAGTGTTTTGACAGCGACATACTCATATCGAAATAACTT
TTGTCGAACTTACTCTTGAAGATGTTTGGTTCATGCTGCTTGACTGTTGG
GAGAAAGTATGAAGAATTCGAAATGACTTCAAGTAGATCACGAAGCAATC
CCTCTAGCGCACGCTTCAATCGTAGGCAAACATCTACACTTCACATTATC
ATCGGGCGTGTACAAATCAGTTGAGGACAAATGTGTGCTGATACGTAGGA
CGCGGCTCAGCCGTGGGCAAACATGATAACATATGTCCTTAACTCCACGT
ACGCATCACCAGGAATCATTCGTCCTATTATGCGTATCTGGTGGATCATA
GCTGTACCGTCGGATGTGTCTAACAACTGCAAGAACAAGGACAGGACTTT
GAAGGTCATTTCTCGTTTCTGAGGAGGCATCCTCGCAGGATACATGTGGA
AATCCGCAATTGAAAAATATTCCGTTCATCGTATCTCACGGTGAAGCGGG
GACAAGTATTGCTTGACTGTTCTTTATTGGGGGTGGGGCTGCACAGGGAG
ACAGATGTCATGCTTTTTCAAATTTACTGCTGCAGGGTACGAGGAGTGGT
GTTAGTTCATTCTTTTTTTTTAATTTAGCGGAATTTGAACCCGCCCGAAA
CTCACGCTCTTAGTGCCCCAGATAACCCAGTTGATACAATCGGGAGTAGG
GTTCTACATTGTGCGGGATCAGCACACACGATTAAAATCGCTTGCCACTA
CTCCAACCCACTCCAGTGCGGTTGACTTACTATAGTGAACCCATCTCACG
GTAGTGCGGGGATGGCACTATATAGGCATAGAAGATTCCTGTCGACAGCA
GCAGCCTACTGAGCGCAGAAACGTCCTGGCCTTTTTCTTTCCCCCCCCCC
TATGCATAAATGCTGTCGTCACACTTCGGTCCGCT

Coding sequence (CDS) from alignment at H-paniculata_contig12631:2354..5438-

>mRNA_H-paniculata_contig12631.1646.1 ID=mRNA_H-paniculata_contig12631.1646.1|Name=mRNA_H-paniculata_contig12631.1646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2970bp|location=Sequence derived from alignment at H-paniculata_contig12631:2354..5438- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCCCCACTGGGTCGAAAAAGGCGAGAGAGGACTTCTCTGAAGGCGA
GGTGGATAGGAAATTAGATGTTCCCCACTGGGTCGAAAAAGGCGAGAGAG
GACTTCTCTGAAGGCGAGGTGGATAGGAAATTAGGCCACAGCCGGTGTCT
CGATGCCTTCATCATCGTGCTGAACGAGTGTTGTTCTGGTGTAGGGTCTG
GTCTGTCGACCAAGGCCCTGCAGTTGGCAGCCCTCGAGTTGTGCATCGCG
TGCCGCACCTTCAGTACGCTTCATGTGATCGTTAATAGAAACACGCCGCG
ACGACTATGGGCGAGGTCTAGTGAATACCCACTGGCTTCAACGAGTGGCA
ACTCGGGGAGCTACAATGTCGCTCCGACCCGCGTGCCGGTGTTGCGAGCG
CGTGCGGTGACGTGGATGGCTGCTGATGCCGAATTCATGTCTCACTACAA
CTATCAGCTAGCGAACGTGGAATACGTGCGATTTGGCCCCAATTTCAACC
GCAGTCTGGAGGGCGTGGTATGGCCCGGGGGAGTTAGGCGAATCGATTTT
CAAAACTGTTCGAAATTCGACCAGCCCATTGAAAGGGTGGCATGGCCAAC
CTCGCTGCAGCAGTTGACATTCGGGAGCCTGTTCAACCAGCGTCTCGAGG
GAGTGGCATGGCCTGCATCTTTACAGCAGTTGAAATTTGGAACGCTCTTC
AACCAGCGTGTTGACGGGGTGGCATGGCCTGCCTCGCTGCAGCAGTTGAC
GTTCGGCGATGATTTCAACCAGCGTATTGAGGGAGTGGCATGGCCTGCCT
GCCTGCAGAAGTTGACGTTTGGGCATTGGTTTAATCAGTGTGTTCAGAAG
GTGGTATGGCCTGCCTCGCTGCAGCAGCTGACATTCGGGAGAGATTTCGA
CCAGCCTATCGTGGGGGTGGCATGGCCTACCTCGCTACAGCAGCTGACAT
TTGGGAGGCACTTCAAACAGGACATTCAGCGGGTGGCATGGCCTACCTCG
CTGGAAAAGTTAACGTTCGGGTTTTTCTTCAATCGACCCATTGTGGGGGT
GGCATGGCCTGCCGCTCTGCAACAGTTGACATTCGGCTATAGGTTCAGCC
AGCCCATTGAGGCGGTGGTATGGCCTACCTCGCTGCAGCAGCTGACGTTC
GGAGTGTCATTCAATAGTCGTGTTGAGGATGCAACATGGACTGCCTCACT
GCAGCAGCTGACATTCGGGAGGCAGTTCGATCAAGTCATTGAAGGAGTGA
TGTGGCCTCCCTCGCTGCTGCAGTTGACATTCGGGAATTGGTTCAACCGG
CCCATTGAGGGCGTGGCATGGCCCGCTTCGCTGCAACAGTTGATGTTCGG
GTTCTCCTTCAACCAGCGTATTGAGGGGGTGACGTGGCCGGCCTCGCTGC
AGCAGCTGACGTTCGGGGGGCTTTTCAATCAGCGTATTGAGAAAGTGGTA
TGGCCTTCCTCTCTCCAGCAGTTGACGTTTGGGGTGCTCTTCAACCAGCC
CATTGCGGAAGCAGTATGGCCTGCCTCGTTGCAACAATTAACTTTTGGGT
AGGCCACAGCCGGTGTCTCGATGCCTTCATCATCGTGCTGAACGAGTGTT
GTTCTGGTGTAGGGTCTGGTCTGTCGACCAAGGCCCTGCAGTTGGCAGCC
CTCGAGTTGTGCATCGCGTGCCGCACCTTCAGTACGCTTCATGTGATCGT
TAATAGAAACACGCCGCGACGACTATGGGCGAGGTCTAGTGAATACCCAC
TGGCTTCAACGAGTGGCAACTCGGGGAGCTACAATGTCGCTCCGACCCGC
GTGCCGGTGTTGCGAGCGCGTGCGGTGACGTGGATGGCTGCTGATGCCGA
ATTCATGTCTCACTACAACTATCAGCTAGCGAACGTGGAATACGTGCGAT
TTGGCCCCAATTTCAACCGCAGTCTGGAGGGCGTGGTATGGCCCGGGGGA
GTTAGGCGAATCGATTTTCAAAACTGTTCGAAATTCGACCAGCCCATTGA
AAGGGTGGCATGGCCAACCTCGCTGCAGCAGTTGACATTCGGGAGCCTGT
TCAACCAGCGTCTCGAGGGAGTGGCATGGCCTGCATCTTTACAGCAGTTG
AAATTTGGAACGCTCTTCAACCAGCGTGTTGACGGGGTGGCATGGCCTGC
CTCGCTGCAGCAGTTGACGTTCGGCGATGATTTCAACCAGCGTATTGAGG
GAGTGGCATGGCCTGCCTGCCTGCAGAAGTTGACGTTTGGGCATTGGTTT
AATCAGTGTGTTCAGAAGGTGGTATGGCCTGCCTCGCTGCAGCAGCTGAC
ATTCGGGAGAGATTTCGACCAGCCTATCGTGGGGGTGGCATGGCCTACCT
CGCTACAGCAGCTGACATTTGGGAGGCACTTCAAACAGGACATTCAGCGG
GTGGCATGGCCTACCTCGCTGGAAAAGTTAACGTTCGGGTTTTTCTTCAA
TCGACCCATTGTGGGGGTGGCATGGCCTGCCGCTCTGCAACAGTTGACAT
TCGGCTATAGGTTCAGCCAGCCCATTGAGGCGGTGGTATGGCCTACCTCG
CTGCAGCAGCTGACGTTCGGAGTGTCATTCAATAGTCGTGTTGAGGATGC
AACATGGACTGCCTCACTGCAGCAGCTGACATTCGGGAGGCAGTTCGATC
AAGTCATTGAAGGAGTGATGTGGCCTCCCTCGCTGCTGCAGTTGACATTC
GGGAATTGGTTCAACCGGCCCATTGAGGGCGTGGCATGGCCCGCTTCGCT
GCAACAGTTGATGTTCGGGTTCTCCTTCAACCAGCGTATTGAGGGGGTGA
CGTGGCCGGCCTCGCTGCAGCAGCTGACGTTCGGGGGGCTTTTCAATCAG
CGTATTGAGAAAGTGGTATGGCCTTCCTCTCTCCAGCAGTTGACGTTTGG
GGTGCTCTTCAACCAGCCCATTGCGGAAGCAGTATGGCCTGCCTCGTTGC
AACAATTAACTTTTGGGTAG