mRNA_H-paniculata_contig12490.1561.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12490.1561.1
Unique NamemRNA_H-paniculata_contig12490.1561.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: D7G0W6_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W6_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 7.990e-75
Identity = 115/123 (93.50%), Postives = 119/123 (96.75%), Query Frame = 1 
Query:    1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKVAKETDEEGETPAAK 369
            MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVY+DIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKM KRMDQQAKKKELEELRAKLKVA+E D  G+TPA+K
Sbjct:    1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEELRAKLKVAREEDAAGDTPASK 123
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: A0A6S9GFW4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GFW4_HETAK)

HSP 1 Score: 182 bits (463), Expect = 2.040e-57
Identity = 87/113 (76.99%), Postives = 102/113 (90.27%), Query Frame = 1 
Query:    4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKVAKETD 342
            RLPPEVNR +YVRNLPFKI+A+EMYDIFGKYGAIRQIR+GD+ DT+GTAFVVYEDIYDAK AVDHLSGFNVCGRYLIVLYYQP +M K+MDQ+ +++ELEEL+AK    ++ D
Sbjct:   12 RLPPEVNRVLYVRNLPFKITAEEMYDIFGKYGAIRQIRIGDKPDTKGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQPTRMAKKMDQERERRELEELKAKYLAERQND 124
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: R1DMS8_EMIHU (RRM domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DMS8_EMIHU)

HSP 1 Score: 182 bits (461), Expect = 4.840e-57
Identity = 91/117 (77.78%), Postives = 105/117 (89.74%), Query Frame = 1 
Query:    1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKVAKETDEEG 351
            MRLPPEVNRA+YVRNLPFKI+A+EMYDIFGK+GAIRQIRLG+  DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLYYQ  KMQKR+D + ++KEL E+RAKL +  +T +EG
Sbjct:   10 MRLPPEVNRALYVRNLPFKITAEEMYDIFGKFGAIRQIRLGNASDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQQTKMQKRLDTEREQKELAEMRAKLGI--DTGDEG 124
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: A0A835YN30_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN30_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.180e-56
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 1 
Query:    4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKVAKE 336
            RLPPEVNR +YVRNLPFKI+ADEMYDIFGKYGAIRQIRLGD+ DTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQ  K  KR+D+  K++E+EE++AK  V  E
Sbjct:   11 RLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGE 121
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: A0A7S2C985_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C985_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.260e-56
Identity = 87/111 (78.38%), Postives = 101/111 (90.99%), Query Frame = 1 
Query:    4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKVAKE 336
            RLPPEVNR +Y+RNLPFKI+++EMYDIFGKYGAIRQIR+GD+ DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYLIVLYYQ A+M+KR+D   K++ELEEL+AK  V+ E
Sbjct:   12 RLPPEVNRVLYIRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQAARMEKRIDNDKKRRELEELKAKFNVSGE 122
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: A0A7S2DAY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAY0_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.300e-56
Identity = 87/109 (79.82%), Postives = 99/109 (90.83%), Query Frame = 1 
Query:    4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKVA 330
            RLPPEVNR +YVRNLPFKI+++EMYDIFGKYGAIRQIR+GD+ DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLYYQ ++MQKRMD   K+KELEEL+ K  V+
Sbjct:   14 RLPPEVNRVLYVRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQASRMQKRMDNDKKRKELEELKQKYNVS 122
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: A0A7S2S8J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8J7_9STRA)

HSP 1 Score: 179 bits (455), Expect = 3.970e-56
Identity = 86/111 (77.48%), Postives = 100/111 (90.09%), Query Frame = 1 
Query:    4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKVAKE 336
            RLPPEVNR VYVRNLPFKISA+E+YDIFGKYGA+RQ+RLGD+ DTRGTAFVVYEDIYDAK AVDHL+GFNVCGRYL+VLYYQ +KMQ+R+D Q K++ELEEL+ K  +  E
Sbjct:   16 RLPPEVNRVVYVRNLPFKISAEEIYDIFGKYGALRQVRLGDKPDTRGTAFVVYEDIYDAKNAVDHLNGFNVCGRYLVVLYYQASKMQERIDNQRKRQELEELKKKYNIQTE 126
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: A0A7S3SDL9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SDL9_9SPIT)

HSP 1 Score: 177 bits (449), Expect = 3.260e-55
Identity = 85/107 (79.44%), Postives = 98/107 (91.59%), Query Frame = 1 
Query:    1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKL 321
            +RLPPEVNRA+YVRNLPFKISA+EMYDIFGK+GA+RQ+RLG   DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLYYQ  KMQKR+D + +++EL E+RAKL
Sbjct:   16 LRLPPEVNRALYVRNLPFKISAEEMYDIFGKFGALRQVRLGSAPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQQTKMQKRLDTEREQRELAEMRAKL 122
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: A0A0M0JX52_9EUKA (Pre-mRNA branch site p14-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX52_9EUKA)

HSP 1 Score: 177 bits (448), Expect = 4.480e-55
Identity = 86/109 (78.90%), Postives = 98/109 (89.91%), Query Frame = 1 
Query:    1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKV 327
            +RLPPEVNRA+YVRNLPFKI+A+EMYDIFGK+GAIRQIRLG+  DTRGTAFVVYEDI+DAK AVDHLSGFNVCGRYL+VLYYQ  KMQKR D + + KEL E+RAKL +
Sbjct:    9 LRLPPEVNRALYVRNLPFKITAEEMYDIFGKFGAIRQIRLGNAADTRGTAFVVYEDIFDAKTAVDHLSGFNVCGRYLVVLYYQQTKMQKRQDTEREMKELAEMRAKLGI 117
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BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Match: A0A7S2JD52_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JD52_9EUKA)

HSP 1 Score: 176 bits (447), Expect = 6.360e-55
Identity = 85/108 (78.70%), Postives = 98/108 (90.74%), Query Frame = 1 
Query:    4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKELEELRAKLKV 327
            RLPPEVNRA+YVRNLPFKI+A+EMYDIFGK+GAIRQIRLG+ QDTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLY+Q  KMQKR+D + + KEL E+RA+  +
Sbjct:   10 RLPPEVNRALYVRNLPFKITAEEMYDIFGKFGAIRQIRLGNAQDTRGTAFVVYEDIYDAKTAVDHLSGFNVCGRYLVVLYFQQTKMQKRLDTEREMKELAEMRARFGI 117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12490.1561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W6_ECTSI7.990e-7593.50RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6S9GFW4_HETAK2.040e-5776.99Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1DMS8_EMIHU4.840e-5777.78RRM domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A835YN30_9STRA1.180e-5680.18RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2C985_9STRA1.260e-5678.38Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DAY0_9STRA1.300e-5679.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2S8J7_9STRA3.970e-5677.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3SDL9_9SPIT3.260e-5579.44Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A0M0JX52_9EUKA4.480e-5578.90Pre-mRNA branch site p14-like protein n=1 Tax=Chry... [more]
A0A7S2JD52_9EUKA6.360e-5578.70Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12490contigH-paniculata_contig12490:565..6439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score229.9
Seed ortholog evalue6.3e-58
Seed eggNOG ortholog2880.D7G0W6
Preferred nameSF3B6
KEGG rclassRC00632,RC00680
KEGG koko:K01464,ko:K12833
KEGG ReactionR02269,R03055,R08227
KEGG Pathwayko00240,ko00410,ko00770,ko00983,ko01100,ko03040,map00240,map00410,map00770,map00983,map01100,map03040
KEGG ModuleM00046,M00352
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0001701,GO:0001824,GO:0001825,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005689,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0030532,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048646,GO:0048856,GO:0070013,GO:0071011,GO:0071013,GO:0071704,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.RNA splicing
EggNOG OGsKOG0114@1,KOG0114@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-23_002040.1
EC3.5.2.2
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko04147
Exons5
Model size372
Cds size372
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12490.1561.1prot_H-paniculata_contig12490.1561.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12490 565..6439 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928968.8551586-CDS-H-paniculata_contig12490:564..6251622928968.8551586-CDS-H-paniculata_contig12490:564..625Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 565..625 -
1691480685.8210983-CDS-H-paniculata_contig12490:564..6251691480685.8210983-CDS-H-paniculata_contig12490:564..625Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 565..625 -
1622928968.869201-CDS-H-paniculata_contig12490:1576..16381622928968.869201-CDS-H-paniculata_contig12490:1576..1638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 1577..1638 -
1691480685.83159-CDS-H-paniculata_contig12490:1576..16381691480685.83159-CDS-H-paniculata_contig12490:1576..1638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 1577..1638 -
1622928968.8839793-CDS-H-paniculata_contig12490:2480..26181622928968.8839793-CDS-H-paniculata_contig12490:2480..2618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 2481..2618 -
1691480685.8387089-CDS-H-paniculata_contig12490:2480..26181691480685.8387089-CDS-H-paniculata_contig12490:2480..2618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 2481..2618 -
1622928968.8959928-CDS-H-paniculata_contig12490:3193..32631622928968.8959928-CDS-H-paniculata_contig12490:3193..3263Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 3194..3263 -
1691480685.8460925-CDS-H-paniculata_contig12490:3193..32631691480685.8460925-CDS-H-paniculata_contig12490:3193..3263Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 3194..3263 -
1622928968.909258-CDS-H-paniculata_contig12490:6398..64391622928968.909258-CDS-H-paniculata_contig12490:6398..6439Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 6399..6439 -
1691480685.8532903-CDS-H-paniculata_contig12490:6398..64391691480685.8532903-CDS-H-paniculata_contig12490:6398..6439Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12490 6399..6439 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12490.1561.1

>prot_H-paniculata_contig12490.1561.1 ID=prot_H-paniculata_contig12490.1561.1|Name=mRNA_H-paniculata_contig12490.1561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTA
FVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMQKRMDQQAKKKEL
EELRAKLKVAKETDEEGETPAAK*
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mRNA from alignment at H-paniculata_contig12490:565..6439-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12490.1561.1 ID=mRNA_H-paniculata_contig12490.1561.1|Name=mRNA_H-paniculata_contig12490.1561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5875bp|location=Sequence derived from alignment at H-paniculata_contig12490:565..6439- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGCTGCCGCCAGAGGTCAACAGAGCCGTGTACGTCAGGTGAGTGCT
AATAGTACATATGCGTGAACAAGCCTACGTCGTGTTGTCATTACCCGTGA
CGTAGTGTAGCACCGTTAGTAATATTACTGCAGTTGATCAAGTGTTGTCC
TATCGATAGAACAACTTGAATATACGATGATTAGAATACAATGTGACTTT
GGCCGCGCTGTGGGTTCAAGTTTGGTCTTGCCAACACTCAAAACACGGAA
CACTTAAGTGTACCCCCCCGGACAAATACGAATAATGGGCGAATTCGCCA
CGAAACATGTATATATATTCGCCCCAAGTTTCAGAATAAGCGGAAACATA
GAATCAAGTACCCACCCCTGTCCATTCGATTTACGAGTATTATCAGCAGT
CTTGGATGGTCCGGAGTACATAGGATACAGGAGCTCATACTTTCAGTTTT
TTGTGCAAACCGTGTGCAAGTATTCGTATATGTCCGAGGGGTGAACAATT
GGAACATGCATTTGGTTTTCCTAACTTTATCCACTTGTTGTAGGTGGTGG
TTGGCGGAAGCGGTACGCCCGCCCGTGCAGTCGTGTGCTATCTCTATATT
TTGAAGGGGTGCATGCGTGTACAGGTATCGTCATTATTATTATGGTATGG
TGCGTATATTTTTTTCTACATGCAGTACTAGGTCGGCATTTGATCGGGAC
CCATCGTCGTGAGTCCGAAGGCTAGAATTGCACTGATGCCTCTGTGTATA
GATGCCTTGTGTAATCGCGCGGTGGAGGCAGCAGTCCACTCTCACTCGCT
TGTCAATGTTGGAATTGACGGCGGTGTATCCTCTGACGAGTATTCTTGTT
CCTTCGGCAGAGCAGTCAGTCAGTTCTGCCTCGTAATGGATCTTTGATTT
TTAATAACGTTTTCCCGAAGTAATACATTTCTCCCAAAGTTATTCTCTAG
AGTGTTTGGAAAACACATATTTGTGTGCAGATTTCGATTTGATCATGCAT
GGGTAATAGTGAGCTCCAGGTGCCGATCCCTGGTGCACCTGCACTATCTT
GGCAAAACGCGAAACGGTTGTATTTTTCAAGATTCGGATTTTTTTTTTAT
TGAGTTGTACGAAATTTGACGGGTTGTGAAAAGGTATTCATCTTGTAGCG
AGGCGTTGGTGTAGGTGGGCCGGGATTCAGGACCTGCAGCTCACTACGAG
TCCTACAGGACCAAATCAAGATTTACGAACAGATGGTTGTATTCACGAAC
ATCCTGTTTTTTCCCAAAGCTCGAGGGAAAAAAATGGTGAGACCAGATAA
TTGAACCTACAACCTGGTCTTATGGTGTATATACTGTTCTGCGGTCAACC
CTAGTTCCGACGGGAACCGCATAGTCGAACCGTTTAGTCCTTGTCTATGA
TCTAACTGACCTTTTCCAGTGTGAAAAAAAAATGTGGGGCAGACGAAATA
TAAACGATTGGTGGCACTTGCGTGTAAACCTCCGTAGATCCACCCAGATA
TGGTGTAAAATGACAGGTGGGACTCGTATGCAAACAAATCTACGTTAGAT
ATCTTGTTCGCTGCGCACCAATATATCCACAGGGATGGCCTGTTGAGGAA
GCACTTGAGGTAGGGTCGCCTTGGTCTGATTACCGTAGAGTGCTGCCTGA
ATGACCCAGGGGCGACTTTTTTTGGGGGGGTTTTAATGCCCAATTTTATC
GAAAACTACGGTGCTAGCGATCTGAAATTGTGGTTTCAAAAAAATCTATC
TCATCGAGATTGATCTGTTAATCGACGTGCTCTGATTTCTAACGCACGTG
GACTTGTTTGGTGGAGAAAATCGGTACTATAAAAAGGTTGCCTTTGGGGT
GTTCTGACAGCGCTCTACGGTACACACGGTTCCTGAAAAATAGCGGTTTT
GCTGTTGGTTGTTAGAAGCTGGTGGGATGCTGAGCCGCTCGATCGCATGG
CACGTGAGTAGCAATGGATGCACAGGCGTGAAAGTTTTCATCATCCGGAT
GAATACGCGTAATATGCTTGAACTTGTTTTAACGAAAAAATTGAAAGTAT
TCGCTTGAAGGCTGGTTCAACATGAGTAAGGACACGCTTCTTCGATGTGC
CCTGAAGCATCTGCCACGACTGCGGTGAATAGTATTGAAACGAAAAAAGC
AGAGGGATCCCCCCCCCCTGCACATGCCTTAACTTGCACGGTTACTTGTG
TGGAAAACGTTCGTCTCTACAGAGCAACACAAGTAAATAGTTGGGTTCGT
TGACGGGGTGAAATTATTTTATCTTCTTATCCCCAGGAGACCACGCGTAA
CCTCTTCGGGTACTTATACTGAGATAGTTACGTACGTCCAGCTTTTGTAT
GCCAGTTTTATTATGATGTCTCCGTCAGATTTTACCCTCCCAAAGTATCC
ATGATTCCGATGGCAGGTGCCTTGGGGGAGGCTACTCGTAGCTTGGGCGC
GTATGTGTTGCTATCAAACACATAGACAATGTAGAACTAGGGTCAAGAAT
GAGACTCGAACCCATTAAAATCCCTCAGATGCGTCCAAGATTTGCGCAGT
ACATGTGCTACTCTGCCCGTTTGAACTTTGGTTCATTGGAGATGAAAGCT
TTAAAGGGGTGGTTGGCAATGAAATGTCGGACAGTGTGCGGTAGTTGCTG
TTTATTCAGCATTTTAAGAGCATTCACAGAAAAAATAGTAGAGTAGAGGG
ATTGTGGAAGTATTTTTTATACGCCGTCCGCTACATGGTTATGAATCATA
CCGCGAACGCATGTCGTCATTGTAGTTGCCGGTGATTTTGACAGTAACGA
TGATGGCGTTCTAGTGGACCCAGCAGCGTGCCCATTTTGTGGTGCTGATA
TATATATATATATTATTATGTATGTAGTATCCCCCGACACTCGCGTGCCG
CCGTAACAACGTTAGTTCGTGGTAATGCAGATGTCACCCCCCTCTTGGTT
TGTTCACTTTGTGGATAAAAACTAAATAGGTAATCCAGCAGCTGAAGGTG
CTGAGCATACCTCCATTTTGTTTAGCGTGGATTGTCATGTTTTTCATCGT
ACAGTAATTTATGCATTTCTGCGTGTACTTGTGACTTGCTCATGTGACCC
CCCCCCTCCCCACCCTCTCCGCCCTGATCCTGTGCAATTCCGTTATCCTC
ACTGTCGGCACGTTACTGGCCAATAGAAACTTGCCGTTCAAGATCTCTGC
GGATGAAATGTACGACATCTTTGGGAAGTACGGGGCTATCCGACAGGTGC
GTGGTTTAAAGTATCACTCTTAATTTAGCGCGATAGTTGTGCTCGTGGTG
GTGGTGGAAATCGCTCGGGAATGGATGTCCGACTGTGTACTCGAGTATCG
TCTGAATTGTTTACTCTTCAAAAATGTACTGGAGAGAATCGGCGCTACGA
ATCCCTCGGAACCAAAACCGTTCAAGAAGTTCTTATGCATGGAGCTACAT
GCTCACATACATACGAAACAACTACTGCAATTCATAACAATGAAGGTTAC
AAAGGGTTCACCCCATACCAGCCCTTATACACGAGCGATACAGCACCAAT
GATGGGTTTGCTATCCGTGACGGTTTGGAGGTTGGGCGTGATGATGTCAT
CTGAACAAACAAACACACACACAAACACACACACACACACACACACATGG
GTGCGAGAGGATCCCATGTGGTACCCTGGTAATGCACATTGAAGATAACG
CCGGTACAAATAAAAACATTTTGGACGCGACTATCTATCTACCCTGAAGT
GTCGCACGTGTCTTGTCCTCTCCGCCCGTCGCCCTTCGCGGCGGTGAATA
CGATAATATATATTTTGTCAGATTCGCCTGGGGGACCGGCAAGATACGAG
GGGAACGGCGTTTGTGGTTTACGAAGACATCTACGACGCTAAAGCAGCGG
TGGATCACCTGAGCGGTTTCAATGTGTGCGGTCGATATCTTATCGTCCTC
TATTACCAGGTAAGCGAAACGCCAGCCGTGTGCGTTTGGGGGGTGTACGC
GGCCGTGCGCGGCCGCGCGTGGGTGGGTGGGTGGGGGGGGGATCACCCTG
TCACGATCCGTTGAACTAAAACTTTGAACTTCACATTATAACGTCATTGT
ACCCATGTTGAGGTCATGCAGCTGACTTCAACCTGCAGCCGCGTACACTG
ATCAGCAAAGTTTAATCAAAAAGGGAGAGGGGGGGATCGTATGTCAGCAG
ACGGTTTTAAAGTACAGAATTTCGACACTACTTGAGCTATTGTTCTCCTT
CACGACGAAACATTGCTTTTTTTCACCGTTTCCATTGTCGGTTTGTTACG
GGTTTTTTTCTCTTGTGATTTTGTGGCTGTGAGTAAAAAAAAAAAATTTC
AAGGGGTGAACAATGTGGAGACCAAGGTTGCTATGGCTAAGGGTCCGATT
CGGATGACCCAGCCCGGTATGGCTTGGTCACCATGTAGCGTGGGCGCGGG
ACGGGCAGGGGCCGTCGCAATTGTCACCTCTCCTTTTGCTTTACCCAAAA
CGTGTTCCCCCCATCGCACGTTAATACCAAGTGTTGTGGTACTGCATGTA
GCCCTACTTCGTAGCTGGACGCATGACCACGATGCTTACCGGTATAATAT
CGACATGGGGTCAAATAGCATTTTTTTCGTGTCTGCTGGTCTCCCGTGAT
GGTGCACGGCCGAACGCCCTGAGCAAGCCATTTTCAACAGACGACGGGCT
TGATTGTGTCTATTTTTGTTGTTGACCGTTAATCCTGGACCCTTCACCCT
TTCACTCTCGCGATGTCCTCCGTATGTTCTGCTGCTGGCGTCCCCCAACA
GCCGGCGAAGATGCAGAAGCGAATGGACCAGCAGGCTAAGAAGAAAGAAT
TGGAGGAATTGCGGTGAGAGGGCTCTCATAATATTACCAATGACAATAGA
ATCACCCTCCGTGACTAGTCGCCTTGTGGAATCGATGGATACGGATGAAC
ATGGCTGCTGAAGATATCGATGTGAAGGCCATCTTGGCTTTTCCGTGAAC
CAACCAATGCACGCGCTTTTGGTGTGTAGGAAGCCTAACATTTGGTTGCA
ATTTGATGAGCACTTTTTTTTTTGTTCCATTAGAAATTGAATCATCAAGA
TGGATGTGAAGTTCATCAAGTATTGTCATAATTTTTTGTTAGGTGCCTGT
TTCGGCTTTGTGAGTCTTTCAAACAGTACAGGGCGTTTGCGCATGATAAA
GATCTTGAGTCAATCTTGAGCGTTGTCCTTCTTTGGGTCCGCCGTTATAT
TTGGCTGAGAATGAACCTCGCGGCCTTGCAACCCCAGGATGTCTACAGGG
CGTTTTGGGTATTGTGACAACCTTATCCAGCATAGTTTGAAACGAGGTTG
TATTTCATCTTAGTCTGGGACCTTGACTGTTGATTATACTTGGGTGTGGT
TTATCTCTTGTAGTGGCCATTCATTGTACATGTGTCCTCTGTGTGATGAA
GTCCCGAAGTCCATCCTTTGGTAAAGGTTGATGGAGCCTAGCCTCATTCT
TTCTCGAGTAGATTTTGAAACGAGCGAAATGAAAGACGAAGAGAGAGTGC
CGCGACGCTGTCGGATGGCGTTGAATGCACCAAGAAATCGAATTCGTTGT
GCCCAAACACGCTAGTATTTCATGGGTGTTGGGCGTATCCGATCCCCTCG
TTCTCCGGTGCCGGCGCCTAACTGGTTATAACTAGCAGCTATTTTGCTAT
TACACTTTCATCCACGCCATTTTTTCTCATACCCTGCGGTGTGTCTTGTC
TGTGCCCCCCCTTTTCCTGACTTGGCGGTTGTTGCGCTTTTTTTTCTTGT
TCTATGTGTTTCAGAGCAAAATTGAAGGTGGCGAAGGAAACAGACGAGGA
GGGCGAAACGCCAGCGGCAAAATAG
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Coding sequence (CDS) from alignment at H-paniculata_contig12490:565..6439-

>mRNA_H-paniculata_contig12490.1561.1 ID=mRNA_H-paniculata_contig12490.1561.1|Name=mRNA_H-paniculata_contig12490.1561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig12490:565..6439- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGCTGCCGCCAGAGGTCAACAGAGCCGTGTACGTCAGATGCGGCTG
CCGCCAGAGGTCAACAGAGCCGTGTACGTCAGAAACTTGCCGTTCAAGAT
CTCTGCGGATGAAATGTACGACATCTTTGGGAAGTACGGGGCTATCCGAC
AGAAACTTGCCGTTCAAGATCTCTGCGGATGAAATGTACGACATCTTTGG
GAAGTACGGGGCTATCCGACAGATTCGCCTGGGGGACCGGCAAGATACGA
GGGGAACGGCGTTTGTGGTTTACGAAGACATCTACGACGCTAAAGCAGCG
GTGGATCACCTGAGCGGTTTCAATGTGTGCGGTCGATATCTTATCGTCCT
CTATTACCAGATTCGCCTGGGGGACCGGCAAGATACGAGGGGAACGGCGT
TTGTGGTTTACGAAGACATCTACGACGCTAAAGCAGCGGTGGATCACCTG
AGCGGTTTCAATGTGTGCGGTCGATATCTTATCGTCCTCTATTACCAGCC
GGCGAAGATGCAGAAGCGAATGGACCAGCAGGCTAAGAAGAAAGAATTGG
AGGAATTGCGCCGGCGAAGATGCAGAAGCGAATGGACCAGCAGGCTAAGA
AGAAAGAATTGGAGGAATTGCGAGCAAAATTGAAGGTGGCGAAGGAAACA
GACGAGGAGGGCGAAACGCCAGCGGCAAAATAGAGCAAAATTGAAGGTGG
CGAAGGAAACAGACGAGGAGGGCGAAACGCCAGCGGCAAAATAG
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