mRNA_H-paniculata_contig12433.1527.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A6H5JQW7_9PHAE (PAP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQW7_9PHAE) HSP 1 Score: 287 bits (734), Expect = 4.840e-90 Identity = 140/178 (78.65%), Postives = 163/178 (91.57%), Query Frame = 1 Query: 1 QAEMADCGMGCGENKRAKMMEAMEALMSTREGNLVLADDVGDGLISKLEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 Q EMADCGMGCGE+KR +M+EAMEAL++T EGNLVL DD+G GLI L GEWRLL+TSSN+ME+NQGLTGLANTIPNA+F GLRQILH DGMVFDAEYEEEL G+DSE PL+ITVTSDWEVK+TSSL+TG+S+VA++V+PKQIKYGFITVR+ERWKTLRAMMLLDIAYLD ++R +R Sbjct: 551 QREMADCGMGCGEDKRTEMLEAMEALLATEEGNLVLGDDLGTGLIDTLAGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDDSE-PLIITVTSDWEVKQTSSLVTGKSSVAIAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDANLRIMR 727
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A7S2Y4G3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4G3_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.570e-32 Identity = 71/184 (38.59%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 13 ADCGMGCGENKRAKMMEAMEALMSTREGNLVLADDVGDG----------LISKLEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 A+CGM ++ ++ E +AL+ + NLV A + + L LEG+W L +TSS +ME+NQG +GLA TIP A F+G++Q L + DA Y E L + ++PL + V++ WE++ + S++TG+ ++ VSP++I+Y F+ RA+RWKT+RA LLD+ YLD D R ++ Sbjct: 81 AECGMNTPPAEQKEISEVAKALLGS-PSNLVQAAGLTEPGEVDVAVQTILGPALEGKWELKYTSSWTMEYNQGFSGLAKTIPGASFAGVQQELMNFSGIQDASYLETLLI---RDKPLEVQVSATWELQESKSVMTGDKIFSLVVSPEEIRYSFVKYRADRWKTMRAWNLLDLVYLDEDTRIMK 260
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A7S0AVI8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AVI8_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.990e-30 Identity = 61/149 (40.94%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 88 REGNLVLADDVGDGLISKLEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 + NLV+ GD L G+W L+FT+S++M+FNQGL+GL + PN +F G+ Q L D EY+E + V + +TVT DW++K T +L TGE T +++ P ++KYG + +A+ WK L + LLDI YLD+D+R +R Sbjct: 2 QRSNLVITKG-GDIQPEDLTGDWDLIFTTSSTMKFNQGLSGLGGSFPNGKFGGVVQKLQNSKWTSDIEYKERIEVPAGAS--FDVTVTGDWKLKGTVNLFTGEPTTVMAIEPDKVKYGPTSTKADHWKALGPLNLLDITYLDDDLRVMR 147
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A7S1UT46_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UT46_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.420e-30 Identity = 63/172 (36.63%), Postives = 104/172 (60.47%), Query Frame = 1 Query: 19 CGMGCGENKRAKMMEAMEALMSTREGNLVLADDVGDGLISKLEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 CG+ E++R+ +++ + A++ N+V D GD I ++GEW L+FT+S ++ FN+GL+GL PN +F GLRQ L ++ DAEY E + + N + + V DW + + ++ +TGE + ++V P +++YG + AE WK+L M LDI YLD D+R +R Sbjct: 48 CGLDSTEDERSLVLDTV-AVLEKEPSNIVAQRD-GDVRIEDVKGEWDLIFTTSATLLFNKGLSGLVRNFPNGKFGGLRQSLKATKVLTDAEYIERIEM-NPAVASFDVRVIGDWYIDKQTNFLTGEPSTILTVDPVRVEYGVTSQTAEYWKSLGPMNKLDITYLDKDLRIMR 216
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A7S0C871_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C871_9STRA) HSP 1 Score: 117 bits (294), Expect = 5.260e-29 Identity = 59/172 (34.30%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 19 CGMGCGENKRAKMMEAMEALMSTREGNLVLADDVGDGLISKLEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 CG+ E+ + +++ L +T + D + L G+W L++TSS M+FN+GLTGL + PN +F GL Q + D +Y+E + V D + +V DW +K + SL++G T+ +++ P +KYG RA+ WK++R M +LD+AYLD+D R +R Sbjct: 112 CGLDADEDAQLRILNIASVLETTSTNKV--NDSTMSIIPQDLTGDWDLIYTSSGMMKFNKGLTGLGGSFPNGQFGGLVQTFVATKYIMDVDYKERILVNPDIQS-FDASVNGDWNLKSSVSLLSGLPTILIAIEPDMVKYGPTATRADHWKSVRCMNVLDLAYLDDDFRIMR 280
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A7S1CXT1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXT1_CYCTE) HSP 1 Score: 116 bits (290), Expect = 8.630e-29 Identity = 61/178 (34.27%), Postives = 104/178 (58.43%), Query Frame = 1 Query: 7 EMADCGMGCGENKRAKMMEAMEALMSTREGNLVLADDVGDGLISK--LEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 E CG+ E + +++ A + +E + + G G + + L G+W LL+T+S++M+FN+GL+G+ + PN +F GL+Q L ++ D EY E + V N S + VT +W+++++ SL TG+ T S P Q+ YG +A+ WK+L + +LDI YLDN++R +R Sbjct: 66 ERLPCGLESTEEEDKQILRI--ATLLEKESSNRIQSSSGGGSVEQEDLNGKWELLYTTSSAMKFNKGLSGIGGSFPNGKFGGLQQTLISSRLISDVEYTERIDV-NPSAASFDVRVTGNWDLRQSVSLFTGQPTTVFSFEPGQVIYGPTKTKADHWKSLGPLTMLDITYLDNNLRIMR 240
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A1Z5JKP9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKP9_FISSO) HSP 1 Score: 119 bits (299), Expect = 2.790e-28 Identity = 57/176 (32.39%), Postives = 110/176 (62.50%), Query Frame = 1 Query: 7 EMADCGMGCGENKRAKMMEAMEALMSTREGNLVLADDVGDGLISKLEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 ++ CG+ + ++A +++ + L +E + ++ G + + G W LL++SS++M+FN+GL+GL + PN +F GL+ L + D EY E ++V ++ +TVT DW ++++ SL TGE ++ ++++P+++ YG + RA+ WK+L + +LD+AYLD D+R +R Sbjct: 372 DLLPCGLEASDREQANILKVINML--EQEPSNLIRSKQGAVDENDIAGNWELLYSSSSAMKFNKGLSGLGGSFPNGKFGGLKMRLDSSKYMSDVEYTERISVTPEAAS-FDVTVTGDWTLRQSISLFTGEPSITLAITPERVNYGPTSTRADHWKSLGPLNMLDVAYLDKDLRIMR 544
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: K0R3U2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3U2_THAOC) HSP 1 Score: 112 bits (281), Expect = 4.330e-27 Identity = 65/178 (36.52%), Postives = 109/178 (61.24%), Query Frame = 1 Query: 19 CGMGCGENKRAKMMEAMEALMSTREGNLVLADDV-GDGLISK--LEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELA---VGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 CG+ C E ++ +++E + L +V+ D V G+G I+K L GEW +++SS++M++N+GL+GLA + +F GLRQ L + D EY E+L +G D+E + +T DW+++ SL TG+ + +SV+P ++ YG + +A+ WK+L M LL + YLD D+R +R Sbjct: 109 CGLDCSELEQERVLEVVGELEREPYNQVVVPDGVTGEGAITKDQLTGEWEFIYSSSSTMKYNEGLSGLAGGL--TKFGGLRQTLSSTKFLSDVEYTEQLETKLLGADTE----VKITGDWDLRTEVSLFTGKLSNVMSVTPDRVIYGPRSDKADHWKSLGPMNLLLLTYLDEDLRIMR 280
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A7S4MXT9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXT9_9STRA) HSP 1 Score: 115 bits (289), Expect = 8.310e-27 Identity = 60/183 (32.79%), Postives = 106/183 (57.92%), Query Frame = 1 Query: 7 EMADCGMGCGENKRAKMMEAMEALMST-------REGNLVLADDVGDGLISKLEGEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 E CG+ + ++ ++ + L S R G L AD L GEW LL++SS++M+FN+GL+GL + PN +F GL+Q L + D EY E + + + + +TV DW ++ + ++ +G+ T ++V+P++++YGF + RA+ WK++ + +LDI YLD+D+R +R Sbjct: 434 ERLPCGLESTDREQTLVLNMVSVLESQPSNVVQQRGGKLEQAD---------LTGEWELLYSSSSAMKFNKGLSGLGGSFPNGKFGGLKQKLEASKFMSDVEYVERIDIP--AGQSFDVTVNGDWSLRGSINIFSGDPTTVLNVAPERVEYGFTSTRADHWKSVGPLNVLDITYLDDDLRIMR 605
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Match: A0A7S1CS29_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CS29_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.830e-26 Identity = 63/174 (36.21%), Postives = 104/174 (59.77%), Query Frame = 1 Query: 19 CGMGCGENKRAKMMEAMEALMSTREGNLVLADDVGDGLISKLE--GEWRLLFTSSNSMEFNQGLTGLANTIPNARFSGLRQILHVDGMVFDAEYEEELAVGNDSEEPLVITVTSDWEVKRTSSLITGESTVAVSVSPKQIKYGFITVRAERWKTLRAMMLLDIAYLDNDMRYVR 534 CG+ C E ++ +++E + L +V A + G G +SK E GEW LL++SS++M++N+GL+GLA + RF GL+Q + + D EY E++ VG + + +T DWE+K SL TG+ +SV+P + YG +A+ WK+L M +L ++Y+D D+R +R Sbjct: 342 CGLDCNELEQERVLEVVGELERETYNKVVAASNTGGGAVSKDELLGEWELLYSSSSTMKYNEGLSGLAGGL--TRFGGLKQKIIGTKYLSDVEYTEQV-VGKLGGKSYEVKITGDWEMKTELSLFTGKPANVMSVTPDNVVYGPRRDKADHWKSLGPMNMLLLSYIDEDLRIMR 512 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12433.1527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12433.1527.1 >prot_H-paniculata_contig12433.1527.1 ID=prot_H-paniculata_contig12433.1527.1|Name=mRNA_H-paniculata_contig12433.1527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp MADCGMGCGENKRAKMMEAMEALMSTREGNLVLADDVGDGLISKLEGEWRback to top mRNA from alignment at H-paniculata_contig12433:660..6305+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12433.1527.1 ID=mRNA_H-paniculata_contig12433.1527.1|Name=mRNA_H-paniculata_contig12433.1527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5646bp|location=Sequence derived from alignment at H-paniculata_contig12433:660..6305+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12433:660..6305+ >mRNA_H-paniculata_contig12433.1527.1 ID=mRNA_H-paniculata_contig12433.1527.1|Name=mRNA_H-paniculata_contig12433.1527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1050bp|location=Sequence derived from alignment at H-paniculata_contig12433:660..6305+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |