mRNA_H-paniculata_contig1251.1577.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: D8LNM0_ECTSI (Protein atp11, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM0_ECTSI) HSP 1 Score: 302 bits (773), Expect = 6.820e-92 Identity = 149/223 (66.82%), Postives = 173/223 (77.58%), Query Frame = 3 Query: 99 AFTIGKSKTLW--ACSRTPRSLPRSWIPNGHKKGIFQGVPRSGQRGLSFSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWRDEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTPNITKKEVARLIRLLIRFYSPHAHHHVEAFNLRPEEFDLDKLMKDTPRE 761 A GK+ LW A +R +P + G +R LSFSFPGPRKL +IT LPLL KE E I++IW AYHDER D+ GT +PGD+L LQAKAKKCP+FVLPVWRD GHFMML+QYQD CFLLT+LEDYKVNP GA PYATISMY+DLV +KGLGLIR D+TPN+TKKEV RL+RLLIRFYSPHAHHHVEAFNLRP+EFDLDKL+++TPR+ Sbjct: 6 AACYGKT-LLWSRAAARPHSVVPAAAKTMAAATGARAARVSQARRELSFSFPGPRKLEDITNLPLLAKEEKESIADIWTAYHDEREDSLGTVIPGDSLDGLQAKAKKCPMFVLPVWRDGGHFMMLSQYQDKCFLLTYLEDYKVNPGGAQPYATISMYNDLVDSKGLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHHVEAFNLRPQEFDLDKLLQETPRD 227
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 200 bits (509), Expect = 3.730e-53 Identity = 106/240 (44.17%), Postives = 144/240 (60.00%), Query Frame = 2 Query: 2252 SIADAPKEPGR-FILDKAARDRITFRNGIQTIHINEAWFYLIRDRDRVRMFLGEERIGSTEVQHKNYIPKMMFICAVSRPDPSHEFDGKIGIWRVCIIKQT*RNS----------ARRGWGQ-------------QYEFDVTIEAEWYQG*YKDSFLPALKENMPELEGEEVNAQQDGANPHTEKHTPRKLNKLGRDGEWDVNLVTQLSQSPDLNINDLGLFTCVKSTVWKKRHGTIDGL 2899 S++DA K FI D+ + + +H++E+WFYL+R++++VR+F GE+ G V H++++PK+M I A +RPDP+H+FDGKIGIWR+C+I+ R+S R GW + +YEFD TI+AEWY+ Y D LPA+KE MP L + V QQDGA+PHT K P LN G W V LVTQ +QSPDLNINDLG F +K VW +ID L Sbjct: 124 SLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDEL 363
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A836CMH7_9STRA (ATP11 protein-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH7_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.920e-45 Identity = 96/218 (44.04%), Postives = 132/218 (60.55%), Query Frame = 3 Query: 141 RTPRSLPRSW---IPNGHKKGIFQGVPRSGQRG------LSFSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWR--DEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTPNITKKEVARLIRLLIRFY--SPHAHHHVEAFNLRPEEFDLDKLMKDTP 755 R+ RS RSW G G + VP +R LSFS+PGPRKL EIT LPLLEKE +S+IW +HD R D G L G L +L +AK+ P+F+ PV R D G+FM+L Q+Q + FLLTFL+DY+ NP GA PY ++S++ DL +KG+GL+R D+T +++ E R++ L+ R+Y S + V AFN P EF+ + M P Sbjct: 14 RSTRS--RSWGFFEAGGAYAGNWAAVPACSRRPWQQCRHLSFSYPGPRKLSEITNLPLLEKEEPAIVSDIWRQFHDARKDAIGATLSGAELQELLKRAKESPMFIFPVHRGADGGYFMLLCQFQGSHFLLTFLDDYRTNPSGAQPYMSVSLFSDLAESKGVGLVRADVTAQLSRAEGVRVLDLMQRYYIGSEELYGMVRAFNHAPAEFNFEVYMSTVP 229
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A7S2DR12_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DR12_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.580e-42 Identity = 83/181 (45.86%), Postives = 111/181 (61.33%), Query Frame = 3 Query: 213 RSGQRGLSFSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWRDEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTPNITKKEVARLIRLLIRFYSPHAHHHVEAFNLRPEEFDLDKLMKDTP 755 RS R LSFSFPGPR+L ++ KLPLL+ ES ER+ EIW YH ++ +A AKKCP+F+ PV RD+GHF+ML+Q Q+ LLT+LEDYK +P A PY TIS++DD A KG+ L RGD+ ++ E RL+ L+ +Y V AFN EFD + ++D P Sbjct: 15 RSVSRPLSFSFPGPRRLADVVKLPLLQDESRERVEEIWRTYHSKQDTCIADVWEAGEYKSFRALAKKCPLFIFPVRRDKGHFVMLSQVQEQHVLLTYLEDYKKDPVAAVPYLTISLFDDFAADKGIVLARGDICNTLSLDESQRLLGLMKTYYGGPRQEDVRAFN--KGEFDFEAHLRDCP 193
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A6G0WAK2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAK2_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.760e-40 Identity = 84/194 (43.30%), Postives = 120/194 (61.86%), Query Frame = 3 Query: 207 VPRSGQRGLS---FSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWR------DEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTPNITKKEVARLIRLLIRFYSPHAHHH-VEAFNLRPEEFDLDKLMKDTPR 758 V R G+R +S F FP PR L + KL LEKE+ + I IW YHD++ D G L + L +AKKC FV PV+R +EG+F +L+Q+QD CFLLT L+ Y+ NP A P T+S++DDLV++K L LIRGD+ + K E ++L+ LI+ Y AH+ VE+FNL+P+EF D +++ + Sbjct: 3 VARWGRRAMSTGGFHFPSPRSLQSLVKLDELEKEAPDAIRRIWNDYHDDKTDAMGRVLTQNEFRTLVDRAKKCAFFVFPVYRVNKDTNEEGYFTVLSQFQDKCFLLTTLDAYRENPAQAPPCLTVSIFDDLVSSKELALIRGDVANLLDKDEASKLLDSLIQRYVNDAHYSTVESFNLKPQEFSFDAYLEECKK 196
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A024TLC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLC0_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.720e-40 Identity = 87/204 (42.65%), Postives = 117/204 (57.35%), Query Frame = 3 Query: 189 KGIFQGVPR---SGQRGLSFSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWR------DEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTPNITKKEVARLIR-LLIRFYSPHAHHHVEAFNLRPEEFDLDKLMKDTPRE*KI 770 +GI G R S G F FP PR L + KL LEKE+ + I IW YHD + D GT L L L A+ KKC FV PV+R +EG F ML+Q+QD CFLLT L+ Y+ NP A P T+S+YDDLV++K L L+RGD+ + K E + L+ LL R+ VEAFNL+P +F+ D + + ++ +I Sbjct: 5 RGIQVGWTRRSLSTSSGGGFHFPSPRSLQSLVKLDDLEKETPDAIRRIWGEYHDAKTDALGTSLTATQLDTLTARGKKCAFFVFPVYRTNAETKEEGFFTMLSQFQDKCFLLTTLDAYRENPSQAPPCLTVSIYDDLVSSKELALVRGDVANVLDKPEASELLTALLARYVDDDLFKTVEAFNLKPHDFNFDAYLAECKKKRQI 208
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A485KLM8_9STRA (Aste57867_8902 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLM8_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.860e-38 Identity = 80/185 (43.24%), Postives = 110/185 (59.46%), Query Frame = 3 Query: 216 SGQRGLSFSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWR------DEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTPNITKKEVARLIRLLIRFYSPHA-HHHVEAFNLRPEEFDLDKLMKD 749 S G F FP PR L + KL L+KES + I IW+ YH+E++D L D L L +AKKC FV PV+R + G F ML+Q+QD CFLLT L+ Y+ NP A P T+S++DDLV TK L L+RGD+ + K E + L+ L++ Y + + +EAFNLRP EF+ D + + Sbjct: 2 STSTGGGFHFPSPRSLQSLVKLADLQKESPDAIRRIWSEYHEEKSDAMARVLTADDLKTLMERAKKCAFFVFPVYRVNKDTNETGFFTMLSQFQDKCFLLTTLDAYRENPAQAPPCLTVSLFDDLVETKELALVRGDVANLLDKPEASALLDALLQRYVDNTLYDTIEAFNLRPHEFNFDAYLAE 186
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A1W0ABM0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABM0_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.660e-38 Identity = 79/185 (42.70%), Postives = 112/185 (60.54%), Query Frame = 3 Query: 216 SGQRGLSFSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWR------DEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTPNITKKEVARLIRLLIRFYSPHAHHH-VEAFNLRPEEFDLDKLMKD 749 S +G FSFP PR L I KL L +++ E I++IW YH ++ D+ + +P L ++AK+CP FV+PV+R +EG F ML+Q+QD CFL+T L+ Y+ NP A P TIS++DDL+ TK L LIRGD+ + K E L L++ Y H V AFN RP EF+ D+ +K+ Sbjct: 13 STSKGGGFSFPSPRSLQSIVKLDELSQQNPEEITQIWTDYHADQTDSVASIIPKANFETLISRAKECPFFVMPVYRVNQETKEEGFFTMLSQFQDKCFLITTLDAYRENPAQAPPVLTISLFDDLLTTKELALIRGDVANLLDKPEAQVLFHALLKRYIDDKHFDMVHAFNKRPNEFNFDEYLKE 197
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A8K1CNF2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNF2_PYTOL) HSP 1 Score: 152 bits (383), Expect = 8.420e-38 Identity = 84/218 (38.53%), Postives = 115/218 (52.75%), Query Frame = 3 Query: 117 SKTLWACSRTP--RSLPRSWIPNGHKKGIFQGVPRSGQRGLSFSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWRDEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTPNITKKEVARLIRLLIRFYSPHA-HHHVEAFNLRPEEFDLDKLMKDTPRE 761 S+ L S +P SL R+ P + + G G FSFP P+ L +I KL LL E +I IW YH E+ D L G + L +A+ P F+ PV+R G F ML Q+QD CFL+T+LE +K NP A P T+S++DDL+A K +GL+R D+ + K E +L+ L+R YS + V+ FN RP EFD D E Sbjct: 20 SRVLIRASMSPLAASLRRALAPRALLRSRWLSTEGKGPSGGGFSFPAPQTLQQIVKLDLLVNEEPTQIRRIWEDYHSEKDDAIARVLDGTEYSTLMERARSAPYFIFPVYRQGGFFNMLCQFQDKCFLVTYLEAFKENPALAPPCVTVSLFDDLLAEKDVGLLRADVVNMLDKAETEKLLNQLLRSYSNEKLYDWVDKFNNRPNEFDFDAFRHAIDNE 237
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Match: A0A7S2WHZ0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHZ0_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.190e-37 Identity = 79/200 (39.50%), Postives = 115/200 (57.50%), Query Frame = 3 Query: 159 PRSWIPNGHKKGIFQGVPRSGQRGLSFSFPGPRKLHEITKLPLLEKESSERISEIWAAYHDERADTYGTCLPGDALADLQAKAKKCPIFVLPVWRDEGHFMMLTQYQDTCFLLTFLEDYKVNPEGATPYATISMYDDLVATKGLGLIRGDLTP-NITKKEVARLIRLLIRFYSPHAHHHVEAFNLRPEEFDLDKLMKDTP 755 PR G ++ G PR G FS+P PRKL E+ KL L E+ESSER+ EIW YHD + ++ + + P+F+ PV RD G+F++L+Q Q L T+L+DY+ +P GA PY +++YD+LV++KGL L+RGD+TP + E +RL+ LL FY V+AFN FD + ++D P Sbjct: 2 PRGGERGGSSSSVWLGPPRRAVGG--FSYPAPRKLDEVVKLALFERESSERVEEIWTEYHDSKEFNIAEAWTEKDFRAVEERGRSAPLFIFPVRRDGGYFVVLSQVQGRHILFTYLDDYRRDPAGANPYLVVTLYDELVSSKGLVLVRGDVTPLALDAPEASRLLHLLREFYLDRFDQ-VQAFNAG--NFDFEAHLRDCP 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1251.1577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1251.1577.1 >prot_H-paniculata_contig1251.1577.1 ID=prot_H-paniculata_contig1251.1577.1|Name=mRNA_H-paniculata_contig1251.1577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp MWPRRMTSCAFTIGKSKTLWACSRTPRSLPRSWIPNGHKKGIFQGVPRSGback to top mRNA from alignment at H-paniculata_contig1251:8685..17372+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1251.1577.1 ID=mRNA_H-paniculata_contig1251.1577.1|Name=mRNA_H-paniculata_contig1251.1577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8688bp|location=Sequence derived from alignment at H-paniculata_contig1251:8685..17372+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1251:8685..17372+ >mRNA_H-paniculata_contig1251.1577.1 ID=mRNA_H-paniculata_contig1251.1577.1|Name=mRNA_H-paniculata_contig1251.1577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at H-paniculata_contig1251:8685..17372+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |