mRNA_H-paniculata_contig1251.1578.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: D8LNM1_ECTSI (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM1_ECTSI) HSP 1 Score: 370 bits (949), Expect = 6.940e-127 Identity = 191/249 (76.71%), Postives = 206/249 (82.73%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKVLDVAGGTGDIAFRMADQLRPYL--------TSYKERPSE----HDGADGD----DTPFLTVSDINPDMLQVGRQRAADRFSSATLDAMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMFPG 699 +QVPS KKGMVK VF+SVAHNYDVMNDLMSAGMHR+WKDEFV+ML IS G+ AGSP PKVLDVAGGTGDIAFR+ADQLRPY+ T ER E DGA D + P LTVSDINPDML+VG QRAADRFS L M+FVQADAEALPFEDN+FHLYTIAFGLRNVT+ DKALREA RVLKPGGRFMCLEFSRVPI+ LQKAYDWYSFNVIP IG+VVA+DRDAYQYLVESIRMFPG Sbjct: 55 QQVPSEKKKGMVKSVFTSVAHNYDVMNDLMSAGMHRIWKDEFVDMLRISPGFEAGSPAPKVLDVAGGTGDIAFRVADQLRPYMAGSPAGKGTGEGERGGEGEVRQDGAAADAMDSNVPLLTVSDINPDMLEVGEQRAADRFSPEILTNMQFVQADAEALPFEDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPTIGQVVAKDRDAYQYLVESIRMFPG 303
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: A0A835Z8S3_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S3_9STRA) HSP 1 Score: 288 bits (738), Expect = 8.490e-95 Identity = 148/232 (63.79%), Postives = 170/232 (73.28%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKVLDVAGGTGDIAFRMADQLRPYLTSYKERPSEHDGADGDDTPFLTVSDINPDMLQVGRQRAADRFSSATLDAMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMFP 696 +QVP KKGMVK VFSSVA +YDVMNDLMSAG+HRLWKDEFV MLG+ AG PP+VLD+AGGTGDI+FR+ +++ PYL D D P +TVSDINP ML+VG +RAA RFS L A+ F ADAEALPFED + YTIAFGLRNVT+ +AL EA RVL+ GGRFMCLEFS V LQ+ YD YSF+VIP IG VVA D+ AYQYLVESIRMFP Sbjct: 50 KQVPESDKKGMVKGVFSSVAKDYDVMNDLMSAGVHRLWKDEFVRMLGVKEALQAGDSPPRVLDMAGGTGDISFRIIEEMSPYLRQ-----------DQGDEPIVTVSDINPKMLEVGEERAAKRFSGRALSALEFRVADAEALPFEDGAYDAYTIAFGLRNVTDVPRALAEARRVLRRGGRFMCLEFSHVNNPMLQRLYDAYSFSVIPKIGAVVANDKPAYQYLVESIRMFP 270
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: A0A0F2R8C3_9PROT (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Rhodospirillaceae bacterium BRH_c57 TaxID=1629718 RepID=A0A0F2R8C3_9PROT) HSP 1 Score: 246 bits (629), Expect = 7.320e-79 Identity = 134/232 (57.76%), Postives = 159/232 (68.53%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKVLDVAGGTGDIAFRMADQLRPYLTSYKERPSEHDGADGDDTPFLTVSDINPDMLQVGRQRAADRFSSATLDAMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMFP 696 R V + KKGMV++VF SVA YD+MNDLMSAG+HR+WK F+E W A P ++LDVAGGTGDIAFR D GAD + +TV DIN +ML+VGR RA D+ L + +V+ DAEALPFEDN+F YTIAFGLRNVT+ D+ALREA RVLKPGGRFMCLEFS V + L YD YSF V+P +G+VVAR+RDAYQYLVESIR FP Sbjct: 21 RTVRAADKKGMVREVFDSVAERYDLMNDLMSAGVHRVWKARFIE-------WLAPRPGMRLLDVAGGTGDIAFRFLDAAGKR------------GADPE--THVTVCDINEEMLKVGRNRAVDK---GILGGIEWVRGDAEALPFEDNSFDAYTIAFGLRNVTDIDQALREARRVLKPGGRFMCLEFSHVVVPGLDAVYDVYSFQVLPRLGQVVARNRDAYQYLVESIRRFP 228
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: A0A5A8EG61_CAFRO (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EG61_CAFRO) HSP 1 Score: 245 bits (626), Expect = 5.960e-78 Identity = 137/235 (58.30%), Postives = 158/235 (67.23%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKVLDVAGGTGDIAFRMADQLRPYLTSYKERPSEHDGADGDDTPFLTVSDINPDMLQVGRQRAADR--FSSATLDAMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMFPG 699 R+VP KK MV VF SVA YD+MND MS +HRLWKDEFV MLG S P + LD+AGGTGDI+FR+A+ LR S +P + + VSDINP ML VG QRA + L AM FV+ADAEALPFE +TF YTIAFG+RNVT+ D+AL EA RVL+PGGRFMCLEFSRV L AYD YSFNVIPA+G+ V DRD+YQYLVESIR FP Sbjct: 39 REVPEDDKKAMVGGVFHSVADRYDLMNDFMSGTLHRLWKDEFVSMLGPVESPDP-SDPVRYLDMAGGTGDISFRIAEALR----SRSGKPVAAE---------IVVSDINPSMLGVGEQRARSKGLLDGRGLPAMSFVEADAEALPFESDTFDSYTIAFGIRNVTHVDRALAEAFRVLRPGGRFMCLEFSRVRNPVLAAAYDAYSFNVIPAVGQAVTGDRDSYQYLVESIRQFPN 259
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: A0A6H5K315_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K315_9PHAE) HSP 1 Score: 243 bits (620), Expect = 1.270e-77 Identity = 132/202 (65.35%), Postives = 149/202 (73.76%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKVLDVAGGTGDIAFRMADQLRPYLTSY----------KERPSEHDGADGD----DTPFLTVSDINPDMLQVGRQRAADRFSSATLDAMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFS 564 +QVPS KKGMVK VF+SVAHNYDVMNDLMSAGMHR+WKDEFV+ML IS G+ AGSP PKVLDVAGGTGDIAFR+ADQLRPY+ ++ + DGA G+ + P LTVSDINPDML+VG QRAADRFS L M+FVQADAEALPFEDN+FHLYTIAFGLRNVT+ V + GGR L FS Sbjct: 55 QQVPSEQKKGMVKGVFTSVAHNYDVMNDLMSAGMHRIWKDEFVDMLRISPGFEAGSPAPKVLDVAGGTGDIAFRVADQLRPYMAGSPAGDATGEGEEQGGVQQDGAAGNAIDSNVPLLTVSDINPDMLEVGEQRAADRFSPEILTNMQFVQADAEALPFEDNSFHLYTIAFGLRNVTD----------VREEGGRTKALVFS 246
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: W4GFN2_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFN2_9STRA) HSP 1 Score: 241 bits (614), Expect = 3.230e-76 Identity = 133/234 (56.84%), Postives = 159/234 (67.95%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKVLDVAGGTGDIAFRMADQLRPYLTSYKERPSEHDGADGDDTPFLTVSDINPDMLQVGRQRAADRFSS--ATLDAMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMFP 696 +QV + KK MV VF SVA +YDVMND MS GMHRLWKDEFV MLG P ++LDVAGGTGDIAFRMAD+L+ R D DD + V DIN ML+VG +RA R T + +V+ DAE L FEDN+F +YTIAFG+RNVT+ DKAL EA RVL+ GGRFMCLEFS+V L+ YD YSFN+IPA+GE++A+DR +YQYLVESIR FP Sbjct: 32 QQVDEHDKKPMVAGVFHSVADSYDVMNDAMSGGMHRLWKDEFVNMLGPLP--HRNGEPLRILDVAGGTGDIAFRMADRLK--------RAGLPDSPTDDDRTDIVVCDINGSMLRVGEERATARGIGLPGTRPSFAWVEGDAEQLKFEDNSFDVYTIAFGIRNVTHVDKALAEAHRVLRKGGRFMCLEFSQVQNPLLRTIYDTYSFNMIPAMGELLAKDRASYQYLVESIRQFP 255
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: A0A7R9UVH4_DIALT (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVH4_DIALT) HSP 1 Score: 238 bits (608), Expect = 3.790e-75 Identity = 128/235 (54.47%), Postives = 162/235 (68.94%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKVLDVAGGTGDIAFRMADQLRPYLTSYKERPSEHDGADGDDTPFLTVSDINPDMLQVGRQRAADR--FSSATLDAMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMFPG 699 R VP K MV +VFS VA +YD+MND+MSAG+HR+WKD FV+ +G+ +A S +VLDVAGGTGDI FR+AD L S + R +TV DIN DML+VG QRA R A+R+VQ DAE LPF+D++F +Y+IAFG+RNVT+ KALREA RVL+PGGRF+CLEFS+V + L+ YD YSF +IPA+G +VA DR++YQYLVESIR FP Sbjct: 46 RDVPQADKAKMVGEVFSRVADSYDLMNDVMSAGVHRVWKDHFVDGMGLPAINAASSTGVRVLDVAGGTGDITFRIADALAADGPSARARAE------------VTVFDINADMLRVGEQRAGARAQLQRPGAPALRWVQGDAETLPFDDSSFDVYSIAFGIRNVTDVPKALREARRVLRPGGRFVCLEFSQVQPRILRALYDEYSFRMIPALGALVANDRESYQYLVESIRKFPA 268
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: A0A2D4BYL6_PYTIN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYL6_PYTIN) HSP 1 Score: 237 bits (604), Expect = 9.010e-75 Identity = 134/234 (57.26%), Postives = 154/234 (65.81%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKVLDVAGGTGDIAFRMADQLRPYLTSYKERPSEHDGADGDDTPFLTVSDINPDMLQVGRQRAADRFSSATLDAM-RFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMFPG 699 +QV KK MV VF VA YDVMND MS GMHR+WKD F++ L G P VLDVAGGTGDIAFRM +LR D +T+ DIN MLQVGR+RAA F A DA+ R+ Q DAE L F DN+F +YTIAFG+RNVT+ D+ALREA RVL+PGGRF+CLEFS VP L+ YD YSFNVIPA+GE VA DRD+YQYLVESIR FP Sbjct: 45 QQVKEEDKKPMVASVFHRVAERYDVMNDFMSGGMHRVWKDAFIDTL-----HPVG--PLDVLDVAGGTGDIAFRMGRRLR------------------DSGSTITICDINSSMLQVGRERAARMFPDA--DALFRWEQGDAEQLQFADNSFDVYTIAFGIRNVTHVDRALREAYRVLRPGGRFLCLEFSHVPNPLLRAVYDAYSFNVIPALGEKVASDRDSYQYLVESIRQFPA 251
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: A0A7S4I811_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I811_9STRA) HSP 1 Score: 239 bits (609), Expect = 9.300e-75 Identity = 134/247 (54.25%), Postives = 164/247 (66.40%), Query Frame = 1 Query: 22 KKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSA--------------GSPPPKVLDVAGGTGDIAFRMADQLRPYLTSYKERPSEHDGADGDDTPFLTVSDINPDMLQVGRQRAADRFS-SATLD--------AMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMF 693 K+ V++VF SVA +YDVMNDLMSAG+HRLWKDE + M G++ A P +LDVAGGTGD+AFR + ER + G D +TV DIN +ML+VG +RA DR+ SA LD A+RFVQ +A+ LPF+D +F +YTIAFGLRNVT+ D ALR+ALRVLKPGGRF+CLEFS+VP L YD YSFNVIPAIGEVV +DR++YQYLVESIR F Sbjct: 69 KESKVREVFESVADSYDVMNDLMSAGLHRLWKDELIAMTGVAGMAKAVRRRTVASSLVGDNQKPQLSILDVAGGTGDVAFRFYE-----TAGCPERAL----SSGSDEISVTVCDINSEMLKVGERRARDRYGDSALLDGDGTHSAGALRFVQGNAQCLPFDDESFDIYTIAFGLRNVTDVDMALRDALRVLKPGGRFLCLEFSKVPNPVLSTLYDSYSFNVIPAIGEVVTQDRESYQYLVESIRKF 306
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Match: A0A7S3M517_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M517_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.350e-74 Identity = 125/234 (53.42%), Postives = 159/234 (67.95%), Query Frame = 1 Query: 1 RQVPSYAKKGMVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAG-SPPPKVLDVAGGTGDIAFRMADQ-LRPYLTSYKERPSEHDGADGDDTPFLTVSDINPDMLQVGRQRAADRFSSATLDAMRFVQADAEALPFEDNTFHLYTIAFGLRNVTNTDKALREALRVLKPGGRFMCLEFSRVPIQSLQKAYDWYSFNVIPAIGEVVARDRDAYQYLVESIRMFP 696 + V + K+ MVKD+FS VA YDVMND+MS G HRLWKDE + M+GI+ A S P+ LDVAGGTGD+AFR +Q L Y S + P + + V DINPDML+VG+QRA + L+ + FV+ +AE LPF D +F LYTI FGLRNVTN DKA+REA RVLK GGR M +EFS V + +AYD +SF+ IPA+G+++A DR++YQYLVESIR FP Sbjct: 52 KDVDADEKERMVKDIFSKVADKYDVMNDVMSFGTHRLWKDELISMMGINAAARANPSYVPRHLDVAGGTGDVAFRSLNQILSSYGNSARSLPVSEQATEKQ----VVVCDINPDMLRVGKQRAEKLYKGDELNLIGFVEGNAEQLPFPDESFDLYTIVFGLRNVTNKDKAIREAYRVLKKGGRMMVMEFSHVTNPLMAQAYDQFSFHAIPAMGKIIANDRESYQYLVESIRRFP 281 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1251.1578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1251.1578.1 >prot_H-paniculata_contig1251.1578.1 ID=prot_H-paniculata_contig1251.1578.1|Name=mRNA_H-paniculata_contig1251.1578.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp MVKDVFSSVAHNYDVMNDLMSAGMHRLWKDEFVEMLGISTGWSAGSPPPKback to top mRNA from alignment at H-paniculata_contig1251:18005..21488- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1251.1578.1 ID=mRNA_H-paniculata_contig1251.1578.1|Name=mRNA_H-paniculata_contig1251.1578.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3484bp|location=Sequence derived from alignment at H-paniculata_contig1251:18005..21488- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1251:18005..21488- >mRNA_H-paniculata_contig1251.1578.1 ID=mRNA_H-paniculata_contig1251.1578.1|Name=mRNA_H-paniculata_contig1251.1578.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1344bp|location=Sequence derived from alignment at H-paniculata_contig1251:18005..21488- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |