mRNA_H-paniculata_contig12370.1493.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: D8LKL6_ECTSI (Fe-S-cluster oxidoreductase-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL6_ECTSI) HSP 1 Score: 126 bits (317), Expect = 4.160e-34 Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 1 LLEFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 L E+L DP E LY SMT +GWCKHFD+E+RACT++ DRPRFCRVET+TFG MYG++ DMD+FC++CC +QI VYG++ Sbjct: 154 LAEYLPDPEEFDLYMSMTGSDGWCKHFDKESRACTVYSDRPRFCRVETETFGSMYGVEPEDMDDFCSSCCNEQISDVYGAE 234
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: W7TMW6_9STRA (Uncharacterized protein family UPF0153 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMW6_9STRA) HSP 1 Score: 111 bits (277), Expect = 7.540e-28 Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 1 Query: 1 LLEFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGS 240 LL++ DP +LA Y SM ++GWC H+D+ RACT+FEDRP FCRVE TF MYG+ +MD+FCT+CC++QI VYG+ Sbjct: 165 LLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGT 244
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: UPI0019087D7A (YkgJ family cysteine cluster protein n=1 Tax=Sphaerospermopsis aphanizomenoides TaxID=459663 RepID=UPI0019087D7A) HSP 1 Score: 102 bits (254), Expect = 1.830e-26 Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 7 EFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 E+LS P E+ LY SM E+GWC +FD E R CTI+ DRPRFCRVE +TF DMYGI+ ++++F CC+ QI VYG + Sbjct: 26 EYLS-PEEMGLYLSMVGEDGWCVNFDHETRECTIYADRPRFCRVEAETFQDMYGIEPEELNDFAIDCCRQQIDCVYGDR 103
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: A0A1E5QE50_9CYAN (Fe-S cluster protein n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QE50_9CYAN) HSP 1 Score: 102 bits (253), Expect = 2.600e-26 Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 4 LEFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 LE +P EL++Y S+ E+GWC HFDQ+ R C+I+ DRPRFCRV+ D FGD+YGI+ ++++F CC++QI VYG + Sbjct: 24 LEDYLNPEELSVYLSLVGEDGWCIHFDQDTRQCSIYADRPRFCRVQQDVFGDLYGIEPEELNDFAIDCCREQIEGVYGER 103
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: K9TJ28_9CYAN (Putative Fe-S oxidoreductase n=4 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TJ28_9CYAN) HSP 1 Score: 100 bits (250), Expect = 1.100e-25 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 1 LLEFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 L E+LS P ELALY SM +GWC H DQ NR CTI++DRPRFCRV D F +MYGI+ ++DEF CC+ QI V+G + Sbjct: 29 LAEYLS-PEELALYLSMVGPDGWCIHLDQLNRECTIYDDRPRFCRVLPDVFEEMYGIEPEELDEFAIECCQQQIEAVHGDR 108
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: A0A6M0EPK4_9CYAN (YkgJ family cysteine cluster protein n=4 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6M0EPK4_9CYAN) HSP 1 Score: 99.4 bits (246), Expect = 3.010e-25 Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 1 Query: 4 LEFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 LE P EL LY SM E GWC HFD R C I++DRPRFCRV D FGDM+GI+ ++++F CC++ I +YG + Sbjct: 24 LEQYLSPQELELYLSMVGEGGWCMHFDHATRQCRIYQDRPRFCRVRADVFGDMFGIEPAELNDFAIECCREHISELYGDR 103
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: K9VVA6_9CYAN (Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9VVA6_9CYAN) HSP 1 Score: 99.0 bits (245), Expect = 4.270e-25 Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 1 Query: 7 EFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 ++LS P EL LY SM E GWC +FD R C I+EDRPRFCRVE D F D+YG++S +++EF CC+ QI VYG + Sbjct: 26 QYLS-PEELELYLSMVGEGGWCVNFDHIKRECRIYEDRPRFCRVEADVFADLYGVESEELNEFAIECCRQQIEGVYGDR 103
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: A0A3S1IFW9_ANAVA (Fe-S cluster protein n=5 Tax=Nostocaceae TaxID=1162 RepID=A0A3S1IFW9_ANAVA) HSP 1 Score: 99.0 bits (245), Expect = 4.270e-25 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 7 EFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 E+LS P EL LY SM + GWC +FDQ R CTI+E RPRFCRVE +TF DM+GI+ ++++F CC+ QI VYG + Sbjct: 26 EYLS-PEELGLYLSMVGDGGWCVNFDQTTRECTIYEHRPRFCRVEVETFQDMFGIEPEELNDFAIDCCRQQIEAVYGDR 103
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: UPI001686C0EB (YkgJ family cysteine cluster protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=UPI001686C0EB) HSP 1 Score: 98.6 bits (244), Expect = 7.570e-25 Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 22 PNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 P ELALY SM ++GWC HFD+ R C+++ DRPRFCRVE D F D++G++ ++++F ACC++QI VYG + Sbjct: 30 PTELALYLSMVGDDGWCVHFDKATRECSVYNDRPRFCRVEPDVFQDLFGVEPTELNDFAIACCQEQIEGVYGDR 103
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Match: UPI000D1F5BC5 (YkgJ family cysteine cluster protein n=1 Tax=Cyanothece sp. BG0011 TaxID=2082950 RepID=UPI000D1F5BC5) HSP 1 Score: 98.6 bits (244), Expect = 7.790e-25 Identity = 45/80 (56.25%), Postives = 52/80 (65.00%), Query Frame = 1 Query: 4 LEFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTFGDMYGIDSGDMDEFCTACCKDQIGLVYGSK 243 LE P EL Y S+ E+GWC HFD E R C I+E RPRFCRV+ DTF MY IDS D +EF CC+ QI VYG+K Sbjct: 28 LEDYLTPEELEHYLSLVGEDGWCIHFDHETRKCLIYEQRPRFCRVQPDTFEAMYDIDSSDFNEFAIDCCRQQIEGVYGAK 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12370.1493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12370.1493.1 >prot_H-paniculata_contig12370.1493.1 ID=prot_H-paniculata_contig12370.1493.1|Name=mRNA_H-paniculata_contig12370.1493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp LLEFLSDPNELALYKSMTLENGWCKHFDQENRACTIFEDRPRFCRVETDTback to top mRNA from alignment at H-paniculata_contig12370:4061..4303- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12370.1493.1 ID=mRNA_H-paniculata_contig12370.1493.1|Name=mRNA_H-paniculata_contig12370.1493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=243bp|location=Sequence derived from alignment at H-paniculata_contig12370:4061..4303- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12370:4061..4303- >mRNA_H-paniculata_contig12370.1493.1 ID=mRNA_H-paniculata_contig12370.1493.1|Name=mRNA_H-paniculata_contig12370.1493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at H-paniculata_contig12370:4061..4303- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |