mRNA_H-paniculata_contig12450.1537.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12450.1537.1
Unique NamemRNA_H-paniculata_contig12450.1537.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO)

HSP 1 Score: 177 bits (448), Expect = 8.850e-43
Identity = 111/307 (36.16%), Postives = 170/307 (55.37%), Query Frame = 2
Query: 1124 MEGVGEKRTWESED--PGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF---------------------------QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVI-ARRREKVDEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKILHPKSSSRRISHSFEYRDMVGSLMYALTGTRPDIAYAVHQAAR 1954
            M+ + +  TW+  D  PG  P+G KMI     F+RK+K DG+V ++KARLV QG  Q EG DFF T APVAR+ST+R + +LAA H      +DV  A LN  ++EE++                           Q+ + W+   ++ ++  G   +  D CLY   D  G+  +++ +YV+D++I    +++VDE K  +S +F MKD G    +L I+I+  R N  I+ISQ  YI ++L+++ F +C  V  P++  +K+L  K  +       EY   +GSLMYA+  TRPDIAYAV + +R
Sbjct:  561 MDSIMQNNTWKLVDLPPGCKPLGCKMI-----FRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGNENKVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLYSKFDTHGK-GVIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIK--RGNNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLLPNKGVA---VSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSR 856          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: C6JRI2_SORBI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C6JRI2_SORBI)

HSP 1 Score: 174 bits (442), Expect = 9.020e-43
Identity = 100/305 (32.79%), Postives = 160/305 (52.46%), Query Frame = 2
Query: 1124 MEGVGEKRTWESEDPGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF---------------------------QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVIARRREKV-DEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKILHPKSSSRRISHSFEYRDMVGSLMYALTGTRPDIAYAVHQAAR 1954
            M+ +    TWE  D    P G K +  K  FK+KL+ DG++ ++KARLVA+G +Q EGED+F T +PVAR++T+R + SLAA HGF    +DV  A LN  +EEE++                           Q+ + W+   +  L   G   +  D C+Y+    GG   +++ +YV+D++I     KV  E K  +S  F MKD G    ++ I++  +  NG + + Q  Y+ +VL R+G+ EC     P +  +++   + + R       Y  ++GSLMY  + TRPDI++AV + +R
Sbjct:  209 MDSIMSNGTWEVVD---RPFGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDYFDTYSPVARLTTIRVLLSLAASHGFLIHQMDVKTAFLNGELEEEIYMDQPDGFIANGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRF--GGGDGVILCLYVDDILIFGNNLKVIKEVKEFLSNNFEMKDLGEADVIVNIKLSREEGNGWVTLMQSHYVEKVLNRFGYSECTPAPTPYDPSVRL---RKNHRIARDQLRYSQIIGSLMYLASATRPDISFAVSKLSR 505          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 177 bits (448), Expect = 9.780e-43
Identity = 109/306 (35.62%), Postives = 164/306 (53.59%), Query Frame = 2
Query: 1124 MEGVGEKRTWESEDPGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF-------------------------QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVIARRREKV-DEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKIL---HPKSSSRRISHSFEYRDMVGSLMYALTGTRPDIAYAVHQAAR 1954
            ++G+G   TWE +D   LP  R  +  K  F+RK  ++G VV++KARLVAQG SQ+ G DF +T APV R+ ++R + +LA  + +E   +DV  A LN  ++EE++                         QSGR WN  L+  L  +G +R   DPC+Y    + GE  I + V+V+DL++     K+ +E K ++   F + D G   +++ IEI  DR  G I ISQ  YI  +LKRY  +    V +P++  +        + +  R++    Y  MVGSLMYA  GTRPDI+YAV   ++
Sbjct:  933 LQGMG---TWELQD---LPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQI-ITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDENEEADDRLAGG--YASMVGSLMYAAVGTRPDISYAVQTLSK 1229          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: A0A177U3B2_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177U3B2_9BASI)

HSP 1 Score: 172 bits (436), Expect = 1.050e-42
Identity = 110/301 (36.54%), Postives = 158/301 (52.49%), Query Frame = 2
Query: 1139 EKRTWESEDPGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF-------------------------QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVIARRREK-VDEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKILHPKSSSRRISHS-FEYRDMVGSLMYALTGTRPDIAYAVHQAARRM 1960
            E RTWE   P   P GRK+I  +  +K K   +G  +R K+RLVAQG SQVEG D+ +T APVAR+S LR + +LA + G     +DV  A LN  ++ +L+                         QSGR W + L D ++  G  +  T+PCL+F   E G   I+++VYV+D+ IA   E+ V E K   +  F+M D G L+ +L I I          +SQ GY+ ++L+RYG  +C+    P+   MK L P+  S        E+  +VG L++   GTRPDIA+ V + AR M
Sbjct:   49 EMRTWELAHP---PQGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGFSQVEGIDYDETFAPVARLSALRMMVTLAIQLGLAMHGMDVKTAYLNGELDVDLYMKQPPGYDDGLGRACKLLRTLYGLKQSGRYWYHKLRDRVLEAGFTQLKTEPCLFFRWTESGP--IIILVYVDDVAIAAPTEEMVAEIKRQFTTWFKMTDNGPLTSMLGIRIHRSTCGRVATMSQSGYVSQILQRYGMADCKPAKTPMADAMKNLGPRVGSMATEKERHEFAALVGCLLWLAQGTRPDIAFQVGKLARFM 344          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 173 bits (438), Expect = 2.040e-42
Identity = 104/306 (33.99%), Postives = 168/306 (54.90%), Query Frame = 2
Query: 1124 MEGVGEKRTWESEDPGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF---------------------------QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVV-VYVNDLVIARRR-EKVDEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKILHPKSSSRRISHSFEYRDMVGSLMYALTGTRPDIAYAVHQAAR 1954
            M+ + E   WE  +   LP  RK +  K  FK K   DGS+ RHKARLVAQG SQ  G D+ +T +PV R  ++RTV +L+ + G +   +DV AA LN  +E+E++                           QS R WN+ L++ L  IG  ++ +DPC+Y   ++G   NI VV ++V+D+++A +  EK+ + K +I+ RF++KD G L  +L +++  +  +  + I Q  Y   ++K+YG + C+ V  PV+   K++     S   +   E++  VGSL+Y  + TRPDI +AV+  A+
Sbjct:  169 MDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG---NIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKE-EHQSAVGSLLYLSSATRPDITFAVNNVAK 465          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 175 bits (444), Expect = 3.030e-42
Identity = 107/290 (36.90%), Postives = 162/290 (55.86%), Query Frame = 2
Query: 1148 TWESEDPGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF-------------------------QSGRNWNNTLNDFLVGI-GLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVIARRREKVDEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKILHPKSSSRRISHSFEYRDMVGSLMYALTGTRPDIAYAV 1939
            TW+    G LP GRK I +K  F  K  +DGS+ ++KARLVAQG SQ+ G+D+F T +PV R  T R   +LAA    + + +D+  A L+ P+EEE++                         Q+GR WN+ LN  L  + G  RS  DPCLYF  +  G+ N + +V+V+D  +   R  +D FK ++++ F +   G+LS  + +++   R+NG I+I Q  Y+  +L+R+G  +C+ V  P++  +K L P    +  +    Y   +GSLMYA TGTRPDIA+AV
Sbjct:  863 TWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQVYVLIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHE--GKLN-MALVHVDDTALYGERSILDRFKADVAKHFAITTNGTLSSFVGLQV--TRKNGAISILQTRYLETILERFGMQDCKPVSTPLDPGVK-LEPTPEDQTPA-DVPYAAAIGSLMYAATGTRPDIAFAV 1142          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 173 bits (438), Expect = 1.900e-41
Identity = 107/287 (37.28%), Postives = 158/287 (55.05%), Query Frame = 2
Query: 1175 LPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF-------------------------QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVIARR-REKVDEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKIL------HPKSSSRRISH-SFEYRDMVGSLMYALTGTRPDIAYA 1936
            +P G K I +K   K K   +G++ R+K R+VA+G +Q EG D+ +  APVA + ++R + +LAA+H  E + +DV  A LN  + E+L+                         Q+GR WN T +  L  +G  R   + CLY  R EGG+   LVV YV+DL++A   R  +DE K  ++  F+M+D G  S VL I+IR DRR   I +SQ  YI  VLKR G ++C+ V  P+  + ++       +   +   I++ +  Y  +VGSLMYA+ GTRPDIAYA
Sbjct: 1040 IPEGVKPITSKIVPKIKFDANGNIERYKIRIVARGFTQREGVDYQEVFAPVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYLLPPDGVDIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLVV-YVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYA 1325          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: A0A0V1HEM8_TRIPS (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1HEM8_TRIPS)

HSP 1 Score: 169 bits (428), Expect = 2.070e-41
Identity = 106/273 (38.83%), Postives = 154/273 (56.41%), Query Frame = 2
Query: 1139 EKRTWESEDPGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF-QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVIARRREKV-DEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKM---KILHPKSSSR-RISHSFEYRDMVGSLMYALTGTRPDIAYAV 1939
            E ++WE   P  LP  +K+I +K  FK K KEDG++ + KARLVA+G SQ++G D+  T AP    S+LR + SLAA++  E + +DV  A LN  + EE++ ++ R W   L+D L   GL R   +PC+YF R    +  + V VYV+DL+I    E   +E K  + +RF++KD G     L I I  D  NGT +I Q  YI E+L R+   +C+GV  P++      K + P+S    +  H+  YR  VG L+Y     RPDI + V
Sbjct:  180 ENQSWE---PAVLPPHKKVIKSKWVFKTKYKEDGTIEKRKARLVARGYSQLQGIDYEGTFAPTLGYSSLRYLLSLAAKNNLEVDQMDVVTAFLNLSLNEEIYREASRAWYGELDDTLRSFGLNRLKKEPCIYFLRKN--KIFLAVGVYVDDLLILSNNESAKNELKIALCKRFKIKDLGKAHWCLGIRIVQDVENGTQSIDQEQYIEEMLHRFKMSDCKGVKTPLDPNQVLSKAMMPRSDEETKQMHAVPYRVAVGCLVYLSQSCRPDICHTV 447          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 172 bits (437), Expect = 2.230e-41
Identity = 106/303 (34.98%), Postives = 158/303 (52.15%), Query Frame = 2
Query: 1148 TWESEDPGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF-------------------------QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVI-ARRREKVDEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKILHPKSSS--------RRISHSFEYRDMVGSLMYALTGTRPDIAYAVHQAAR 1954
            TWE +D   LP  RK I  +  F RK  E+G ++R+KARLVAQG SQ+ G DF  T APV R  +LR + ++AA    E + +DV  A LN  + EE+F                         QSGR WN  L+  L  +   +S  D C+Y  R E G T+  + V+V+DL+I   + ++++E K  + + F + D G    ++ +E++ DR+  TI++ Q  Y+  +LK+YG + CR V  P++  + +     +         R       Y   VGSLMYA  GTRPDIAYAV + ++
Sbjct:  759 TWELDD---LPPERKAIGCRWVFLRKYNENGEIIRYKARLVAQGFSQIPGMDFDGTFAPVMRHDSLRALLAIAAIKNLEIQQLDVKGAYLNGDLREEIFMRQPDGFHDGTSKVCRLKKTLYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYI-RTENGHTSY-ITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGGRYAAAVGSLMYAAIGTRPDIAYAVQKLSK 1056          
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI)

HSP 1 Score: 172 bits (436), Expect = 3.040e-41
Identity = 96/299 (32.11%), Postives = 165/299 (55.18%), Query Frame = 2
Query: 1124 MEGVGEKRTWESEDPGRLPVGRKMIYTKCTFKRKLKEDGSVVRHKARLVAQGSSQVEGEDFFKTNAPVARMSTLRTVFSLAAEHGFEFEDVDVDAACLNAPVEEELF-------------------------QSGRNWNNTLNDFLVGIGLQRSTTDPCLYFSRDEGGETNILVVVYVNDLVIARRRE-KVDEFKHNISRRFRMKD*GSLSRVLRIEIRHDRRNGTIAISQGGYIREVLKRYGFDECRGVLIPVEGKMKILHPKSSSRRISHSFEYRDMVGSLMYALTGTRPDIAYAVH 1942
            ++ + +  TW       LP GRK++ TK  FK K    GSV ++KARLVAQG SQ EG D++ T +PVA+++TLRT+ ++A +  +  + +DV  A L   + E+++                         Q+ + W+   ++++  +GL++S +D CLY   +      I +++YV+D++IA     K+ E K  +   F M+D G L+  L ++I +D+  G + I+Q  Y+ +VLK++  D C  +  P+E K+ I        +   +  YR +VGSLMYA+ G+RPD++YA++
Sbjct:  794 IDSLKKNNTWTLS---HLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMIFKLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNI----EEDNKQECNQPYRQLVGSLMYAMLGSRPDLSYALN 1085          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12450.1537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A445HPU2_GLYSO8.850e-4336.16Retrovirus-related Pol polyprotein from transposon... [more]
C6JRI2_SORBI9.020e-4332.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GYH9_9APHY9.780e-4335.62Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A177U3B2_9BASI1.050e-4236.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9HZ03_PARCT2.040e-4233.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q45W64_PHACR3.030e-4236.90Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A409WVI7_9AGAR1.900e-4137.28Integrase catalytic domain-containing protein (Fra... [more]
A0A0V1HEM8_TRIPS2.070e-4138.83Retrovirus-related Pol polyprotein from transposon... [more]
A0A067T5Q4_GALM32.230e-4134.98Integrase catalytic domain-containing protein (Fra... [more]
J9KJ72_ACYPI3.040e-4132.11Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12450contigH-paniculata_contig12450:3920..6282 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score71.6
Seed ortholog evalue4.4e-10
Seed eggNOG ortholog65672.G4TQF2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons4
Model size1963
Cds size579
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12450.1537.1prot_H-paniculata_contig12450.1537.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12450 4421..5244 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928964.64433-UTR-H-paniculata_contig12450:3919..44201622928964.64433-UTR-H-paniculata_contig12450:3919..4420Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12450 3920..4420 +
1691480684.3685226-UTR-H-paniculata_contig12450:3919..44201691480684.3685226-UTR-H-paniculata_contig12450:3919..4420Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12450 3920..4420 +
1622928964.6934242-UTR-H-paniculata_contig12450:5244..56081622928964.6934242-UTR-H-paniculata_contig12450:5244..5608Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12450 5245..5608 +
1691480684.3982577-UTR-H-paniculata_contig12450:5244..56081691480684.3982577-UTR-H-paniculata_contig12450:5244..5608Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12450 5245..5608 +
1622928964.7092867-UTR-H-paniculata_contig12450:5692..60831622928964.7092867-UTR-H-paniculata_contig12450:5692..6083Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12450 5693..6083 +
1691480684.4085908-UTR-H-paniculata_contig12450:5692..60831691480684.4085908-UTR-H-paniculata_contig12450:5692..6083Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12450 5693..6083 +
1622928964.72278-UTR-H-paniculata_contig12450:6154..62821622928964.72278-UTR-H-paniculata_contig12450:6154..6282Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12450 6155..6282 +
1691480684.4159145-UTR-H-paniculata_contig12450:6154..62821691480684.4159145-UTR-H-paniculata_contig12450:6154..6282Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12450 6155..6282 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928964.6580927-CDS-H-paniculata_contig12450:4420..46201622928964.6580927-CDS-H-paniculata_contig12450:4420..4620Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12450 4421..4620 +
1691480684.381002-CDS-H-paniculata_contig12450:4420..46201691480684.381002-CDS-H-paniculata_contig12450:4420..4620Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12450 4421..4620 +
1622928964.6784728-CDS-H-paniculata_contig12450:4865..52441622928964.6784728-CDS-H-paniculata_contig12450:4865..5244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12450 4866..5244 +
1691480684.3893764-CDS-H-paniculata_contig12450:4865..52441691480684.3893764-CDS-H-paniculata_contig12450:4865..5244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12450 4866..5244 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12450.1537.1

>prot_H-paniculata_contig12450.1537.1 ID=prot_H-paniculata_contig12450.1537.1|Name=mRNA_H-paniculata_contig12450.1537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MTPSKMITTNMGRRYWAKAARGTVYCFNRAPTRPHNGGTPYEKWHGTTPK
LEHFHVFGCTAYGMFQSGERGDVSNTEKTTSASPAASANPYSALSDDDNH
GDSDDSEVNHAEPEAEDTSSAETFASTFLRETRTESGTKERRWRDRSPIQ
IRARARENREEDSGATARVAKAEDTSNPSGYLRRSQNLRQKH*
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mRNA from alignment at H-paniculata_contig12450:3920..6282+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12450.1537.1 ID=mRNA_H-paniculata_contig12450.1537.1|Name=mRNA_H-paniculata_contig12450.1537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2363bp|location=Sequence derived from alignment at H-paniculata_contig12450:3920..6282+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGCTTCACAAGCGACTAGGGCACGTGCGCGATCTCCACACGGTCGCGCA GCAGCAAGGGATCAAGTTGCGCAGGAAGCTCGGCGCTTGTTCAGCATGTG AGCGAGGGAAGGCATCGAAGCAACGAGTAAAGAAGTATTGGGAAGAGCAG AAAACGGAGCGACTGGAGCTAGTGCATACTGACATCGCACGACCGGTAGA CTAATCTTTCGAGGGACGCCGTTTCGCCATTATCTTCGTGGACGACTACA GTCGAACGCGTAAGGTCTACGCCCTGAGACACAAATCAGCGGCGTTATGG GCTCTGAACCAGTTCGAGCGGGACATCGCGAAGGCAAACGGGCTACAAAT AAAACGTCTTCGGTCAGGTCAAGGAGGAAAGTCGACATGAGAAGCGTTCC GACAATTTTATGCAGAAAATGGCATAAAGCAAGATTTTTCTGCCGCCTAT ACGCCGCTGCAAAACGGTGTGGCGGAGCGAAGCTGGCGTAGAGTTTTGGA GATGACCCCAAGTAAGATGATCACCACCAACATGGGCCGCAGATATTGGG CGAAGGCGGCGCGTGGGACTGTGTACTGCTTCAATCGCGCCCCGACGCGA CCGCACAACGGAGGGACGCCGTATGAGAAATGGCACGGCACAACACCAAA GCTTGAGCACTTTCATGTCTTCGGCTGCACGGCGTATGGGATGTTCCAGT CGTAGCAGAGACGAAAACTCGATGACAAAGCATAGGTGGGGGTGCTTCTG GGGTCCAACGAAGACAGCCCGAGTTATCGCATAACCCGAAAAACAAGAGC GTCCAGTTGAGCAGGAACGTAAGATTTGATGTAAAGGATTTCGTAACCGG TCATCGTGGACAGCGAGAGCACGACGGGAAGTGAGACATGGAAGGCCTGT TTTCAGCACCGTCGGTCACACTAGCGGTCACGCGATCTCGCGTCAGAGGC GAGCGAGGAGACGTAAGTAACACAGAAAAGACGACGTCAGCGTCGCCAGC CGCCAGCGCCAACCCGTACAGCGCCTTGAGCGATGACGATAATCATGGAG ACAGTGATGACTCGGAGGTTAACCATGCTGAACCAGAAGCCGAAGATACA TCATCGGCGGAGACATTTGCGTCCACATTTCTGAGGGAAACACGGACAGA GTCAGGGACGAAGGAGCGGCGATGGCGAGATCGGTCACCAATACAGATTA GGGCGAGAGCGAGGGAAAACCGCGAAGAAGATTCAGGAGCTACCGCGCGC GTGGCTAAAGCGGAAGACACTAGTAACCCTTCAGGGTATCTGAGGAGGAG CCAAAATCTGCGGCAAAAGCATTGAAGAGTCCAGGCGCAGATAAATGGCG CGCGGCAATGGGGGAGGAATGGAGGGCGTTGGTGAAAAGAGGACGTGGGA GAGCGAGGACCCGGGGAGGTTACCGGTAGGGCGGAAGATGATTTATACCA AATGCACTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTGGTACGCCAC AAAGCGCGACTAGTGGCTCAAGGCTCTTCACAGGTGGAGGGTGAAGATTT CTTTAAAACCAATGCCCCCGTAGCTCGCATGTCGACGTTGCGTACTGTTT TCAGCCTGGCCGCCGAACATGGTTTCGAATTCGAAGACGTGGACGTAGAT GCGGCGTGTTTGAACGCCCCCGTAGAAGAAGAGCTGTTTGTTAAGCTACC CCCCGCGTTTTCCCCTTTCTTCCGAGACATACCATTTGCGCGCCGCTTGT GTAAAAGCCTTTATAGCCTCAAGCAGAGCGGCCGAAACTGGAATAACACT CTCAACGATTTTCTTGTTGGGATAGGACTCCAACGTTCCACTACCGACCC ATGCTTGTACTTTTCTCGCGACGAAGGGGGAGAGACAAACATTCTCGTGG TCGTTTATGTTAACGACCTGGTCATCGCTAGACGTCGTGAGAAAGTAGAC GAGTTCAAGCACAACATAAGTCGGCGTTTCAGGATGAAAGACTAGGGCTC CCTCTCGCGCGTGTTGAGAATAGAAATACGACATGACCGCCGTAATGGTA CCATAGCAATATCCCAAGGTGGCTACATCCGCGAGGTACTAAAAAGATAC GGTTTTGACGAGTGTCGAGGCGTGCTCATCCCTGTAGAGGGAAAAATGAA GATTTTGCACCCGAGTCGGCCGACAAGCCCCCCGTACCGAAACCACTTGG GGCTGTACTGTCGGACGTAGGCGCAAGTGTACAAGAAAGCAGTAGTAGAA GAATTAGCCATTCGTTTGAGTACAGAGACATGGTAGGGTCACTCATGTAC GCCTTAACAGGAACTAGACCTGATATAGCATACGCGGTACACCAAGCAGC ACGTCGTATGGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig12450:3920..6282+

>mRNA_H-paniculata_contig12450.1537.1 ID=mRNA_H-paniculata_contig12450.1537.1|Name=mRNA_H-paniculata_contig12450.1537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1158bp|location=Sequence derived from alignment at H-paniculata_contig12450:3920..6282+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCCCAAGTAAGATGATCACCACCAACATGGGCCGCAGATATTGGGC
GAAGGCGGCGCGTGGGACTGTGTACTGCTTCAATCGCGCCCCGACGCGAC
CGCACAACGGAGGGACGCCGTATGAGAAATGGCACGGCACAACACCAAAG
CTTGAGCACTTTCATGTCTTCGGCTGCACGGCGTATGGGATGTTCCAGTC
ATGACCCCAAGTAAGATGATCACCACCAACATGGGCCGCAGATATTGGGC
GAAGGCGGCGCGTGGGACTGTGTACTGCTTCAATCGCGCCCCGACGCGAC
CGCACAACGGAGGGACGCCGTATGAGAAATGGCACGGCACAACACCAAAG
CTTGAGCACTTTCATGTCTTCGGCTGCACGGCGTATGGGATGTTCCAGTC
AGGCGAGCGAGGAGACGTAAGTAACACAGAAAAGACGACGTCAGCGTCGC
CAGCCGCCAGCGCCAACCCGTACAGCGCCTTGAGCGATGACGATAATCAT
GGAGACAGTGATGACTCGGAGGTTAACCATGCTGAACCAGAAGCCGAAGA
TACATCATCGGCGGAGACATTTGCGTCCACATTTCTGAGGGAAACACGGA
CAGAGTCAGGGACGAAGGAGCGGCGATGGCGAGATCGGTCACCAATACAG
ATTAGGGCGAGAGCGAGGGAAAACCGCGAAGAAGATTCAGGAGCTACCGC
GCGCGTGGCTAAAGCGGAAGACACTAGTAACCCTTCAGGGTATCTGAGGA
GGAGCCAAAATCTGCGGCAAAAGCATTGAAGGCGAGCGAGGAGACGTAAG
TAACACAGAAAAGACGACGTCAGCGTCGCCAGCCGCCAGCGCCAACCCGT
ACAGCGCCTTGAGCGATGACGATAATCATGGAGACAGTGATGACTCGGAG
GTTAACCATGCTGAACCAGAAGCCGAAGATACATCATCGGCGGAGACATT
TGCGTCCACATTTCTGAGGGAAACACGGACAGAGTCAGGGACGAAGGAGC
GGCGATGGCGAGATCGGTCACCAATACAGATTAGGGCGAGAGCGAGGGAA
AACCGCGAAGAAGATTCAGGAGCTACCGCGCGCGTGGCTAAAGCGGAAGA
CACTAGTAACCCTTCAGGGTATCTGAGGAGGAGCCAAAATCTGCGGCAAA
AGCATTGA
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