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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 2427 |
| Cds size | 933 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12494.1563.1 >prot_H-paniculata_contig12494.1563.1 ID=prot_H-paniculata_contig12494.1563.1|Name=mRNA_H-paniculata_contig12494.1563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=311bp
MGGCAGRALNAFNSFTDTIETVFCGLVGDCWYVDATTSDEEVDVVDTAAA
RCERFTELAKMIPVRDLPTDEVVGQDSTEQITVDVARLPGEVSLVTKILR
EFVELYPNVGYNQGGDWCLLAILSAVGDSYDTALRVFAKWAVTTAWVTVR
TIGGENEALFKAVWYTVNVLDEQTPSVVQWLLDDKIMNLRECTGNMFFKT
LTSFIFLRPMATLCSTEGFDERILHVIIEKTLEYGEDGPAVSLWVITCLL
NMAFQNAKSTAGCSGGSEAMAHRMTEAAESAKTFQELENSAPLPLAEFIR
RFRTDGKLAD* back to topmRNA from alignment at H-paniculata_contig12494:1349..7463- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12494.1563.1 ID=mRNA_H-paniculata_contig12494.1563.1|Name=mRNA_H-paniculata_contig12494.1563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6115bp|location=Sequence derived from alignment at H-paniculata_contig12494:1349..7463- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAACTCCGGCATTTGGGGTAGGGGCAACGATATCTCTCCGAGAAAAGAA
CAACAACATGACGACCTGCCTACAGACACACCACCGATTACGCCGCCCGG
ATCAGCTCCGAGCTCTCTTCAGGAATGTTTTTCGCTGGACCTGGAGGCGG
GGAACCTCAGTCCTCCGCCTGAAGACTTCTCGGGACTGAGAAAACCGCTG
CTCTACCAAGAAGAGAAGCGAGGTATGACGATAATTTCGGAAGTAGACTG
TGTGTTTCAGTAATTTCTGTAGATAAACGGTGCGTTTACAATACGATTGC
CTTGGAATTGCAGACGCCGCTTAGCTGGCACTGAATAGTAGCTCCCCGTC
AACCCGTGCTTCCCCTGAGGAGGAGACGGTGGAAACGCAATATTCAACCT
CGAATACCCCACTCCCTTTCCTCTAATTCTAACTAATGAATGAATGCAGG
TGACGTCGACGAATCAACGAACGACGTCTCAATCGTCACGGAGAGCAACA
TCGACGACGTGTTGTCTACCGTGGGACTGCCCGTGCATAACTCTGCCGGC
TTTGTCGAAGACGATGTAAACGACGACGACAACGATGGGGATCCTCTGTG
CTGGTCATGGATGGGGGGATGTGCTGGGCGCGCATTGAACGCCTTCAACT
CCTTCACTGATACGATTGAAACCGTCTTTTGCGGACTGGTAGGGGACTGT
TGGTACGTAGACGCAACCACTTCCGACGAGGAAGTGGATGTCGTGGACAC
GGCCGCGGCTAGGTGTGAGAGGTTCACCGAGCTGGCGAAGATGATTCCAG
TGAGGGATCTACCGACCGACGAGGTGGTAGGCCAGGACAGCACAGAGCAA
ATTACTGTGGACGTGGCCCGACTTCCAGGCGAAGTATCTCTCGTGACGAA
GATTCTGCGAGAGTTCGTAGAGTTGTATCCGAACGTCGGGTACAATCAGG
TGAGTTTACGTTTCCGCATGCACTGCTTTCTATTTTTCTCATGTTAAGAG
TTAGTGGTCTTATATGTATATTTCGATCTAGTAATGTAGGCCTGATCGTG
AAGTATATTCGTGTTTGGAGCAAAGATATCGTTTGTTTCGGGGTCGTGTT
TCAGGCGGGTATGGCAGGGGCTGGTATGGTGATGTGTGAAGATCAACGTT
CGCTATTGTTGAGGGGCCAGCTTTGGCAAAAATCTCCGTTGTTCCTTCTT
GTTTCTCGTCCCGCTTTTCCGAACACTCGGATCAAAGATTTAGCTTGAAA
GACATGCGCACGATAATCGCTTTGGGCCAGGATTAAGCCTGGCGGCAAAC
CCTGCTATATTGCAATATACATACAACGAAGAATCGTTTTTCGCATAGAA
TGGGGGATGGAAAACCATGCGAAATACGTTGACATGGGAGCCTTCCGAGA
ATCTAGCACCAATAGCAAGTTAGGCAGACTGAAGCACGTGGAAGGTCGCA
TCAGCGAGCCTTGCTCTACATCAACTAAACTTGTGTAATTTTCTCTATTT
GTCTAGATGTTGTTTTGTGGCGCTGCTTTGTCAGGTGCGATTCAGGAACC
TCGGGATACAACACCCAGCCATACCTACCATAACCACTATTTCGCACGAA
CTATGAGAATATTTGCTCGATACCCCAAACGGGAGCATTTTATGATCGGG
TTACATGATACGCATGAATACAAGAGAGCCACCCACTCTAACACAAGAGA
AGCAGCAAACACTTCGAGCAGAAGCATCAAGCCACCTGATTGTACTCCAT
GTTTAGGTACAACTCCACGAATCTTCCCAGAATCTTTCCTCCCACAATCT
TGTCGCCTGGAAGCCGGTCGGTGCTACCCTGGTCAAGCACCTCGTCATCT
GGCAGATCCCTGACGAGAATGTTTCCGCGAAGCTGGCCAACCGCCAGCAT
CCATTGGCAGTCTCCTTGACCCTGGGCATCTCTTTATCGGGAAATTTTCC
ATCGGGGAAGCCACAAGCTGCCACCAGGCCGCACGGGCCGTTCATGAGGC
CTGCTTTTGCCGCCGGGAGGTGGATTGTGACTTTCCCGACCGGGAAATTT
CCAATGAAAAGACTACTAAGGTCATCGATGCTACCGCTGGGTGCTGGCGG
TTCGACGAGCTCGCGAGCGATATTCGTGTAAGGGATCTGCCGACGGACCA
GCGCTACGCGAAGGTAGCACCACACCACAGCAGGAAAGACTCTGCAGGAG
CTCGTCGAGATTTACCCCGGACACGGGATACGATCATGTGATTTTATGTT
GATGCCTGTGTTTGCTGTGTCTCTCATGCTAAAGGGGGTGGCCCTGTGCG
CATGCATGCATATCGTGTAGTCCTGGTCATGACTTAAGCTCGTGCTGAAC
ATGGAGAAAATACTACTGTGTGCTATGGTAGTGTGTACGGCAAGTGTGCT
AAGGTTTGGTATTCTGAATGGTTCGCCCGGAGGTTTTTTGACGTTCATAG
ACAAGGCTCTATATTTTTCATTTGCACACTTCGTTCTATTTTCTCCCAAA
CACCAACAACACAAACACACACGCACATCACTTGAACTTGAACGAAAATG
CTTCTTTTTCGCGGGAGTTAGATTTAAGCCCGACTGCATCGCCTTCGCAC
CCGCCGTGATCCCACTTTTGTGCCGATCACCGCTATCTTCTTTTCCCCCA
ACGTCATTGGTATGGTAGGGCGGGGATTGGTGTCTATTGGCCATCTTGTC
CGCTGTCGGGGATTCTTACGACACTGCTCTCCGAGTGTTCGCCAAGTGGG
CAGTGACCACCGCGTGGGTAACGGTGCGTACCATTGGTGGGGAAAATGAA
GCTCTCTTCAAGGCAAGTGACAAACGGAATCCAAGTGAGCCTTCCCGCCG
CCCCTTGCCCCTTGCCCCTCAGCCCCTTCAAAATCCTATAGTCTATTCAA
GTACAACCCCCATGCCACACTGCATCACGGCAAAGTTATTGAACTCCCAA
AACAGGACTGGAATAAGTTGGTATTCATTGTATTTAGACCGGTTGCCAAT
TCATTCGTGCATCTTTTTTTGCTGCGGGTATTGTCATGCATAGATGGCTT
GTGAAGCCATCCTCGACCCACCACATAGTTGTAGTGCTGGTGGTAGGTTT
AGGACGGTTAAAGTGAGTATATGGTTCATCGTGAGATCACTCATCATACG
GTTCCGTCACTTCTCGCGTTTATCGCGGAACTTTTACCCAAGTGTAGAAG
TAATCAATTCAGGGTACACCAAGATCTTCACCCACGATTCAAGATGCCAG
ACGTTCTCCAACCCTGTGTTGATGCTCTAATTCTGCATAACAAAGAGTGC
CAGGCTGAGTGCTAAAACACGGAAACTTCATGTAACATCAGACGCAGATA
CCGTATGTTGTTTGTGTCTGGTTTCACCCGCCTTTGGCTCACGAAAATAG
TGTTTTGTTCGTCTCATGCTTCTTCCCCCATTGCTGGTTCCAAAACTGCA
GGCAGTGTGGTACACCGTGAACGTGCTCGACGAGCAAACCCCGTCGGTGG
TACAATGGCTACTAGACGATAAGATCATGAATCTCCGAGAGTGTACTGGC
AACATGTTCTTCAAGACTCTGACCAGCTTCATCTTCTTGAGGTGTGTGTA
TGTACCGAGACGTAGTATTGTCTATTTGTGATTTACCATCGATCGTCGCA
AAATCACTCGAGGCCATTTTGTCGGCCACAAGGATTCATGTTGATATATT
CGGTAATTCCTCTTGGGCGGGAATCTGTCTTCATTTGCAATTGACATGGT
TGAAGCCATCATGTTCGTTGTAACAAGAAGGTATCTTGAACGTTCGGAAT
GTGAGATTCCTCTCGACCACGCAACCTGGCTAAGAAAAACATGCTTGAAC
CGTCGAAAACACATGCAAGAAAATAACACACAAAACCCCAAACCGCTCAC
GAAGCACAACAGCAACGCCACAAGGTCACGTCTCCAGTTGTGTGCGCACA
CCGCATCTAATCCCATCAACAACTCCACCATAAATCCAGGTCCTACATGT
GTGTTTCATTACGTGATGCCGTATGCGGTACTCGCAACCGGTGTCGCCGA
CCCTATCGACCTATTTGTATATTTCCATATCCCGCCCTTTCCCCCCCCTC
CCGTACCATAACTATTGTGTACCTGCTTCTTCTGTCAAATAGACCGATGG
CCACGCTCTGCTCTACCGAGGGATTCGACGAGCGCATTCTCCACGTGATC
ATCGAGAAAACGCTCGAGTACGGAGAGGATGGACCAGCTGTTTCGCTTTG
GGTTATCACTTGTCTTCTCAACATGGCGTTTCAGAATGCCAAAAGCACAG
CCGGCTGCAGTGGTGGTAGCGAGGTGCGCAGCGCTAGTAGCACTTGGTGT
TGAAAGACCTGTTGCCTCTTCTGTACGACTGTAGGACTATGGCACAACCT
GAACGGTATTACTTTGAGACCCCCTCCTTAAGGGCGCATATTCTCAAGGG
TGCATATTCTACAGTATGTAGCAGCATCATCTGGTGTCTTTAGATAATCT
GAGGCGATTCCTGTGTAGGGGCAAACGGTGTCGTCGACCACATACTTCCA
GTATTCAACTGCGCGTTATTATTTGTTCACTCATGACACCCGCAGTCAGG
ATTTTGGCCATGATGAAACGAAACGACATGAGACACACATGTGCTTGTCT
ATATGTTGTGCATAAGCAGGCCATTCCTTCATCCTCTTTTGACGTTGATT
CGGTCCCTAGGCTCGGGTGTTAAAGTAATAGGGTCAGGGAGGGTTGAGGT
TCACGCTCGGAAATAGGAAAACTAGCACCCCACCCCCCAACTCCGCTCCA
ATATGCTCGTTGTTGGTCCAAGGAACGCGTGTATAATATTTCTACCGTGT
TTCTTTTCTTGAAATGCACATGCAGGCGATGGCTCACAGGATGACGGAGG
CTGCGGAAAGTGCGAAGACCTTCCAGGAACTCGAGAACTCCGCGCCCCTC
CCCCTGGCAGAGTTTATCAGACGGTTCAGGACTGACGGCAAGCTGGCTGA
CTAACCTGGTACCCCCAATTAGCAGTGCAAAACAGACTACACCATGTAGT
AGTTGTACATACGACTGGTGCACAAAGAATTTGTCATCATTTCCCTGCCC
GGCGGATATGACAAATGAGCGGCGAGGAATGACTGGGGGACGAGAAGATG
CCGGAGTCATCAAGAAGAATGTTTTGTATGTATGTTGAATGTTGAGTTCT
TACGTGTTTTTTCGAGGAACAAAATAGTATCGCTTTGAAAATGTGTCATG
TGTAAATCAAACGTTTGGAGATCTCAACAAATAACGGTCGATCAGGGCCT
TGGAGAACCGAGGAGGAGGGGGGATTCAGGTGATCAAGCAATATTCAACG
AAATGAATGTGCTGGTATTGGTTATGTATGTATGTATGCATTATGGTAAG
CAATGCGTATTTTGGTACGAAAGTCAGTCGCTGCAGTACACGGGGGGTCG
ATCACTTACCTCACCATCGAATATTAAAGTTCCTATTCCAGGCAGCAGGA
CTTCCGCCTTTGCTGTTCGGGAACGCTGCGGTTGTTTTGTGGTCTAGCCT
TGAGATACAAGCGCTGTACTGTTAGTATTAGTACTGTTTGTAGCAGTCGT
TTACATGTATCGAGACAGTCGTGCGTTGAAAATACAAGATAGCATGCGTT
GGTTGATTGATTGATTTGGTTTTTGTTAAGTACCTCACTGTCCATATATG
TTTGTTCTCGGTATTTATGTATAGCTAACGACGATGAATATAATTGGTGA
TCAAGTTTTTGTTGATTTCTTGTAAAAAAATTTGGCTCGTTGTTTTTCAG
ATTATTGGTTGGATGGATGTTTTTCAGGTGTTTTTAGTTCAGAATTTTGC
ACACAAGTGGGTACCCCCGTTTTGAGGCGGTCATTAATCAGGTGATATAG
ATCATTGAAGGCAATTATTAATCCCAGGTGGTATAAGATCTGAGGCACGA
CAAAACTTGCAGGCTGAGGTGCAATTTTGATTCTATTGGACGTTCGTTGA
TTGAATGGCGTCGTGCTTCCATTTTAAACATTTTCGACAGACGAGTATTC
ATTTGTGTGTGCTGTTTCGTCCCCTGAGGGGAGCGATCTCTTCTCGGTAA
TAAATTCCAAAGTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig12494:1349..7463- >mRNA_H-paniculata_contig12494.1563.1 ID=mRNA_H-paniculata_contig12494.1563.1|Name=mRNA_H-paniculata_contig12494.1563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at H-paniculata_contig12494:1349..7463- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGGATGTGCTGGGCGCGCATTGAACGCCTTCAACTCCTTCACTGA
TACGATTGAAACCGTCTTTTGCGGACTGGTAGGGGACTGTTGGTACGTAG
ACGCAACCACTTCCGACGAGGAAGTGGATGTCGTGGACACGGCCGCGGCT
AGGTGTGAGAGGTTCACCGAGCTGGCGAAGATGATTCCAGTGAGGGATCT
ACCGACCGACGAGGTGGTAGGCCAGGACAGCACAGAGCAAATTACTGTGG
ACGTGGCCCGACTTCCAGGCGAAGTATCTCTCGTGACGAAGATTCTGCGA
GAGTTCGTAGAGTTGTATCCGAACGTCGGGTACAATCAGATGGGGGGATG
TGCTGGGCGCGCATTGAACGCCTTCAACTCCTTCACTGATACGATTGAAA
CCGTCTTTTGCGGACTGGTAGGGGACTGTTGGTACGTAGACGCAACCACT
TCCGACGAGGAAGTGGATGTCGTGGACACGGCCGCGGCTAGGTGTGAGAG
GTTCACCGAGCTGGCGAAGATGATTCCAGTGAGGGATCTACCGACCGACG
AGGTGGTAGGCCAGGACAGCACAGAGCAAATTACTGTGGACGTGGCCCGA
CTTCCAGGCGAAGTATCTCTCGTGACGAAGATTCTGCGAGAGTTCGTAGA
GTTGTATCCGAACGTCGGGTACAATCAGGGCGGGGATTGGTGTCTATTGG
CCATCTTGTCCGCTGTCGGGGATTCTTACGACACTGCTCTCCGAGTGTTC
GCCAAGTGGGCAGTGACCACCGCGTGGGTAACGGTGCGTACCATTGGTGG
GGAAAATGAAGCTCTCTTCAAGGGCGGGGATTGGTGTCTATTGGCCATCT
TGTCCGCTGTCGGGGATTCTTACGACACTGCTCTCCGAGTGTTCGCCAAG
TGGGCAGTGACCACCGCGTGGGTAACGGTGCGTACCATTGGTGGGGAAAA
TGAAGCTCTCTTCAAGGCAGTGTGGTACACCGTGAACGTGCTCGACGAGC
AAACCCCGTCGGTGGTACAATGGCTACTAGACGATAAGATCATGAATCTC
CGAGAGTGTACTGGCAACATGTTCTTCAAGACTCTGACCAGCTTCATCTT
CTTGAGGCAGTGTGGTACACCGTGAACGTGCTCGACGAGCAAACCCCGTC
GGTGGTACAATGGCTACTAGACGATAAGATCATGAATCTCCGAGAGTGTA
CTGGCAACATGTTCTTCAAGACTCTGACCAGCTTCATCTTCTTGAGACCG
ATGGCCACGCTCTGCTCTACCGAGGGATTCGACGAGCGCATTCTCCACGT
GATCATCGAGAAAACGCTCGAGTACGGAGAGGATGGACCAGCTGTTTCGC
TTTGGGTTATCACTTGTCTTCTCAACATGGCGTTTCAGAATGCCAAAAGC
ACAGCCGGCTGCAGTGGTGGTAGCGAGACCGATGGCCACGCTCTGCTCTA
CCGAGGGATTCGACGAGCGCATTCTCCACGTGATCATCGAGAAAACGCTC
GAGTACGGAGAGGATGGACCAGCTGTTTCGCTTTGGGTTATCACTTGTCT
TCTCAACATGGCGTTTCAGAATGCCAAAAGCACAGCCGGCTGCAGTGGTG
GTAGCGAGGCGATGGCTCACAGGATGACGGAGGCTGCGGAAAGTGCGAAG
ACCTTCCAGGAACTCGAGAACTCCGCGCCCCTCCCCCTGGCAGAGTTTAT
CAGACGGTTCAGGACTGACGGCAAGCTGGCTGACTAAGCGATGGCTCACA
GGATGACGGAGGCTGCGGAAAGTGCGAAGACCTTCCAGGAACTCGAGAAC
TCCGCGCCCCTCCCCCTGGCAGAGTTTATCAGACGGTTCAGGACTGACGG
CAAGCTGGCTGACTAA back to top
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