mRNA_H-paniculata_contig12551.1606.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: A0A1X7UZ54_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UZ54_AMPQE) HSP 1 Score: 149 bits (375), Expect = 2.570e-41 Identity = 78/200 (39.00%), Postives = 117/200 (58.50%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVA----AERRRYI-------------LGIFEDNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLRNL 549 TRPDIT+AV AAR +P + + KR+FRYL + G+ F K N + GF DADW DV D S +GY+F++ G A++W +KQ V S+ EAEYVA A+ ++ + I+EDN+SAI+++K H R +HI + + IRD V++ ++ L Y +T + AD+LTK L R+KF++ R + Sbjct: 46 TRPDITFAVGLAARFSSNPTSQHLTAVKRIFRYLRKTTNYGLLFR-KRNSKSITGFSDADWGGDVTDCKSTSGYIFQIGGTAVTWQSKKQSCVALSTAEAEYVALSSAAQEATWLKQLNQDLQGSTDPIVIYEDNQSAISIAKNPQFHGRVKHINIKYHFIRDQVRDNIIKLVYCETSEMIADMLTKALGRIKFEKFREM 244
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F) HSP 1 Score: 148 bits (373), Expect = 2.980e-40 Identity = 84/202 (41.58%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVAAE----RRRYILGIFE--------------DNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLRNLL 552 TRPDI YAV +R ME P + KR+ RY+ D G+ F + +G G G+ D+D+A D+ DR S +G++F LN GAISW +KQQ VT SSTEAEYVAA + ++ IFE DN S I LS+ H R++HI V + +RD + + L+Y ++G+Q ADILTK L + F++LR++L Sbjct: 113 TRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLRKIFEVLGNVQKGPTTIYCDNISTIKLSRNPVMHGRSKHIDVRFHFLRDLCSDEKIVLEYCKSGEQVADILTKPLKQPAFEKLRSML 313
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 146 bits (369), Expect = 3.880e-40 Identity = 88/214 (41.12%), Postives = 114/214 (53.27%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNG---HGLE--GFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVAA-------------------------ERRRYILGIFEDNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLRNLL 552 +RPDI +AV ++ P E ++ R+FRYL + +T+ HGL G+ DADWA D DR S + YVFKL GGAISWC RKQQ + SSTEAEYVA R + I DN+SA+ L+K +S H RT+HI V IRD ++ G L ++Y+ TGDQ AD+LTK L+R K NLL Sbjct: 68 SRPDIAFAVGTLSKHASTPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTKSLAREKHTYFTNLL 281
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 152 bits (385), Expect = 1.820e-39 Identity = 85/197 (43.15%), Postives = 111/197 (56.35%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVAAERR-------RYILG-----------IFEDNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQR 537 TRPDI YAV ++ P E ++ R F+YL D + ++GK L G+VD+DWA D DR SI+GYVF L G AISW +KQQ V SSTEAEY+AA R +L + DN+ AI L+K + H T+HI V +RD V++G +A +Y+ T DQ AD+LTKGLSR K R Sbjct: 1201 TRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSREKHDR 1397
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F) HSP 1 Score: 142 bits (358), Expect = 6.630e-39 Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVA-------AERRRYILG-----------IFEDNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLRNL 549 TRPDI +AV A DP ++ ++ KR+ RYLN +G+ +S K+ G+ DADWA D+ DR S++GY+FK++G A+SW +KQ V S+ EAEY+A A R +L I+EDN+SAI +++ H R +HI + IRD V G + L+ +T D AD+LTKGL++VKF +LR + Sbjct: 41 TRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLYS-KNTEKECIGYSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGLTQVKFIKLREM 240
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: A0A4Y1RBF6_PRUDU (ADP glucose pyrophosphorylase large subunit 1 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RBF6_PRUDU) HSP 1 Score: 150 bits (378), Expect = 1.490e-38 Identity = 85/202 (42.08%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVAAE----RRRYILGIFE--------------DNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLRNLL 552 TRPDI YAV +R ME P + KR+ RY+ D G+ F + +G G G+ D+D+A D+ DR S +G+ F LN GAISW +KQQ VT SSTEAEYVAA + ++ IFE DN S I LS+ H R++HI V + +RD +G + L+Y ++G+Q ADILTK L + F++LR++L Sbjct: 706 TRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHTFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLKKIFEVLGDVQKGPTTIYCDNISTIKLSRNPVMHGRSKHIDVRFHFLRDLCSDGKIVLEYCKSGEQVADILTKPLKQPAFEKLRSML 906
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: A0A4Y1R4M3_PRUDU (ADP glucose pyrophosphorylase large subunit 1 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R4M3_PRUDU) HSP 1 Score: 150 bits (378), Expect = 1.590e-38 Identity = 85/202 (42.08%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVAAE----RRRYILGIFE--------------DNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLRNLL 552 TRPDI YAV +R ME P + KR+ RY+ D G+ F + +G G G+ D+D+A D+ DR S +G+ F LN GAISW +KQQ VT SSTEAEYVAA + ++ IFE DN S I LS+ H R++HI V + +RD +G + L+Y ++G+Q ADILTK L + F++LR++L Sbjct: 1148 TRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHTFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLKKIFEVLGDVKKGPTTIYCDNISTIKLSRNPVMHGRSKHIDVRFHFLRDLCSDGKIVLEYCKSGEQVADILTKPLKQPAFEKLRSML 1348
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 147 bits (372), Expect = 1.810e-38 Identity = 82/202 (40.59%), Postives = 116/202 (57.43%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVAAERR-------RYILG-----------IFEDNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLRNLL 552 TRPD++YAV ++ M++P + KR+ RYL + +T+ G N +G+EGF DADW R SI+GYVF ++GGA+SW +KQ V SSTEAEYVA R LG ++ DN+SAI L+K H RT+HI + + IRD V+ G + + Y T D AD+LTK L+R K +++R L+ Sbjct: 344 TRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEKMRGLI 543
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 144 bits (363), Expect = 2.420e-38 Identity = 85/199 (42.71%), Postives = 114/199 (57.29%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVAAERR-------RYILG-----------IFEDNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLR 543 TRPD+ Y+V+ +R ME+P + KR+ RY+ GI + + G L GFVD+D+A DV DR S +GYVF L GGA+SW +KQ VT S+TEAE+VAA R ILG +F DN S I LSK H R++HI V + +RD V E V+ L++ T DQ +DI+TK + F+RLR Sbjct: 169 TRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERLR 366
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Match: A0A151SR20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SR20_CAJCA) HSP 1 Score: 142 bits (358), Expect = 2.840e-38 Identity = 88/202 (43.56%), Postives = 114/202 (56.44%), Query Frame = 1 Query: 1 TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGHGLEGFVDADWAEDVKDRNSITGYVFKLNGGAISWCPRKQQFVTWSSTEAEYVAA---------------ERRRYILG---IFEDNKSAINLSKGTSAHCRTQHIGVCWRGIRDGVQEGVLALQYMQTGDQRADILTKGLSRVKFQRLRNLL 552 TRPDI YAV +R ME P KR+FRYL D+G+ F K NG L GF D+++A D+ DR S +G+VF + GAISW +KQQ VT S+TEAE++AA E Y G I DN S I LS+ H R++HI V + +RD V E ++ L Y ++ DQ ADILTK L F++LR LL Sbjct: 96 TRPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDLGV-FYKKINGSILTGFTDSNYAGDMDDRRSTSGHVFMIGSGAISWASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEELHFYQQGPTVIHCDNSSTIKLSRNPILHGRSKHIDVRYHFLRDLVIEKIIDLVYCRSEDQVADILTKPLKLEAFEKLRGLL 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12551.1606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12551.1606.1 >prot_H-paniculata_contig12551.1606.1 ID=prot_H-paniculata_contig12551.1606.1|Name=mRNA_H-paniculata_contig12551.1606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp TRPDITYAVHQAARRMEDPYREDFSTCKRLFRYLNTVPDVGITFSGKSNGback to top mRNA from alignment at H-paniculata_contig12551:7008..7610- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12551.1606.1 ID=mRNA_H-paniculata_contig12551.1606.1|Name=mRNA_H-paniculata_contig12551.1606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=603bp|location=Sequence derived from alignment at H-paniculata_contig12551:7008..7610- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12551:7008..7610- >mRNA_H-paniculata_contig12551.1606.1 ID=mRNA_H-paniculata_contig12551.1606.1|Name=mRNA_H-paniculata_contig12551.1606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1116bp|location=Sequence derived from alignment at H-paniculata_contig12551:7008..7610- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |