mRNA_H-paniculata_contig1253.1592.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1253.1592.1
Unique NamemRNA_H-paniculata_contig1253.1592.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: D8LBG9_ECTSI (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBG9_ECTSI)

HSP 1 Score: 663 bits (1710), Expect = 1.560e-232
Identity = 339/486 (69.75%), Postives = 393/486 (80.86%), Query Frame = 1 
Query:  247 GNILRICVVGSGPAGFYVTKYLLKE-AELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVEGVPYDDLNSVIKNEGGRVAGTVGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPNDNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVRIVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIA 1701
            G  LR+CVVGSGPAGFYVTKYLLKE AELGCE+ +D++D LPTP+GLVRFGVAPDHPEVKAVQ DF+QVASD R+ FFGNV  G+DVSAAQLS LYDVVVLAYGAAGDR L VPGADL+GVF+ARAFV+WYNGHPDFAH+S EF  ALASSDTV VVGVGNVALDCARIL KGA+AL+ +DIC+H +DVL S G+ LRRV++LGRRGHVQASFT+KELRELTKLDGV C+V+ +ELE+ RTPASLD LK  R K RIDALLTKVA+GS  VSA  K+VE RFL+G  +V+P+N   +RVG++RV RN+LEL+  TG++RA+  S   EV+ CGMVLGSIGY CLPV GVPYD+ NS+I NE GRV G  GMYCSGWARRGPSGIIGTNITDARSVVAAIV+D+S  +L   D AE RQGL  ML   Q      R  GG     K V++V+WDGY+ I+R E+A G  KGKPREK V + +ML IA
Sbjct:   54 GRPLRVCVVGSGPAGFYVTKYLLKEEAELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGAAGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHMSEEFAKALASSDTVAVVGVGNVALDCARILAKGANALKGSDICDHALDVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPASLDELKTARPKNRIDALLTKVADGSDSVSAEAKAVEFRFLVGLSDVLPNNSIPNRVGAVRVERNQLELDEATGAQRAIG-SGVKEVIECGMVLGSIGYRCLPVHGVPYDERNSIIANERGRVQGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAESRQGLRNMLMGGQDGAPGLRGSGG---TKKKVQVVDWDGYQRINRDEVARGAMKGKPREKFVHVEEMLSIA 535
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: A0A835ZC91_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC91_9STRA)

HSP 1 Score: 452 bits (1164), Expect = 8.560e-150
Identity = 261/505 (51.68%), Postives = 318/505 (62.97%), Query Frame = 1 
Query:  256 LRICVVGSGPAGFYVTKYLLKEAELGCE-IAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLD-------GVTCVVKYDELEMGRT--PASLDILKATRAKTRIDALLTKVAEGSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRL-ELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVEGVPYDDLNSVIKNEGG----RVAGTVGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRL--------VPNDNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVRIVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIA 1701
            LR+CVVGSGPAGFY TKYLLKE  L    I +D++D LPTP+GLVR GVAPDHPEVKA Q DFEQVASDPR+ FFGNV +G DVS AQL  LY  VV+A+GA GDR+L VPG DL GV +ARAFVNWYNGHPD A L     AAL  SDT VV+GVGNVALDCARIL KGADALRSTDI  H ++ L +   K  R++V GRRG  QASFTIKELRELT+++       GV C V+ DEL +     P   D     RAK RI ALL  VAE SK+    ++ V+LRFLL P  ++PS     RVG+I + R  L   + G+G+ RA      TE + CG+VL SIGY  LP++ +PYD   + +   GG    RV    G YC+GWARRGPSGIIGTNI DA+   AA+ +D + G L        V +  +                  A RT+  +      V +V+W GY+ ID  E A G +  KPREK+V + +ML +A
Sbjct:   54 LRVCVVGSGPAGFYTTKYLLKEQGLSDRGITIDIVDRLPTPYGLVRSGVAPDHPEVKAAQNDFEQVASDPRVSFFGNVTVGSDVSVAQLRELYHAVVIAHGAGGDRSLGVPGEDLDGVLTARAFVNWYNGHPDCADLGPRIAAALRHSDTAVVIGVGNVALDCARILAKGADALRSTDIAAHALEALSAAAPK--RIVVAGRRGAAQASFTIKELRELTRIELSLSAAQGVACAVREDELRLSDAAPPPPQD-----RAKQRIMALLGAVAEASKVPPPHSREVQLRFLLSPRRMVPSPADPARVGAIEMERTALVAADDGSGAVRAKGTGV-TETIDCGLVLTSIGYRTLPLDDLPYDARRATVACAGGGASPRVENAPGTYCAGWARRGPSGIIGTNILDAKFAAAALAEDAASGALPGAAEARWVISVRSXXXXXXXXXXXXXXXXGRAVRTQALLSD--SAVAVVDWTGYQRIDAAERARGAAASKPREKVVRVAEMLSLA 548
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: A0A2P4Y0T8_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0T8_9STRA)

HSP 1 Score: 434 bits (1116), Expect = 3.100e-143
Identity = 247/518 (47.68%), Postives = 327/518 (63.13%), Query Frame = 1 
Query:  196 QDTLQWRKGGAANAGGEGNILRICVVGSGPAGFYVTKYLLKEAELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGT--KSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVEG-VPYDDLNSVIKNEGGRVAGT---------VGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPNDNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVRIVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIADKEN 1713
            Q  L  R   + ++  E  + R+CVVGSGPAGFY TKYLLKE   G    VD+L+ LPTPFGLVR GVAPDHPEVK+V  DF++VA+D R  F GNVR+G+DVS A+L   Y  VVLAYGAAGDR L VPG +L+GV SAR FVNWYNGHP F  L  +    L  ++T VV+G GNVA+DCARIL K  D L +TDI  H ++VL  +G  +++V ++GRRG  QA+FT+KE+RELTKLDGV CVV  D+LE  +TPAS   +K  RA+ R++ LL K A+  +  SAG   + V+++FL  P+E+I     S RVG IRV + +LE  P    +RAV   E  E +PC +VL SIGY  LP+E   P+D+   V+ N+ GRV  T         VG+YC+GW +RGPSGIIGTNI DAR  V  IV+D + G  + ++++           +++  +G    E  +       ++V W  Y+ ++  E   G   GKPREK+  + +MLEIA   N
Sbjct:   15 QRALGVRLARSFSSASESPLRRVCVVGSGPAGFYATKYLLKE-HAGAR--VDMLEALPTPFGLVRSGVAPDHPEVKSVMNDFDKVAADERFRFLGNVRVGEDVSLAELQQHYHAVVLAYGAAGDRKLGVPGEELRGVLSARTFVNWYNGHPAFRDLELD----LKQAETAVVIGQGNVAVDCARILTKNVDELATTDIASHAVEVLRKSG--IKKVFLVGRRGSAQAAFTMKEIRELTKLDGVVCVVDPDDLERSKTPASEQEIKEQRARKRMNDLLIKAAD--QFASAGDTKRVVQIKFLSSPVEIIADVKDSTRVGGIRVEKTKLEGEPN--QQRAVGTGE-FEDIPCNLVLRSIGYKSLPIEANAPFDNCRHVVSNDHGRVVTTLSSGEKQTVVGLYCTGWVKRGPSGIIGTNIVDARETVNCIVEDFAAGNYLHSESS-----------TDEDLDGLKAVEKLIKKRNPDKQLVRWADYERLNAEENRRGELVGKPREKVTSVTEMLEIAKSAN 507
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: D0N252_PHYIT (NADPH:adrenodoxin oxidoreductase, mitochondrial n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N252_PHYIT)

HSP 1 Score: 433 bits (1113), Expect = 1.340e-142
Identity = 236/502 (47.01%), Postives = 321/502 (63.94%), Query Frame = 1 
Query:  259 RICVVGSGPAGFYVTKYLLKEAELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVE-GVPYDDLNSVIKNEGGRVAGT---------VGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPNDNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVR-------IVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIADKEN 1713
            R+CVVGSGP GFY TKYLLKE      + VD+L+ LPTPFGLVR GVAPDHPEVK+V +DFE+VA++ R  F GNVR+G+D+S A+L   Y  VVLAYGAAGDR L VPG  L+GV S+R FVNWYNGHP F  L  +    LA ++T VV+G GNVA+DCARIL+K  D L STDI  H M+VL +TG  ++RV ++GRRG  QA+FT+KE+RELTKL+GV C+V  ++++   T AS   +K  RA+ R++ LL K A+  + V  G + V+++FL  P E++       RVG++RV + RLE   G  +++    + E E +PC +VL S+GY  LP+E   P+D+   V+ N+ GRV  T         VG+YC+GW +RGPSGIIGTNI DAR  V+ IV+D++ G  + +DN                   A    GG++++ + V+       +V+W  Y+ ++  E   G   GKPREK+  I +MLEIA   N
Sbjct:   49 RVCVVGSGPGGFYATKYLLKEHA---GVRVDMLEALPTPFGLVRSGVAPDHPEVKSVMSDFEKVANNERFRFLGNVRVGEDISLAELQRHYHAVVLAYGAAGDRKLGVPGESLRGVMSSRTFVNWYNGHPAFRDLELD----LAHAETAVVIGQGNVAVDCARILLKNVDQLASTDITAHAMEVLRNTG--IKRVFLVGRRGSAQAAFTMKEIRELTKLEGVACIVDPEDMKRSMTNASEQEIKEQRARKRMNELLIKAADNFESVGDGKRIVQIKFLRSPTEILADEKDPTRVGALRVEKTRLE---GEANQQRAVGTGEFEDIPCDLVLRSVGYKSLPIETDAPFDNHRHVVSNDQGRVVTTSSNGEKRPVVGLYCTGWVKRGPSGIIGTNIVDARETVSCIVEDLAAGHFLHSDN------------------NADEDLGGLEAVTQLVKKRNPDKQLVSWAEYERLNAEENRRGELVGKPREKVTSITEMLEIAKSVN 520
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: A0A662XRD0_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRD0_9STRA)

HSP 1 Score: 428 bits (1100), Expect = 9.600e-141
Identity = 236/500 (47.20%), Postives = 314/500 (62.80%), Query Frame = 1 
Query:  259 RICVVGSGPAGFYVTKYLLKEAELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAE--GSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVEG-VPYDDLNSVIKNEGGRVAGT----------VGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPNDNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVR-------IVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEI 1698
            R+CVVGSGPAGFY TKYLLKE      + VD+L+ LPTPFGLVR GVAPDHPEVK+V  DFE+VA+D R  F GNVR+G+DV  A+LS  Y  VVLAYGAA DR L VPG DL GV SAR FVNWYNGHP F  L  +    L  + T V++G GNVA+DCAR+L K  D L +TD+  H ++VL   GS +++VL++GRRG  QA+FT+KE+RELTKLDGV CVV  D+L+   TP+S   +K  R + R++ LL+K  E  GS   S  T+ V+++FL  P+E++P      RVG IR+ + RLE   G  +++    + E E +PC +VL SIGY  LP+E   P+D    V+ NE GRV  T          VG YC+GW +RGPSGI+GTNI DAR  V+ I+ D +EG+ + ++                  EG  +  GG++++ K ++       +V WD Y+ +   E   G   GKPREK+  + +ML +
Sbjct:   40 RVCVVGSGPAGFYATKYLLKEHA---GVRVDMLEALPTPFGLVRSGVAPDHPEVKSVMNDFEKVAADERFRFLGNVRVGEDVRLAELSEHYHAVVLAYGAAADRELGVPGEDLHGVLSARTFVNWYNGHPAFRDLEID----LQKAKTAVIIGQGNVAVDCARVLTKSVDDLATTDMSTHAVEVLR--GSGIKKVLLVGRRGSAQAAFTMKEIRELTKLDGVACVVDPDDLKRSMTPSSEQEIKEQRPRKRMNELLSKATEQFGSP-ASDDTRVVQIKFLSSPVEIVPDPNDPTRVGGIRLEKTRLE---GEANQQRAVGTGEFEEIPCNLVLRSIGYKSLPIEADTPFDPRRHVVANEQGRVVATSSNDDELQPVVGFYCTGWVKRGPSGIVGTNIVDARETVSCILGDFAEGKFLHSE------------------EGDDKDLGGLEAVEKLIKDRDPTKQLVTWDDYQRLSTEESRRGELLGKPREKITSVPEMLAV 508
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: A0A421G4V8_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G4V8_9STRA)

HSP 1 Score: 427 bits (1097), Expect = 3.630e-140
Identity = 235/494 (47.57%), Postives = 310/494 (62.75%), Query Frame = 1 
Query:  256 LRICVVGSGPAGFYVTKYLLKEAELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVEG-VPYDDLNSVIKNEGGRVAGT---------VGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPN--DNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVRIVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIA 1701
            LR+CVVGSGP GFY TKYLLKE      + VD+L+ LPTPFGLVR GVAPDHPEVK+V  DF +VA+D R  F GNVR+G+DV  A L   Y  VVLAYGAAGDR L VPG DL+GV SAR FVNWYNGHP F  L  +    L   +T VV+G GNVA+DCARIL K  D L STDI  H++ VL  +G K  +VL++GRRG  QA+FT+KE+RELTKLDGV C+V  ++++  +TP+S   +K  RA+ R++ LL+K AE     S   + V+++FL  P E++     + RVG+IR+ +  LE  P    +RAV   E  E +PC +VL SIGY  LP+E   P+D    V+ NE GRV  T         VG+YC+GWA+RGPSGIIGTNI DAR  V+ IV+D + G+ +    +N  G + + +++      +                ++V W  Y+ ++  E   G   GKPREK+  + +ML +A
Sbjct:   53 LRVCVVGSGPGGFYATKYLLKEHT---GVRVDMLEALPTPFGLVRSGVAPDHPEVKSVMNDFAKVAADERFRFLGNVRVGEDVRLADLQQHYHAVVLAYGAAGDRELGVPGEDLRGVMSARTFVNWYNGHPAFRDLDLD----LQDVETAVVIGQGNVAVDCARILTKNVDELASTDIATHSVKVLRRSGVK--KVLLVGRRGSAQAAFTMKEIRELTKLDGVACIVDPEDMKRSKTPSSELEIKEQRARKRMNDLLSKAAEQFDTTSDAERVVQIKFLSSPAEILADEKDATRVGAIRIEKTSLEGEPN--QQRAVGTGE-FEDIPCSLVLRSIGYKSLPIEADAPFDQRRHVVSNEQGRVVATSESGETEPVVGLYCTGWAKRGPSGIIGTNIVDARETVSCIVEDFASGKFLHTNEENLAGLEAVEKLIKKRNPDK----------------QLVRWTDYERLNSEENRRGELVGKPREKITSVAEMLAVA 518
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: A0A6A4A882_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A882_9STRA)

HSP 1 Score: 426 bits (1095), Expect = 4.050e-140
Identity = 236/502 (47.01%), Postives = 313/502 (62.35%), Query Frame = 1 
Query:  259 RICVVGSGPAGFYVTKYLLKEAELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVE-GVPYDDLNSVIKNEGGRVAGT---------VGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPNDNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVR-------IVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIADKEN 1713
            R+CVVGSGP+GFY +KYLLKE        VD+L+ LPTPFGLVR GVAPDHPEVK+V  DF +VA+D R  F GNVR+G+DV+  +L   Y  VVLAYG AGDR L VPG  L+GV SA +FVNWYNGHP F  L  +    L  +DT VV+G GNVA+DCARIL K  D L +TDI  H ++VL ++G K  +V ++GRRG  QA+FT+KE+RELTKL+GV C+V  ++++   TPAS   +K  RA+ R++ LL K AE  + V    + V+++FL  P E++       RVG+IRV + +LE  P    +RAV   E  E +PC +VL SIGY  LP+E GVP+D    V+ NE GRV  T         VG+YC+GW +RGPSGIIGTNI DAR  V +IV+D + G  + +D                   GA    GG++++ K ++       +V W  Y+ ++  E   G   GKPREK+  + +ML +A K N
Sbjct:   33 RVCVVGSGPSGFYASKYLLKEHS---GARVDMLEALPTPFGLVRSGVAPDHPEVKSVMNDFNKVAADSRFRFLGNVRVGEDVTLTELQRHYHAVVLAYGTAGDRELGVPGEQLRGVMSASSFVNWYNGHPAFRDLELD----LQHADTAVVIGQGNVAVDCARILTKDVDELVTTDITAHAVEVLRNSGVK--KVFLVGRRGSAQAAFTMKEIRELTKLNGVACIVDPEDMKRSLTPASEQEIKEQRARKRMNDLLAKAAEQFESVDDAKRVVQIKFLSSPAEILADENDPTRVGAIRVEKTKLEGEPN--QQRAVGTGE-FEDIPCNLVLRSIGYKSLPIEAGVPFDSRRHVVSNEQGRVVKTSDSGEKQPVVGLYCTGWVKRGPSGIIGTNIVDARETVGSIVEDFAAGNFLHSD------------------AGAGEDLGGLEAVEKLIKKRNPDKQLVRWADYERLNAEENRRGELVGKPREKVTSVAEMLAVAKKTN 504
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: A0A225WQD2_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQD2_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 5.040e-139
Identity = 234/504 (46.43%), Postives = 315/504 (62.50%), Query Frame = 1 
Query:  253 ILRICVVGSGPAGFYVTKYLLKEAELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVEG-VPYDDLNSVIKNEGGRVAGT---------VGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPNDNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVR-------IVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIADKEN 1713
            + R+CVVGSGPAGFY +KYLLKE   G    VD+L+ LPTPFGLVR GVAPDHPEVK+V  DF++VA+D R  F GNVR+G DV+ A+L   Y  VVLAYGAAGDR L VPG DL+GV SA  FVNWYNGHP F  L+ +    L  ++T VV+G GNVA+DCAR+L K  D L +TDI  H ++VL S+G  +R+V V+GRRG  QA+FT+KE+RELTKLDGV CVV  ++LE  +  AS   +K  R + R++ LL K A+         + V+++FL  P+E+I       +VG+IR+ + +LE   G  + +    + E E +PC +VL SIGY  LP+E  VP+D    VI N+ GRV  T         VG+YC+GW +RGPSGIIGTNI DAR  V+ IV+D + G  + ++++                  A    GG++++ K ++       +V W  Y+ ++  E   G   GKPREK+  + +MLEIA   N
Sbjct:   34 LRRVCVVGSGPAGFYASKYLLKE-HAGAR--VDMLEALPTPFGLVRSGVAPDHPEVKSVMNDFDKVAADERFRFLGNVRVGDDVTLAELQQHYHAVVLAYGAAGDRTLGVPGEDLRGVLSACTFVNWYNGHPAFRDLALD----LKQTETAVVIGQGNVAVDCARVLTKNVDELATTDIATHAVEVLRSSG--VRKVFVVGRRGSAQAAFTMKEIRELTKLDGVVCVVDPEDLERSKNSASEQEIKEQRPRKRMNDLLVKAADQFSSAGDAKRVVQIKFLSSPVEIIADQKDPTQVGAIRIEKTKLE---GEANRQRAVGTGEFEDIPCNLVLRSIGYKSLPIEADVPFDTRRHVISNDQGRVVTTSSSGEKESVVGLYCTGWVKRGPSGIIGTNIVDARETVSCIVEDFAAGNYLHHESS------------------ADEDLGGLEAVEKLIKKRNPDKQLVRWADYERLNAEENRRGALVGKPREKVTSVTEMLEIAKSAN 507
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: M4BMB9_HYAAE (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMB9_HYAAE)

HSP 1 Score: 422 bits (1085), Expect = 1.780e-138
Identity = 236/524 (45.04%), Postives = 317/524 (60.50%), Query Frame = 1 
Query:  187 RQRQDTLQWRKGGAANAGGEGNILRICVVGSGPAGFYVTKYLLKEAELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVE-GVPYDDLNSVIKNEGGRVAGT---------VGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPND----NAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVRIVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIADKENK 1716
            RQR  + +  +G + +   +  + R+CVVGSGPAGFYVTKYLLK+      + V++L+ LPTPFGLVR GVAPDHPEVK+V  DFE VA D R  F GNV +G+DV+ A+L   Y  V+LAYGAA DR L +PG  LKGV SARAFVNWYNGHP F  L+ +    L  ++T V++G GNVA+DCAR+L K  D L  TDI  H + VL +  S +++V V+GRRG  QA+FT+KE+RELTKLDGV CVV  D+L+   TPAS   ++  RA+ R++ LL++ AE  +      + V+L+FL  P E+I       RVG+IR+ + +LE  P         V E+   +PC +VL SIGY  LP+E G+P+D    VI NE GRV  T         VG+YC+GW +RGP+GIIG+NI DAR  V  I++D + G  + +D    N  G    + ML  ++  +                ++V W  Y  I   E   G + GKPREK+  + +ML IA    K
Sbjct:   12 RQRVSSARQVRGFSLHVSSDAPLRRVCVVGSGPAGFYVTKYLLKQHR---GVRVNMLEALPTPFGLVRSGVAPDHPEVKSVMNDFELVAGDDRFGFLGNVCVGKDVTLAELQRYYHAVILAYGAAEDRELGIPGEQLKGVLSARAFVNWYNGHPAFRGLTPD----LKRTETAVIIGQGNVAVDCARLLTKNVDELARTDIAAHAVQVLRN--SSIQKVFVVGRRGSAQAAFTMKEIRELTKLDGVACVVDPDDLKRSFTPASEQEIQDQRARKRMEELLSRAAEQFECTQNAKRVVQLKFLSSPAEIIADENDPTRVGAIRLEKTKLEGKPNRQRAVGTGVYED---IPCSLVLRSIGYKSLPIEAGIPFDTRRHVISNERGRVVSTLSSGEKKSMVGLYCTGWVKRGPAGIIGSNIVDARETVGCIMEDFAAGNFLHSDGNAGNDLGEVEAVEMLVKKRYPD---------------KQLVKWADYVRISAEETLRGQAVGKPREKITSVTEMLAIAKSATK 508
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BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Match: H3GA48_PHYRM (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA48_PHYRM)

HSP 1 Score: 421 bits (1083), Expect = 2.270e-138
Identity = 238/498 (47.79%), Postives = 308/498 (61.85%), Query Frame = 1 
Query:  259 RICVVGSGPAGFYVTKYLLKEAELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLHFFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARAFVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADALRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDGVTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGTKSVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEETEVVPCGMVLGSIGYLCLPVE-GVPYDDLNSVIKNEGGRVAGT---------VGMYCSGWARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPNDNAEGRQGLIRMLASEQTSEGASRTEGGMDSIPKPVR-------IVNWDGYKGIDRHELASGGSKGKPREKLVDIGQMLEIA 1701
            R+CVVGSGPAGFY TKYLLKE        VD+L+ LPTPFGLVR GVAPDHPEVK+V  DF++VA+D R  F GNVR+G+DV+ A+L   Y  VVLAYGAAGDR L V G  L GV SAR+FVNWYNGHP F  L  +    L  ++T VVVG GNVA+DCARIL K AD L +TDI  H ++ L ++G K  +V ++GRRG  QA+FT+KE+RELTKLDGV C+V  ++L+   TP S   +K  RA+ R+  LL K AE         + V+++FL  P E++       RVG+IRV + +LE  P    +RAV   E  E +PC +VL SIGY  LP+E  VP+DD   V+ NE GRV  T         VG+YC+GW +RGPSGIIGTNI DAR  V+ IV+D + G  + +D + G                     GG++++ K ++       +V W  Y+ +   E   G   GKPREK+  + +ML IA
Sbjct:   30 RVCVVGSGPAGFYATKYLLKEHS---GARVDMLEALPTPFGLVRSGVAPDHPEVKSVMNDFDKVAADERFRFLGNVRVGEDVTLAELQQHYHAVVLAYGAAGDRELGVQGEHLHGVMSARSFVNWYNGHPAFRDLQLD----LQHAETAVVVGQGNVAVDCARILSKNADELATTDIATHAVEALRNSGVK--KVFLVGRRGSAQAAFTMKEIRELTKLDGVACIVDPEDLKRSMTPNSEQEIKEQRARKRMSDLLGKAAERFAGTIDAERVVQIKFLSSPAEILADEKDPTRVGAIRVEKTKLEGEPN--QQRAVGTGE-FEDIPCNLVLRSIGYKSLPIEVNVPFDDRRHVVSNEQGRVVATSVSGEKQPVVGLYCTGWVKRGPSGIIGTNILDARETVSCIVEDFAAGNFLHSDKSYGED------------------LGGLETVEKLIKKRNPEKQLVRWADYERLSAEESRRGELLGKPREKVTSVAEMLSIA 497
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1253.1592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBG9_ECTSI1.560e-23269.75NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A835ZC91_9STRA8.560e-15051.68NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A2P4Y0T8_9STRA3.100e-14347.68NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
D0N252_PHYIT1.340e-14247.01NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A662XRD0_9STRA9.600e-14147.20NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A421G4V8_9STRA3.630e-14047.57NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A6A4A882_9STRA4.050e-14047.01NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A225WQD2_9STRA5.040e-13946.43NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
M4BMB9_HYAAE1.780e-13845.04NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
H3GA48_PHYRM2.270e-13847.79NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1253contigH-paniculata_contig1253:12840..18572 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score669.5
Seed ortholog evalue1.4e-189
Seed eggNOG ortholog2880.D8LBG9
Preferred nameARH1
KEGG koko:K18914
Hectar predicted targeting categorymitochondrion
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004324,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005886,GO:0006091,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006790,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008860,GO:0009058,GO:0009108,GO:0009987,GO:0015039,GO:0015980,GO:0016020,GO:0016043,GO:0016226,GO:0016491,GO:0016730,GO:0016731,GO:0019725,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030003,GO:0031090,GO:0031163,GO:0031966,GO:0031967,GO:0031975,GO:0036094,GO:0042180,GO:0042181,GO:0042592,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044571,GO:0045333,GO:0046916,GO:0048037,GO:0048878,GO:0050660,GO:0050662,GO:0050801,GO:0051186,GO:0051188,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0071944,GO:0071949,GO:0097159,GO:0098771,GO:1901265,GO:1901363,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.NADPH-adrenodoxin reductase activity
EggNOG OGsCOG0493@1,KOG1800@2759
Ec32 ortholog descriptionPyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Ec32 orthologEc-27_004010.1
EC1.18.1.6
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Exons10
Model size1849
Cds size1704
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1253.1592.1prot_H-paniculata_contig1253.1592.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1253 12861..18448 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928973.8640914-UTR-H-paniculata_contig1253:12839..128601622928973.8640914-UTR-H-paniculata_contig1253:12839..12860Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1253 12840..12860 +
1691480687.6726563-UTR-H-paniculata_contig1253:12839..128601691480687.6726563-UTR-H-paniculata_contig1253:12839..12860Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1253 12840..12860 +
1622928974.9694912-UTR-H-paniculata_contig1253:18448..185721622928974.9694912-UTR-H-paniculata_contig1253:18448..18572Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1253 18449..18572 +
1691480687.7805986-UTR-H-paniculata_contig1253:18448..185721691480687.7805986-UTR-H-paniculata_contig1253:18448..18572Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1253 18449..18572 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928973.8732388-CDS-H-paniculata_contig1253:12860..131571622928973.8732388-CDS-H-paniculata_contig1253:12860..13157Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 12861..13157 +
1691480687.6936502-CDS-H-paniculata_contig1253:12860..131571691480687.6936502-CDS-H-paniculata_contig1253:12860..13157Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 12861..13157 +
1622928973.8831432-CDS-H-paniculata_contig1253:13484..136131622928973.8831432-CDS-H-paniculata_contig1253:13484..13613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 13485..13613 +
1691480687.7037184-CDS-H-paniculata_contig1253:13484..136131691480687.7037184-CDS-H-paniculata_contig1253:13484..13613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 13485..13613 +
1622928973.8940048-CDS-H-paniculata_contig1253:15118..153031622928973.8940048-CDS-H-paniculata_contig1253:15118..15303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 15119..15303 +
1691480687.7137141-CDS-H-paniculata_contig1253:15118..153031691480687.7137141-CDS-H-paniculata_contig1253:15118..15303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 15119..15303 +
1622928973.9050388-CDS-H-paniculata_contig1253:15577..157051622928973.9050388-CDS-H-paniculata_contig1253:15577..15705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 15578..15705 +
1691480687.7221222-CDS-H-paniculata_contig1253:15577..157051691480687.7221222-CDS-H-paniculata_contig1253:15577..15705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 15578..15705 +
1622928973.9157443-CDS-H-paniculata_contig1253:16071..162021622928973.9157443-CDS-H-paniculata_contig1253:16071..16202Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 16072..16202 +
1691480687.7318797-CDS-H-paniculata_contig1253:16071..162021691480687.7318797-CDS-H-paniculata_contig1253:16071..16202Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 16072..16202 +
1622928973.9245474-CDS-H-paniculata_contig1253:16538..166791622928973.9245474-CDS-H-paniculata_contig1253:16538..16679Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 16539..16679 +
1691480687.7411106-CDS-H-paniculata_contig1253:16538..166791691480687.7411106-CDS-H-paniculata_contig1253:16538..16679Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 16539..16679 +
1622928973.9354613-CDS-H-paniculata_contig1253:17042..171461622928973.9354613-CDS-H-paniculata_contig1253:17042..17146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 17043..17146 +
1691480687.7505813-CDS-H-paniculata_contig1253:17042..171461691480687.7505813-CDS-H-paniculata_contig1253:17042..17146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 17043..17146 +
1622928973.946913-CDS-H-paniculata_contig1253:17297..174891622928973.946913-CDS-H-paniculata_contig1253:17297..17489Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 17298..17489 +
1691480687.7575505-CDS-H-paniculata_contig1253:17297..174891691480687.7575505-CDS-H-paniculata_contig1253:17297..17489Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 17298..17489 +
1622928973.9593735-CDS-H-paniculata_contig1253:17711..178371622928973.9593735-CDS-H-paniculata_contig1253:17711..17837Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 17712..17837 +
1691480687.7646978-CDS-H-paniculata_contig1253:17711..178371691480687.7646978-CDS-H-paniculata_contig1253:17711..17837Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 17712..17837 +
1622928973.9684994-CDS-H-paniculata_contig1253:18177..184481622928973.9684994-CDS-H-paniculata_contig1253:18177..18448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 18178..18448 +
1691480687.7722282-CDS-H-paniculata_contig1253:18177..184481691480687.7722282-CDS-H-paniculata_contig1253:18177..18448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 18178..18448 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1253.1592.1

>prot_H-paniculata_contig1253.1592.1 ID=prot_H-paniculata_contig1253.1592.1|Name=mRNA_H-paniculata_contig1253.1592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=568bp
MLSGRYLADYRAAWRSTRTIRILRHCSMDRGKLGCHHGEFIMSSTLCTSS
RNGSNRQRQDTLQWRKGGAANAGGEGNILRICVVGSGPAGFYVTKYLLKE
AELGCEIAVDVLDMLPTPFGLVRFGVAPDHPEVKAVQADFEQVASDPRLH
FFGNVRLGQDVSAAQLSSLYDVVVLAYGAAGDRALRVPGADLKGVFSARA
FVNWYNGHPDFAHLSGEFHAALASSDTVVVVGVGNVALDCARILVKGADA
LRSTDICEHTMDVLESTGSKLRRVLVLGRRGHVQASFTIKELRELTKLDG
VTCVVKYDELEMGRTPASLDILKATRAKTRIDALLTKVAEGSKIVSAGTK
SVELRFLLGPLEVIPSNGSSDRVGSIRVVRNRLELNPGTGSERAVAVSEE
TEVVPCGMVLGSIGYLCLPVEGVPYDDLNSVIKNEGGRVAGTVGMYCSGW
ARRGPSGIIGTNITDARSVVAAIVQDMSEGRLVPNDNAEGRQGLIRMLAS
EQTSEGASRTEGGMDSIPKPVRIVNWDGYKGIDRHELASGGSKGKPREKL
VDIGQMLEIADKENKGS*
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mRNA from alignment at H-paniculata_contig1253:12840..18572+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1253.1592.1 ID=mRNA_H-paniculata_contig1253.1592.1|Name=mRNA_H-paniculata_contig1253.1592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5733bp|location=Sequence derived from alignment at H-paniculata_contig1253:12840..18572+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGCTCAGCAGGGGTAGGGAATGTTGTCAGGACGATACCTAGCTGATTA
TAGGGCCGCATGGCGTTCTACCCGTACCATTCGCATTTTGCGTCATTGTT
CTATGGATCGGGGAAAACTGGGTTGCCATCATGGAGAGTTTATCATGAGT
TCAACCCTTTGCACCTCTTCCAGAAACGGGTCTAACAGACAACGCCAGGA
CACTTTGCAATGGCGTAAGGGAGGAGCAGCAAACGCTGGTGGTGAGGGGA
ACATTCTTCGGATTTGTGTCGTCGGATCAGGGCCTGCTGGGTTTTACGTC
ACCAAGTATTTGCTCAAGGCACGTTGCAATGTGTCAGCTGTTGTTCTGTC
CCCAGGTGTCAACATTACAGCAGAGGGTGGTGATACCAAATACTGGAATA
TACCAGGTCCACGACGAGCTGTTGAGAGATATGTAGATGTGTTAGCCCAC
GTATCAAGCTCAGATCAGGTTACGGTAGGTGTTGCTAACTGGAAGCAACT
ATAGAGCAGCCTCAGCCATATTGTATATTGACCTTATGCATAAACAGGCA
ATTGATCAACGAGACTTCCACACTTGTATTGTGCGATAAGCAGGTCTTTT
CAAGTACCTACTTCGTGTTTCCCGCTGCCCATTTCGCCAACACAGGAGGC
GGAGCTAGGCTGCGAAATAGCTGTTGATGTTTTAGACATGCTGCCAACTC
CGTTTGGCTTGGTGAGGTTCGGGGTTGCCCCGGATCATCCCGAGGTCAAG
GCTGTGCAAGCTGACTTCGAGCAGGTGCGCTATTTTTAATGTACTACTAT
AGTTAGGGGGAGTGATAGGGGGGACTACGGGTGGAAACCTGTCCCCGACA
TTTTATTTATTATTTTTCAGATATAACCGAATTTTTCAAATGAGCCAATC
AGAAAGGCACAGGCAAGAATCCGCAACAACCGATCGAACTGAAATGAGGC
AAGTTGGTCCGCACAACACACAAGAGGCATGGCTGAGCGCTGTGCACCAT
CTGAGCTGTCGCCTGTGGGCAATACAGCGTCACGAGCAAGTAAAACCGTG
CCAGTGTCAAGTGAGGCCGCAGCGCCTCGGACAACGCCAAGCCATCTCTA
TCCGCGCGTGTTTCAAATTCCGCGCAGCTTCATGCTTTGAGGGGCTTTTA
CCAGATCTGGTTTTGACCAATTTGCTCCTTCAGCTAGCTATTGACTTTTT
TCACTTAGCCTGGTGCCTTGGTTTTCGACGGGTGCCCACATTCGCCTTTT
GCTGAGCCTTATAGCTACTATAAAGCACTGAAAGAGATTGGGCAAGTCTT
GTCGAGCGATCTGATTTATTGTCTGTACTGATTGTTGTACTGGTGTACAC
CGATCACGGGGTGGTTTCTATCCCGCCAGCGACTATACTCGCCTTCAAAA
TTTGTGCGGTCACTCATTTTTCTTGAACCCTCAGTAATTTTTTTTAACTT
TGCTGAGATCCTGCTGAATTTAGATATATGGTTTGATAGCTGAAGTTAGC
ACAGATACGCGTAGCCACCAAGTCATGCGGAGTTATGTTCCACATTTTTT
TTACTTGAAATTAGTATCGAAAAAATTGGCTGAATGGCAAGCCATGCGAT
CTTTGTTGAAGCAGTTCTCATTGACAACTGCGAGGAATCATGCGCGGTTT
GTCGTGCTGTGTTCGCTGTAACCAGTACTAGTGCATGCGCAGTGGCAATT
TTGGCTGAGCGAAAAAAGGAGCGAGCTACGGAAAGAAATATCTTCAAAAT
ACACTGTTTTCGTGGCGTGCGTCACCAACATAAGACGAATCCCAAATCGC
CACTGCACATGCACTAGATCACAGCTGTCGACATTGCTTAGTACATTGGC
ATCACCCTGTTCGATCTCAGAGCTAAGATTTTCTTGATATAAGGTTCAGT
ACTTGAATCCATTAATTCGTAATTTTTGGGTTATGACGTAAAAACAACAC
AAAAGGGAATTTCATTTTGGTCTTTGGGACCGGTTTGGGGCCATCGACCA
CCCCGTATCGCTTTCTCTAAGGGCACATGAGATGAGCAGATAGCTGGAAG
TGCGTTTTTAGACGAAACAGTATCTAGTTGTTGCATGTATTGTAGGTAAC
GCGATCCATGGCTGGTCCACTGTTTGTGTCACATGGCTGACGATTTCAGC
GTAGATCGTCATGAGTGCTGCACAGAGGATTTGGATGGTTCGGGCGTTGA
GGTGCTGGAATGACAGAAAGACTCGATCGAAAGTGAAACTAAGTATCCAC
AATTAATCGTACCGTCCGAATGTCTGTAGGTGGCCTCTGATCCAAGGCTA
CATTTTTTTGGCAATGTGCGTCTCGGGCAAGATGTGTCTGCAGCACAACT
GTCGAGTCTGTACGATGTTGTAGTACTCGCTTACGGAGCTGCTGGGGACA
GAGCGCTAAGGGTACCAGGGGCGGACTTGAAAGGCGTGTTTTCGGCAAGG
GCTTTCGTCAATTGGTGAGACATGCGTGTGAACGTAACAGTGCGAATTGT
ATGATGAAAAGTTGTCGCTTTCGTCGTCAAGCTGTAGCGTGTTTGTGTAA
CTCGAGATGACGCATTTCGGGTGTGTGCCAAGATTAACGATGCCTACTCT
ACCGTAGCGGCCAATACTGTAATGAATATTGCGTGCTATTTGGACTTTAT
TGGTCTCGTACTTGGTTTATGTTCAAGTTGGGGGGGGTGACACAAGTAGT
TTTGTGTCAACCAATAACTACTGAACCTTGTTTCCCAGGTATAACGGGCA
CCCTGACTTCGCCCATCTGTCGGGAGAGTTTCACGCGGCCTTGGCTTCGT
CCGATACGGTAGTGGTCGTCGGTGTCGGAAACGTGGCGCTCGACTGCGCG
CGTATACTCGTCAAGGGTGAGACGCAAACGCGCAAAACCTGTACCACCCG
CTGAAGCGACGAAAATGAGAGTACTATCCGTGGTATGCCCATTTTATGGT
TCCGCGGGTTGTGGTGACTCGGCGAACTGTAGACCAAACACAAGTGTTGT
GTGGACCAATCGTTGCGACACTAATATCACCGAATAACATTTTAAACACG
CCCGCACGTTTTTCGAAAACGTCCCCCGAGGCGGAGATGTGCAGAGGGTG
GCATCAGCCCTTGTACGTTTTTACACACAATACCACGCCTCTAAAAGAGT
TTTACGTCGCACTTGATGCTTCGATATTCTGCGTCGCGCTTACTTTCGGT
GCCGTGCGTACGAACTACCTTGTTGTGAACAGGGGCGGATGCTCTCCGAA
GTACAGACATTTGCGAGCACACGATGGATGTGTTGGAGTCAACGGGTTCT
AAATTGCGGCGCGTTTTGGTGCTCGGACGTCGTGGGCATGTACAAGCATC
GTTCACCATAAAAGTGGGCCTTGAACACAGCGCAGCCATGTACATTAGCT
CACGCACATGTCATGCTTGGTAAAGTTGTTACGTCAGTTAATTTTGGAAT
TGGCGTCTTGTGGTAGATAGTTAGCATCTTTGAGTTGTTGCCATGTGCGT
TGTGTGTTTACATGCATGCGACAACTTTCATTCACGTCTTTGCCGCGATT
TCTGTAGTTTCTTTTTTTCTGGCTTTGGTGGCTGTGAATTGCCAGCAACG
ATCAGCCAACCGCTCAGCTAGGCCTCGATATTTTCGATATTGTTCACCAC
ATCGAAGAGATAATCCACCTTGCGCTGTTACGGCCCTTTCCTTCCCTAGG
AACTTCGTGAGCTCACGAAGCTGGACGGAGTCACTTGTGTGGTGAAGTAC
GATGAACTGGAGATGGGTCGAACACCGGCCAGTCTCGATATACTGAAGGC
AACTCGGGCAAAGACGAGAATCGATGCTCTGTTGACCAAGGTGACGTATT
GACCTAAAATGTCAAATATTGCGGTTACTATTCTTCCCAGCTATATCTGG
TTAGTAACATAAGGTAAAGTGGGAAGCTGTGTGAGTCGATGCTGCTGTGA
TAATAGAGCTATATTATGAGCATTTCAATGGCATGCTACCTTCGATGCCC
GCGAAGCGGTTCTTCGTGCTACTCGTGACGACAGACGCTATAAACAGCGC
TATGGCTGTATCACGATTACAAAGTGTTCATGCGAAACTCCTCTTTTTCC
CTGCCATCCTGAGTCGCTGTTGGTTATCAAGATCAGCAAAAATTGTACAA
CTATATAACCGGCGGACAGTTTATCCTACTGCTATCTCCGCGTGCCCGCG
CAGGTGGCAGAGGGATCAAAGATTGTGTCGGCAGGAACAAAGTCAGTGGA
GCTGCGGTTTCTACTCGGGCCATTGGAGGTTATTCCAAGCAATGGTTCCT
CCGATAGGTACTTCATATCTTTCTTTCCTTCGGATCAGTAAACTATCCAC
TCGTACGAGCGGTGTTTCTAATTGTATGGCACGTTGGCTCATAAGCCAAC
CTTGCGCCTCGTCATTTTCAACGTTTGCTCCCCTGTGTCATATGTGTTCT
ACTGTCAGGGTGGGTAGTATCCGCGTGGTGCGCAATCGACTCGAGCTCAA
CCCAGGAACAGGATCCGAACGCGCTGTTGCCGTGAGCGAGGAGACCGAAG
TTGTCCCGTGCGGCATGGTTCTGGGGTCTATAGGCTATCTGTGCCTGCCG
GTTGAGGGCGTACCGTACGACGATTTAAACTCGGTCATTAAAAACGAAGG
GTGCGTAAAGTATCCCTCGTTGCCATGAACAGTTGGCGCTAGACCCGGCG
CCCCTGGTCTGTACAACGAAACGGGATGCTGTCTTGCCCTCTTTGTGGCC
TGCTTGAGCTAATATTCTTTTTTTTGCATTATGGCGTTTTCGCCAACTGT
ATCCGCATGTGATATCAGAAAAATGGACTGTTTTTTATTTTAAGAGAGTC
TCCCATTCGTGTGCGCATCCAGGGGACGGGTGGCGGGCACGGTGGGCATG
TACTGTAGCGGGTGGGCGAGGCGTGGACCTAGCGGCATAATCGGCACCAA
TATCACAGACGCCCGGTCTGTGGTGGCCGCAATCGTCCAAGACATGAGGT
GAGATATTCCGTGATGCATGGTGACCGACTGTGCAACTGTGATGAGGCCC
TGTCGCGAATCGGATACACGCTGGTCGGCTAATTATGACAGATAAGGAAT
CGAAAAATGCCCCAATAAACTTCATACAGTGGAAGTCCATTTGCTTAACT
TACATTGCCTCCAACAGTATCAATCGGACAAGGTGTGCGTAGTATCTGCG
GTACTTGGATTCCATATGTCCTGTTACATTACTGATCACGCGAACCCGAA
CGCATCATTCTCTAGTTTGCCACTACTTCTAAACTTCATCCTGACAACCT
CCGGCGTGCGGATCCTGTTTTTTTTTTAATCACCACAGCGAGGGCCGCCT
GGTCCCAAACGACAATGCTGAAGGTCGGCAGGGTCTCATCCGAATGTTGG
CGTCAGAGCAGACATCCGAAGGGGCATCCAGAACAGAGGGGGGCATGGAT
TCGATACCAAAACCAGTGCGGATAGTTAACTGGGACGGTTACAAGGGGAT
AGATCGCCACGAATTAGCAAGCGGGGGGTCGAAAGGAAAACCAAGAGAAA
AGCTGGTGGATATTGGACAAATGTTGGAGATCGCTGATAAGGAAAATAAG
GGGTCATAGCATGGCGCTATTCGTGCTCAACAGGATTGTGTGCACCATGG
CGTCTCGCTTGAACAGTATATTTATAGTACAGCACGCCGAGCATAGTCCG
GGCTTTGTAAATACAACCACAGGTTATTATTTT
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Coding sequence (CDS) from alignment at H-paniculata_contig1253:12840..18572+

>mRNA_H-paniculata_contig1253.1592.1 ID=mRNA_H-paniculata_contig1253.1592.1|Name=mRNA_H-paniculata_contig1253.1592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3408bp|location=Sequence derived from alignment at H-paniculata_contig1253:12840..18572+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGTCAGGACGATACCTAGCTGATTATAGGGCCGCATGGCGTTCTAC
CCGTACCATTCGCATTTTGCGTCATTGTTCTATGGATCGGGGAAAACTGG
GTTGCCATCATGGAGAGTTTATCATGAGTTCAACCCTTTGCACCTCTTCC
AGAAACGGGTCTAACAGACAACGCCAGGACACTTTGCAATGGCGTAAGGG
AGGAGCAGCAAACGCTGGTGGTGAGGGGAACATTCTTCGGATTTGTGTCG
TCGGATCAGGGCCTGCTGGGTTTTACGTCACCAAGTATTTGCTCAAGATG
TTGTCAGGACGATACCTAGCTGATTATAGGGCCGCATGGCGTTCTACCCG
TACCATTCGCATTTTGCGTCATTGTTCTATGGATCGGGGAAAACTGGGTT
GCCATCATGGAGAGTTTATCATGAGTTCAACCCTTTGCACCTCTTCCAGA
AACGGGTCTAACAGACAACGCCAGGACACTTTGCAATGGCGTAAGGGAGG
AGCAGCAAACGCTGGTGGTGAGGGGAACATTCTTCGGATTTGTGTCGTCG
GATCAGGGCCTGCTGGGTTTTACGTCACCAAGTATTTGCTCAAGGAGGCG
GAGCTAGGCTGCGAAATAGCTGTTGATGTTTTAGACATGCTGCCAACTCC
GTTTGGCTTGGTGAGGTTCGGGGTTGCCCCGGATCATCCCGAGGTCAAGG
CTGTGCAAGCTGACTTCGAGCAGGAGGCGGAGCTAGGCTGCGAAATAGCT
GTTGATGTTTTAGACATGCTGCCAACTCCGTTTGGCTTGGTGAGGTTCGG
GGTTGCCCCGGATCATCCCGAGGTCAAGGCTGTGCAAGCTGACTTCGAGC
AGGTGGCCTCTGATCCAAGGCTACATTTTTTTGGCAATGTGCGTCTCGGG
CAAGATGTGTCTGCAGCACAACTGTCGAGTCTGTACGATGTTGTAGTACT
CGCTTACGGAGCTGCTGGGGACAGAGCGCTAAGGGTACCAGGGGCGGACT
TGAAAGGCGTGTTTTCGGCAAGGGCTTTCGTCAATTGGTGGCCTCTGATC
CAAGGCTACATTTTTTTGGCAATGTGCGTCTCGGGCAAGATGTGTCTGCA
GCACAACTGTCGAGTCTGTACGATGTTGTAGTACTCGCTTACGGAGCTGC
TGGGGACAGAGCGCTAAGGGTACCAGGGGCGGACTTGAAAGGCGTGTTTT
CGGCAAGGGCTTTCGTCAATTGGTATAACGGGCACCCTGACTTCGCCCAT
CTGTCGGGAGAGTTTCACGCGGCCTTGGCTTCGTCCGATACGGTAGTGGT
CGTCGGTGTCGGAAACGTGGCGCTCGACTGCGCGCGTATACTCGTCAAGG
GTATAACGGGCACCCTGACTTCGCCCATCTGTCGGGAGAGTTTCACGCGG
CCTTGGCTTCGTCCGATACGGTAGTGGTCGTCGGTGTCGGAAACGTGGCG
CTCGACTGCGCGCGTATACTCGTCAAGGGGGCGGATGCTCTCCGAAGTAC
AGACATTTGCGAGCACACGATGGATGTGTTGGAGTCAACGGGTTCTAAAT
TGCGGCGCGTTTTGGTGCTCGGACGTCGTGGGCATGTACAAGCATCGTTC
ACCATAAAAGGGCGGATGCTCTCCGAAGTACAGACATTTGCGAGCACACG
ATGGATGTGTTGGAGTCAACGGGTTCTAAATTGCGGCGCGTTTTGGTGCT
CGGACGTCGTGGGCATGTACAAGCATCGTTCACCATAAAAGAACTTCGTG
AGCTCACGAAGCTGGACGGAGTCACTTGTGTGGTGAAGTACGATGAACTG
GAGATGGGTCGAACACCGGCCAGTCTCGATATACTGAAGGCAACTCGGGC
AAAGACGAGAATCGATGCTCTGTTGACCAAGGAACTTCGTGAGCTCACGA
AGCTGGACGGAGTCACTTGTGTGGTGAAGTACGATGAACTGGAGATGGGT
CGAACACCGGCCAGTCTCGATATACTGAAGGCAACTCGGGCAAAGACGAG
AATCGATGCTCTGTTGACCAAGGTGGCAGAGGGATCAAAGATTGTGTCGG
CAGGAACAAAGTCAGTGGAGCTGCGGTTTCTACTCGGGCCATTGGAGGTT
ATTCCAAGCAATGGTTCCTCCGATAGGTGGCAGAGGGATCAAAGATTGTG
TCGGCAGGAACAAAGTCAGTGGAGCTGCGGTTTCTACTCGGGCCATTGGA
GGTTATTCCAAGCAATGGTTCCTCCGATAGGGTGGGTAGTATCCGCGTGG
TGCGCAATCGACTCGAGCTCAACCCAGGAACAGGATCCGAACGCGCTGTT
GCCGTGAGCGAGGAGACCGAAGTTGTCCCGTGCGGCATGGTTCTGGGGTC
TATAGGCTATCTGTGCCTGCCGGTTGAGGGCGTACCGTACGACGATTTAA
ACTCGGTCATTAAAAACGAAGGGGTGGGTAGTATCCGCGTGGTGCGCAAT
CGACTCGAGCTCAACCCAGGAACAGGATCCGAACGCGCTGTTGCCGTGAG
CGAGGAGACCGAAGTTGTCCCGTGCGGCATGGTTCTGGGGTCTATAGGCT
ATCTGTGCCTGCCGGTTGAGGGCGTACCGTACGACGATTTAAACTCGGTC
ATTAAAAACGAAGGGGGACGGGTGGCGGGCACGGTGGGCATGTACTGTAG
CGGGTGGGCGAGGCGTGGACCTAGCGGCATAATCGGCACCAATATCACAG
ACGCCCGGTCTGTGGTGGCCGCAATCGTCCAAGACATGAGGGGACGGGTG
GCGGGCACGGTGGGCATGTACTGTAGCGGGTGGGCGAGGCGTGGACCTAG
CGGCATAATCGGCACCAATATCACAGACGCCCGGTCTGTGGTGGCCGCAA
TCGTCCAAGACATGAGCGAGGGCCGCCTGGTCCCAAACGACAATGCTGAA
GGTCGGCAGGGTCTCATCCGAATGTTGGCGTCAGAGCAGACATCCGAAGG
GGCATCCAGAACAGAGGGGGGCATGGATTCGATACCAAAACCAGTGCGGA
TAGTTAACTGGGACGGTTACAAGGGGATAGATCGCCACGAATTAGCAAGC
GGGGGGTCGAAAGGAAAACCAAGAGAAAAGCTGGTGGATATTGGACAAAT
GTTGGAGATCGCTGATAAGGAAAATAAGGGGTCATAGCGAGGGCCGCCTG
GTCCCAAACGACAATGCTGAAGGTCGGCAGGGTCTCATCCGAATGTTGGC
GTCAGAGCAGACATCCGAAGGGGCATCCAGAACAGAGGGGGGCATGGATT
CGATACCAAAACCAGTGCGGATAGTTAACTGGGACGGTTACAAGGGGATA
GATCGCCACGAATTAGCAAGCGGGGGGTCGAAAGGAAAACCAAGAGAAAA
GCTGGTGGATATTGGACAAATGTTGGAGATCGCTGATAAGGAAAATAAGG
GGTCATAG
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