mRNA_H-paniculata_contig12471.1550.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 365 bits (938), Expect = 9.700e-122 Identity = 161/263 (61.22%), Postives = 192/263 (73.00%), Query Frame = 1 Query: 7 NMEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 ++ YCPHC QS+GPAA+R R G WPH + GE NGNY E+D+++ RHG+CGDP QT EG NKY QENS YPVL T+AEG ++E+K+V+STYHWGH+E F+C+ADDLP GP+ +VTQ CFN+YPLDRA DD PID + GR+ +DPPCRA ETDQ GA GDV TAR+QLP G+TCERC +QM YYTGNSC H GY EFNPPSWPS CAP+K DWI G CGDGD+YPEEFWNCAD+ Sbjct: 50 DINYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADV 296
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 362 bits (930), Expect = 2.410e-120 Identity = 171/336 (50.89%), Postives = 206/336 (61.31%), Query Frame = 1 Query: 1 FENMEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHW-----------------------------------------------------------------------GHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 + ++ +CPHC QS+GP+AVR R E T+ L YG G WPHL SY R E+ NGNYYE ++ISVRHG+CGDP QT+ EG N Y QENS YPV G ++EG ++E+K+V+STYHW GHLEFFICNA+D+ P+G+VTQGCFN +PLDRA DDGDASPID +H+GRY++DPPCRA ETDQ GA GDV TARY+LP GLTC RC +QMVYYTGN+C HPGY+EF+P S P CAP KEDW+ GMCG+ YPEEFWNCADI Sbjct: 29 YSDINWCPHCFQSRGPSAVRERGEENTEEAVLAMYGRGEWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDM-SDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADI 363
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 353 bits (905), Expect = 5.640e-119 Identity = 157/263 (59.70%), Postives = 190/263 (72.24%), Query Frame = 1 Query: 7 NMEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 ++ YCPHC QS+GPAAVR R G WPH + GE NGNY E+++++ RHG+CGDP QT E NKY QENS YPV T+AEG ++E+K+V+STYHWGH+E F+CNA +LPGGP+ VTQ CFN++PLDRA DD P D ++ GR+ +DPPCRA ETDQ+ GA DV TAR++LP GL+CERC +QMVYYTGNSC H GY EFNPPSWPS CAP+K DWI G CGDGD+YPEEFWNCADI Sbjct: 53 DINYCPHCFQSRGPAAVRARG------------GDKPWPHFN----GERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADI 299
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 351 bits (900), Expect = 2.140e-116 Identity = 156/263 (59.32%), Postives = 189/263 (71.86%), Query Frame = 1 Query: 7 NMEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 ++ YCPHC QS+GPAA+R R G WPH + GE NGNY E+D+++ RHG+CGDP QT EG NKY QENS YPVL T+AEG ++E+K+V+STYHWGH+E F+C+ADDLP GP+ +VTQ CFN++PLDRA DD PID + GR+ +DPPCRA ETDQ GA GDV TAR+QLP G+TCERC +QM Y+ NSC H GY EFNPPSWP CAP+K DWI G CGDGD+YPEEFWNCAD+ Sbjct: 21 DINYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAENGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADV 265
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 347 bits (891), Expect = 2.560e-116 Identity = 154/265 (58.11%), Postives = 186/265 (70.19%), Query Frame = 1 Query: 1 FENMEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 FE MEYCP C ++GP V+ R TDP L YG G WP +Y +GE+ NGNY E D+I+ RHG+CGDP Q + EG N Y+ N +P+L T+ EG V+E+K+ M+ YHWGH+EFFICNAD++ P+GI Q CFN YPL RA D + SPID N+ GRY+VDP CR ETDQ+KP GA+ G V+ A YQLP GLTC+RC +QM YYTGNSC H GYEEF P SWPS CAP K DWI LD +CG+ SYPEEFW CAD Sbjct: 11 FERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMED-PDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADF 274
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 351 bits (900), Expect = 1.310e-115 Identity = 157/262 (59.92%), Postives = 187/262 (71.37%), Query Frame = 1 Query: 10 MEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 + +CPHC QS+GPAA+R R+ G WPH +G NGNY E+D+++ RHG+CGDP QT EGDNKY +EN YPVLGT+AEG V+E+K+++STYHWGH+E F+C+ DLP G + IVTQ CFN YPLDRA DD PID + GR+ +DPPCRA ETDQ GA GDV TARYQLP G+ C+RC +QMVYYTGNSC H GY EFNP SWPS CAP+K DWI G CGDGD+YPEEFWNCADI Sbjct: 58 VNFCPHCYQSRGPAAIRERS------------GDKPWPHY----QGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADI 303
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 355 bits (912), Expect = 4.200e-115 Identity = 159/263 (60.46%), Postives = 189/263 (71.86%), Query Frame = 1 Query: 7 NMEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 ++ YCPHC QS+GPAA+R R G WPH + GE NGNY E+++++ RHG+CGDP QT E NKY ENS YPVL T+AEG ++E K+V+STYHWGH+E F+C+ADDLPGGP+ VTQ CFN++PLDR DD SPID ++ GR+ +DPPCRA ETDQ GA GDV TAR++LP GLTCERC +QMVYYTGNSC H GY EFNP SWPS CAP K DWI G CGDGD+YPEEFWNCADI Sbjct: 52 DINYCPHCFQSRGPAAIRARG------------GDKPWPHFN----GERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADI 298
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 348 bits (893), Expect = 2.830e-110 Identity = 156/263 (59.32%), Postives = 188/263 (71.48%), Query Frame = 1 Query: 7 NMEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 N+ YCPHC QS+G AAVR R G WPH + G+ NGNY E+++++ RHG+CGDP QT EG N Y ENS YPVL T+AEG ++E K+V+STYHWGH+E F+C+A+DLPGGP+ VTQ CFN++PLDR DD SPID ++ GR+ +DPPCRA ETDQ GA GDV TAR++LP G++CERC +QMVYYTGNSC H GY EFNP SWPS CAP K DWI G CGDGD+YPEEFWNCADI Sbjct: 52 NINYCPHCFQSRGAAAVRARG------------GDQPWPHFN----GDRAANGNYIESEEVAQRHGICGDPEQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADI 298
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 301 bits (771), Expect = 8.330e-97 Identity = 142/262 (54.20%), Postives = 174/262 (66.41%), Query Frame = 1 Query: 10 MEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGMCGDGDSYPEEFWNCADI 795 +E+CPHC ++GP V+ RA D L+ YGGG Y GE NGNY ET++I+ RHG+CGDP Q EG N Y+ N + L +F G V+EM +VM+ YHWGH EFF+CN DD+ P+G+ TQ CFN +PL RA DDGDASPID N+ GRY+VDP CR EET+QS + + G + RY LP + CE C +QMVYYTGN+C H GYEEFNP SWPS CAPNK DWI LD +CG YPEEFW C+D Sbjct: 46 VEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGE--EFPLYF-GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDD-PDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQS--SNSIEGYNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDF 300
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 296 bits (757), Expect = 8.400e-96 Identity = 133/213 (62.44%), Postives = 159/213 (74.65%), Query Frame = 1 Query: 160 NGNYYETDKISVRHGLCGDPGQTQLEGDNKYAQENSVYPVLGTFAEGSVVEMKVVMSTYHWGHLEFFICNADDLPGGPNGIVTQGCFNKYPLDRAADDGDASPIDSNHLGRYFVDPPCRAEETDQSKPAGAETGDVVTARYQLPGGLTCERCTIQMVYYTGNSCHHPGYEEFNPPSWPSECAPNKEDWITLDPGM-CGDGDSYPEEFWNCADI 795 NGNY ++D +T EG N+Y QENS YPVL T+AEG ++E+K+V++TYHWGH+E F+C+ADDLP GP+ +VTQ CFN+YPLDRA DD SPID + GR+ +DPPCRA ETDQ GA GDV TAR+QLP G+TCERC +QMVYYTGNSC H GY EFNPPSWPS CAP+K DWI G CGDGD+YPEEFWNCAD+ Sbjct: 49 NGNYIQSD-------------ETAAEGSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADV 248 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12471.1550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12471.1550.1 >prot_H-paniculata_contig12471.1550.1 ID=prot_H-paniculata_contig12471.1550.1|Name=mRNA_H-paniculata_contig12471.1550.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=262bp MEYCPHCMQSKGPAAVRVRAEAMTDPTELETYGGGRWPHLDSYMRGELLPback to top mRNA from alignment at H-paniculata_contig12471:57..2549+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12471.1550.1 ID=mRNA_H-paniculata_contig12471.1550.1|Name=mRNA_H-paniculata_contig12471.1550.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2493bp|location=Sequence derived from alignment at H-paniculata_contig12471:57..2549+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12471:57..2549+ >mRNA_H-paniculata_contig12471.1550.1 ID=mRNA_H-paniculata_contig12471.1550.1|Name=mRNA_H-paniculata_contig12471.1550.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1572bp|location=Sequence derived from alignment at H-paniculata_contig12471:57..2549+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |