mRNA_H-paniculata_contig12502.1571.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: D7G2L8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L8_ECTSI) HSP 1 Score: 330 bits (845), Expect = 1.190e-101 Identity = 177/312 (56.73%), Postives = 221/312 (70.83%), Query Frame = 2 Query: 449 LPDQALVVKCVYISWCAALGCLARLYTDDIGNG-NPALQGSFLSNAIGSFALGILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACGR-LHWR----------GDRSALNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNP--LSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVVGA 1342 LP + +V KC YIS+CA G LARLYTDDIG N ALQGSFL+N+IGSFALG L++S E +Y G+TVGFCG+YTTYSGWNLR+AR AL PSGAIV +V + SL+FF ACF AG D++K +A+ GR L+ R GD A+ +G+LG +Y LLAVLL VD+ RR DW+AC+FAPFGAL+RFFLSR LN+R RGGAFP+GTF ANV G L MAL++YG + SGW+++ +K FQ GFLGSLTTMS+F EV GHR +H+ +ASY+YL ATA+ A + L+VGA Sbjct: 63 LPGRPMVAKCAYISFCACFGTLARLYTDDIGPASNVALQGSFLANSIGSFALGALASSPDRETIPDAMYAGLTVGFCGSYTTYSGWNLRIARAALGQVSGAPSGAIVTIVSMATSLAFFAACFSAGCDVMKQIASHGRRLNIRRMLGGGALAGGDSDAVR----NTLGMLGAVYVLLAVLLGVDNNWSRRIDWLACIFAPFGALSRFFLSRQLNSRLRGGAFPLGTFTANVLGSLVMALSFYGTKNSSSLTSGWSNVAIKAFQTGFLGSLTTMSTFMSEVVGHRDRHTPSASYIYLAATAIAAQALVLIVGA 370
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A836C7N9_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N9_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.480e-26 Identity = 97/307 (31.60%), Postives = 145/307 (47.23%), Query Frame = 2 Query: 452 PDQALVVKCVYIS---WCAALGCLARLYTD--------DIGNGNPALQGSFLSNAIGSFALGILSASDLNEDT---LPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACGRLHWRGDRSALNIRVGRAMGVLGFMYTLLAVLLIV-----DDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNPLSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVA 1315 P + VV +Y+S W A GC AR++T+ D+ + + L SF N GS LG L A+ L TG++VG CGAYTT+S W L+ + + P I A+ + S++ FI G D+ + + ++A I G V G + A+ L + D+ + W++ +FA GA R+ L+R N ++RGG FP+GTF AN+ G LA AL + K S W+ + F GF SLTTMS+ E+ R HS +YL +T ++A Sbjct: 90 PQEPSVVN-LYVSVALWAIA-GCYARIFTERLFGSTAADVIDADTLLVPSFFDNVAGSMILGFLVAASTTMSKGGGALVLLTGMSVGLCGAYTTFSAWTLQTNALLIAPTSDVPQPQIAALCYIFASIATFIVAHRVGADVGALLTGAVQ------KAAPGISEGIIAIVNGVLLVATAIGLSIALGVNDNSWLEKRYWLSGLFAIPGASLRYALARQFN-KFRGGRFPLGTFLANIGGTLACALVTHEFTK--ASDWDDTAARAFVTGFCASLTTMSTLVNELAILRRDHSVQDGVIYLASTVILA 385
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A835ZHA0_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHA0_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.170e-24 Identity = 99/316 (31.33%), Postives = 145/316 (45.89%), Query Frame = 2 Query: 566 SFLSNAIGSFALGILSASDLNEDTLPH------LYTGITVGFCGAYTTYSGWNLRMARVALRHD----VSDPSGAIVAVVGVVVSLSFFIACFVAGTDL--------------VKTMAACGR------------LH---------WRGDRS---ALNIRVGRAMGV-----LGFMYTLLAVLLIVDDRGG-RRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNPLSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVVGAAFG 1351 +F N +GS LG+L A+ T+P L TG+T GFCGAYTT+S W L+ + + + DP + ++ + L+ FI G DL VK ++A +H W G + A RV RA+ + L LA+ L +DD RR W++ +FA GAL RF L+R LNA +RGG FP+GTFAAN+ G + AL + A + + W + F GF SLTTMS+ E+ R A VY+ ++ ++A +A V+ +G Sbjct: 5 AFFDNCMGSMILGLLVAA---TSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNA-FRGGLFPLGTFAANMLGTICSALIAH-AYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWG 315
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A1Y2FQS7_PROLT (CrcB-like protein-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FQS7_PROLT) HSP 1 Score: 109 bits (273), Expect = 2.880e-22 Identity = 94/305 (30.82%), Postives = 144/305 (47.21%), Query Frame = 2 Query: 416 QSIRTGRMHLQLPDQALVV--KCVYISWCAALGCLARLYTDDI----GNGNPALQGSFLSNAIGSFALGILSASDLNEDTLPH--LYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSG-------AIVAVVGVVVSLSFFIACFVAGTDLVKTMAAC---GRLHWRGDRSALNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAYY--GALKNPLSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHS 1270 Q+ + R Q P +AL V +C +I + LG L+RL ++ GN PAL + +G +G L + H L+TG+TVGFCG+ TT+SGW L + S+ S AI + + +L+F I F G +A+ RL + + + + + +L ++AV VD RR +A P GAL R+ LS++ N R FP+GTF AN+ GC AL + + +G + + L+G Q GF G+LTT+SSF E+ + KH+ Sbjct: 6 QATSSERKIPQYPSRALQVIHECAWIGLLSLLGTLSRLALVELNTYPGNLIPALV---WAQFVGCAVMGFLKHDQVFFQPNRHKALFTGLTVGFCGSLTTFSGWLLACFTALSDYGTSEASAGRSTGYNAIGLIAQLTTTLAFSIVGFKLGQHAADGLASIFPKARLTFPQATTRTAVCITALLALLA-QAVVIAVAASVDHTSWRRRYTLALAMTPTGALLRYLLSQLFNHRVLS--FPLGTFNANILGCFLEALFFLLQTVVDRDGAGIHFLALQGLQDGFCGALTTVSSFVSELHTLKRKHA 304
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: E4YWW4_OIKDI (Uncharacterized protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4YWW4_OIKDI) HSP 1 Score: 102 bits (255), Expect = 7.290e-19 Identity = 92/294 (31.29%), Postives = 132/294 (44.90%), Query Frame = 2 Query: 479 VYISWCAALGCLARLYTDDIGNGNPALQG-----SFLSNAIGSFALGILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACGRLHWRGDRSALNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGC-----LAMALAYYGALKNPLSGWNSI--VLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGI 1324 V IS A G LAR+ D + QG SF SN G F +G+ +L + + TG+T GFCG +TT+SGWN + A + +VV +V + F+ G DL + + + S L I + G+L +++LL L R W A + PFGAL R +L + LN WR +P+GTF AN+ G L + L Y L + N + L GF SLTT+SSF ++ K + YVY+ T +VA G+ Sbjct: 23 VSISIFAFFGVLARIGLDRLAKPIETFQGHPYYSSFFSNLAGCFFIGLFG--NLRKSLIS---TGLTTGFCGCFTTFSGWNHQQALTFFDSSLGTYEKG-TSVVTWIVGMFSFVGALSCGKDLGQKL---NDMKAPDSSSKLLITIRIMFGLLVVLFSLLCGLF-----EETRLIWFATLLGPFGALLRHYLGKNLNG-WRD--YPLGTFLANILGSIIYTVLFVVLRRYSNLTEEMDFSNHLKWTLGAVLTGFCSSLTTISSFVNDIC----KLPSVKRYVYIICTIIVANGM 295
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A5J9V813_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V813_9POAL) HSP 1 Score: 96.7 bits (239), Expect = 5.000e-18 Identity = 82/276 (29.71%), Postives = 129/276 (46.74%), Query Frame = 2 Query: 575 SNAIGSFALG---ILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAA---------------CGRLHWRGD-RSALNIRVGRAMGVLGFMYTLLAVLLIVD----DRGGRRPDWVACMFAPFGALARFFLSRM--------LNARWRGGAFPIGTFAANVSGCLAMALAYYGALKNPL--SGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTAT 1303 SN +GSF +G I+ +D+ + + HL GI+ G+ G+ TT+SGWN +M +S + AV G+V+ + C G + + + + C HWR D R+ + + M +L F++ L VL +V D G W+ C AP G R++L+R+ + RW PIGT AANV L A+ + + ++ +L G Q GFLG L+T+S+FA EV+ R A ++VY +T Sbjct: 36 SNMLGSFLMGWFGIIFKADIRQIS-DHLIVGISTGYMGSLTTFSGWNQKMV------GLSSKGHWVYAVAGIVLGMFIVNECITVGAETGERLRSSIQKYIRENSSIGSKCDWDHWRVDTRTKHFVLLSVMMVLLSFLWVLSVVLAVVKVHSLDDGAVL--WLGCSVAPPGVWLRWYLARLNGQGVGKQRSLRW----LPIGTLAANV---LXXXXXXXXAVTSKAVHTKQSATILSGIQLGFLGCLSTVSTFAAEVYTMRRSGQIAKAFVYAAST 295
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A2P2KBV9_RHIMU (Uncharacterized protein MANES_18G074800 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KBV9_RHIMU) HSP 1 Score: 96.3 bits (238), Expect = 5.140e-18 Identity = 90/281 (32.03%), Postives = 129/281 (45.91%), Query Frame = 2 Query: 575 SNAIGSFALGILSASDLNEDTLP---HLYTGITVGFCGAYTTYSGWNLRMARVALR-HDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDLVKTMAACG-------RLH-------WRGDRSALNIRVGRAMGVLGFMYTLLAVLLIVDDRGGRRPD--WVACMFAPFGALARFFLSRMLNARWRGGA-----FPIGTFAANVSG-CLAMALAYYGALKNPLSGWN-SIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVV 1336 SN +GSF +G L D L HL G+T G+ G+ TT+SGWN +M + L H V SG FFI F+A ++ + RLH + D S ++ V VLG +++L +LL D R G W+AC+ A G R+FL+R LN G FP GTF ANVS C+ ALA LK ++ +I+ G Q GF G L+T+S+F E + +YVY + V+ G+ +++ Sbjct: 30 SNMVGSFLMGWLGVV-FKGDILRVSNHLAIGLTTGYLGSLTTFSGWNQKMVDLVLDGHWVLSLSG-------------FFIGLFLAAYSIIFGVRTAKHFELLVERLHRSRTGSTQKVDNSKQHLAVVVLTLVLGILWSLCGILLKKDLRSGASGAKLWLACIVAAPGVWIRWFLAR-LNGHGLGKVGHLKWFPFGTFIANVSAACIMAALA---RLKKAVNTETCTIISTGLQFGFAGCLSTVSTFIAEYHAMEDSSRSWRAYVYALTSIAVSFGLGILI 292
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A0A9D4V6_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9D4V6_ARUDO) HSP 1 Score: 97.8 bits (242), Expect = 1.270e-17 Identity = 83/269 (30.86%), Postives = 129/269 (47.96%), Query Frame = 2 Query: 575 SNAIGSFALG---ILSASDLNEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACFVAGTDL-----------VKTMAACGRLH----WRGD-RSALNIRVGRAMGVLGFMYTLLAVLLIVDDRG--GRRPDWVACMFAPFGALARFFLSRMLNARWRGGA-----FPIGTFAANVSGCLAMALAYYGALKNPLSGWNSIVLKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTAT 1303 SN +GSF +G I+ +D+ + HL GIT G+ G+ TT+SGWN +M +S + AV G+V+ + G + ++ ++ GR H W+ D R+ ++ + M +L F++ L VL +V R W+ C AP G R++L+R LN + G PIGT AANV MA A K + ++ +L G + GFLG L+T+S+FA EV+ R A ++VY +T Sbjct: 189 SNMLGSFLMGWFGIIFKADIRHIS-DHLIVGITTGYMGSLTTFSGWNQKMV------GLSSKGHWVYAVAGIVLGMFIVNESITVGAETGERLRSLILEYIREKSSIGRKHDWEHWKVDTRTKQSVLLSVMMVLLSFLWILSIVLAVVKVRSLADGAVLWLGCSVAPPGVWLRWYLAR-LNGQGIGKQRSLKWLPIGTLAANVLAAGIMA-ALAVTSKAVHTNRSTTILSGIEFGFLGCLSTVSTFAAEVYTMRRSGQIARAFVYAAST 448
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A2I2F9I5_9EURO (Putative chromosome condensation protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A2I2F9I5_9EURO) HSP 1 Score: 97.4 bits (241), Expect = 1.320e-17 Identity = 102/365 (27.95%), Postives = 160/365 (43.84%), Query Frame = 2 Query: 482 YISWCAALGCLARLYTD--DIGNGNPALQGSFLSNAIGSFALGIL---------------SASDLNED----------------TLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVA-----------VVGVVVSLSFFIACFVAGTDLVKTM-AACGRLHWRGDRSALNIRVGRAMGVLGFMYTLLAVLLIV--DDRGGRRPD-W-----VACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALAY-------YGALKNPLSGWNSIV-----LKGFQAGFLGSLTTMSSFAGEVFGHRGKHSAAASYVYLTATAVVALGIALVVGAAFGVR*ELTWPIG 1381 Y+ + + G LARL D+ G P G N GS +G+ + S N D T+P LY G+T GFCG ++++S + +R +AL +D++DPS +A V +++++S + + G L + +R R ++ +LG+ L AV + + DR PD W A +FAP G L R++LS LN R FP+GTF AN+ GC+ MA+ Y GA + +S+V L+G GF GS+TT+S++ E+ G + A Y+Y + VALG +V+ + + W IG Sbjct: 87 YLVFFSIFGTLARLGLQAIDMYPGTPVTLGVLWPNLGGSLLMGLFLEDRNLFREEWGNVPTPSGTNRDPDQAREEAKRHKSVKKTIP-LYIGLTTGFCGCFSSFSSF-IRDVFLALSNDLADPSAPTIASRNGGYSFMALVAAILITVSLSMGGLMFGAHLALALDPIMPTFPFRVTRHIID----PLFVILGWGCWLGAVFMAIWPPDRHSSDPDVWRGRAVFAIVFAPLGCLMRYYLSLALNTRTPS--FPLGTFTANIFGCIIMAMCYDLQRVSGIGAPDATGAASHSVVVSCQVLQGIMEGFCGSVTTVSTWVAELHGLSRRRKA---YIYGIVSIAVALGFFVVITGS------MRWTIG 434
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Match: A0A8J5QLL5_9ASCO (Uncharacterized protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QLL5_9ASCO) HSP 1 Score: 95.9 bits (237), Expect = 3.180e-17 Identity = 76/226 (33.63%), Postives = 119/226 (52.65%), Query Frame = 2 Query: 626 NEDTLPHLYTGITVGFCGAYTTYSGWNLRMARVALRHDVSDPSGAIVAVVGVVVSLSFFIACF---VAGTDLVKTMAACGRLHWRGDRSALNIRVGR-------AMGVLGFMYTLLAVLLIVDDRGGRRPDWVACMFAPFGALARFFLSRMLNARWRGGAFPIGTFAANVSGCLAMALA-YYGALKNPLSGW--NSI----VLKGFQAGFLGSLTTMSSFAGEVFG 1252 N+ ++P +YTGIT GFCG +++S L A ++ A G++ L+ +A F + G + K M++ DR + + + + ++G+ + ++ VLL V GG R A +FAPFGA+ RF+LS+ LN++ FP+GTF ANVSG L +A+ G K P +G S+ VL G + GF G+LTT+S+F E+FG Sbjct: 155 NKGSIP-VYTGITTGFCGTVSSFSSVMLEAFNKAADTEIGVNFNYPNAAYGIMEFLAVMLAQFGLSIMGFHMGKHMSSVA------DRYIVPLSLKQYKILERISIGIAVSLVIIICVLLGVKSEGGWRSWTFAMLFAPFGAVLRFYLSKYLNSKMTN--FPLGTFTANVSGSLLLAIFNLVGRGKLPDNGRIVTSVIGCHVLMGLEDGFCGALTTVSTFVVELFG 371 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12502.1571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12502.1571.1 >prot_H-paniculata_contig12502.1571.1 ID=prot_H-paniculata_contig12502.1571.1|Name=mRNA_H-paniculata_contig12502.1571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp MHLQLPDQALVVKCVYISWCAALGCLARLYTDDIGNGNPALQGSFLSNAIback to top mRNA from alignment at H-paniculata_contig12502:1568..4946- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12502.1571.1 ID=mRNA_H-paniculata_contig12502.1571.1|Name=mRNA_H-paniculata_contig12502.1571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3379bp|location=Sequence derived from alignment at H-paniculata_contig12502:1568..4946- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12502:1568..4946- >mRNA_H-paniculata_contig12502.1571.1 ID=mRNA_H-paniculata_contig12502.1571.1|Name=mRNA_H-paniculata_contig12502.1571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1848bp|location=Sequence derived from alignment at H-paniculata_contig12502:1568..4946- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |