mRNA_H-paniculata_contig12502.1571.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12502.1571.1
Unique NamemRNA_H-paniculata_contig12502.1571.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: D7G2L8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L8_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.190e-101
Identity = 177/312 (56.73%), Postives = 221/312 (70.83%), Query Frame = 2
Query:  449 LPDQALVVKCVYISWCAALGCLARLYTDDIGNG-NPALQGSFLSNAIGSFALGILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACGR-LHWR----------GDRSALNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNP--LSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVVGA 1342
            LP + +V KC YIS+CA  G LARLYTDDIG   N ALQGSFL+N+IGSFALG L++S   E     +Y G+TVGFCG+YTTYSGWNLR+AR AL      PSGAIV +V +  SL+FF ACF AG D++K +A+ GR L+ R          GD  A+       +G+LG +Y LLAVLL VD+   RR DW+AC+FAPFGAL+RFFLSR LN+R RGGAFP+GTF ANV G L MAL++YG   +    SGW+++ +K FQ GFLGSLTTMS+F  EV GHR +H+ +ASY+YL ATA+ A  + L+VGA
Sbjct:   63 LPGRPMVAKCAYISFCACFGTLARLYTDDIGPASNVALQGSFLANSIGSFALGALASSPDRETIPDAMYAGLTVGFCGSYTTYSGWNLRIARAALGQVSGAPSGAIVTIVSMATSLAFFAACFSAGCDVMKQIASHGRRLNIRRMLGGGALAGGDSDAVR----NTLGMLGAVYVLLAVLLGVDNNWSRRIDWLACIFAPFGALSRFFLSRQLNSRLRGGAFPLGTFTANVLGSLVMALSFYGTKNSSSLTSGWSNVAIKAFQTGFLGSLTTMSTFMSEVVGHRDRHTPSASYIYLAATAIAAQALVLIVGA 370          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A836C7N9_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.480e-26
Identity = 97/307 (31.60%), Postives = 145/307 (47.23%), Query Frame = 2
Query:  452 PDQALVVKCVYIS---WCAALGCLARLYTD--------DIGNGNPALQGSFLSNAIGSFALGILSASDLNEDT---LPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACGRLHWRGDRSALNIRVGRAMGVLGFMYTLLAVLLIV-----DDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNPLSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVA 1315
            P +  VV  +Y+S   W  A GC AR++T+        D+ + +  L  SF  N  GS  LG L A+            L TG++VG CGAYTT+S W L+   + +      P   I A+  +  S++ FI     G D+   +    +      ++A  I  G    V G +    A+ L +     D+    +  W++ +FA  GA  R+ L+R  N ++RGG FP+GTF AN+ G LA AL  +   K   S W+    + F  GF  SLTTMS+   E+   R  HS     +YL +T ++A
Sbjct:   90 PQEPSVVN-LYVSVALWAIA-GCYARIFTERLFGSTAADVIDADTLLVPSFFDNVAGSMILGFLVAASTTMSKGGGALVLLTGMSVGLCGAYTTFSAWTLQTNALLIAPTSDVPQPQIAALCYIFASIATFIVAHRVGADVGALLTGAVQ------KAAPGISEGIIAIVNGVLLVATAIGLSIALGVNDNSWLEKRYWLSGLFAIPGASLRYALARQFN-KFRGGRFPLGTFLANIGGTLACALVTHEFTK--ASDWDDTAARAFVTGFCASLTTMSTLVNELAILRRDHSVQDGVIYLASTVILA 385          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A835ZHA0_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHA0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.170e-24
Identity = 99/316 (31.33%), Postives = 145/316 (45.89%), Query Frame = 2
Query:  566 SFLSNAIGSFALGILSASDLNEDTLPH------LYTGITVGFCGAYTTYSGWNLRMARVALRHD----VSDPSGAIVAVVGVVVSLSFFIACFVAGTDL--------------VKTMAACGR------------LH---------WRGDRS---ALNIRVGRAMGV-----LGFMYTLLAVLLIVDDRGG-RRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNPLSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVVGAAFG 1351
            +F  N +GS  LG+L A+     T+P       L TG+T GFCGAYTT+S W L+   + + +       DP   +  ++ +   L+ FI     G DL              VK ++A               +H         W G  +   A   RV RA+ +     L      LA+ L +DD    RR  W++ +FA  GAL RF L+R LNA +RGG FP+GTFAAN+ G +  AL  + A  +  + W     + F  GF  SLTTMS+   E+   R    A    VY+ ++ ++A  +A V+   +G
Sbjct:    5 AFFDNCMGSMILGLLVAA---TSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNA-FRGGLFPLGTFAANMLGTICSALIAH-AYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWG 315          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A1Y2FQS7_PROLT (CrcB-like protein-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FQS7_PROLT)

HSP 1 Score: 109 bits (273), Expect = 2.880e-22
Identity = 94/305 (30.82%), Postives = 144/305 (47.21%), Query Frame = 2
Query:  416 QSIRTGRMHLQLPDQALVV--KCVYISWCAALGCLARLYTDDI----GNGNPALQGSFLSNAIGSFALGILSASDLNEDTLPH--LYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSG-------AIVAVVGVVVSLSFFIACFVAGTDLVKTMAAC---GRLHWRGDRSALNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAYY--GALKNPLSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHS 1270
            Q+  + R   Q P +AL V  +C +I   + LG L+RL   ++    GN  PAL     +  +G   +G L    +      H  L+TG+TVGFCG+ TT+SGW L        +  S+ S        AI  +  +  +L+F I  F  G      +A+     RL +    +   + +   + +L     ++AV   VD    RR   +A    P GAL R+ LS++ N R     FP+GTF AN+ GC   AL +     +    +G + + L+G Q GF G+LTT+SSF  E+   + KH+
Sbjct:    6 QATSSERKIPQYPSRALQVIHECAWIGLLSLLGTLSRLALVELNTYPGNLIPALV---WAQFVGCAVMGFLKHDQVFFQPNRHKALFTGLTVGFCGSLTTFSGWLLACFTALSDYGTSEASAGRSTGYNAIGLIAQLTTTLAFSIVGFKLGQHAADGLASIFPKARLTFPQATTRTAVCITALLALLA-QAVVIAVAASVDHTSWRRRYTLALAMTPTGALLRYLLSQLFNHRVLS--FPLGTFNANILGCFLEALFFLLQTVVDRDGAGIHFLALQGLQDGFCGALTTVSSFVSELHTLKRKHA 304          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: E4YWW4_OIKDI (Uncharacterized protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4YWW4_OIKDI)

HSP 1 Score: 102 bits (255), Expect = 7.290e-19
Identity = 92/294 (31.29%), Postives = 132/294 (44.90%), Query Frame = 2
Query:  479 VYISWCAALGCLARLYTDDIGNGNPALQG-----SFLSNAIGSFALGILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACGRLHWRGDRSALNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGC-----LAMALAYYGALKNPLSGWNSI--VLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGI 1324
            V IS  A  G LAR+  D +       QG     SF SN  G F +G+    +L +  +    TG+T GFCG +TT+SGWN + A       +        +VV  +V +  F+     G DL + +     +      S L I +    G+L  +++LL  L         R  W A +  PFGAL R +L + LN  WR   +P+GTF AN+ G      L + L  Y  L   +   N +   L     GF  SLTT+SSF  ++     K  +   YVY+  T +VA G+
Sbjct:   23 VSISIFAFFGVLARIGLDRLAKPIETFQGHPYYSSFFSNLAGCFFIGLFG--NLRKSLIS---TGLTTGFCGCFTTFSGWNHQQALTFFDSSLGTYEKG-TSVVTWIVGMFSFVGALSCGKDLGQKL---NDMKAPDSSSKLLITIRIMFGLLVVLFSLLCGLF-----EETRLIWFATLLGPFGALLRHYLGKNLNG-WRD--YPLGTFLANILGSIIYTVLFVVLRRYSNLTEEMDFSNHLKWTLGAVLTGFCSSLTTISSFVNDIC----KLPSVKRYVYIICTIIVANGM 295          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A5J9V813_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V813_9POAL)

HSP 1 Score: 96.7 bits (239), Expect = 5.000e-18
Identity = 82/276 (29.71%), Postives = 129/276 (46.74%), Query Frame = 2
Query:  575 SNAIGSFALG---ILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAA---------------CGRLHWRGD-RSALNIRVGRAMGVLGFMYTLLAVLLIVD----DRGGRRPDWVACMFAPFGALARFFLSRM--------LNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNPL--SGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTAT 1303
            SN +GSF +G   I+  +D+ + +  HL  GI+ G+ G+ TT+SGWN +M        +S     + AV G+V+ +     C   G +  + + +               C   HWR D R+   + +   M +L F++ L  VL +V     D G     W+ C  AP G   R++L+R+         + RW     PIGT AANV   L        A+ +    +  ++ +L G Q GFLG L+T+S+FA EV+  R     A ++VY  +T
Sbjct:   36 SNMLGSFLMGWFGIIFKADIRQIS-DHLIVGISTGYMGSLTTFSGWNQKMV------GLSSKGHWVYAVAGIVLGMFIVNECITVGAETGERLRSSIQKYIRENSSIGSKCDWDHWRVDTRTKHFVLLSVMMVLLSFLWVLSVVLAVVKVHSLDDGAVL--WLGCSVAPPGVWLRWYLARLNGQGVGKQRSLRW----LPIGTLAANV---LXXXXXXXXAVTSKAVHTKQSATILSGIQLGFLGCLSTVSTFAAEVYTMRRSGQIAKAFVYAAST 295          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A2P2KBV9_RHIMU (Uncharacterized protein MANES_18G074800 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KBV9_RHIMU)

HSP 1 Score: 96.3 bits (238), Expect = 5.140e-18
Identity = 90/281 (32.03%), Postives = 129/281 (45.91%), Query Frame = 2
Query:  575 SNAIGSFALGILSASDLNEDTLP---HLYTGITVGFCGAYTTYSGWNLRMARVALR-HDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACG-------RLH-------WRGDRSALNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPD--WVACMFAPFGALARFFLSRMLNARWRGGA-----FPIGTFAANVSG-CLAMALAYYGALKNPLSGWN-SIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVV 1336
            SN +GSF +G L       D L    HL  G+T G+ G+ TT+SGWN +M  + L  H V   SG             FFI  F+A   ++  +           RLH        + D S  ++ V     VLG +++L  +LL  D R G      W+AC+ A  G   R+FL+R LN    G       FP GTF ANVS  C+  ALA    LK  ++    +I+  G Q GF G L+T+S+F  E         +  +YVY   +  V+ G+ +++
Sbjct:   30 SNMVGSFLMGWLGVV-FKGDILRVSNHLAIGLTTGYLGSLTTFSGWNQKMVDLVLDGHWVLSLSG-------------FFIGLFLAAYSIIFGVRTAKHFELLVERLHRSRTGSTQKVDNSKQHLAVVVLTLVLGILWSLCGILLKKDLRSGASGAKLWLACIVAAPGVWIRWFLAR-LNGHGLGKVGHLKWFPFGTFIANVSAACIMAALA---RLKKAVNTETCTIISTGLQFGFAGCLSTVSTFIAEYHAMEDSSRSWRAYVYALTSIAVSFGLGILI 292          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A0A9D4V6_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9D4V6_ARUDO)

HSP 1 Score: 97.8 bits (242), Expect = 1.270e-17
Identity = 83/269 (30.86%), Postives = 129/269 (47.96%), Query Frame = 2
Query:  575 SNAIGSFALG---ILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDL-----------VKTMAACGRLH----WRGD-RSALNIRVGRAMGVLGFMYTLLAVLLIVDDRG--GRRPDWVACMFAPFGALARFFLSRMLNARWRGGA-----FPIGTFAANVSGCLAMALAYYGALKNPLSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTAT 1303
            SN +GSF +G   I+  +D+   +  HL  GIT G+ G+ TT+SGWN +M        +S     + AV G+V+ +         G +            ++  ++ GR H    W+ D R+  ++ +   M +L F++ L  VL +V  R        W+ C  AP G   R++L+R LN +  G        PIGT AANV     MA A     K   +  ++ +L G + GFLG L+T+S+FA EV+  R     A ++VY  +T
Sbjct:  189 SNMLGSFLMGWFGIIFKADIRHIS-DHLIVGITTGYMGSLTTFSGWNQKMV------GLSSKGHWVYAVAGIVLGMFIVNESITVGAETGERLRSLILEYIREKSSIGRKHDWEHWKVDTRTKQSVLLSVMMVLLSFLWILSIVLAVVKVRSLADGAVLWLGCSVAPPGVWLRWYLAR-LNGQGIGKQRSLKWLPIGTLAANVLAAGIMA-ALAVTSKAVHTNRSTTILSGIEFGFLGCLSTVSTFAAEVYTMRRSGQIARAFVYAAST 448          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A2I2F9I5_9EURO (Putative chromosome condensation protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A2I2F9I5_9EURO)

HSP 1 Score: 97.4 bits (241), Expect = 1.320e-17
Identity = 102/365 (27.95%), Postives = 160/365 (43.84%), Query Frame = 2
Query:  482 YISWCAALGCLARLYTD--DIGNGNPALQGSFLSNAIGSFALGIL---------------SASDLNED----------------TLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVA-----------VVGVVVSLSFFIACFVAGTDLVKTM-AACGRLHWRGDRSALNIRVGRAMGVLGFMYTLLAVLLIV--DDRGGRRPD-W-----VACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAY-------YGALKNPLSGWNSIV-----LKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVVGAAFGVR*ELTWPIG 1381
            Y+ + +  G LARL     D+  G P   G    N  GS  +G+                + S  N D                T+P LY G+T GFCG ++++S + +R   +AL +D++DPS   +A           V  +++++S  +   + G  L   +        +R  R  ++        +LG+   L AV + +   DR    PD W      A +FAP G L R++LS  LN R     FP+GTF AN+ GC+ MA+ Y        GA     +  +S+V     L+G   GF GS+TT+S++  E+ G   +  A   Y+Y   +  VALG  +V+  +      + W IG
Sbjct:   87 YLVFFSIFGTLARLGLQAIDMYPGTPVTLGVLWPNLGGSLLMGLFLEDRNLFREEWGNVPTPSGTNRDPDQAREEAKRHKSVKKTIP-LYIGLTTGFCGCFSSFSSF-IRDVFLALSNDLADPSAPTIASRNGGYSFMALVAAILITVSLSMGGLMFGAHLALALDPIMPTFPFRVTRHIID----PLFVILGWGCWLGAVFMAIWPPDRHSSDPDVWRGRAVFAIVFAPLGCLMRYYLSLALNTRTPS--FPLGTFTANIFGCIIMAMCYDLQRVSGIGAPDATGAASHSVVVSCQVLQGIMEGFCGSVTTVSTWVAELHGLSRRRKA---YIYGIVSIAVALGFFVVITGS------MRWTIG 434          
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A8J5QLL5_9ASCO (Uncharacterized protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QLL5_9ASCO)

HSP 1 Score: 95.9 bits (237), Expect = 3.180e-17
Identity = 76/226 (33.63%), Postives = 119/226 (52.65%), Query Frame = 2
Query:  626 NEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACF---VAGTDLVKTMAACGRLHWRGDRSALNIRVGR-------AMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALA-YYGALKNPLSGW--NSI----VLKGFQAGFLGSLTTMSSFAGEVFG 1252
            N+ ++P +YTGIT GFCG  +++S   L     A   ++        A  G++  L+  +A F   + G  + K M++        DR  + + + +       ++G+   +  ++ VLL V   GG R    A +FAPFGA+ RF+LS+ LN++     FP+GTF ANVSG L +A+    G  K P +G    S+    VL G + GF G+LTT+S+F  E+FG
Sbjct:  155 NKGSIP-VYTGITTGFCGTVSSFSSVMLEAFNKAADTEIGVNFNYPNAAYGIMEFLAVMLAQFGLSIMGFHMGKHMSSVA------DRYIVPLSLKQYKILERISIGIAVSLVIIICVLLGVKSEGGWRSWTFAMLFAPFGAVLRFYLSKYLNSKMTN--FPLGTFTANVSGSLLLAIFNLVGRGKLPDNGRIVTSVIGCHVLMGLEDGFCGALTTVSTFVVELFG 371          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2L8_ECTSI1.190e-10156.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7N9_9STRA1.480e-2631.60CrcB-like protein-domain-containing protein n=1 Ta... [more]
A0A835ZHA0_9STRA5.170e-2431.33CrcB-like protein-domain-containing protein n=1 Ta... [more]
A0A1Y2FQS7_PROLT2.880e-2230.82CrcB-like protein-domain-containing protein n=1 Ta... [more]
E4YWW4_OIKDI7.290e-1931.29Uncharacterized protein n=2 Tax=Oikopleura dioica ... [more]
A0A5J9V813_9POAL5.000e-1829.71Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
A0A2P2KBV9_RHIMU5.140e-1832.03Uncharacterized protein MANES_18G074800 n=1 Tax=Rh... [more]
A0A0A9D4V6_ARUDO1.270e-1730.86Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
A0A2I2F9I5_9EURO1.320e-1727.95Putative chromosome condensation protein n=3 Tax=A... [more]
A0A8J5QLL5_9ASCO3.180e-1733.63Uncharacterized protein n=1 Tax=[Candida] subhashi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12502contigH-paniculata_contig12502:1568..4946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score131.0
Seed ortholog evalue9.8e-28
Seed eggNOG ortholog7719.XP_002131803.1
KEGG koko:K06199
KEGG TC1.A.43.1,1.A.43.2,1.A.43.3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.CrcB-like protein, Camphor Resistance (CrcB)
EggNOG OGs2QT5F@2759,39IFP@33154,3C3JJ@33208,COG0239@1
Ec32 ortholog descriptionPutative fluoride ion transporter CrcB
Ec32 orthologEc-11_002710.1
COG Functional cat.D
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons2
Model size2633
Cds size924
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12502.1571.1prot_H-paniculata_contig12502.1571.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12502 2841..4510 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928970.7207115-UTR-H-paniculata_contig12502:1567..28401622928970.7207115-UTR-H-paniculata_contig12502:1567..2840Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12502 1568..2840 -
1691480686.5864394-UTR-H-paniculata_contig12502:1567..28401691480686.5864394-UTR-H-paniculata_contig12502:1567..2840Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12502 1568..2840 -
1622928970.7640011-UTR-H-paniculata_contig12502:4510..49461622928970.7640011-UTR-H-paniculata_contig12502:4510..4946Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12502 4511..4946 -
1691480686.6298778-UTR-H-paniculata_contig12502:4510..49461691480686.6298778-UTR-H-paniculata_contig12502:4510..4946Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12502 4511..4946 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928970.7327857-CDS-H-paniculata_contig12502:2840..31561622928970.7327857-CDS-H-paniculata_contig12502:2840..3156Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12502 2841..3156 -
1691480686.6082325-CDS-H-paniculata_contig12502:2840..31561691480686.6082325-CDS-H-paniculata_contig12502:2840..3156Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12502 2841..3156 -
1622928970.7474372-CDS-H-paniculata_contig12502:3902..45101622928970.7474372-CDS-H-paniculata_contig12502:3902..4510Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12502 3903..4510 -
1691480686.6198926-CDS-H-paniculata_contig12502:3902..45101691480686.6198926-CDS-H-paniculata_contig12502:3902..4510Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12502 3903..4510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12502.1571.1

>prot_H-paniculata_contig12502.1571.1 ID=prot_H-paniculata_contig12502.1571.1|Name=mRNA_H-paniculata_contig12502.1571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
MHLQLPDQALVVKCVYISWCAALGCLARLYTDDIGNGNPALQGSFLSNAI
GSFALGILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRH
DVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACGRLHWRGDRSA
LNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFF
LSRMLNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNPLSGWNSIVLK
GFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVV
GAAFGVR*
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mRNA from alignment at H-paniculata_contig12502:1568..4946-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12502.1571.1 ID=mRNA_H-paniculata_contig12502.1571.1|Name=mRNA_H-paniculata_contig12502.1571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3379bp|location=Sequence derived from alignment at H-paniculata_contig12502:1568..4946- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTTTAGTTGTTCTTCTCGTGGAAGCTACTTCAGAACGGCAGCAGCTTC GCAGCAACAAAATTGGGGCACGACCAGCATTTCGGGGTGCGTTTCAATCG TCGGCACGTACTATTATCAGTAGAAGGTCGAGCAGCAGTAGCAGCAGTAG CAGCAGCAGTAGCTCCAACAACGGCAATAGTAGAGTCGGTGGTAGCCGAC GTGCAGCAGCTTGGCGCTTGTACTCTCTGCGTGGTGGTGAAAGTGACAGC AGGAGCAATAATAGCAGCAGCAGTCGCTCACTAAACAACCGTTTTGCTAA CACAGCTAGTGCACTATTCAAAACCCCTCGAGAATTTAGGACAAGTCTTC CCCCAGCAGCAACGGCCGGCAACGACAACGGCAACAAGAACAGTGGTACC AATTCTTCTCCTAAGCAAAGTATCAGAACAGGACGGATGCACCTCCAGCT CCCGGATCAAGCCCTCGTGGTCAAGTGCGTCTACATCTCCTGGTGCGCTG CGCTGGGCTGCCTTGCGCGGCTCTACACCGACGACATCGGGAACGGCAAT CCCGCCCTCCAGGGCTCGTTCCTCAGCAACGCGATTGGCAGCTTCGCCCT GGGTATTTTATCGGCCTCGGACCTGAACGAAGACACCCTGCCGCATCTCT ATACCGGCATCACGGTGGGCTTTTGCGGGGCGTACACTACCTACTCAGGA TGGAACCTTAGAATGGCGCGGGTGGCCCTGCGGCATGACGTCTCCGACCC CAGCGGGGCGATTGTCGCTGTCGTCGGGGTCGTGGTGTCTCTCTCATTTT TTATTGCCTGCTTCGTCGCGGGCACTGACCTCGTCAAGACCATGGCTGCC TGCGGAAGGCTGCACTGGCGGGGGGATCGATCGGCGTTGAACATCCGTGT GGGCCGCGCGATGGGGGTGCTTGGCTTCATGTATACCCTGCTGGCGGTGT TGCTGATTGTGGATGACAGGGGAGGGAGGCGGCCGGACTGGGTGGCGTGC ATGTTTGCACCTTTTGGAGCTCTCGCCAGGTTTTTCCTCTCGAGGTGCAT AAACGTGAAACGGAGTTCGGGGGTCAAGTGTTACAGTAAAAATCAAATCT TGTGTTGTTTTTTAACAAGAGTTTTGATATGTGCAGTACGGCGTTGTTGG TTGCTGATTGCGTGCTGTACACCATGCACCGCCGCTGATTTTTGTATGAC GCTGCACCGCTAGTTGCAGCAACAGAAGCTCTGCGATTGATTGGATATAT TTTTGATTGCCCACCGACAGTCCCCCACTACAGTGTCTGAACATTGTAAC AGAATTGGCATGTTGCTGTACCGAATCTTCACCGTATAGTTTGTCCTTCC TCAGTCCATATTTTGACAACTGTTACTACTGTACCCGCACCGCTGCCAAT GGCAGGAAACGATCCATGATAGGGCGACTGTCCATACCCTTTATTTCAGT TTTTGTTCTTCAGCAACAATTTTCTTGCACTGCAATACAACACGCTAAAA TTCAAATCTCAGTTGAACGGTATCACGATGAAATAAGTCCTCGTGCTGTG GCACCTCGTCGTATCCCAAGATCTCTCCTGCTGCTGTACTCGCTCCCCGC ATCTGCTATGAAGCTCGTAGTGGGTGTAATTAATATGACCTATTGACCTA TGATTCATACCACCTCTGCCGCTCATGTAGTTTCTTGTCCGTTGACACCG ACACCACGATTCCCGGCCGCCGCCGCCCACACTCATGGCGCACTCTCACG AACCCATTCACCCCACCCCCATCCAAAACACGGGAAACAGGATGCTAAAC GCTCGGTGGCGAGGAGGCGCTTTCCCAATCGGCACCTTCGCTGCTAACGT TTCCGGCTGCCTAGCGATGGCACTCGCGTACTATGGGGCCCTGAAAAACC CCTTGTCCGGCTGGAATAGCATCGTGCTGAAAGGATTCCAAGCTGGTTTC CTGGGGTCTCTGACGACGATGTCCTCTTTCGCCGGAGAGGTGTTTGGCCA CAGGGGAAAACACAGCGCCGCGGCGAGCTATGTATACTTGACGGCGACCG CGGTCGTGGCCCTTGGCATCGCTCTGGTCGTGGGCGCGGCTTTCGGTGTT CGATGAGAGCTGACGTGGCCCATTGGACGCTTCTTCTTTTTCCGTTATTT TTTTTTTCTTCTTGTTGTTTTCCTTCTCATTTGCGTCCCGGAAGATAACT CACGTAAATCGGTGTTTGTTTTGTGTGTGCGTGCTCGTGTTTTTGGTGGT TTTATTTGTTTTAGACATTAGACTTTAAAATTTTTAAGCCCTTGTCTATT GTTATACCACCTGGGTGTGTGTCCATAGAAAACGCGAGAAGCGCAACGGA TGAGAAAGAGCAGGATTCCCTCCTGCCTCTGCCTGACACGAAAATTGTGT CAACTCAGGCGTGCTATTGCTACTGGATCCCAAGATATACTTGGTTACGC ACGTCCCTGCCCCCGTTTCGCGTACATTTTTTTGCTGTCAAGATTCGACA TTATTTTTACTATGTACGTCTTGACTGTCTCCTTAAAGCATTCATGCTGG ACGGCCAGCGCTCGGTCGGCACGTCGACGATGTTTGGCAGCAATTTTGTC GGTAGAACCCCGGTTAACTGTAGTTAAAGCATACGTGCCCATTTGTTGGG CAGAGTCGGTTATATTTAACGTACTATTTGTCGCGTTTTCTGTTATGTGT GTTTTCTGCTAGTTCCCTAGGTATGTTTTTGTTTTTTTCATTTTTCTGCT TTTGTTGTCGCCTCTACCCTGAATTTCTTTACTTTCAAACACGTCCTTGA TGAGAGTCAACTATTGTTGCGCTCTCTGAAGAAGGCACTCTCCTGCTTGT ACTTGTGGTTTTGATACTTTTTTTTGTTGAGTAAAGTCTGTTTTCTAGTG TCAGCTGTGACTTGTAGGTTCGTCGTGCGTGTTCCGAATCGTGTAATGTG CCTCTTTTATTCAGGAGCAGGGCGGATTTCTTCGATTAAAATCGGGCGGG AGGCACTTTCGTTTCTTTTGGAATTGGTGTCATGTATGTAATGTCCAGTT CTTGGGAAATATTCCCAAAGTGGGGTAAATGGATGACACAGAGATACGTG ATGCTCTCTCTGTGTATTGTGGATTAGCGTTTGTCGAGCTGTTACGAGTC AATTCTTGAGGCTGTTGTTCGTTAAAGGTTGTTCGTTAAAGAACTTTCTG GTGGGGCCTCTGTGTGTCGGTTTTCACTGGATGATAATTAAGACGAGAAA GCAGCGCGAGGCAGCAAGGCAGCAAGTTGCGTTTAGATTATTGGTGCTTT TCTTCTGCCGTGATCTCTTCTGTCTAGTCTCGATGGCGATTGGTAACGCC AAGGGTGTACCAGAAGTGATATATTTGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig12502:1568..4946-

>mRNA_H-paniculata_contig12502.1571.1 ID=mRNA_H-paniculata_contig12502.1571.1|Name=mRNA_H-paniculata_contig12502.1571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1848bp|location=Sequence derived from alignment at H-paniculata_contig12502:1568..4946- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCACCTCCAGCTCCCGGATCAAGCCCTCGTGGTCAAGTGCGTCTACAT
CTCCTGGTGCGCTGCGCTGGGCTGCCTTGCGCGGCTCTACACCGACGACA
TCGGGAACGGCAATCCCGCCCTCCAGGGCTCGTTCCTCAGCAACGCGATT
GGCAGCTTCGCCCTGGGTATTTTATCGGCCTCGGACCTGAACGAAGACAC
CCTGCCGCATCTCTATACCGGCATCACGGTGGGCTTTTGCGGGGCGTACA
CTACCTACTCAGGATGGAACCTTAGAATGGCGCGGGTGGCCCTGCGGCAT
GACGTCTCCGACCCCAGCGGGGCGATTGTCGCTGTCGTCGGGGTCGTGGT
GTCTCTCTCATTTTTTATTGCCTGCTTCGTCGCGGGCACTGACCTCGTCA
AGACCATGGCTGCCTGCGGAAGGCTGCACTGGCGGGGGGATCGATCGGCG
TTGAACATCCGTGTGGGCCGCGCGATGGGGGTGCTTGGCTTCATGTATAC
CCTGCTGGCGGTGTTGCTGATTGTGGATGACAGGGGAGGGAGGCGGCCGG
ACTGGGTGGCGTGCATGTTTGCACCTTTTGGAGCTCTCGCCAGGTTTTTC
CTCTCGAGATGCACCTCCAGCTCCCGGATCAAGCCCTCGTGGTCAAGTGC
GTCTACATCTCCTGGTGCGCTGCGCTGGGCTGCCTTGCGCGGCTCTACAC
CGACGACATCGGGAACGGCAATCCCGCCCTCCAGGGCTCGTTCCTCAGCA
ACGCGATTGGCAGCTTCGCCCTGGGTATTTTATCGGCCTCGGACCTGAAC
GAAGACACCCTGCCGCATCTCTATACCGGCATCACGGTGGGCTTTTGCGG
GGCGTACACTACCTACTCAGGATGGAACCTTAGAATGGCGCGGGTGGCCC
TGCGGCATGACGTCTCCGACCCCAGCGGGGCGATTGTCGCTGTCGTCGGG
GTCGTGGTGTCTCTCTCATTTTTTATTGCCTGCTTCGTCGCGGGCACTGA
CCTCGTCAAGACCATGGCTGCCTGCGGAAGGCTGCACTGGCGGGGGGATC
GATCGGCGTTGAACATCCGTGTGGGCCGCGCGATGGGGGTGCTTGGCTTC
ATGTATACCCTGCTGGCGGTGTTGCTGATTGTGGATGACAGGGGAGGGAG
GCGGCCGGACTGGGTGGCGTGCATGTTTGCACCTTTTGGAGCTCTCGCCA
GGTTTTTCCTCTCGAGGATGCTAAACGCTCGGTGGCGAGGAGGCGCTTTC
CCAATCGGCACCTTCGCTGCTAACGTTTCCGGCTGCCTAGCGATGGCACT
CGCGTACTATGGGGCCCTGAAAAACCCCTTGTCCGGCTGGAATAGCATCG
TGCTGAAAGGATTCCAAGCTGGTTTCCTGGGGTCTCTGACGACGATGTCC
TCTTTCGCCGGAGAGGTGTTTGGCCACAGGGGAAAACACAGCGCCGCGGC
GAGCTATGTATACTTGACGGCGACCGCGGTCGTGGCCCTTGGCATCGCTC
TGGTCGTGGGCGCGGCTTTCGGTGTTCGATGAGATGCTAAACGCTCGGTG
GCGAGGAGGCGCTTTCCCAATCGGCACCTTCGCTGCTAACGTTTCCGGCT
GCCTAGCGATGGCACTCGCGTACTATGGGGCCCTGAAAAACCCCTTGTCC
GGCTGGAATAGCATCGTGCTGAAAGGATTCCAAGCTGGTTTCCTGGGGTC
TCTGACGACGATGTCCTCTTTCGCCGGAGAGGTGTTTGGCCACAGGGGAA
AACACAGCGCCGCGGCGAGCTATGTATACTTGACGGCGACCGCGGTCGTG
GCCCTTGGCATCGCTCTGGTCGTGGGCGCGGCTTTCGGTGTTCGATGA
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