mRNA_H-paniculata_contig12467.1546.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE) HSP 1 Score: 116 bits (291), Expect = 2.940e-28 Identity = 61/106 (57.55%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 1 MATTAEGHFVDVFQTPQTLGTGSCLVTTVLWLSIGRLLGLHCVNGARPCKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFSR 318 MA AEG FVDV PQT G GS LV T LWL++ RL + G R KRLHLQ+DNCVGENKNNI++ F+ L+ G+I +V F++VGHTHIKIDQ+FSR Sbjct: 101 MAVQAEGAFVDVHFVPQTTGGGSNLVCTALWLALKRLSAMGTKPGQR-FYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 205
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5KK38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK38_9PHAE) HSP 1 Score: 112 bits (281), Expect = 8.020e-27 Identity = 60/106 (56.60%), Postives = 72/106 (67.92%), Query Frame = 1 Query: 1 MATTAEGHFVDVFQTPQTLGTGSCLVTTVLWLSIGRLLGLHCVNGARPCKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFSR 318 MA AEG FVDV PQT G GS LV T LWL++ RL + G R KRLHLQ+DNCVGENKNNI+M F+ L+ G+I +V F++VGHTH K DQ+FSR Sbjct: 216 MAVQAEGAFVDVHFVPQTTGGGSNLVCTALWLALKRLSEMWNKPGER-FHIKRLHLQLDNCVGENKNNIVMAFIGGLVAAGVIGSAEVCFLIVGHTHTKTDQVFSR 320
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE) HSP 1 Score: 102 bits (253), Expect = 5.420e-23 Identity = 51/108 (47.22%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 1 MATTAEGHFVDVFQTPQTLGTGSCLVTTVLWLSIGRLLGLHCVNGARP--CKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFSR 318 MA EG FV+V+ TPQ LG G L T L+I R++ + + P C + H QVDNCV ENKNN +G+ +L+ ++ VV+++FMMVGHTH KIDQ+FSR Sbjct: 165 MAVHIEGQFVEVYFTPQYLGGGCNLACTAAHLAITRIIDKYHDSPPHPSGCIIQHAHWQVDNCVSENKNNFFLGYAGLLVAADVVRVVEIHFMMVGHTHTKIDQVFSR 272
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 6.530e-22 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 1 Query: 64 GSCLVTTVLWLSIGRLLGLHCVNGARPCKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFSR 318 GS LV T LWL++ RL + G R KRLHLQ+DNCVGENKNNI++ F+ L+ G+I +V F++VGHTHIKIDQ+FSR Sbjct: 10 GSNLVCTALWLALKRLSAMWTKPGQR-FYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 93
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 7.710e-21 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 1 Query: 64 GSCLVTTVLWLSIGRLLGLHCVNGARPCKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFSR 318 GS LV T LWL++ RL + G R KRLHLQ+DNCVGENKNNI++ F+ L+ G+I +V F++VGHTHIKIDQ+FSR Sbjct: 10 GSNLVCTALWLALKRLSAMWTKPGQR-FYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 93
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5JAR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAR9_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 1.810e-19 Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 1 Query: 64 GSCLVTTVLWLSIGRLLGLHCVNGARPCKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFSR 318 GS L T LWL++ RL + G R KR HLQ+DNCVGENKNNI+M F+ L+ G+I +V F+++GHTHIKIDQ+FSR Sbjct: 10 GSNLECTTLWLALKRLSAMWTKPGER-FHIKRRHLQLDNCVGENKNNIVMAFIGGLVAAGVIGFAEVCFLILGHTHIKIDQVFSR 93
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5KUA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA0_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 2.350e-17 Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 133 GARPCKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFSR 318 G RP + R +QVDNCV ENKN+I++G+L L+ GII V+V FM VGHTHIKIDQ+FSR Sbjct: 6 GKRPYIY-RFTIQVDNCVSENKNHIVIGYLGSLVAQGIIGEVEVQFMPVGHTHIKIDQVFSR 66
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5JTH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH9_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 6.360e-17 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 46 PQTLGTGSCLVTTVLWLSIGRLLGLHCVNGARPCKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFSR 318 P L GS LV T LWL++ RL + G R KRLHLQ+ NCVGE KNNI++ F+ L+ G++ +V F++VGHT IKID +FSR Sbjct: 278 PALLCGGSNLVCTALWLALKRLSAMWAKPGQR-FYIKRLHLQLHNCVGEKKNNIVLAFIGGLVAAGVVVSAEVCFLIVGHTLIKIDHVFSR 367
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5KL03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL03_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 4.160e-16 Identity = 50/106 (47.17%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 19 GHFVDVFQTPQTLGTGSCLVTTVLW-------LSIGRLLGLHCVNGARPCKFKRLHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFS 315 G ++VF PQ LGTG+ LV T L+ LS G LG + +QVDN V ENKNN +MG LA ++ GI+ V + FMMVGHTHI+IDQIFS Sbjct: 174 GVVMNVFFAPQILGTGTNLVATALYYQFMELTLSWGHTLG-------------DVTVQVDNTVSENKNNYLMGILAAMVGRGIMRTVTLCFMMVGHTHIQIDQIFS 266
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.450e-15 Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 19 GHFVDVFQTPQTLGTGSCLVTTVLWLSIGRLLGLHCVNGARPCKFKR----LHLQVDNCVGENKNNIMMGFLAMLMWNGIIDVVDVNFMMVGHTHIKIDQIFS 315 G + VF PQ LGTGS +V T L+ L ++K + +Q+DN V ENKNN +MGFLA L+ G++ V + FMMVGHTHI+IDQ+FS Sbjct: 444 GIMMQVFMIPQILGTGSNMVCTTLFTLFMEL----------TLQWKHSLGDVFIQMDNTVSENKNNFIMGFLAALVGRGVMRSVTLCFMMVGHTHIQIDQVFS 536 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12467.1546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12467.1546.1 >prot_H-paniculata_contig12467.1546.1 ID=prot_H-paniculata_contig12467.1546.1|Name=mRNA_H-paniculata_contig12467.1546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp MATTAEGHFVDVFQTPQTLGTGSCLVTTVLWLSIGRLLGLHCVNGARPCKback to top mRNA from alignment at H-paniculata_contig12467:5164..6009- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12467.1546.1 ID=mRNA_H-paniculata_contig12467.1546.1|Name=mRNA_H-paniculata_contig12467.1546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=846bp|location=Sequence derived from alignment at H-paniculata_contig12467:5164..6009- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12467:5164..6009- >mRNA_H-paniculata_contig12467.1546.1 ID=mRNA_H-paniculata_contig12467.1546.1|Name=mRNA_H-paniculata_contig12467.1546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=642bp|location=Sequence derived from alignment at H-paniculata_contig12467:5164..6009- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |