mRNA_H-paniculata_contig12386.1497.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A438FC14_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FC14_VITVI) HSP 1 Score: 190 bits (483), Expect = 5.610e-51 Identity = 121/353 (34.28%), Postives = 189/353 (53.54%), Query Frame = 1 Query: 4 EMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPEN---------PCMLKKI-VD--------GEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEKTSRMPDMLGASALSNGGK------PKT-LEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 EM+SM +NGVW+ + P+ + + K +++ K G + +YK RLVA+G Q EG+ Y E SP+ + S R+++A A D EL D + AFL +IDE +Y+ PEN C LK+ VD G ++++++V +IL + D ++ L +F +KDLG+A F +G + R+R L L Q Y+ + FG+ + G + ++ G K PK LE+K+M +F Y AVG+LM TRP IA V + R+ NPG H K ++++YL T ++ +TY + + ++DSDF CL++RRS SG + MLA GA+S Sbjct: 438 EMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKREHVDQCIYLKFSGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAP-----GDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVS 784
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A438E557_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E557_VITVI) HSP 1 Score: 186 bits (472), Expect = 1.780e-50 Identity = 114/335 (34.03%), Postives = 181/335 (54.03%), Query Frame = 1 Query: 4 EMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPENPCMLKKIVDGEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEKTSRMPDMLGASALSNGGK------PKT-LEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 EM+SM +NGVW+ + P+ + + K +++ K G + +YK RLVA+G Q EG+ Y E SP+ + S R+++A A D EL D + AFL +IDE +Y+ PEN E ++++++V +IL + D ++ L +F +KDLG+A F +G + R+R L L Q Y+ + FG+ + G + ++ G K PK LE+K+M +F Y VG+LM TRP IA V + R+ N G H K ++++YL T ++ +TY + + ++DSDF CL++RRS SG + MLA GA+S Sbjct: 237 EMKSMKDNGVWDLVELPEGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLWEQIIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAP-----GDTPVAKGDKFSLHQCPKNELEKKDMERFPYASVVGSLMYAQVCTRPDIAYIVGMLGRYLSNLGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVS 565
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A438I797_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438I797_VITVI) HSP 1 Score: 184 bits (468), Expect = 1.150e-48 Identity = 116/357 (32.49%), Postives = 184/357 (51.54%), Query Frame = 1 Query: 4 EMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPEN----------------------PCMLKKIVDGEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEKTSRMPDMLGASALSNGGK------PKT-LEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 EM+SM +NGVW+ + P+ + + K +++ K G + +YK RL+A+G Q EG+ Y E SP+ + S R+++A A D EL D + AFL +IDE +Y+ PEN C+ K G ++++++V +IL + D ++ L +F +KDLG+A F +G + R+R L L Q Y+ + FG+ + G + ++ G K PK LE+K+M +F Y AVG+LM RP IA V + R+ NPG H K ++++YL T ++ +TY + ++DSDF CL++RRS SG + MLA GA+S Sbjct: 547 EMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLIAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVITSFGFKENTVDQCIYLKF-SGSKFIILVLYVDDILLASSDVGLLHETKGFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAP-----GDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCMRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSN-HLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVS 896
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH) HSP 1 Score: 177 bits (449), Expect = 1.270e-47 Identity = 121/375 (32.27%), Postives = 186/375 (49.60%), Query Frame = 1 Query: 4 EMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPEN---------PCMLKK----------------------------IVD--------GEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEKTSRM--PDMLGASALSNGGKPKTLEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 E++SM N VWE + P+ V K +++ K +G +E+YK RLVA+G Q EG+ Y E SP+ S+R+++A A D EL D + AFL +++EE+++ PE C LKK IVD G + +I++V +IL + D ++ L +F++KD+G+A + +G + R+R L L Q Y++ + E FG+EK S P G LE K M + Y AVG+L+ T TRP I+ AV + R+ NPG H KA K+++YL T E+ +TY + + ++DSD G CL+T +S SG + +LA GA+S Sbjct: 39 ELKSMDQNKVWELVELPEGCKRVGCKWVFKTKRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKVSGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSPSIAPIQKGDKFSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKVMRYLQGTKEYMLTYR-RSDNLEVVGYSDSDLGGCLDTGKSTSGYLFLLAGGAVS 412
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A438FIW7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FIW7_VITVI) HSP 1 Score: 182 bits (461), Expect = 1.270e-47 Identity = 114/348 (32.76%), Postives = 185/348 (53.16%), Query Frame = 1 Query: 4 EMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPEN-----PCMLKKIVD--------GEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEKTSRMPDMLGASALSNGGK------PKT-LEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 E++SM +NGVW+ + P+ + + K +++ K G + +YK RL A+G Q EG+ Y E SP+ + S R+++A A D EL D + AFL +IDE +Y+ PEN L+ VD G ++++++V +IL + D ++ L +F +KDLGDA F +G + R+R L L Q Y+ + FG+ + G + ++ G K PK LE+K+M +F Y A+G++M TRP IA V + R+ N G H K ++++YL T ++ +TY + + ++DS+F CL++RRS SG + MLA GA+S Sbjct: 713 EIKSMKDNGVWDLVELPESVKPIGCKWIFKTKRDSKGNIVRYKARLAAKGFTQKEGIDYKETFSPVLSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLENTVDQCIYLKFSGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGDASFVLGIQIYRDRPRGILGLSQKAYIDKVLSRFGMSNCAP-----GDTLVAKGDKFSLHQCPKNELEKKDMERFPYASAIGSVMYAQFCTRPDIAYIVGMLGRYLSNLGMDHWKKAKRVMRYLQRTKDYMLTYH-RSSHLEIVGYSDSNFAGCLDSRRSTSGYIFMLAGGAVS 1054
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A438GQ37_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GQ37_VITVI) HSP 1 Score: 181 bits (459), Expect = 1.430e-47 Identity = 114/331 (34.44%), Postives = 174/331 (52.57%), Query Frame = 1 Query: 1 KEMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPENPCMLKKIVDGEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVE--KTSRMPDMLGASALSNGGKPKTLEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 +E +SM +N VWE + P + K +++ K +G VE+YK RL+A+G Q EG+ + E SP+ T S R+++A A D EL D + AFL DIDE +Y M K + ++++V +IL D +++ L F++KDLGDA F +G + R+R L L Q Y+ + + +G++ K P G N +LE +EM K Y AVG+LM TRP IA V + R+ NPG H +A ++++YL T E+ +TY + + ++DSDF C ++RRS SG + +LA GAIS Sbjct: 419 EEYKSMQDNKVWELVPLPVGTKPIGCKWIFKTKRDSNGNVERYKARLIAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIY--------MWSKYI------FLVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMNHWRAAKRVMRYLQRTKEYMLTYR-RLDQLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAIS 734
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A438EN28_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EN28_VITVI) HSP 1 Score: 177 bits (449), Expect = 6.390e-47 Identity = 114/348 (32.76%), Postives = 182/348 (52.30%), Query Frame = 1 Query: 4 EMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPEN---------PCMLKKIVDGEVEM---------VVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEKTS-RMPDMLGASALSNGGKPKT-LEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 EM SM N VW+ + P + + K +++ K G +E+YK RLVA+G Q EG+ YTE SP+ S+R++LA A D EL+ D + AFL +++EE+Y++ PE C LKK + G + ++++V +IL D ++ L F +KD+G+A + +G + R+R L L Q Y+ + E F ++ S + ++ + PK LE ++M Y AVG+LM TRP IA AV + R+ NPG H KA K+++YL T ++ + Y + + ++DSDF C+++R+S SG + +LA GAIS Sbjct: 260 EMSSMKCNDVWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYR-RTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAIS 606
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A438J629_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J629_VITVI) HSP 1 Score: 171 bits (434), Expect = 8.660e-47 Identity = 111/358 (31.01%), Postives = 181/358 (50.56%), Query Frame = 1 Query: 1 KEMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPEN----------------------PCMLKKIVDGEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEKTSRMPDMLGASALSNGGK------PKT-LEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 +EM+SM +NGVW+ + P+ + + K +++ K + G + +YK RLVA+ Q E + Y E SP+ +N S R+++A A D +L D + FL +IDE +Y+ PEN C+ K G ++++++V +IL + D ++ L +F +KDLGDA F +G + R+ L L Q Y+ + FG+ + G + ++ G K PK LE+K+M KF Y A+G+LM TRP I V + R+ NP H K ++++YL + +TY + + ++DSDF CL++RRS+S + MLA GA+S Sbjct: 3 EEMKSMKDNGVWDLVELPKCIKPIGCKWIFKTKQNSKGNIARYKARLVAKCFTQKEDIDYNETFSPISSNDSFRIIMALVAHYDLKLHQMDVKTVFLNGNIDETIYMVQPENFESNDSKQLVITSFGFKENTVDQCIYLKF-SGSKFIILVLYVDDILLASSDVGLLHETKRFLFSKFDMKDLGDASFVLGIQIYRDHPRGILGLSQKAYIDKVLSRFGMSNCAP-----GDTHVAKGDKFSLHQCPKNELEKKDMEKFPYASAIGSLMYAQVCTRPDIVYIVGMLGRYLSNPSIDHWKKAKRVMRYLQRIKNYMLTYR-RSSHLEIVGYSDSDFPGCLDSRRSISSYIFMLAGGAVS 353
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A438JMN5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JMN5_VITVI) HSP 1 Score: 174 bits (442), Expect = 8.800e-47 Identity = 117/376 (31.12%), Postives = 188/376 (50.00%), Query Frame = 1 Query: 1 KEMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETPEN---------PCMLKKI------------------------------------VDGEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEK-TSRMPDMLGASALSNGGKPKT-LEEKEMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 +E++SM +NGVW+ I P + V K +++ K G +E++K RLVA+G Q EG+ Y + SP+ S+R+++A A D EL D + AFL ++DE++Y+E PE C LKK V G + +I++V +IL + D ++ L F + D+G+A++ + + R+R L L Q Y+ + E F ++ +S + +L LS P+ +E ++M K Y AVG+LM T TRP I+ AV + R+ +PG H KA K+++YL T ++ +TY + ++DSD+G CL++ +S SG V MLA GAIS Sbjct: 15 EELKSMAHNGVWDLIELPNNCKPVGCKWVFKTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENILDQCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEANYVISIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYKRSE-QLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAIS 389
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Match: A0A2N9FUY1_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FUY1_FAGSY) HSP 1 Score: 174 bits (442), Expect = 1.810e-46 Identity = 114/345 (33.04%), Postives = 183/345 (53.04%), Query Frame = 1 Query: 1 KEMRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLRQIEGVHYTEKDSPMPTNASMRMLLATAAAKDGELRHFDAEQAFLEADIDEEMYIETP--------------ENPCMLKKIVDGEVEMVVIVHVSEILARAKDHAMMEWFATQLGGRFKLKDLGDADFYMGDHVTRNRKARELKLGQSMYVQSMAETFGVEKTSRMPD-MLGASALSNGGKPKTLEEK-EMTKFRYRKAVGALM*TATITRPGIACAVHAITRFCENPGPAHKKAVIKIVQYLLHTMEWGITYDGQRCGFRMEAFADSDFGACLNTRRSVSGGVLMLAKGAIS 987 +EM SM N VWE + P + K + + K DG +++YK RLVA+G Q EG+ Y + SP+ AS+R++L+ A +D EL D + AFL ++DEE+Y+ P E+ CM K + +++ ++V +IL D + L F++KD+G+A+F +G +TR+R + L L Q Y++ + E F + + + M LS PK EEK +M+K Y A+ +LM TRP I AV ++R+ NPGPAH +AV +I++YL T + + Y G R+ ++D+D+ + + R+S SG +L GA+S Sbjct: 93 EEMSSMDKNNVWELVDLPPGHKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKMIEEDHCMYLKRSKRSI-LILSLYVDDILLVGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIRSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCYHGG--DLRLTGYSDADWASDKDERKSTSGYAFILGGGAVS 434 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12386.1497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12386.1497.1 >prot_H-paniculata_contig12386.1497.1 ID=prot_H-paniculata_contig12386.1497.1|Name=mRNA_H-paniculata_contig12386.1497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp MRSMVNNGVWEQIARPQDMLVVRAKMLYERKASKDGEVEKYKCRLVAQGLback to top mRNA from alignment at H-paniculata_contig12386:3451..4569- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12386.1497.1 ID=mRNA_H-paniculata_contig12386.1497.1|Name=mRNA_H-paniculata_contig12386.1497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1119bp|location=Sequence derived from alignment at H-paniculata_contig12386:3451..4569- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12386:3451..4569- >mRNA_H-paniculata_contig12386.1497.1 ID=mRNA_H-paniculata_contig12386.1497.1|Name=mRNA_H-paniculata_contig12386.1497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at H-paniculata_contig12386:3451..4569- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |