mRNA_H-paniculata_contig1253.1590.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1253.1590.1
Unique NamemRNA_H-paniculata_contig1253.1590.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 8.040e-150
Identity = 227/285 (79.65%), Postives = 246/285 (86.32%), Query Frame = 2 
Query:   92 MSSAMDVDAGAGVEEAKGEVVPPAGNGAGNKGQKGEGDRNVMLHPLTVITISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGSKELPVLIHESEAHTLDGQSKMIFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTMDGEQFSEEFMR 946
            M+  M+VDAG  VEE KGE        A   G+KG    N+MLHPLTVITISDH+TRVSTGGGAQEAGGRVIGLLFGSQNG DVSIYDA+EVACTA G +G+ELNE++VEKQK+LYTAVYPMYEILGWYTVGT  TE DL IQRQM KFN +PLFLLMNP PAQGSKELPVLIHESE+H LDG ++  FVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSL+TLLARI+IL RFL+ETK G + VDYPLLRQISSICNQLPTMDG QFSEEFMR
Sbjct:    1 MADTMEVDAG--VEEKKGEEQKVPATAASAPGKKGN---NIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNISVDYPLLRQISSICNQLPTMDGAQFSEEFMR 280
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BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 3.490e-91
Identity = 147/195 (75.38%), Postives = 161/195 (82.56%), Query Frame = 2 
Query:   92 MSSAMDVDAGAGVEEAKGEVVPPAGNGAGNKGQKGEGDRNVMLHPLTVITISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGSKELPVLIHESEAHTLDGQSKMIFVQLAFQ 676
            M+  M+VDAG  VEE KGE        A   G+KG    N+MLHPLTVITISDH+TRVSTGGGAQEAGGRVIGLLFGSQNG DVSIYDA+EVACTA G +G+ELNE++VEKQKDLYTAVYPMYEILGWYTVGT  TE DL IQRQM KFN +PLFLLMNP PAQGSKELPVLIHESE+H LDG ++  FVQLAFQ
Sbjct:    1 MADTMEVDAG--VEEKKGEEQNVPATAASAPGKKGN---NIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQ 190
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BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA)

HSP 1 Score: 235 bits (600), Expect = 7.380e-72
Identity = 120/249 (48.19%), Postives = 168/249 (67.47%), Query Frame = 2 
Query:  203 DRNVMLHPLTVITISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVE-LNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGSKELPVLIHESE-AHTLDGQSKMIFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTMDGEQFSEEFM 943
            +R + LHPL +ITISDH+T + +G   +  G +V+GLL+G Q GL+VSI DA E+  T  GDDGV  +    V  QKDLYT VY  YE+LGWY+VG  A   D+ + R+M K+N++P FLLM+P P   + +LP+ ++ES+     D    ++FV   FQL+T QAE+I++E +AKATPTDG++S+DLH  ++  SL+TL  R   L  FL+ TK G+V  DY LLRQ+SSICNQLP +D  +   +F+
Sbjct:   23 ERKIFLHPLAIITISDHFTCIESGASVKPRGSKVLGLLWGKQQGLEVSIMDAQELHYTL-GDDGVPVITAEKVNSQKDLYTEVYKNYELLGWYSVGIDADGKDMAVHREMTKYNESPFFLLMHPSPDPEASDLPISLYESKMVMGADDTPTIVFVTSEFQLQTMQAERITMERIAKATPTDGVASLDLHINSLGASLRTLNLRFDALLAFLKATKAGEVPTDYRLLRQVSSICNQLPAVDTAELKGDFI 270
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BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: A0A7S2BCI8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCI8_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.400e-66
Identity = 108/247 (43.72%), Postives = 158/247 (63.97%), Query Frame = 2 
Query:  203 DRNVMLHPLTVITISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGSKELPVLIHESEAHTLDGQSKMIFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTMDGEQFSEEFM 943
            +  V LHPL +I +SDHYT +  GG   + G +V+GLL+G Q GL+VSI DA+E+  +   +    +    V   KDLY   +   ++LGWY+VG    E D+ I R+M K+N++P FLLMNP P + +K+LP+ ++ESE H ++    M+FV   FQL+T Q E+I     AK    +G +++DLH   VS+SLKTL +R   L ++L+ TKNG V  DY LLRQ++S+CNQLP +D ++ S EF+
Sbjct:   30 ENKVFLHPLAIIGMSDHYTTIEAGGSLAKPGSKVLGLLWGRQQGLEVSIMDAMELGYSLDANGVPVIEAEKVNGMKDLYLENFKDRDLLGWYSVGLEVVEMDMAIHREMTKYNESPFFLLMNPNPDEEAKDLPISLYESEMHVINDTPTMLFVTCEFQLQTMQMERIXXXXXAKEKAHEGEATLDLHMNTVSSSLKTLSSRASALVQYLEATKNGTVPTDYRLLRQVASVCNQLPAVDTDELSGEFV 276
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BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA)

HSP 1 Score: 220 bits (561), Expect = 9.350e-66
Identity = 110/252 (43.65%), Postives = 168/252 (66.67%), Query Frame = 2 
Query:  161 AGNGAGNKGQKGEGDRNVMLHPLTVITISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGSKELPVLIHESEAHTLDG-QSKMIFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTM 913
            A  GA      G+G  ++ LHPL +ITISDHYTRVSTGGG      +++G+LFG ++G ++ IYDA E+     G + + L+++ V KQ +LY AVYP Y++LGWY+VG      D+K+Q+QM      P+F+L++P+P + +K LPV +++SE     G  +  +FVQ +FQL+T QAEQI +EHVA++TP +G S+I+ HA  ++TSL  L +R+ +L R+L   + G V  D+ LLRQI+++ ++L  M
Sbjct:   11 AAEGAEESKSAGDGQLSIHLHPLAIITISDHYTRVSTGGGVPPRDAKILGVLFGERSGAEIGIYDASEIGYDVVGGE-IVLSQASVAKQVELYEAVYPTYKVLGWYSVGLEPCPSDIKLQQQMKTHCANPIFVLLDPEPPKDAKALPVTVYQSEDQAGGGGAAATVFVQGSFQLQTVQAEQIGMEHVARSTPAEGSSAIERHATTMTTSLTALASRLAVLRRYLVAVRGGDVPADHKLLRQITAVTSELRAM 261
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BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: A0A7S2S2E8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2E8_9STRA)

HSP 1 Score: 219 bits (557), Expect = 4.810e-65
Identity = 110/265 (41.51%), Postives = 169/265 (63.77%), Query Frame = 2 
Query:  149 VVPPAGNGAGNKGQKGEGDRNVMLHPLTVITISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGSKELPVLIHESEAHTLDGQSKMIFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTMDGEQFSEEFM 943
             +P   +     G   E +R + LHPL ++ +SDH T + TG   +  G +V+G+L+G Q GL VSI DAVE+A          ++   V +QK LY  VY  +E+LGWY+VG   T  D  IQ++  K+N++P FLL+ P P   +K+LP+ ++ES+   ++ + KM FV  +FQL+TTQAE+I++E V+KA+ T G+SS+DLH   +S+SL++L +R QIL  +L+   + QV VD+ LLR+I+S+CNQLP  D ++    F+
Sbjct:   34 TIPAMASSEPGTGGDPESNRKISLHPLAIVAVSDHCTGIQTGASTKPPGSKVLGILWGKQQGLQVSITDAVELAYELDAQGMPVIDPEAVNQQKSLYMEVYKGHEMLGWYSVGEEVTPVDGLIQQEFTKYNESPFFLLVQPVPDPEAKQLPLTLYESQWTQVNEEMKMTFVPCSFQLDTTQAERITMEAVSKASTTAGVSSMDLHVQELSSSLRSLASRTQILVSYLKAIADQQVPVDHKLLREIASVCNQLPAADAQELQGAFL 298
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BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: A0A7S4A6I1_9STRA (COP9 signalosome complex subunit 6 (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6I1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.050e-62
Identity = 106/248 (42.74%), Postives = 161/248 (64.92%), Query Frame = 2 
Query:  206 RNVMLHPLTVITISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGSKELPVLIHESEAHTLDGQSKMIFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTMDGE-QFSEEFMR 946
            R V LHPL ++ +SDH+TRVS GG  Q AG  V+GLLFG Q GL+V + DA+EV  T A     +++   +E+ K LYT VY   +++GWY V  A T   L +  + +K+N++PLFLLM+P+P Q +K+LP+ ++E+E H L    K +F  + FQLETTQ E++++E VA+   TD    +D H  ++ TSLKTL AR++ L  +L   + G V  D+ LLR++ ++C++LP++  +  F E F+R
Sbjct:   43 RTVALHPLAIVGVSDHFTRVSVGGSRQGAGSPVVGLLFGMQRGLEVDVVDAIEVHLTEA----TKVDAQFLEQSKALYTEVYEDRDLVGWYAVAPAPTANHLALHEEFVKYNESPLFLLMDPQPQQDAKDLPIQVYETEVHDL----KTVFATVPFQLETTQTERVAMEAVAQTGCTDRELMLDTHVASLDTSLKTLAARVRALRDYLAAVRAGTVAADHSLLRKLGALCDRLPSLKSDGAFEEAFLR 282
[Close]
BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: A0A2D4BSB4_PYTIN (COP9 signalosome complex subunit 6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSB4_PYTIN)

HSP 1 Score: 203 bits (516), Expect = 4.350e-59
Identity = 106/268 (39.55%), Postives = 166/268 (61.94%), Query Frame = 2 
Query:  173 AGNKGQKGEGDRNVMLHPLTVITISDHYTRVSTG------GGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGS--KELPVLIHESEAHTLDGQSKMIFVQLAFQLETTQAEQISVEHVAKATPT--DGISSIDLHAGAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTMDGEQFSEEFMR 946
            A      G G+R+V +HPL V+ I+DHYTR            A  A  +VIG LFG QNGLDV+++D+ E+      +  V +++  +  +   ++ V+P +E+LGWYTVG+ A + DL I R +M+FN++PLFLLM+P P   S  K+LP+ + ESE H LDG   MIFV+ ++++ET++ E I V+ ++K  P      SS+  + G V  ++K L  +++++ R+L+  K G++  D+ LLRQISS+CNQLP +   QF   F++
Sbjct:   17 ANENAASGGGERHVQIHPLVVMNIADHYTRQKRNFQHENKKAALSALPQVIGALFGVQNGLDVAVFDSFEIKYDLGSNGDVVIDKEFLTSRIQQFSQVFPGFELLGWYTVGSKAKQSDLTIHRSIMEFNESPLFLLMDPTPQGMSTKKKLPISLFESELHVLDGSPTMIFVKTSYKIETSEMEGICVDRISKIAPMGDSSKSSLXPYLGNVRDAIKMLQRQVEVIVRWLEAVKKGEISADHNLLRQISSLCNQLPALSSPQFDASFLQ 284
[Close]
BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: A0A5D6XJP9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP9_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.720e-58
Identity = 105/255 (41.18%), Postives = 157/255 (61.57%), Query Frame = 2 
Query:  194 GEGDRNVMLHPLTVITISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNP--KPAQGSKELPVLIHESEAHTLDGQSKMIFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHA--GAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTMDGEQFSEEFMR 946
            G G+R + LHPL ++  +DH+TR   G     +  +VIG LFG Q+GLDV++YD+ E+       D V+L++  V  +   ++ V+P +E+LGWYTVG+     DL   R +M+FN++PLF+L++P  K     K+LPV + ESE H L+G   M+FV+  F++ET++ E ISV+H++K  P    S   LH   G V  ++K L  ++ +L RFLQ  KNG   +D  LLR ISS+CNQLP M  + F   F++
Sbjct:   23 GGGERQIQLHPLVLMNAADHFTRERRGCAPGASPPQVIGALFGVQSGLDVAVYDSFELKYDVVNGD-VQLDKEFVTSRIQQFSQVFPGFELLGWYTVGSKVQPSDLATHRSIMEFNESPLFMLLDPVSKALNTKKKLPVTLFESELHMLNGAPTMLFVKAPFKIETSETEGISVDHISKIAPIGDSSKSSLHPYLGNVRDAMKMLDRQVDVLVRFLQAMKNGDAPMDRNLLRHISSVCNQLPAMTSKSFDASFLQ 276
[Close]
BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Match: UPI000C87477B (COP9 signalosome complex subunit 6 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C87477B)

HSP 1 Score: 198 bits (504), Expect = 1.510e-57
Identity = 100/251 (39.84%), Postives = 161/251 (64.14%), Query Frame = 2 
Query:  218 LHPLTVITISDHYTRVST------GGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDDGVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFNQAPLFLLMNPKPAQGSKELPVLIHESEAHTLDGQSKMIFVQLAFQLETTQAEQISVEHVAKATPTDGISS---IDLHAGAVSTSLKTLLARIQILERFLQETKNGQVVVDYPLLRQISSICNQLPTMDGEQFSEEFM 943
            LHPL ++ ISDH+TRV        GGG+  AGGRV G + G Q G  V I+++ E+ C     +   L+   +EK+ +LY  V+P + +LGWY+ G+ A E D+ I R +M  N++P+++L+NP      K+LPV I+ESE H +DG  ++IFV+  + +ET +AE+ISV+HVA   P+DG S+   +  H   + +++K L +R++IL ++L   + G + +D  LLRQ+SS+  +LPTM+ E+F ++F+
Sbjct:   13 LHPLVIVNISDHHTRVKAQGLYHGGGGSGGAGGRVFGCVIGVQRGRTVEIFNSFEILCDP---ETHTLDRPFLEKKMELYKKVFPNFYVLGWYSTGSDAQESDMLIHRALMDINESPVYVLLNPSTNPTRKDLPVTIYESELHVIDGIPQLIFVRSNYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRVKILHQYLVAMERGDIPLDNSLLRQVSSLLRRLPTMESEKFQDDFL 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1253.1590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBH4_ECTSI8.040e-15079.65COP9 signalosome complex subunit 6 n=1 Tax=Ectocar... [more]
A0A6H5KLY7_9PHAE3.490e-9175.38JAB_MPN domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2B7N9_9STRA7.380e-7248.19COP9 signalosome complex subunit 6 n=1 Tax=Dictyoc... [more]
A0A7S2BCI8_9STRA3.400e-6643.72COP9 signalosome complex subunit 6 n=1 Tax=Florenc... [more]
A0A835YT38_9STRA9.350e-6643.65JAB_MPN domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2S2E8_9STRA4.810e-6541.51COP9 signalosome complex subunit 6 n=1 Tax=Rhizoch... [more]
A0A7S4A6I1_9STRA1.050e-6242.74COP9 signalosome complex subunit 6 (Fragment) n=1 ... [more]
A0A2D4BSB4_PYTIN4.350e-5939.55COP9 signalosome complex subunit 6 n=1 Tax=Pythium... [more]
A0A5D6XJP9_9STRA3.720e-5841.18COP9 signalosome complex subunit 6 n=1 Tax=Pythium... [more]
UPI000C87477B1.510e-5739.84COP9 signalosome complex subunit 6 n=1 Tax=Dioscor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1253contigH-paniculata_contig1253:237..8279 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score436.0
Seed ortholog evalue1.6e-119
Seed eggNOG ortholog2880.D8LBH4
Preferred nameCOPS6
KEGG rclassRC00049
KEGG koko:K01194,ko:K01410,ko:K12179
KEGG ReactionR00010
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000338,GO:0000715,GO:0000909,GO:0002009,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0008150,GO:0008152,GO:0008180,GO:0009056,GO:0009057,GO:0009653,GO:0009888,GO:0009987,GO:0010387,GO:0016043,GO:0016333,GO:0019538,GO:0019827,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030163,GO:0030582,GO:0030584,GO:0030718,GO:0031647,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0036099,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046483,GO:0046983,GO:0048138,GO:0048140,GO:0048232,GO:0048468,GO:0048608,GO:0048609,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050821,GO:0050896,GO:0051276,GO:0051603,GO:0051704,GO:0051716,GO:0060429,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0070791,GO:0071704,GO:0071840,GO:0075259,GO:0090304,GO:0098727,GO:1901360,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.protein deneddylation
EggNOG OGsCOG1310@1,KOG3050@2759
Ec32 ortholog descriptionJAB1/MPN/MOV34 metalloenzyme domain
Ec32 orthologEc-27_003960.1
EC3.2.1.28,3.4.24.59
COG Functional cat.V
CAZyGH37
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00537,ko01000,ko01002,ko03029,ko04121
Exons7
Model size1102
Cds size1008
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928973.464919-UTR-H-paniculata_contig1253:236..3271622928973.464919-UTR-H-paniculata_contig1253:236..327Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1253 237..327 +
1691480687.528781-UTR-H-paniculata_contig1253:236..3271691480687.528781-UTR-H-paniculata_contig1253:236..327Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1253 237..327 +
1622928973.547438-UTR-H-paniculata_contig1253:8276..82791622928973.547438-UTR-H-paniculata_contig1253:8276..8279Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1253 8277..8279 +
1691480687.6218636-UTR-H-paniculata_contig1253:8276..82791691480687.6218636-UTR-H-paniculata_contig1253:8276..8279Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1253 8277..8279 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928973.4749124-CDS-H-paniculata_contig1253:327..4621622928973.4749124-CDS-H-paniculata_contig1253:327..462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 328..462 +
1691480687.5482264-CDS-H-paniculata_contig1253:327..4621691480687.5482264-CDS-H-paniculata_contig1253:327..462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 328..462 +
1622928973.4857118-CDS-H-paniculata_contig1253:4079..42901622928973.4857118-CDS-H-paniculata_contig1253:4079..4290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 4080..4290 +
1691480687.556282-CDS-H-paniculata_contig1253:4079..42901691480687.556282-CDS-H-paniculata_contig1253:4079..4290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 4080..4290 +
1622928973.4944627-CDS-H-paniculata_contig1253:5625..57141622928973.4944627-CDS-H-paniculata_contig1253:5625..5714Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 5626..5714 +
1691480687.5655684-CDS-H-paniculata_contig1253:5625..57141691480687.5655684-CDS-H-paniculata_contig1253:5625..5714Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 5626..5714 +
1622928973.503999-CDS-H-paniculata_contig1253:6123..62731622928973.503999-CDS-H-paniculata_contig1253:6123..6273Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 6124..6273 +
1691480687.5845768-CDS-H-paniculata_contig1253:6123..62731691480687.5845768-CDS-H-paniculata_contig1253:6123..6273Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 6124..6273 +
1622928973.5156076-CDS-H-paniculata_contig1253:6741..68171622928973.5156076-CDS-H-paniculata_contig1253:6741..6817Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 6742..6817 +
1691480687.5990586-CDS-H-paniculata_contig1253:6741..68171691480687.5990586-CDS-H-paniculata_contig1253:6741..6817Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 6742..6817 +
1622928973.5273464-CDS-H-paniculata_contig1253:7539..76321622928973.5273464-CDS-H-paniculata_contig1253:7539..7632Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 7540..7632 +
1691480687.6069243-CDS-H-paniculata_contig1253:7539..76321691480687.6069243-CDS-H-paniculata_contig1253:7539..7632Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 7540..7632 +
1622928973.5370605-CDS-H-paniculata_contig1253:8022..82761622928973.5370605-CDS-H-paniculata_contig1253:8022..8276Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 8023..8276 +
1691480687.614451-CDS-H-paniculata_contig1253:8022..82761691480687.614451-CDS-H-paniculata_contig1253:8022..8276Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1253 8023..8276 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1253.1590.1prot_H-paniculata_contig1253.1590.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1253 328..8276 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1253.1590.1

>prot_H-paniculata_contig1253.1590.1 ID=prot_H-paniculata_contig1253.1590.1|Name=mRNA_H-paniculata_contig1253.1590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=336bp
MSSAMDVDAGAGVEEAKGEVVPPAGNGAGNKGQKGEGDRNVMLHPLTVIT
ISDHYTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAVEVACTAAGDD
GVELNESVVEKQKDLYTAVYPMYEILGWYTVGTAATEFDLKIQRQMMKFN
QAPLFLLMNPKPAQGSKELPVLIHESEAHTLDGQSKMIFVQLAFQLETTQ
AEQISVEHVAKATPTDGISSIDLHAGAVSTSLKTLLARIQILERFLQETK
NGQVVVDYPLLRQISSICNQLPTMDGEQFSEEFMRVGVFLATYRLRLSVL
RLILHCARVLLETNMCLMTPRFFVRDYIVDQAGMK*
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mRNA from alignment at H-paniculata_contig1253:237..8279+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1253.1590.1 ID=mRNA_H-paniculata_contig1253.1590.1|Name=mRNA_H-paniculata_contig1253.1590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8043bp|location=Sequence derived from alignment at H-paniculata_contig1253:237..8279+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCTGCTTCTTCTCAAAGCTACCATTGCAAGAGGTGAAGTAGTTCAGGTC
GTGCAGTTGAACCGTCCTTGGTTAGAATTATTGCACCTGAAATGTCTTCT
GCAATGGATGTGGACGCTGGGGCTGGCGTGGAAGAGGCCAAGGGAGAGGT
TGTTCCTCCTGCTGGAAATGGCGCAGGAAACAAGGGACAAAAGGGCGAGG
GCGACCGCAATGTGATGCTGCACCCGGTGCGTTCATCCCAGGAAGACAGT
ATCGTTGTCCTGCTCTTGTGGTTGTGCTGCATGGAAGTGATAATGCGTGT
TAGAGATAGAGTTGTGCATTTTTCCAAGGCTATTTTGCAACCTCGGTCTT
TCCGCTTCTACGGCGCCTGGCGAATGCTGGATGGTCACGTGTGCGAGGTG
TTCCTGACTTCCAGCTTCGGTCTCATAACGATATTGTTCATCAGCATACG
TCTGCGGGTTGATTATTGGAGTGGAAGCCGCTCAAGTTGGACCACGCCTT
GAAATCTATCTTATCGGTTCACAAGTGCTCTCTGTCTCAATGTACAGTAT
AGACGGCTGTGCTGTAGATGACTATAGAGTTGTAACTTTGTCCAAGATGT
GGTACGAAAAACAGCCTCTCGTTCCCACCGCACATCCAAACTCCTGACTG
CACCATGCTGCACCCATCCATCGTTCATTCGTCACCAAGTATGAGCAGCG
ATATCGGTCACGTGTATACGGTGTTTATTCAGCCCCAAGTTCCGATCTAT
CTACGCTTGCCTGACTTACATCCTACATTGTTTCGGATCGCATCTACTCT
TTTAGCGTCAGCAGCCAAACATTGTTTCGGAACACAAAAGGTATCTGACA
GTCCCGCCGCGGAAAGATTCTGGGGAGGGGGGGGATCGTTTTTCATGGGC
CTACTGTAGTGGCATTGCCAACGGCAAACTTGTATTCGTCAAGCGCCCAA
TCATGAGCGGTAGTTGACGTATGCGTTGGTATACTGTTGTTTGAGGCAAT
CTAATTCCCGATTCCCAAGTCTTCATTCTCGCTGGCGGTAAAGCAGAATT
GCTTACATGTCAGTGGGTATCCACTACCTCGTACGCCTGTGTGAGGACGT
GGTTTGTTTAACCCCGTATCATTTCGAAACGCCATTTTATATATACAAAA
GAAAACACAACGAATAATATCGAAACGGAGGCTCATATTCGTATGAAAAC
GTTCAACTATCTCCGAGAAAACCTGCAGCTGCTGTTGACCACCGCAACGA
ACGTCGAACTTGACATCCAGCGAGAGTGACATGTTAGCATGAGGTGCGCT
TGAAAGAGCTACGAAGTGTCATGCTTTGTTCGAGAACGCGTGACCTTTTT
TGCACTGTGAAAGGATATAGATGACGAGCATCAAAACTATAGTCGCTGGC
ATAGATCTCTGTTGCCAGCATAGATTTTCCCCGATAGTCAAATTGGGCAG
CTTTTGCAGGGATTCCGCCCAGGCCCCCAAAGCCTGCACTCCACCCCTTA
TTGCTCGGCAAAAAGTTGAGGTGAAACGCTCGGGTTTTTTTTTATTCGTT
GATTTCTTCACACTAAATCGGTATTTTATCAAGTTTCGTTGGTCACCCTG
CAAAATAAAAAATGTATTATCCCAGACTTTTTTTGCACATTTACGGTGCT
GTAGTCCCCAAAGGGTCAATGTCATATCCTGGTGCACAGCTTTATGTGGC
ACACACCTTGGCGCACAACAGCGAGTCACTCAGGGTGTTGCTTTGTGTTT
TGTATTCCGATCTGTGGATTGCTGCAATTGTGGTGCGCAAAATCACGCCA
ACTTTTGTATGCTGCCTGCGTTTCTATGGAGTGCTGCAGCTGTCTCAACA
GTGACAGCTCCCTATCTCTTCGATGGTGTGAAAAGCGTTGAGTTACGGAA
AATTCACAACTATTTTCCCAGGTGGGGATTAGACCGGGACCAGCACCAAA
GGGTCAAAAATCCATGATAGATATTGGGGGTAAATCTGTCTGTTATGATA
CCTCACACCCAAATTGATATTTCGTTGGAAAGGTGGGGAGTAGGAGAGTT
AACGGGATATTTCCGGAGGATATTTTTTGCAGTTTTCAGGTAAGCTCCAA
AAAATCTTTGACGGATACGAACTCATGCTAGGACAGCCAGTGCAATATGA
CACTTTTGGCATAAAAATAAAAAATAAAAAGCTGACCATTTAAGATACAT
CTTGCGAAATAGTCAATTACACCCGACCTGAGACATGCCAGATCCTGTAA
TTTGGCAGCAAATGTTGCTGAAAGGGTTTACGCCACGTGTCAAAATGGAG
GATAAATACTGATGGGAAGAAAACCAATGTATCTACGTATTTTCGGAACA
ATAATGAATGTACCCCGACGACACTCGACCGCGTCGTATTTAACCAAAGA
CGCCTTCTTTTGCCAACGTTGTTTTTTCAATAAATTGTTCATGCTATTGG
AAGATGGCATGCAAATTTGAGACAAATCGGAGTCAATGACGATAGTAGTC
TCGTCGGTTTTGTAAAAAGTAAAGTAATTTTTCGCCTTGCCGTGAAAAAA
ATGCAGTCATGTGAAAAAAATGTGCAGTCAAAATCTTTTGACAACTAAGG
TGGTGCTTCATGATATCATACTAAAATGAAAACAACTTGTTTTGTCGAAA
TTGTCCTCGGAATGTCTTGTACATACTACTGGGAGACTGCCTCTAAGATG
CAAGATGAATCCGAGTCGATCCCGACACACTCCAGCCCTTGGCTTCTGAT
AATCTGAGGTATTCCCACCTTACCCTACACAAACATTCAGTCGTTTCTGC
GGCCAAAATCGCCATGTAGAAATGTATACATTACTGTTGGTGTGACGACT
TGGAAATGGACTCATCACTTGACCAACGAGTCCAAAGTACTGTGATTTGG
TCAAGAACATTGCAATGAACTTTCCCGCACGGTTTTAGCTGCCCCAAAGG
CGGGTGTCACGTGTCATCCGTGGCCCACTCCTTTGAAAAATGCGATTTTT
TAAAGGCACGAATTGCGCAATTTGTAGTGCAATTCCCAAGGTTTCGCGAC
GATGGTAGAATCGTTTGGAGTGCTGAGAATATCAAACGACGCGGCTTGCT
CACGTGAACACTTCGATATCACAAGGGGTCCCCTCGGTAAACTTACCGAG
TAACGTGGAGGGTTATTGAAACGCGCACAACAAGACTGTTTTTGAGAATA
TTGGATTTTCGAAAGTACAACGGCAAACAGAGATTCTGCGGGAGGGGAAA
TCGCGAGGGTAATTTCCTCAAGTCTACGTGACTACCGTGTTTGCACGAGT
GTTACAGTGCGCGGTAATTTACCGCAGTAAAGTAAATCTTGATAACCGTG
AAAATTACCGTGGCCATAACAACGTCATCACGTGGTCTTTAGAAAAATAA
GACCGACAAATGTTTCCCATGGGGCGTGACTTCATCATGGTGCTTTGAAG
ACGTTATTTAACTGGACAAGACTTGCCATTTACTAAAAATATTTGTATTC
GCTAAGTTTACCGAGGGTACCCCCAGGTAAGAACAATGTGAAACATTGTC
AAGTTCTGGCGAAGATAGAGGCAAAAAGCATGTTTACATGTATGAATCAA
ACATAGAAACATTTTAACCTTAGACATCACTACCCTTGCTACGTTTCGTT
CAAAACGTTCAACTGAACGACTTATGCGACAGACCAGGTGTCCTCGGCCG
TAAATATAGCACTGGATCCATTCATTAACTTTCAGTTACGGTTGCAAGTA
TGTACATGAATTAAAGGCTAAGTGGATGATATTTCGTCTCTGTCACGAAT
GCCGAACACACCTGCCGTATCGTGTCGTGCTACGTTATAACAGTTAACGG
TCATCACAATCTCAGATCACTACACGCGAGTCTCCACAGGTGGGGGTGCG
CAAGAGGCGGGTGGTCGCGTGATCGGCTTATTATTCGGGTCGCAAAATGG
ATTGGATGTTAGCATCTACGATGCCGTGGAGGTGGCATGTACTGCCGCCG
GCGATGATGGCGTGGAGCTAAATGAAAGCGTGGTCGAGAAACAGAAGGAT
CTCTGTAAGTTGAAAAACAGTGGTCTATCAGTCGTTTGTATGTTGCCGAG
GCACTCTTTACTGAGTGTGGCATATCCTGACATGTGTGGGTCGAGCATTT
AGGAGTACATAGTGGTGCTGGAGAGGGCATGTTTTCAGGATGTTGAATTA
GTCGTGAACAACTACTGATTCCCCATGCTCCGCAGCTTATAGGCATGGAC
AACCGTCCTTTAAAGCATGAGAGCTAGATGCAATGCGCGGTGTGCTGCAA
AGTCGATTATTTGGAAATGGATCACCCCCCGGACAAATGCGAATACTTGC
AAATGATTTTCACAAAAAACTGAAAATGTTCGACTGAGTTTCAGAATGAG
CGGACACGTAGAATAGAGTATCCACTGCTATTCGTTCGATTTACGAACAT
TATTAGCAATCGTGGATGGTCCGCGGCACATAAAACACACGAGCTCATTC
TGAAAATTTGGTGAATACTTTCAGTTTTTTGTGAAAAGCACTTGCAAGTA
TTCGTATTTGTCCAGGGGGTGAAATGGATGCATAGCTGGCTGTAAACACC
ATCTGTTATTTTTTGGACAAAACGCACAGCTGGATATGAAATTGTTTTTT
TTCGGTACTGTGGACATGGTCGTGTCCTAGCGCATCTCAGTTTAGCGTGT
CACTCCCTCTATATGAGGAGAAATATGTCTTTCTCAATTCCATTTCTTCA
GATTGTTGCAGCACACTAAACTCTAAAACGAAGGTAACGACCGGTGGCAT
CGACATTCGACTGTTGTACCGCATCTAATAATCGTTCGCCGACTATCTGC
TGTCTTCATGTGTATATTTGTCCGCAAAATCAAAATACTAAATCGTTAGA
GGATTTGTTTGGGCTGATGTAGACATTTTAAAAAAACGACGTGAAAAAAG
TTGATGACGACTTCGAAATATGAGGCTTTGAAGTTTCACAGACGCTAGTA
AGTATTATGTGTGACAAAGGGTCACGCCGTTGTTCTATGTGCACTTCACA
GACTGAATCCTGTGGCGGGCCGTGACTATATCAGTCTGCGGTGCTGCTAG
CCCGCACTAACGTAAATTCAAGCGGTCGTCCAGACCCGTTATTATATGTC
TGCAGTGCACCGTTCCACGCGAACTGTGCCTCCATATATAGCAATGACTC
CCATAGCTACGGGGATCTGAAATGATGCAGTTCTTTCAAGTCTTCTTGAC
GCCGGTTATTTGGATAGGAGGTTGCTGATACCCGAATCACCGACACCCAA
AAATGTTCATGACTATCTATTTTATGGTTTCACTCACTAGAGCCTCAACC
TGTCCTTGCCCCTGCTGGCGTTGCCTATTGATCGTGCAGACACCGCGGTG
TACCCAATGTACGAAATCCTCGGTTGGTACACGGTGGGCACAGCAGCGAC
GGAGTTTGATCTGAAAATACAACGCCAGGTACGCCTGCTACTTGACTTAC
GTATGGACCGACGCCGTCGGGGACGAACCCTCAAAGTATCCAAAGAGAAA
TATGGCATTGAGGTCTCAAGGCTTCTCACCTCGTAGCACTGTCCTGTCGG
TAAAGTAGTCTTCCTAGTTTACGCGTGGTTTGTAATATATATATATATAT
ATATATATATATAAGTAGAGTCAGCACTGTTCAATCTCTCTTCGAAAGTG
TCGAAGTTGAATAGGAGGAGGGTCCTGTTGTTTGTCTTTGCTGGGTGAGC
ATTTTTTAAGATTTGTCTTGAAATTCGGCTAACAGCTAGGGAAGAGTGAG
TAATGCAGTGCCAATTCTCGCATAGCACACGCACGTTTATACTTTCCCGT
CATATCCTTTTTTTCCCTTGGTGCTGTTGGGTGGCAGATGATGAAGTTCA
ATCAGGCGCCATTGTTCTTGCTCATGAACCCGAAGCCAGCACAGGGGTCC
AAGGAACTCCCGGTCTTGATTCACGAATCAGAGGCACACACTCTGGATGG
CCAGTCAAAAATGATATTCGTGCAGCTAGCGTTTCAGGCGAGTAAAATGG
AAAACCTACGCCGTTGCAGGCCATACATGTTGCAGCTATGTGATCTTGTA
ATTTTTTCATTCTTCTGGCTCTCTGGCTCTCTGGCTCTCTCGCGGTCTCG
CTCGAGTCAAGGAGCGTCGCCTTCTCACTTGGATCTTCGTGGTTCTCCAT
ACTTGTGCGAGGAGCTGTTGAGCGTTTAGGGTAAGAGCACAAGAACGTTC
GAAAGCGCAAGATATGCCATGTCACAATTTTATCACATAATCGCCACCCC
GAGACGGAATCGGAGACAATGGTGTCAACGGTGTTAAGCACGCTTGACTG
GCTGCAAACTCAACCCAGAACGCGTTGTGGTGAAAGGTGGAAGATGGTTG
TCGTCTTCACAGCGTTCCACGCGGTGCCCACGGGCGAATAGCTCTGTTCT
CAATTGCAGCTGTCCTCTTTTTTCTCTTATCTACACTCCTTGCTTGATTT
TGCAGCTAGAGACTACACAGGCAGAGCAGATATCTGTAGAGCACGTGGCC
AAGGCCACGCCAACGGACGGCATTTCGTCAAGTGAGTTTGTTACTGTTTG
TTCTGTTGAAAGGGGTGTGATTGCGGCATTTCTATCAACGCAAATGCGGG
TTTCTAACAACGTAATCGGCAGAACAAAAACCTATGCTAAACCTTGCAGT
ATTCGTAACGTTAGCTGCGGCTCTGTGAGATAGCATATCAACGAACGACA
AAATACAAACGTTGCACCTGGTGTATCGATTTATCGATGGAATACCCGCA
GCGTCGGCACGTCCAGCCTGCCGTTGTCAGAAAAGCTGGCCAACGAGAAA
CAACGGCTTCTCGAAAGCTCCTTGCATATGGTTTTTCACTCAGTGAGGAG
CGATAATGGGACCTGTTATGTTGATCACTTGAGCACAATCGCTCGCGTAC
CTTCTTTCTCTTTCCCCATCCCCACAGAACGATGGCCGGCGTTAACCCAT
TTCTACCCTTTCAGTTCGTGTCTACTCGTTTATCCATATGTCCTAGTTTT
TAACATACACGCTTTGCCGTCCGATGCGTATGGAAGCTACCTGATTTGTT
TCGTATGAAATGGATTCTTGTACAGTATGGTTTCCAACGTAGGGAAGACA
TCCGGAAGGGGCGACCTGCAGTGCCCGATGGCGAGCTATCTATTGTCTTT
CTTTTGTTATATATATTTATTCAGCGTTACCGAAACACGGGCAACGTATG
GTCACAATGCGTTGATATCTCCTGGTGTTCTCTTGTTATTGTCATTGTTG
TAGTTGACCTGCATGCAGGCGCGGTGAGTACATCACTCAAGACCCTGCTC
GCCCGGATTCAGATTCTGGAGAGATTCCTCCAGGAGACCAAGAACGGTGA
GTGGCCTGATCTTCGTGGGTCGGATCTGCTTGCCATAAGTGCGACCAAAT
ATGTCATCGTTGTTTTATCTGAGTCGCATTTTTAGTTACGTTTGATCAAA
GGGAGGGCTGTCTCTACACGAAGTGATGTGTCCACTGTAATTATATGTTA
TAGCATGTCAAGATTGAGTGTACTCGAACGACTTCAGCCCGTGATATACC
GATGGTGTACATTGACACGTTGTCTGCTTAGTGCAATTGACCCAATATTT
TTCCAACCGTGTCAACACTTGACTCAAAATAGCCGCCTGCTATGTTTCAT
CCTGTACGCCACACGGTAGTCCCCTTGTCGCATCACCAATCGCTGTCTTT
GCGCGCTCGTTTTCATTCTTTTCTTGTTTTTCGCAGGTCAAGTTGTTGTA
GACTATCCGCTTTTGCGACAGATCTCGAGCATCTGCAATCAGCTCCCAAC
CATGGACGGTGAACAGTTCTCTGAGGAGTTTATGCGGGTGGGCGTTTTTC
TCGCGACTTATAGACTGCGACTGAGTGTTTTGCGCCTCATCCTTCATTGC
GCGAGAGTCTTGTTGGAGACAAATATGTGCTTGATGACCCCACGATTCTT
TGTGCGAGATTATATTGTTGATCAAGCAGGAATGAAATAGGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig1253:237..8279+

>mRNA_H-paniculata_contig1253.1590.1 ID=mRNA_H-paniculata_contig1253.1590.1|Name=mRNA_H-paniculata_contig1253.1590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2016bp|location=Sequence derived from alignment at H-paniculata_contig1253:237..8279+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTTCTGCAATGGATGTGGACGCTGGGGCTGGCGTGGAAGAGGCCAA
GGGAGAGGTTGTTCCTCCTGCTGGAAATGGCGCAGGAAACAAGGGACAAA
AGGGCGAGGGCGACCGCAATGTGATGCTGCACCCGATGTCTTCTGCAATG
GATGTGGACGCTGGGGCTGGCGTGGAAGAGGCCAAGGGAGAGGTTGTTCC
TCCTGCTGGAAATGGCGCAGGAAACAAGGGACAAAAGGGCGAGGGCGACC
GCAATGTGATGCTGCACCCGTTAACGGTCATCACAATCTCAGATCACTAC
ACGCGAGTCTCCACAGGTGGGGGTGCGCAAGAGGCGGGTGGTCGCGTGAT
CGGCTTATTATTCGGGTCGCAAAATGGATTGGATGTTAGCATCTACGATG
CCGTGGAGGTGGCATGTACTGCCGCCGGCGATGATGGCGTGGAGCTAAAT
GAAAGCGTGGTCGAGAAACAGAAGGATCTCTTTAACGGTCATCACAATCT
CAGATCACTACACGCGAGTCTCCACAGGTGGGGGTGCGCAAGAGGCGGGT
GGTCGCGTGATCGGCTTATTATTCGGGTCGCAAAATGGATTGGATGTTAG
CATCTACGATGCCGTGGAGGTGGCATGTACTGCCGCCGGCGATGATGGCG
TGGAGCTAAATGAAAGCGTGGTCGAGAAACAGAAGGATCTCTACACCGCG
GTGTACCCAATGTACGAAATCCTCGGTTGGTACACGGTGGGCACAGCAGC
GACGGAGTTTGATCTGAAAATACAACGCCAGACACCGCGGTGTACCCAAT
GTACGAAATCCTCGGTTGGTACACGGTGGGCACAGCAGCGACGGAGTTTG
ATCTGAAAATACAACGCCAGATGATGAAGTTCAATCAGGCGCCATTGTTC
TTGCTCATGAACCCGAAGCCAGCACAGGGGTCCAAGGAACTCCCGGTCTT
GATTCACGAATCAGAGGCACACACTCTGGATGGCCAGTCAAAAATGATAT
TCGTGCAGCTAGCGTTTCAGATGATGAAGTTCAATCAGGCGCCATTGTTC
TTGCTCATGAACCCGAAGCCAGCACAGGGGTCCAAGGAACTCCCGGTCTT
GATTCACGAATCAGAGGCACACACTCTGGATGGCCAGTCAAAAATGATAT
TCGTGCAGCTAGCGTTTCAGCTAGAGACTACACAGGCAGAGCAGATATCT
GTAGAGCACGTGGCCAAGGCCACGCCAACGGACGGCATTTCGTCAACTAG
AGACTACACAGGCAGAGCAGATATCTGTAGAGCACGTGGCCAAGGCCACG
CCAACGGACGGCATTTCGTCAATTGACCTGCATGCAGGCGCGGTGAGTAC
ATCACTCAAGACCCTGCTCGCCCGGATTCAGATTCTGGAGAGATTCCTCC
AGGAGACCAAGAACGTTGACCTGCATGCAGGCGCGGTGAGTACATCACTC
AAGACCCTGCTCGCCCGGATTCAGATTCTGGAGAGATTCCTCCAGGAGAC
CAAGAACGGTCAAGTTGTTGTAGACTATCCGCTTTTGCGACAGATCTCGA
GCATCTGCAATCAGCTCCCAACCATGGACGGTGAACAGTTCTCTGAGGAG
TTTATGCGGGTGGGCGTTTTTCTCGCGACTTATAGACTGCGACTGAGTGT
TTTGCGCCTCATCCTTCATTGCGCGAGAGTCTTGTTGGAGACAAATATGT
GCTTGATGACCCCACGATTCTTTGTGCGAGATTATATTGTTGATCAAGCA
GGAATGAAATAGGTCAAGTTGTTGTAGACTATCCGCTTTTGCGACAGATC
TCGAGCATCTGCAATCAGCTCCCAACCATGGACGGTGAACAGTTCTCTGA
GGAGTTTATGCGGGTGGGCGTTTTTCTCGCGACTTATAGACTGCGACTGA
GTGTTTTGCGCCTCATCCTTCATTGCGCGAGAGTCTTGTTGGAGACAAAT
ATGTGCTTGATGACCCCACGATTCTTTGTGCGAGATTATATTGTTGATCA
AGCAGGAATGAAATAG
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