mRNA_H-paniculata_contig12449.1535.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12449.1535.1
Unique NamemRNA_H-paniculata_contig12449.1535.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: D7FJ92_ECTSI (ER membrane protein complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ92_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 2.540e-136
Identity = 232/344 (67.44%), Postives = 266/344 (77.33%), Query Frame = 1
Query:    1 SLVLPSWA-NNAKILLHATRPKSALGFHPEVAIIALGEESTFVSWRDAITGAETMSEEFGYHVASALPLDVRDAEERSVLMLVDGEGGVYAAPSSPESVTGLSGLVPSLYHHNFSQEAGLQSFSVVKREAAGDAVL----LGSAPVASMPV-PNRSRVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATL----AEGE----GDGG-MAGKGQEMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            SL  PSW  + AK+LLHATR K ALG+ PEVA+IA+GE  T VS  DA+TG ET  EE    V SA+PL V+D +ER+++MLVD    V+A P S E+ + L GL+P L++H+ S E GL+SFSVV     GD+      LGSA VAS+P  P RS+VVA AY D RD VQTPAHTLGDDSLLIKYINPRL A ATL    AE E    GD G + GKGQE+TVT++D VSGR+LHRISHKGAAEPVHM VSESWVVYSYWSA S RTE+STLSLYEGMIDKYGLSPFNRPEWKE FSSFESRVPIVLQK+F+FP PVTALGI LTQ GIT+K+ILVGTA+GQV
Sbjct:  597 SLFRPSWMPSGAKVLLHATRSKGALGYSPEVAVIAVGEAKTVVSGLDALTGLETYREELDLKVDSAVPLGVKDGQERNIIMLVDSHRQVHAVPRSAEASSALRGLLPQLFYHSLS-ETGLESFSVVPSATGGDSDKDEGPLGSATVASVPFNPTRSKVVATAYPDGRDGVQTPAHTLGDDSLLIKYINPRLFAFATLCPEEAESEEWAGGDAGQLNGKGQELTVTLVDYVSGRVLHRISHKGAAEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAIGQV 939          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: A0A835YVX9_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVX9_9STRA)

HSP 1 Score: 209 bits (533), Expect = 3.400e-57
Identity = 144/394 (36.55%), Postives = 202/394 (51.27%), Query Frame = 1
Query:    1 SLVLPSWANNAKILLHATRPKSALGFHPEVAII-ALGEESTFVSWRDAITGAETMSE-EFGYHVASALPLDVRDAEERS---------------VLMLVDGEGGVYAAPSSPESVTGLSGLVPSLYHHNFSQEAGLQSFSVVK-------REAAGDAVLLGSAPVASMPVPNRS----RVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLAEGEGDGGMAGKGQEMTVTVLDS---------------------------------------------VSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDIL 963
            S +LP         + ATRP+S LG+ PE A+I A  E    + W DA+TGA + +       VAS +PLDV DAE R                VLMLVDG+  V  AP++ E     + L+PSL+HH    E GL++F+V         +    D        +AS+PV   S     VVA AY  RR+ +Q+PA  LGDDSLL+KY+NP L A+AT+ + +     A +    T+T+  S                                             VSGR+L+R+  +GA  PVH  +SE+ VV ++WS  ++RTE+ +LSLYEGMI +YGL P  +P+    FSSF++  P+VL +++  PH VTALG+ LT  GITAK ++
Sbjct:  546 SKLLPPSGGGVARRVVATRPRSVLGYAPEFALITADAEGGVELEWYDAVTGAASGAPLRLAGGVASVVPLDVHDAEGRQXXXXXXXXXXXXXXXVLMLVDGQKRVTLAPATREVYASAAPLIPSLFHHTLGDE-GLETFAVAPLTPELQLQLEVEDGDKWTPPSMASLPVGRASWGGEAVVATAYPLRREAIQSPAQVLGDDSLLLKYLNPHLAAVATMPKQQRSDSGAKRDVVATLTLRPSGRWCAKSDVGARLALWLVDTVVLTAPLMSAXXXXXXXXXXXXXXXVSGRVLYRLETQGAGLPVHCSISENNVVCTHWSVHARRTEVLSLSLYEGMIGRYGLGPTRQPQRAAHFSSFDAPPPVVLHRAYTLPHAVTALGLPLTSHGITAKSLV 938          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: A0A7S2DLI3_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLI3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.330e-51
Identity = 116/350 (33.14%), Postives = 181/350 (51.71%), Query Frame = 1
Query:   52 TRPKSALGFHPEVAII-------ALGEESTFVSWRDAITGAETMSEEFGYHVASALPLDVRDAEERSVLMLVDG---EGGVYAAPSSPESVTGLSGLVPSLYHHNFSQEAGLQSFSVVKRE-----AAGDAVLLGSAPVASMPVPNRSRVVAKA-YADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLAEG----------------------EGDGGMAGKGQEMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            TRP +  G  PEV +I       A    +T +++ DA+ G  T        V    PL   D + R V + + G   E        SPE+   +S L   L+ H    +AG      V+ +      +G       +   ++  P   + + +  Y    D V TPA  LGDDSLL+KY+N  L A+ T+ +                       +  GG +     + V+++D+V+GRILHR+ H  A+ P HM +SE+WVVYSYW+  + RTE+STLSLYEG+ID++GL+PF  PE +++F+S  +  P+V+Q++++FP  +T+L   +T RGIT+K++L+    GQV
Sbjct:  552 TRPDAIAGLRPEVMLIRPQSSVAATKLATTSITYVDALDGDITEEMTLPLVVTQLSPLPFTDKQHRRVFLAISGPETERMACIVSDSPEARKQMSKLRNKLFFHVIDHDAGTLESRHVEIDRGQVTTSGHMCYPSFSLATAVVAPEADQTIVRVVYHSDSDTVNTPAQVLGDDSLLLKYLNTHLAAVITVTKPPPSSNEKNNRDQSGVARVGSNEDTSGGSSAPSPTLFVSLVDTVAGRILHRVKHTTASGPTHMTISENWVVYSYWNTKAHRTELSTLSLYEGIIDRFGLNPFKVPEQEDTFNSLTAPAPVVMQRTYIFPKAITSLSNTVTARGITSKNLLIALETGQV 901          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: H3GWY1_PHYRM (ER membrane protein complex subunit 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWY1_PHYRM)

HSP 1 Score: 185 bits (470), Expect = 8.330e-49
Identity = 110/326 (33.74%), Postives = 174/326 (53.37%), Query Frame = 1
Query:   43 LHATRPKSALGFHPEVAIIALGEESTFVSWRDAITGAETMSEEFGYHVASA----------LPLDVRDAEERSVLMLVDGEGGVYAAPSSPESVTGLSGLVPSLYHHNFSQEAGLQSFSVVKREAAGDAVLLGSAPVASMPVPNRSRVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLA-EGEGDGGMAGKGQEMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            L  TR   ALG   E+ +++    ST + W D   G +  ++  G    ++          L  D      R+V ++ +    V   P   E+   +   +   Y + F + A +    V++ E  G      +    S+ +P   +V+A ++      V +     GDDSLLIKY+NP L  +AT+A EG+ D         + V+++DSV+GRI+HR+ H  AA PV MV SE+W+VYSYW+   +RTE+ +LSL++G +  + L+P+ RP W  + SSF+S+ P VLQKSF++P  +T+LG+ +T  GIT + ILVG   GQ+
Sbjct:  549 LFVTRDHPALGSGAELLLVS---NSTELVWLDGDDGHQLDADSAGTATGASWVVVLPKRKHLATDEEPTARRTVAIISEDSLKVSLYPK--ETADYVHPELEHFYFYRFDESAKVLRGYVIENEGDGKTADYRAREAWSVVLPREQQVIAASHHHDHSVVDSAVTITGDDSLLIKYLNPNLFGLATIATEGDNDATSV-----LHVSLIDSVTGRIIHRVRHSHAAGPVRMVQSENWLVYSYWNTKEKRTELVSLSLFDGAVGMHSLNPWKRPSWTSTRSSFDSKAPFVLQKSFIYPTKITSLGVTVTAHGITPQSILVGMETGQI 864          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: A0A7S2SXS9_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXS9_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.140e-48
Identity = 122/337 (36.20%), Postives = 182/337 (54.01%), Query Frame = 1
Query:   31 AKILLHATRPKSALGFHPEVAIIALGEESTFVSWRDAITGAETMSEEFGYHVASALPLDVRDAEERSVLMLVDGEGGVYAAPS-----SPESVTGLSGLVPSLYHHNFSQEAGLQSFSVVKREAAGDAVLL--GSAPVASMPVP------NRSRVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLAEGEGDGGMAGKGQEMTVTVLDSVSGRILHRISHKGA-----AEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            A + L A+R KS    HPEV  ++     T V+  D  TG    S      +AS +PL   D   R+V ++V G G   A  +     SP +   +  L    + H   + AG+    +  R    D++ L  GSA  +S+ V       +   + A AY    D V +PA  LGDDSLL+KY+NP L  + + +  +           + V+++D+V+GR+LHR+SH  A     + PV  VVSE+WV+Y YW+  ++RTEI  +SL+EGMIDKY L+PF  P    +FSSF+S  P+V+Q++FVFP  ++AL   +T +GI+ K++LV    GQV
Sbjct:  595 AVVKLVASRSKSVANKHPEVVAVSTAAGVTQVTRVDGATGKVQTSTVLPIAMASMVPLPATDNSFRAVTLVV-GHGPDQAVETCLLHDSPSARDAIQNLAGKTFFHLVDRGAGI----IESRVLLADSLHLIDGSACYSSLEVARTVLAEDHETIAAVAYPTPGDIVNSPAQILGDDSLLLKYLNPNLAVVVSHSSSD----FTLSNSTVYVSLVDTVAGRVLHRVSHPNARPVPSSSPV--VVSENWVMYYYWNTKAKRTEIGVMSLFEGMIDKYHLNPFRVPNQDGNFSSFKSPPPVVMQRTFVFPRAISALQTTVTAQGISTKNLLVAMETGQV 920          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: A0A7R9YCV5_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCV5_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.050e-47
Identity = 109/320 (34.06%), Postives = 163/320 (50.94%), Query Frame = 1
Query:   82 PEVAIIALGEESTFVSWRDAITGAETMSEEFGYHVASALPLDVRDAEE-RSVLMLVDGEGGVYAAPSSPESVTGLSGLVPSLYHHNFSQEAGLQSFSVVKREAAGDAVLLGSAPVASMPVPNRSRVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMAT-----LAEGEGDGGMAGKGQ------------EMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            PE+ ++      T +   DA +GA+   +     V   L + + D +  R VL L+ G          P+S    + L  S+Y H+   EAG     V++  +           + S P P   RV A AY D    +++  H LGD SLLIKY+NP L  +AT     +A G  DGG    G              + +  +D VS ++L+R+ H  AAEP H+ + E+W++YSYW+   +RTE+  +SL+EG + + GL+PFN+PE    FS+F    P+ +Q+SF FPH +TALGI  T  GIT +  ++G   GQV
Sbjct:  584 PEILLLRPEANQTTLLRVDATSGADVQEDVLAMRVDKVLNMGISDPDSYRRVLALITGIDAHPQCVLYPDSAKARALLGHSIYFHHVDSEAGTLRSFVLELPSNDSIPSATETGIISWP-PESERVAAVAYGDA-SAIKSATHELGDGSLLIKYLNPNLAVVATVDQNAIAGGLADGGSTTSGDASAGTSIAEPKPSLFINAVDVVSAKVLYRVGHVYAAEPFHVTLHENWIIYSYWNYRVRRTEVGAISLFEGHVARNGLNPFNKPERSSIFSAFGDEPPVAMQRSFSFPHGITALGITKTAAGITPRACIIGMESGQV 901          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: W4H6I8_9STRA (ER membrane protein complex subunit 1 n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6I8_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.540e-46
Identity = 114/327 (34.86%), Postives = 174/327 (53.21%), Query Frame = 1
Query:   43 LHATRPKSALGFHPEVAIIALGEESTFVSWRDAITGAET-----MSEEFGYHVASALP------LDVRDAEERSVLMLVDGEGGVYAAPSSPESVTGLSGLVPSLYHHNFS-QEAGLQSFSVVKREAAGDAVLLGSAPVASMPVPNRSRVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLAEGEGDGGMAGKGQEMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            L  TR   A G   E+ ++    +S  + W DA  G+        S   G      LP      LD      R V +L D    V   P+  +    +   V S Y H ++  +   Q F +    AA         PV S+ +P   R+VA++       + +    LGDDSLL+KY+NP L  +AT+ +           + + V+++D VSGRI+HR+ H+ AAEPVH+V SE+W+VYSYW+  S+RTE+ +L+L EG +   GL+P+ +P W  + SSFE ++P+VLQK+FV+P  ++ALG+ +T +GIT + ILV  + GQ+
Sbjct:  541 LLVTRDHPAFGAGAELLVVT--PQSKQLLWLDAGDGSVVHEDVPASSSSGVKWVVLLPKLKHVELDAT-VPRRVVGVLDDATNNVDLFPADED----VRDHVQSFYVHRYNPHDHAFQGFVLASTTAAS--------PVWSVALPANERIVARSVQPEHRAIDSSVTVLGDDSLLLKYLNPHLFGVATIDDH----------RVLHVSLIDGVSGRIVHRVKHRDAAEPVHLVQSENWLVYSYWNTKSKRTELVSLTLVEGGVPANGLNPWKQPRWASAKSSFEPKLPVVLQKTFVYPASISALGVTVTNQGITPQYILVAQSNGQI 842          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: A0A6A3JFT2_9STRA (ER membrane protein complex subunit 1 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JFT2_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.100e-46
Identity = 110/327 (33.64%), Postives = 174/327 (53.21%), Query Frame = 1
Query:   43 LHATRPKSALGFHPEVAIIALGEESTFVSWRDAITGAETMSEEFGYHVASA----------LPLDVRDAEERSVLMLVDGEGGVYAAPSSPESVTGLSGLVPSLYHHNFSQEAGLQSFSVVKREAAGDAVLLGSAPVASMPVPNRSRVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLAE--GEGDGGMAGKGQEMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            L+ TR   ALG   E+ +++    ST + W D   G +  +   G    ++          L  D      R+V ++ +    V   P   E+       +   Y + + + A +    V++ E   + V   ++ V S+ +P   +V+A ++      V +     GDDSLLIKY+NP L  +AT+A    EGD         + V+++DSVSGRI+HR  H  AA PV MV SE+W+VYS W++  +RTE+ +LSL++G +  + L+P+ RP W  S SSF+S+ P VLQKSF++P  +T+LG+ +T  GIT + +LVG   GQ+
Sbjct:  553 LYVTRDHPALGSGAELLLVS---NSTELIWLDGDDGHKLDALSAGAATGASWVVVLPKRKHLTTDEEPTARRTVAVISEESLKVSLYPE--ETADFAHPELEHFYFYRYDEIAKVLRGYVIENEGDAEKVDYRASEVWSVVLPRDEQVIATSHHHDHSVVDSAVTITGDDSLLIKYLNPNLFGLATIATEPAEGDNEPT---SVLHVSLIDSVSGRIIHRARHSHAAGPVRMVQSENWLVYSVWNSKEKRTEMVSLSLFDGAVGMHSLNPWKRPSWTSSRSSFDSKAPFVLQKSFIYPTKITSLGVTVTAHGITPQSVLVGMETGQI 871          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: A0A6A3JSJ7_9STRA (ER membrane protein complex subunit 1 n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JSJ7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.450e-46
Identity = 110/327 (33.64%), Postives = 174/327 (53.21%), Query Frame = 1
Query:   43 LHATRPKSALGFHPEVAIIALGEESTFVSWRDAITGAETMSEEFGYHVASA----------LPLDVRDAEERSVLMLVDGEGGVYAAPSSPESVTGLSGLVPSLYHHNFSQEAGLQSFSVVKREAAGDAVLLGSAPVASMPVPNRSRVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLAE--GEGDGGMAGKGQEMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            L+ TR   ALG   E+ +++    ST + W D   G +  +   G    ++          L  D      R+V ++ +    V   P   E+       +   Y + + + A +    V++ E   + V   ++ V S+ +P   +V+A ++      V +     GDDSLLIKY+NP L  +AT+A    EGD         + V+++DSVSGRI+HR  H  AA PV MV SE+W+VYS W++  +RTE+ +LSL++G +  + L+P+ RP W  S SSF+S+ P VLQKSF++P  +T+LG+ +T  GIT + +LVG   GQ+
Sbjct:  636 LYVTRDHPALGSGAELLLVS---NSTELIWLDGDDGHKLDALSAGAATGASWVVVLPKRKHLTTDEEPTARRTVAVISEESLKVSLYPE--ETADFAHPELEHFYFYRYDEIAKVLRGYVIENEGDAEKVDYRASEVWSVVLPRDEQVIATSHHHDHSVVDSAVTITGDDSLLIKYLNPNLFGLATIATEPAEGDNEPT---SVLHVSLIDSVSGRIIHRARHSHAAGPVRMVQSENWLVYSVWNSKEKRTEMVSLSLFDGAVGMHSLNPWKRPSWTSSRSSFDSKAPFVLQKSFIYPTKITSLGVTVTAHGITPQSVLVGMETGQI 954          
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Match: A0A024UWQ1_9STRA (ER membrane protein complex subunit 1 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWQ1_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.360e-45
Identity = 99/255 (38.82%), Postives = 149/255 (58.43%), Query Frame = 1
Query:  226 RSVLMLVDGEGGVYAAPSSPESVTGLSGLVPSLYHHNFSQ-EAGLQSFSVVKREAAGDAVLLGSAPVASMPVPNRSRVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLAEGEGDGGMAGKGQEMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAASQRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFPHPVTALGIILTQRGITAKDILVGTALGQV 987
            R V +L     GV   P+       +S LV S Y H ++  +   Q F +               PV S+ +P   R+VA++       + +    LGDDSLL+KY+NP L  +ATL     D G+      + V+++D VSGR++HR+ H+ AAEPVH+V SE+WVVYS+WS  S+RTE+ +L+L EG +   GL+P+ +P W    SSFE ++P+VLQKSF++P  ++ALG+ +T +GIT + I+V    GQ+
Sbjct:  615 RVVGVLDQDSNGVELIPAEEN----VSDLVRSFYVHRYNAADHAFQGFVLSSTSTVS--------PVWSIAIPANERIVARSAPPDHLAIDSAVTILGDDSLLLKYLNPHLFGIATL----DDQGV------LHVSLIDGVSGRVVHRVKHRDAAEPVHVVQSENWVVYSFWSTKSKRTELVSLTLVEGGVPATGLNPWQQPSWASEKSSFEPKLPVVLQKSFIYPASISALGVTVTNQGITPQYIVVAQTNGQL 847          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12449.1535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ92_ECTSI2.540e-13667.44ER membrane protein complex subunit 1 n=2 Tax=Ecto... [more]
A0A835YVX9_9STRA3.400e-5736.55ER membrane protein complex subunit 1 n=1 Tax=Trib... [more]
A0A7S2DLI3_9STRA1.330e-5133.14ER membrane protein complex subunit 1 n=1 Tax=Dict... [more]
H3GWY1_PHYRM8.330e-4933.74ER membrane protein complex subunit 1 n=1 Tax=Phyt... [more]
A0A7S2SXS9_9STRA3.140e-4836.20ER membrane protein complex subunit 1 n=1 Tax=Rhiz... [more]
A0A7R9YCV5_9STRA1.050e-4734.06ER membrane protein complex subunit 1 n=1 Tax=Ping... [more]
W4H6I8_9STRA1.540e-4634.86ER membrane protein complex subunit 1 n=13 Tax=Aph... [more]
A0A6A3JFT2_9STRA4.100e-4633.64ER membrane protein complex subunit 1 n=5 Tax=Phyt... [more]
A0A6A3JSJ7_9STRA4.450e-4633.64ER membrane protein complex subunit 1 n=2 Tax=Phyt... [more]
A0A024UWQ1_9STRA1.360e-4538.82ER membrane protein complex subunit 1 n=2 Tax=Apha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12449contigH-paniculata_contig12449:3091..7284 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score422.9
Seed ortholog evalue1.4e-115
Seed eggNOG ortholog2880.D7FJ92
KEGG rclassRC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500
KEGG koko:K00128
KEGG ReactionR00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146
KEGG Pathwayko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130
KEGG ModuleM00135
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein folding in endoplasmic reticulum
EggNOG OGsKOG2103@1,KOG2103@2759
Ec32 ortholog descriptionDomain of unknown function DUF1620
Ec32 orthologEc-12_008390.1
EC1.2.1.3
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size1005
Cds size1005
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12449.1535.1prot_H-paniculata_contig12449.1535.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12449 3091..7284 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928964.2262166-CDS-H-paniculata_contig12449:3090..33411622928964.2262166-CDS-H-paniculata_contig12449:3090..3341Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 3091..3341 +
1691480684.196711-CDS-H-paniculata_contig12449:3090..33411691480684.196711-CDS-H-paniculata_contig12449:3090..3341Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 3091..3341 +
1622928964.2406235-CDS-H-paniculata_contig12449:3851..42241622928964.2406235-CDS-H-paniculata_contig12449:3851..4224Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 3852..4224 +
1691480684.2115765-CDS-H-paniculata_contig12449:3851..42241691480684.2115765-CDS-H-paniculata_contig12449:3851..4224Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 3852..4224 +
1622928964.2522821-CDS-H-paniculata_contig12449:4857..49111622928964.2522821-CDS-H-paniculata_contig12449:4857..4911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 4858..4911 +
1691480684.2195494-CDS-H-paniculata_contig12449:4857..49111691480684.2195494-CDS-H-paniculata_contig12449:4857..4911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 4858..4911 +
1622928964.2787163-CDS-H-paniculata_contig12449:5819..59661622928964.2787163-CDS-H-paniculata_contig12449:5819..5966Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 5820..5966 +
1691480684.227566-CDS-H-paniculata_contig12449:5819..59661691480684.227566-CDS-H-paniculata_contig12449:5819..5966Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 5820..5966 +
1622928964.3156674-CDS-H-paniculata_contig12449:7104..72841622928964.3156674-CDS-H-paniculata_contig12449:7104..7284Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 7105..7284 +
1691480684.23639-CDS-H-paniculata_contig12449:7104..72841691480684.23639-CDS-H-paniculata_contig12449:7104..7284Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12449 7105..7284 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12449.1535.1

>prot_H-paniculata_contig12449.1535.1 ID=prot_H-paniculata_contig12449.1535.1|Name=mRNA_H-paniculata_contig12449.1535.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=335bp
SLVLPSWANNAKILLHATRPKSALGFHPEVAIIALGEESTFVSWRDAITG
AETMSEEFGYHVASALPLDVRDAEERSVLMLVDGEGGVYAAPSSPESVTG
LSGLVPSLYHHNFSQEAGLQSFSVVKREAAGDAVLLGSAPVASMPVPNRS
RVVAKAYADRRDEVQTPAHTLGDDSLLIKYINPRLLAMATLAEGEGDGGM
AGKGQEMTVTVLDSVSGRILHRISHKGAAEPVHMVVSESWVVYSYWSAAS
QRTEISTLSLYEGMIDKYGLSPFNRPEWKESFSSFESRVPIVLQKSFVFP
HPVTALGIILTQRGITAKDILVGTALGQVRGGYM*
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mRNA from alignment at H-paniculata_contig12449:3091..7284+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12449.1535.1 ID=mRNA_H-paniculata_contig12449.1535.1|Name=mRNA_H-paniculata_contig12449.1535.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4194bp|location=Sequence derived from alignment at H-paniculata_contig12449:3091..7284+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTCTTGTGCTCCCGTCCTGGGCGAACAACGCTAAGATTCTCCTGCACGC GACGAGGCCTAAGAGCGCTCTAGGGTTTCATCCGGAAGTGGCGATCATAG CGCTTGGAGAAGAGTCGACCTTTGTGTCTTGGCGGGACGCAATCACTGGG GCGGAGACGATGAGTGAGGAGTTCGGGTATCACGTGGCATCAGCTTTGCC CTTGGACGTACGTGACGCCGAGGAACGTTCGGTGCTCATGCTGGTTGACG GGTAAGAGAGCATGTCTTGAGGAAAGAGAGGAGGGGAAGTTGAGGGGCGA GGACTTTGAATCCCCCGCCCCGCCCCTCCCCCATTTCTGGTCACCCCAGT TTTAGTCAAGCAGGCGTTTTATGCACATCCATCGCAGACGGAGGGGGGCT TCTTGCTCTATTTTTCTGCTCTTTTTGAGTGCAACCAACGTGTTTTATTT TAGTATAATACTGCCGCGTCCTTTTTAGTCCAAATACCCGCGTATTTGGT TCGGTCATATATCCTCCTCCTCCTCCTCCTCCCTTACGTTCTTATTTTGA TGAAAGTTTTGTGATTGCCAGTCATTAGTACACGAGTAGAGACTATTTAG TACAACCCACGTACCGAAGTAGCGGGATATTGTGTTAGACTGTTTCAGCT GGCGAGTGCCGAAGAAAGCAGTCAGCCCTTTCCCGTTCGAAGAGACATCA TCCATCGTGGCGTACCCAACCTCAAGTCCCCTCCCCCCCCCCCCCTCTCT CCCGATTTCAGCGAAGGAGGTGTTTACGCCGCACCCAGCTCCCCGGAATC CGTCACTGGACTTTCCGGACTTGTTCCCAGTTTGTACCATCATAACTTCT CGCAGGAAGCGGGTCTGCAAAGTTTCTCTGTGGTGAAGAGGGAAGCAGCC GGTGACGCTGTATTGTTGGGTTCGGCCCCCGTGGCGTCTATGCCTGTACC GAATCGATCGCGGGTCGTGGCGAAGGCGTACGCAGACCGGAGAGACGAGG TGCAGACGCCGGCGCATACTCTGGGGGATGACTCTCTGCTGATCAAGTAT ATTAATCCTAGGTTGCTGGCGATGGCTACCCTCGCGGAGGGTGAGGGAGA CGGCGGGATGGCGGGGAAGGGACAAGAGATGACGGTAAGAGTGTACACGT ACTGTACTTGGTCGTATTCTAGGATCTTGAGTCCCGGTAGTAGCGACGGT TCGCAAGGCTGTGTGGTGTTTTGAATGATAGATCTGTGCGTGTGTGTGCG CGTAGTATGGCTATTGTAGTGAGCTCGTCTGAGCGTTGCGTCATGGTTGA AAAGGTGAAAGATGACACTTCTTGCCGAGAGATGCTTGTGTTATCATTGG ATAGGCAGGCGCCGGCGGATATATAGTCGAGGCAGCGTGGGGGTCTTCGT TGTCTTCATATCACTGAGCTTGAAGAATCTGATCGCTCGCTCGGCTTGTT TCAATAAATGAATGTGCTGATGAATATTGAGAGAGCGCTGTGAACAGCCG GTCTGTGCAGAACCATGATGCCAGCCCCCTCCCCGTCTGTGCGGTGAGGG CTTTGTGTGCTAGATCGGCTATCTCAGCAGCTCAGCAGCTTAGCGGCCTT GGCTCCCTATTCCTGTGATGATTTCATGCTATTACCCTTTGGTATTTTGA GCTGGAGATCTCCTTAGAGGTGGATGCGTGAATGGTTTGTGGGAAATAAT GTGATTCGGTATAAGTACCACCGTCAATTCCAATAACTTTCTGTTTTTTT TTTTGTTTTTTGTTCAGGTCACCGTGCTGGACTCTGTGTCGGGGCGTATT TTACACCGCATCTCCCACAAGGTATATATCTACGTATCTATGCACCTATG TATCTGTGTCTCTATGTAGGGATGGATTTATGTGTCAGTGAATTTAGATA ATCGAGTTAGGTGAGCAGGTACGTAGATAAATAGGTGCGTAGGTAGGTCG GCACGCAGGCACGCGTCGTTCTGGAGTCTTCTTCTTGGGGAATATGTTCC TATGCCTTCATCCATTTGTGTTTTTTTGTGATTATGGTGCTGCTGGTGGT GTGTCGATCGGAATAGTTTTTTATCCTCTGTCTTTTGGTGACGATATTCA TGACAATTTTCACCTACGTCCTTTGTTCAAGAATCTCATCGAGGTGGAGC CGTGGCCTATTTCCCACGCGTCCACCAGTTTTGGTAAAATCTTGGTGATC CGCGTGCAGTTGTTTTGAGGCAAAATAGATGCTGAAAATGGTCTCTGTTA ACCGATAGTACTCAGCCCAATGTAAAGTATATATGTATATATTATGTATC GCTGATTCCATAAGCTATCTTTCAACAATCGTCTTCTAAAGGTTGTTCCG AAATTAATATCGAGTGGTGTGTGGTCTGTCGGGTTTTTTTTTTTCCGGGA AACTTGATGCCTTCTGAGAGACGTGTCGGAGAAAATGGACGGTAATTGTA TACAGCCATGTTCCACACCATTGTTTTGTGTGTGTGTGTGTGTTTCTTGT ACGTGGGTCATGAGCATATTTTACGACATGCTGATGAAGTATTTTTTTGA TAAGGACAATTTGGTACATCCTGTTATTTTCAAATAGAGAAGTTGATCAA TACGCTTGGCAGCAAAAAGACCGCAGTCGGCCCCATTATTCAGTTGTATC ACCGGTATTTCATGACACAGCCCTGCTTCTCTTATTGTTGACGTTTTATC TCCACCTTTCCTTTTATGTGTTGGAGCAGGGGGCAGCAGAACCGGTGCAC ATGGTGGTATCCGAGTCGTGGGTGGTTTACAGTTACTGGAGCGCGGCGTC TCAGAGGACCGAGATCTCCACGCTAAGTCTGTACGAGGGCATGATCGACA AGTACGGCTTGAGCCCATTTAACCGAGTGAGTGTTTATATACTTGCTGCA AGATTGCTTGTCGCGTGCGTGCTTGAGCCCGTCCAACCGAGTGAACACAT GTCCATTTCAACTATACTTGTCGCGTGAATTCGATGCTCCCACGGCGAAT GGTTGTGTTCAACGAGTCTGGTCTTGAGTTGGGGTTCCTGGATGTATTAC GTAAATGCATGTAGTAGTGTGGAGCACACGGAGCTTGGTCTGTACGGTGG GAGTTAAGCTTCCTCAGTGGTAAAGTCGTATAGGTAATGATTGCAAAGGT ATTCCTGTTAGGGAGCAAGAATTACATCAGATGAGGGCTTAGGGAACCAG GGTTGAGGAACCCCAGGGCTGTCGGGAACGAGTTCTCCGTATGCTGATGG TTGTCTCGTTATTCGCTAAATGAATGATTGAAGTGTTCCCCTCTATATAT TTTAAAGTTTTTTCGCTATGTCTTGGCTCATTATGCGCCTAAAATAATCT AGGGGTCAGCGGTGAAAAACTGTGACTCGGGCCGATTCGTTGTTGATGTG TCGGAGGGAAAAAATCCAGAGCACACGCTTTTCTGTATCCCTTTCCTGTG CTAGCATATTTCATGGGGATACGAGTCAGCATAATTCGGATTAACGTTCG ATAAAACGACATTTGTAAGTTTATTGAAGTTATCTTGTTCTTTATCGGCT GTTATAGTAGGTAGGTACTATGGTGACATCCCCTGTTTATTTTTGCCACC ACGAGAGGGTCACCTTGAGCAGGAGAATTTTTCAGACTGACGGTAGAGGG TTAGAGGTACAGATACAATGGTGAGAATCGCCGCCGACGATCAGGTAGAC ACCGTTGTAGGAGAGCGGTATCGTTGAGGTAGCGATTGTATGATGACCCA CAAGACACCCTTCCCGCTGTCGCACTGTTTGGGCGGAGGTTTTTGGACGC GTCGCATTCGATAAATGGTCTCGACGTGAAAATGTGATGAAAGTATTTCG CATGGGTACATTTCACACTAGTGTCGCGAAATTTCAAATTTCAATTGCCT TGTAATTTTGACTGTAAATATCAATTTTGGAAGGTGTGCAACCGAAAGAC GAAAGTGGTTACTGGATAGAGAGAGCGCTCTAAAAATTACTTTTTTTTTT CTTTTTTTTCTCAGCCTGAGTGGAAAGAGTCATTTTCCTCGTTCGAGTCA AGAGTGCCCATCGTGTTGCAGAAGAGCTTCGTCTTCCCGCACCCCGTGAC CGCACTGGGGATCATCCTCACACAGCGCGGCATCACTGCTAAGGACATTT TGGTGGGGACGGCTCTAGGGCAGGTGCGTGGTGGTTATATGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig12449:3091..7284+

>mRNA_H-paniculata_contig12449.1535.1 ID=mRNA_H-paniculata_contig12449.1535.1|Name=mRNA_H-paniculata_contig12449.1535.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2010bp|location=Sequence derived from alignment at H-paniculata_contig12449:3091..7284+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTCTTGTGCTCCCGTCCTGGGCGAACAACGCTAAGATTCTCCTGCACGC
GACGAGGCCTAAGAGCGCTCTAGGGTTTCATCCGGAAGTGGCGATCATAG
CGCTTGGAGAAGAGTCGACCTTTGTGTCTTGGCGGGACGCAATCACTGGG
GCGGAGACGATGAGTGAGGAGTTCGGGTATCACGTGGCATCAGCTTTGCC
CTTGGACGTACGTGACGCCGAGGAACGTTCGGTGCTCATGCTGGTTGACG
GTCTCTTGTGCTCCCGTCCTGGGCGAACAACGCTAAGATTCTCCTGCACG
CGACGAGGCCTAAGAGCGCTCTAGGGTTTCATCCGGAAGTGGCGATCATA
GCGCTTGGAGAAGAGTCGACCTTTGTGTCTTGGCGGGACGCAATCACTGG
GGCGGAGACGATGAGTGAGGAGTTCGGGTATCACGTGGCATCAGCTTTGC
CCTTGGACGTACGTGACGCCGAGGAACGTTCGGTGCTCATGCTGGTTGAC
GGCGAAGGAGGTGTTTACGCCGCACCCAGCTCCCCGGAATCCGTCACTGG
ACTTTCCGGACTTGTTCCCAGTTTGTACCATCATAACTTCTCGCAGGAAG
CGGGTCTGCAAAGTTTCTCTGTGGTGAAGAGGGAAGCAGCCGGTGACGCT
GTATTGTTGGGTTCGGCCCCCGTGGCGTCTATGCCTGTACCGAATCGATC
GCGGGTCGTGGCGAAGGCGTACGCAGACCGGAGAGACGAGGTGCAGACGC
CGGCGCATACTCTGGGGGATGACTCTCTGCTGATCAAGTATATTAATCCT
AGGTTGCTGGCGATGGCTACCCTCGCGGAGGGTGAGGGAGACGGCGGGAT
GGCGGGGAAGGGACAAGAGATGACGCGAAGGAGGTGTTTACGCCGCACCC
AGCTCCCCGGAATCCGTCACTGGACTTTCCGGACTTGTTCCCAGTTTGTA
CCATCATAACTTCTCGCAGGAAGCGGGTCTGCAAAGTTTCTCTGTGGTGA
AGAGGGAAGCAGCCGGTGACGCTGTATTGTTGGGTTCGGCCCCCGTGGCG
TCTATGCCTGTACCGAATCGATCGCGGGTCGTGGCGAAGGCGTACGCAGA
CCGGAGAGACGAGGTGCAGACGCCGGCGCATACTCTGGGGGATGACTCTC
TGCTGATCAAGTATATTAATCCTAGGTTGCTGGCGATGGCTACCCTCGCG
GAGGGTGAGGGAGACGGCGGGATGGCGGGGAAGGGACAAGAGATGACGGT
CACCGTGCTGGACTCTGTGTCGGGGCGTATTTTACACCGCATCTCCCACA
AGGTCACCGTGCTGGACTCTGTGTCGGGGCGTATTTTACACCGCATCTCC
CACAAGGGGGCAGCAGAACCGGTGCACATGGTGGTATCCGAGTCGTGGGT
GGTTTACAGTTACTGGAGCGCGGCGTCTCAGAGGACCGAGATCTCCACGC
TAAGTCTGTACGAGGGCATGATCGACAAGTACGGCTTGAGCCCATTTAAC
CGAGGGGCAGCAGAACCGGTGCACATGGTGGTATCCGAGTCGTGGGTGGT
TTACAGTTACTGGAGCGCGGCGTCTCAGAGGACCGAGATCTCCACGCTAA
GTCTGTACGAGGGCATGATCGACAAGTACGGCTTGAGCCCATTTAACCGA
CCTGAGTGGAAAGAGTCATTTTCCTCGTTCGAGTCAAGAGTGCCCATCGT
GTTGCAGAAGAGCTTCGTCTTCCCGCACCCCGTGACCGCACTGGGGATCA
TCCTCACACAGCGCGGCATCACTGCTAAGGACATTTTGGTGGGGACGGCT
CTAGGGCAGGTGCGTGGTGGTTATATGTGACCTGAGTGGAAAGAGTCATT
TTCCTCGTTCGAGTCAAGAGTGCCCATCGTGTTGCAGAAGAGCTTCGTCT
TCCCGCACCCCGTGACCGCACTGGGGATCATCCTCACACAGCGCGGCATC
ACTGCTAAGGACATTTTGGTGGGGACGGCTCTAGGGCAGGTGCGTGGTGG
TTATATGTGA
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